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Conserved domains on  [gi|488390406|ref|WP_002459791|]
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MULTISPECIES: SA0632 family lipoprotein [Staphylococcus]

Protein Classification

septum formation initiator family protein( domain architecture ID 1903745)

septum formation initiator family protein similar to Bacillus subtilis cell division protein DivIC, which is required for vegetative and sporulation septum formation

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
FtsB super family cl42746
Cell division protein FtsB [Cell cycle control, cell division, chromosome partitioning];
5-65 1.07e-04

Cell division protein FtsB [Cell cycle control, cell division, chromosome partitioning];


The actual alignment was detected with superfamily member COG2919:

Pssm-ID: 442163 [Multi-domain]  Cd Length: 96  Bit Score: 39.09  E-value: 1.07e-04
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 488390406   5 LVLLLAAIFLLTACGKGNDEKQSLEQDIQKLEKEKKDLEKQEEKLKSDKEKYKSQRETLEK 65
Cdd:COG2919   11 LLLLAYLQYHLWFGDGGLLAYRELRQEIAELEAENAKLKARNAELEAEVADLKDGPDYIEE 71
 
Name Accession Description Interval E-value
FtsB COG2919
Cell division protein FtsB [Cell cycle control, cell division, chromosome partitioning];
5-65 1.07e-04

Cell division protein FtsB [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 442163 [Multi-domain]  Cd Length: 96  Bit Score: 39.09  E-value: 1.07e-04
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 488390406   5 LVLLLAAIFLLTACGKGNDEKQSLEQDIQKLEKEKKDLEKQEEKLKSDKEKYKSQRETLEK 65
Cdd:COG2919   11 LLLLAYLQYHLWFGDGGLLAYRELRQEIAELEAENAKLKARNAELEAEVADLKDGPDYIEE 71
PRK03992 PRK03992
proteasome-activating nucleotidase; Provisional
 23-63 7.85e-04

proteasome-activating nucleotidase; Provisional


Pssm-ID: 179699 [Multi-domain]  Cd Length: 389  Bit Score: 38.27  E-value: 7.85e-04
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|.
gi 488390406  23 DEKQSLEQDIQKLEKEKKDLEKQEEKLKSDKEKYKSQRETL 63
Cdd:PRK03992   8 ERNSELEEQIRQLELKLRDLEAENEKLERELERLKSELEKL 48
 
Name Accession Description Interval E-value
FtsB COG2919
Cell division protein FtsB [Cell cycle control, cell division, chromosome partitioning];
5-65 1.07e-04

Cell division protein FtsB [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 442163 [Multi-domain]  Cd Length: 96  Bit Score: 39.09  E-value: 1.07e-04
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 488390406   5 LVLLLAAIFLLTACGKGNDEKQSLEQDIQKLEKEKKDLEKQEEKLKSDKEKYKSQRETLEK 65
Cdd:COG2919   11 LLLLAYLQYHLWFGDGGLLAYRELRQEIAELEAENAKLKARNAELEAEVADLKDGPDYIEE 71
EnvC COG4942
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ...
 7-71 3.04e-04

Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 443969 [Multi-domain]  Cd Length: 377  Bit Score: 39.75  E-value: 3.04e-04
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 488390406   7 LLLAAIFLLTACGKGNDEKQSLEQDIQKLEKEKKDLEKQEEKLKSDKEKYKSQRETLEKEVEEMQ 71
Cdd:COG4942    4 LLLLALLLALAAAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALA 68
PRK03992 PRK03992
proteasome-activating nucleotidase; Provisional
 23-63 7.85e-04

proteasome-activating nucleotidase; Provisional


Pssm-ID: 179699 [Multi-domain]  Cd Length: 389  Bit Score: 38.27  E-value: 7.85e-04
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|.
gi 488390406  23 DEKQSLEQDIQKLEKEKKDLEKQEEKLKSDKEKYKSQRETL 63
Cdd:PRK03992   8 ERNSELEEQIRQLELKLRDLEAENEKLERELERLKSELEKL 48
PRK12704 PRK12704
phosphodiesterase; Provisional
 23-71 1.83e-03

phosphodiesterase; Provisional


Pssm-ID: 237177 [Multi-domain]  Cd Length: 520  Bit Score: 37.45  E-value: 1.83e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*....
gi 488390406  23 DEKQSLEQDIQKLEKEKKDLEKQEEKLKSDKEKYKSQRETLEKEVEEMQ 71
Cdd:PRK12704  93 QKEENLDRKLELLEKREEELEKKEKELEQKQQELEKKEEELEELIEEQL 141
COG4913 COG4913
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
15-71 3.06e-03

Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];


Pssm-ID: 443941 [Multi-domain]  Cd Length: 1089  Bit Score: 36.82  E-value: 3.06e-03
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 488390406   15 LTACGKGNDEKQSLEQDIQKLEKEKKDLEKQEEKLKSDKEKYKSQRETLEKEVEEMQ 71
Cdd:COG4913   677 LERLDASSDDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQ 733
PRK00409 PRK00409
recombination and DNA strand exchange inhibitor protein; Reviewed
 25-69 4.14e-03

recombination and DNA strand exchange inhibitor protein; Reviewed


Pssm-ID: 234750 [Multi-domain]  Cd Length: 782  Bit Score: 36.34  E-value: 4.14e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*
gi 488390406  25 KQSLEQDIQKLEKEKKDLEKQEEKLKSDKEKYKSQRETLEKEVEE 69
Cdd:PRK00409 529 ERELEQKAEEAEALLKEAEKLKEELEEKKEKLQEEEDKLLEEAEK 573
PRK13792 PRK13792
lysozyme inhibitor; Provisional
 1-40 4.78e-03

lysozyme inhibitor; Provisional


Pssm-ID: 106733  Cd Length: 127  Bit Score: 35.08  E-value: 4.78e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|.
gi 488390406   1 MKKGLVLLLAAI-FLLTACGKGNDEKQSLEQDIQKLEKEKK 40
Cdd:PRK13792   1 MKKALWLLLAAVpVVLVACGGSDDDKQTAQVDYLALPGDAK 41
CwlO1 COG3883
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ...
 22-95 8.29e-03

Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];


Pssm-ID: 443091 [Multi-domain]  Cd Length: 379  Bit Score: 35.58  E-value: 8.29e-03
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 488390406  22 NDEKQSLEQDIQKLEKEKKDLEKQEEKLKSDKEKYKSQRETLEKEVEEMQSTSSDDDKDNKEKTSDKSKEKSSQ 95
Cdd:COG3883  132 ADLLEELKADKAELEAKKAELEAKLAELEALKAELEAAKAELEAQQAEQEALLAQLSAEEAAAEAQLAELEAEL 205
PRK12704 PRK12704
phosphodiesterase; Provisional
 22-79 8.96e-03

phosphodiesterase; Provisional


Pssm-ID: 237177 [Multi-domain]  Cd Length: 520  Bit Score: 35.14  E-value: 8.96e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 488390406  22 NDEKQSLEQDIQKLEKEKKDLEKQEEKLKSDKEKYKSQRETLEKEVEEMQSTSSDDDK 79
Cdd:PRK12704  99 DRKLELLEKREEELEKKEKELEQKQQELEKKEEELEELIEEQLQELERISGLTAEEAK 156
Smc COG1196
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...
 22-71 9.70e-03

Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 440809 [Multi-domain]  Cd Length: 983  Bit Score: 35.30  E-value: 9.70e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|
gi 488390406  22 NDEKQSLEQDIQKLEKEKKDLEKQEEKLKSDKEKYKSQRETLEKEVEEMQ 71
Cdd:COG1196  238 EAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQ 287
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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