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Conserved domains on  [gi|488617457|ref|WP_002554306|]
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MULTISPECIES: flagellar hook-associated protein FlgK [Pseudomonas]

Protein Classification

flagellar hook-associated protein FlgK( domain architecture ID 11481496)

flagellar hook-associated protein FlgK forms the junction between the hook and the filament in the flagellum together with FlgL and provides a structural base where flagellin, a filament-forming protein, is inserted for the initiation of filament elongation

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
flgK PRK05683
flagellar hook-associated protein FlgK; Validated
 1-686 0e+00

flagellar hook-associated protein FlgK; Validated


:

Pssm-ID: 235558 [Multi-domain]  Cd Length: 676  Bit Score: 943.78  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457   1 MSLISIGLSGINASSAAINTIGNNTANVDTAGYSRQQVMTTASAQINIGlgVGYIGTGTTLSDVRRIYNSYLDAQLQTST 80
Cdd:PRK05683   1 MSLISIGLSGLGASQTALAVTGNNIANVDTAGYSRQQTVQTTKASQQSG--AGYIGTGTTLADVRRIYNSFLDTQLRTAT 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457  81 ALSADAVAYSGQASKTDTLLSDSATGVSTQLADFFTKMQGIATNATQSSDRSAFLTQASALSSRFNSVASQLSSQNDNVN 160
Cdd:PRK05683  79 SLNSDASAYLGQISQLDKLLSDSTTGISPALQRFFTALQTAAANPTDTAARQLLLTQAQGLSKRFNSLSSQLNQQNSNIN 158

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457 161 AQLTTFTKQVNELTTTLASLNKQITQAGAGNTTPNSLLDSRNETVRQLNGLVGVKVIENNGNYDIYTGTGQSLVSGGTSY 240
Cdd:PRK05683 159 SQLSAMTDQVNNLTTSIASYNKQIAQASASGATPNDLLDARDEAVRQLNELVGVTVVERDGNYDVYIGSGQPLVVGNTAN 238

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457 241 TMSATPSPADPLQYNVQIAYGQTKTDVTSVISGGSIGGLLRYRSDVLVPATNELGRAAMVLADQVNSQMSQGIDSKGNFG 320
Cdd:PRK05683 239 TLSVVPGPSDPSRYNVQLNRGSSTQDVTSVVSGGEIGGLLRYRSDVLDPAMNELGRLALVVADQINSQLGQGIDLNGNFG 318

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457 321 SSLYSNINSADAISQRSTGKTTNSAGSGNLDVTIGDTSKLTADDYEVTFSDASNFTVRRLPNGESVGTGALTDNPPKQFD 400
Cdd:PRK05683 319 SSLFGDINSADAISQRSLAKNGNSAGSGNLNVTIKDTSKLTTSDYEVTFTSATNYTVRRLSDGTDMGSFDLSDNPAPVID 398

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457 401 GFSVSLNGNALAAGDVFKVTPTRNGASGISVVLTDPKDIAAAAPLTATAGASNSGTGGFTQPVLNTKSDIYNSVQTSDLR 480
Cdd:PRK05683 399 GFSLSLNGGTLAAGDSFKVTPTRNAASDIETVLTDPKKLAFAAPLTAEAGSGNSGTGSITQPTLTSKLDIYDPAQTADLQ 478

                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457 481 NAIKDSAPMKLVMGAVSStGVQSYTLINASGAPVldqngsaVSGTIIQGQSNAVKLSIGYTDNTTTPAGKTAFEVQMTLS 560
Cdd:PRK05683 479 NAIKNSTPVKLVFGADSS-GPQSYTLVDAKGNAI-------GSGTIVPGQSNTLTLAVPMPDASGNPINDATFTFEMTIS 550

                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457 561 GSPLVNDTFSIGLTGAGSSDNRNALAVVGLQTAKTVGVTNGGVGTSLSGAYADLVSVVGTLAGQGKSDVTASAAVVAQAK 640
Cdd:PRK05683 551 GSPQAGDSFTVSFNGAGSSDNRNALALLGLQTKSTVGVGSGGKGTSLTDAYGKLVERVGTLASQARADATATAAVLKQAK 630

                        650       660       670       680
                 ....*....|....*....|....*....|....*....|....*.
gi 488617457 641 SARDSVSGVSLDEEAANLIKYQQYYTASSQIIKAAQTIFSTLINSL 686
Cdd:PRK05683 631 DSRDSLSGVSLDEEAANLIKFQQYYTASSQIIKAAQETFSTLINAL 676
 
Name Accession Description Interval E-value
flgK PRK05683
flagellar hook-associated protein FlgK; Validated
 1-686 0e+00

flagellar hook-associated protein FlgK; Validated


Pssm-ID: 235558 [Multi-domain]  Cd Length: 676  Bit Score: 943.78  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457   1 MSLISIGLSGINASSAAINTIGNNTANVDTAGYSRQQVMTTASAQINIGlgVGYIGTGTTLSDVRRIYNSYLDAQLQTST 80
Cdd:PRK05683   1 MSLISIGLSGLGASQTALAVTGNNIANVDTAGYSRQQTVQTTKASQQSG--AGYIGTGTTLADVRRIYNSFLDTQLRTAT 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457  81 ALSADAVAYSGQASKTDTLLSDSATGVSTQLADFFTKMQGIATNATQSSDRSAFLTQASALSSRFNSVASQLSSQNDNVN 160
Cdd:PRK05683  79 SLNSDASAYLGQISQLDKLLSDSTTGISPALQRFFTALQTAAANPTDTAARQLLLTQAQGLSKRFNSLSSQLNQQNSNIN 158

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457 161 AQLTTFTKQVNELTTTLASLNKQITQAGAGNTTPNSLLDSRNETVRQLNGLVGVKVIENNGNYDIYTGTGQSLVSGGTSY 240
Cdd:PRK05683 159 SQLSAMTDQVNNLTTSIASYNKQIAQASASGATPNDLLDARDEAVRQLNELVGVTVVERDGNYDVYIGSGQPLVVGNTAN 238

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457 241 TMSATPSPADPLQYNVQIAYGQTKTDVTSVISGGSIGGLLRYRSDVLVPATNELGRAAMVLADQVNSQMSQGIDSKGNFG 320
Cdd:PRK05683 239 TLSVVPGPSDPSRYNVQLNRGSSTQDVTSVVSGGEIGGLLRYRSDVLDPAMNELGRLALVVADQINSQLGQGIDLNGNFG 318

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457 321 SSLYSNINSADAISQRSTGKTTNSAGSGNLDVTIGDTSKLTADDYEVTFSDASNFTVRRLPNGESVGTGALTDNPPKQFD 400
Cdd:PRK05683 319 SSLFGDINSADAISQRSLAKNGNSAGSGNLNVTIKDTSKLTTSDYEVTFTSATNYTVRRLSDGTDMGSFDLSDNPAPVID 398

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457 401 GFSVSLNGNALAAGDVFKVTPTRNGASGISVVLTDPKDIAAAAPLTATAGASNSGTGGFTQPVLNTKSDIYNSVQTSDLR 480
Cdd:PRK05683 399 GFSLSLNGGTLAAGDSFKVTPTRNAASDIETVLTDPKKLAFAAPLTAEAGSGNSGTGSITQPTLTSKLDIYDPAQTADLQ 478

                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457 481 NAIKDSAPMKLVMGAVSStGVQSYTLINASGAPVldqngsaVSGTIIQGQSNAVKLSIGYTDNTTTPAGKTAFEVQMTLS 560
Cdd:PRK05683 479 NAIKNSTPVKLVFGADSS-GPQSYTLVDAKGNAI-------GSGTIVPGQSNTLTLAVPMPDASGNPINDATFTFEMTIS 550

                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457 561 GSPLVNDTFSIGLTGAGSSDNRNALAVVGLQTAKTVGVTNGGVGTSLSGAYADLVSVVGTLAGQGKSDVTASAAVVAQAK 640
Cdd:PRK05683 551 GSPQAGDSFTVSFNGAGSSDNRNALALLGLQTKSTVGVGSGGKGTSLTDAYGKLVERVGTLASQARADATATAAVLKQAK 630

                        650       660       670       680
                 ....*....|....*....|....*....|....*....|....*.
gi 488617457 641 SARDSVSGVSLDEEAANLIKYQQYYTASSQIIKAAQTIFSTLINSL 686
Cdd:PRK05683 631 DSRDSLSGVSLDEEAANLIKFQQYYTASSQIIKAAQETFSTLINAL 676
FlgK COG1256
Flagellar hook-associated protein FlgK [Cell motility];
1-684 8.42e-96

Flagellar hook-associated protein FlgK [Cell motility];


Pssm-ID: 440868 [Multi-domain]  Cd Length: 479  Bit Score: 304.11  E-value: 8.42e-96
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457   1 MSLISIGLSGINASSAAINTIGNNTANVDTAGYSRQQVMTTASAQINIGlgVGYIGTGTTLSDVRRIYNSYLDAQLQTST 80
Cdd:COG1256    3 FSALNIALSGLNAAQRALDVTSHNIANANTPGYSRQRVVLSAAGPTATG--AGQVGTGVRVTGIRRIRDEFLDAQLRSAN 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457  81 ALSADAVAYSGQASKTDTLLSD-SATGVSTQLADFFTKMQGIATNATQSSDRSAFLTQASALSSRFNSVASQLSSQNDNV 159
Cdd:COG1256   81 SDLGYAEARADALSQLEALLGEpSDTGLSTALDDFFNALQELASNPESSAARQAVLEAAQALADRFNSLSSQLQDLRADA 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457 160 NAQLTTFTKQVNELTTTLASLNKQITQAGAGNTTPNSLLDSRNETVRQLNGLVGVKVIEN-NGNYDIYTGTGQSLVSGGT 238
Cdd:COG1256  161 DSQIASTVDEINSLLSQIADLNKQIVKAEAGGQDANDLLDQRDQLLDELSELVGVTVVEQdDGTVNVSTGNGQTLVDGDT 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457 239 SYTMSATPSPADPLQYN-VQIAYGQTKTDVTSVISGGSIGGLLRYRSDVLVPATNELGRAAMVLADQVNSQMSQGIDSKG 317
Cdd:COG1256  241 ASELSFTPSAGDPGGLStVTLDDSGVPSDATSSITGGSLGGLLELRDETLPEYQAQLDELARGLADAFNAVHAQGYDLNG 320

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457 318 NFGSSLYSninsadaisqrstgkttnsagsgnldvtigdtskltaddyevtfsdasnftvrrlpngesvgtgaltdnppk 397
Cdd:COG1256  321 NPGGDLFD------------------------------------------------------------------------ 328

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457 398 qfdgFSVSLNGNALAAGDVFkvtptrnGASGISV---VLTDPKDIaaaapltatagasnsgtggftqpvlntksdiynsv 474
Cdd:COG1256  329 ----IDPSITGGTLTPFDTV-------GAGNISVnpaVIGDPSLL----------------------------------- 362

                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457 475 qtsdlrnaikdsapmklvmgAVSSTgvqsytlinasgapvldqngsavsgtiiqgqsnavklsigytdntttpagktafe 554
Cdd:COG1256  363 --------------------AAANS------------------------------------------------------- 367

                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457 555 vqmtlsgsplvndtfsiglTGAGSSDNRNALAVVGLQTAKTVGVTNGGvgTSLSGAYADLVSVVGTLAGQGKSDVTASAA 634
Cdd:COG1256  368 -------------------DGGGAGDNTNALALAALQDAKLVFDSGGS--GTLSDYYASLVSDLGVDAQQAKTEAEAQEA 426

                        650       660       670       680       690
                 ....*....|....*....|....*....|....*....|....*....|
gi 488617457 635 VVAQAKSARDSVSGVSLDEEAANLIKYQQYYTASSQIIKAAQTIFSTLIN 684
Cdd:COG1256  427 LLDQLENQRQSVSGVNLDEEMANLIKFQQAYQANARVITTADEMLDTLLN 476
flgK_ends TIGR02492
flagellar hook-associated protein FlgK; The flagellar hook-associated protein FlgK of ...
 2-318 7.44e-55

flagellar hook-associated protein FlgK; The flagellar hook-associated protein FlgK of bacterial flagella has conserved N- and C-terminal domains. The central region is highly variable in length and sequence, and often contains substantial runs of low-complexity sequence. This model is built from an alignment of FlgK sequences with the central region excised. Note that several other proteins of the flagellar apparatus also are homologous in the N- and C-terminal regions to FlgK, but are excluded from this model. [Cellular processes, Chemotaxis and motility]


Pssm-ID: 274162 [Multi-domain]  Cd Length: 323  Bit Score: 190.63  E-value: 7.44e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457    2 SLISIGLSGINASSAAINTIGNNTANVDTAGYSRQQVMTTASAqiNIGLGVGYIGTGTTLSDVRRIYNSYLDAQLQTSTA 81
Cdd:TIGR02492   1 SLLNIAKSGLSASQIALSVTSNNIANANTPGYSRQRAVLTAVP--AGGQGGKQIGTGVKVTSIRRIQDQFLDNQYRRANS 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457   82 LSADAVAYSGQASKTDTLLSD-SATGVSTQLADFFTKMQGIATNATQSSDRSAFLTQASALSSRFNSVASQLSSQNDNVN 160
Cdd:TIGR02492  79 SAGYADSRASGLSKIEQIFNDlDGSGLGTYLNNFFNALQELAKNPDSEALRQAVLESAQALANSFNQTSNELQDLRKGIN 158

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457  161 AQLTTFTKQVNELTTTLASLNKQITQAGAGNTTPNSLLDSRNETVRQLNGLVGVKVIEN-NGNYDIYTGTGQSLVSGGTS 239
Cdd:TIGR02492 159 AEIKSAVTEINSLLKQIASLNKEIKQVEASGQDANDLLDQRDLLLKELSQLIGISVSENeNGTVNVYTGSGQVLVDGATV 238

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457  240 YTMSATPSPADPLQ-----YNVQIAYGQTKTDVTSVISGGSIGGLLRYRSDVLVPATNELGRAAMVLADQVNSQMSQGID 314
Cdd:TIGR02492 239 TGSSTSPLTADTTGgkvggDGVYLPSGSSKVTISSDLQGGKLGGLLDLRDGVLPDLQSQLDQLAKTLADEFNEVHQSGAD 318


                  ....
gi 488617457  315 SKGN 318
Cdd:TIGR02492 319 LTGS 322
Flg_bbr_C pfam06429
Flagellar basal body rod FlgEFG protein C-terminal; This family consists of a number of ...
 612-684 1.43e-05

Flagellar basal body rod FlgEFG protein C-terminal; This family consists of a number of C-terminal domains of unknown function. This domain seems to be specific to flagellar basal-body rod and flagellar hook proteins in which pfam00460 is often present at the extreme N terminus.


Pssm-ID: 428939 [Multi-domain]  Cd Length: 74  Bit Score: 43.41  E-value: 1.43e-05
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 488617457  612 ADLVSVVGTLAGQGKSDVTASAAVVAQAKSARDSVSGVSLDEEAANLIKYQQYYTASSQIIKAAQTIFSTLIN 684
Cdd:pfam06429   1 AGLEKGGDNLFRETDGAPILGAGADGRVQQGYLEGSNVNPVEEMVNMIEAQRAYEANSKVIQTADEMLQTANQ 73
 
Name Accession Description Interval E-value
flgK PRK05683
flagellar hook-associated protein FlgK; Validated
 1-686 0e+00

flagellar hook-associated protein FlgK; Validated


Pssm-ID: 235558 [Multi-domain]  Cd Length: 676  Bit Score: 943.78  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457   1 MSLISIGLSGINASSAAINTIGNNTANVDTAGYSRQQVMTTASAQINIGlgVGYIGTGTTLSDVRRIYNSYLDAQLQTST 80
Cdd:PRK05683   1 MSLISIGLSGLGASQTALAVTGNNIANVDTAGYSRQQTVQTTKASQQSG--AGYIGTGTTLADVRRIYNSFLDTQLRTAT 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457  81 ALSADAVAYSGQASKTDTLLSDSATGVSTQLADFFTKMQGIATNATQSSDRSAFLTQASALSSRFNSVASQLSSQNDNVN 160
Cdd:PRK05683  79 SLNSDASAYLGQISQLDKLLSDSTTGISPALQRFFTALQTAAANPTDTAARQLLLTQAQGLSKRFNSLSSQLNQQNSNIN 158

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457 161 AQLTTFTKQVNELTTTLASLNKQITQAGAGNTTPNSLLDSRNETVRQLNGLVGVKVIENNGNYDIYTGTGQSLVSGGTSY 240
Cdd:PRK05683 159 SQLSAMTDQVNNLTTSIASYNKQIAQASASGATPNDLLDARDEAVRQLNELVGVTVVERDGNYDVYIGSGQPLVVGNTAN 238

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457 241 TMSATPSPADPLQYNVQIAYGQTKTDVTSVISGGSIGGLLRYRSDVLVPATNELGRAAMVLADQVNSQMSQGIDSKGNFG 320
Cdd:PRK05683 239 TLSVVPGPSDPSRYNVQLNRGSSTQDVTSVVSGGEIGGLLRYRSDVLDPAMNELGRLALVVADQINSQLGQGIDLNGNFG 318

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457 321 SSLYSNINSADAISQRSTGKTTNSAGSGNLDVTIGDTSKLTADDYEVTFSDASNFTVRRLPNGESVGTGALTDNPPKQFD 400
Cdd:PRK05683 319 SSLFGDINSADAISQRSLAKNGNSAGSGNLNVTIKDTSKLTTSDYEVTFTSATNYTVRRLSDGTDMGSFDLSDNPAPVID 398

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457 401 GFSVSLNGNALAAGDVFKVTPTRNGASGISVVLTDPKDIAAAAPLTATAGASNSGTGGFTQPVLNTKSDIYNSVQTSDLR 480
Cdd:PRK05683 399 GFSLSLNGGTLAAGDSFKVTPTRNAASDIETVLTDPKKLAFAAPLTAEAGSGNSGTGSITQPTLTSKLDIYDPAQTADLQ 478

                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457 481 NAIKDSAPMKLVMGAVSStGVQSYTLINASGAPVldqngsaVSGTIIQGQSNAVKLSIGYTDNTTTPAGKTAFEVQMTLS 560
Cdd:PRK05683 479 NAIKNSTPVKLVFGADSS-GPQSYTLVDAKGNAI-------GSGTIVPGQSNTLTLAVPMPDASGNPINDATFTFEMTIS 550

                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457 561 GSPLVNDTFSIGLTGAGSSDNRNALAVVGLQTAKTVGVTNGGVGTSLSGAYADLVSVVGTLAGQGKSDVTASAAVVAQAK 640
Cdd:PRK05683 551 GSPQAGDSFTVSFNGAGSSDNRNALALLGLQTKSTVGVGSGGKGTSLTDAYGKLVERVGTLASQARADATATAAVLKQAK 630

                        650       660       670       680
                 ....*....|....*....|....*....|....*....|....*.
gi 488617457 641 SARDSVSGVSLDEEAANLIKYQQYYTASSQIIKAAQTIFSTLINSL 686
Cdd:PRK05683 631 DSRDSLSGVSLDEEAANLIKFQQYYTASSQIIKAAQETFSTLINAL 676
flgK PRK06945
flagellar hook-associated protein FlgK; Validated
 1-684 3.53e-142

flagellar hook-associated protein FlgK; Validated


Pssm-ID: 235895 [Multi-domain]  Cd Length: 651  Bit Score: 429.82  E-value: 3.53e-142
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457   1 MSLISIGLSGINASSAAINTIGNNTANVDTAGYSRQQVMTTASAQINIGlgVGYIGTGTTLSDVRRIYNSYLDAQLQTST 80
Cdd:PRK06945   2 SSLLNIGLSGLNAAQWGLTTTGHNISNAATPGYSRQRVVQAEAGGQYTG--SGYLGQGVNVVTVKRQYSQYLSAQLNNAQ 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457  81 ALSADAVAYSGQASKTDTLLSDSATGVSTQLADFFTKMQGIATNATQSSDRSAFLTQASALSSRFNSVASQLSSQNDNVN 160
Cdd:PRK06945  80 AASSSLSTYYSQISQLNNYLADPTAGLSPAITSFFTGLQNVANNPSDPSARQTMLSNAQTLASQFNAAGQQLDQLRQSVN 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457 161 AQLTTFTKQVNELTTTLASLNKQITQAGAGN-TTPNSLLDSRNETVRQLNGLVGVKVIEN-NGNYDIYTGTGQSLVSGGT 238
Cdd:PRK06945 160 TQLTSSVTQINSYTKQIAQLNDQIAKAESSQgQPPNDLLDQRDQLVSELSKLVGVTVVQQdDGGYNVFVGNGQPLVVGNQ 239

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457 239 SYTMSATPSPADPLQYNVQIAYGQTKTDV--TSVISGGSIGGLLRYRSDVLVPATNELGRAAMVLADQVNSQMSQGIDSK 316
Cdd:PRK06945 240 SYQLTTVPSPSDPSRLTVAGYKPPGTTQElpDSSLTGGTLGGLLAFRSQTLDPAQNQLGRLAASLAAQFNAQNALGIDLN 319

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457 317 GNFGSSLYSNINSADAISQRSTGKTTnsagsgnLDVTIGDTSKLTADDYEVTFsDASNFTVRRLPNGESVGT-GALTDNP 395
Cdd:PRK06945 320 GNLGGDLFSVAGPTVYANANNTGSAT-------LTASITNASALTTSDYTLSY-DGTNYTLTRLSDGSVVGTaTSLPTPP 391

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457 396 PKQFDGFSVSLNGnALAAGDVFKVTPTRNGASGISVVLTDPKDIAAAAPLTATAGASNSGTGGFTQPVLNTKSDIynsvq 475
Cdd:PRK06945 392 PTTIDGLSLSLSG-TMNAGDSFLVQPTRNAANGFSVATTDGSAIAAASPVRASAGSTNTGTGAISQGSVSSGYPL----- 465

                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457 476 tsdlrnaikDSAPMKLVMGAVsstgvqSYTLINASGAPVLDQNGSAVSGTIIQGQSNAVKLSIGYTdNTTTPAGktafeV 555
Cdd:PRK06945 466 ---------PSGTTTLTYDAA------TGTLSGFPAGTTVTVAGTPPTSVTITPATTPVPYTSGAG-ISLVFNG-----V 524

                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457 556 QMTLSGSPLVNDTFSIGLTGAGSSDNRNALAVVGLQTAKTVgvtnGGVGTSLSGAYADLVSVVGTLAGQGKSDVTASAAV 635
Cdd:PRK06945 525 SVTLSGTPADGDTFTIGPNTGGTNDGRNALALAKLQNAKTL----DGGTATYTGAYAQLVNQVGNKASQLKVSSAAQTAL 600

                        650       660       670       680
                 ....*....|....*....|....*....|....*....|....*....
gi 488617457 636 VAQAKSARDSVSGVSLDEEAANLIKYQQYYTASSQIIKAAQTIFSTLIN 684
Cdd:PRK06945 601 LGQITAAQQSVSGVNLDEEAANLLRYQQAYQANAKVIQTASTLFDTLLG 649
flgK PRK08147
flagellar hook-associated protein FlgK; Validated
 1-684 5.80e-103

flagellar hook-associated protein FlgK; Validated


Pssm-ID: 236165 [Multi-domain]  Cd Length: 547  Bit Score: 325.09  E-value: 5.80e-103
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457   1 MSLISIGLSGINASSAAINTIGNNTANVDTAGYSRQqvmTTASAQINIGL-GVGYIGTGTTLSDVRRIYNSYLDAQLQTS 79
Cdd:PRK08147   2 SSLINTAMSGLNAAQAALNTVSNNISNYNVAGYTRQ---TTILAQAGSTLtAGGWIGNGVYVSGVQREYDAFITNQLRAA 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457  80 TALSADAVAYSGQASKTDTLLSDSATGVSTQLADFFTKMQGIATNATQSSDRSAFLTQASALSSRFNSVASQLSSQNDNV 159
Cdd:PRK08147  79 QTQSSGLTTRYEQMSKIDNLLSDSTNSLSTTMQDFFTSLQTLVSNAEDPAARQALIGKAEGLVNQFKTTDQYLRDQDKGV 158

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457 160 NAQLTTFTKQVNELTTTLASLNKQITQA--GAGNTTPNSLLDSRNETVRQLNGLVGVKVIENNGN-YDIYTGTGQSLVSG 236
Cdd:PRK08147 159 NTAIGSSVDQINNYAKQIASLNDQITRLtgVGAGASPNDLLDQRDQLVSELNQIVGVEVSVQDGGtYNITMANGYSLVQG 238

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457 237 GTSYTMSATPSPADPLQynVQIAYGQTKTDVT----SVISGGSIGGLLRYRSDVLVPATNELGRAAMVLADQVNSQMSQG 312
Cdd:PRK08147 239 STAYQLAAVPSSADPTR--TTVAYVDGTAGNIeipeKLLTTGSLGGLLTFRSQDLDQTRNQLGQLALAFADAFNTQHKAG 316

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457 313 IDSKGNFGSSLYSnINSADAISQrstgktTNSAGSGNLDVTIGDTSKLTADDYEVTFsDASNFTVRRLPNGESVGTGALT 392
Cdd:PRK08147 317 FDANGDAGEDFFS-IGKPAVLSN------SKNTGTASLTAEYTDASAVKATDYKISF-DGTNWQVTRLSDNTTFTVTPDA 388

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457 393 DNPPKQFDGFSVSLNGNAlAAGDVFKVTPTRNGASGISVVLTDPKDIAaaapltatagasnsgtggftqpvlntksdiyn 472
Cdd:PRK08147 389 NGKTLEFDGLKVTVTGTP-AANDSFTLKPVSDAIVNMDVLITDESKIA-------------------------------- 435

                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457 473 svqtsdlrnaikdsapmklvmgavsstgvqsytlinASGAPvldqngsavsgtiiqgqsnavklsigytdntttpagkta 552
Cdd:PRK08147 436 ------------------------------------MASEA--------------------------------------- 440

                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457 553 fevqmtlsgsplvndtfsigltGAGSSDNRNALAVVGLQTAKTVGVTnggvgTSLSGAYADLVSVVGTLAGQGKSDVTAS 632
Cdd:PRK08147 441 ----------------------DGGDSDNRNGQALLDLQNKKLVGGK-----KSFNDAYASLVSDVGNQTATLKTSSTTQ 493

                        650       660       670       680       690
                 ....*....|....*....|....*....|....*....|....*....|..
gi 488617457 633 AAVVAQAKSARDSVSGVSLDEEAANLIKYQQYYTASSQIIKAAQTIFSTLIN 684
Cdd:PRK08147 494 ANVVTQLTNQQQSVSGVNLDEEYGNLQRFQQYYLANAQVLQTASTLFDALLN 545
FlgK COG1256
Flagellar hook-associated protein FlgK [Cell motility];
1-684 8.42e-96

Flagellar hook-associated protein FlgK [Cell motility];


Pssm-ID: 440868 [Multi-domain]  Cd Length: 479  Bit Score: 304.11  E-value: 8.42e-96
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457   1 MSLISIGLSGINASSAAINTIGNNTANVDTAGYSRQQVMTTASAQINIGlgVGYIGTGTTLSDVRRIYNSYLDAQLQTST 80
Cdd:COG1256    3 FSALNIALSGLNAAQRALDVTSHNIANANTPGYSRQRVVLSAAGPTATG--AGQVGTGVRVTGIRRIRDEFLDAQLRSAN 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457  81 ALSADAVAYSGQASKTDTLLSD-SATGVSTQLADFFTKMQGIATNATQSSDRSAFLTQASALSSRFNSVASQLSSQNDNV 159
Cdd:COG1256   81 SDLGYAEARADALSQLEALLGEpSDTGLSTALDDFFNALQELASNPESSAARQAVLEAAQALADRFNSLSSQLQDLRADA 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457 160 NAQLTTFTKQVNELTTTLASLNKQITQAGAGNTTPNSLLDSRNETVRQLNGLVGVKVIEN-NGNYDIYTGTGQSLVSGGT 238
Cdd:COG1256  161 DSQIASTVDEINSLLSQIADLNKQIVKAEAGGQDANDLLDQRDQLLDELSELVGVTVVEQdDGTVNVSTGNGQTLVDGDT 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457 239 SYTMSATPSPADPLQYN-VQIAYGQTKTDVTSVISGGSIGGLLRYRSDVLVPATNELGRAAMVLADQVNSQMSQGIDSKG 317
Cdd:COG1256  241 ASELSFTPSAGDPGGLStVTLDDSGVPSDATSSITGGSLGGLLELRDETLPEYQAQLDELARGLADAFNAVHAQGYDLNG 320

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457 318 NFGSSLYSninsadaisqrstgkttnsagsgnldvtigdtskltaddyevtfsdasnftvrrlpngesvgtgaltdnppk 397
Cdd:COG1256  321 NPGGDLFD------------------------------------------------------------------------ 328

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457 398 qfdgFSVSLNGNALAAGDVFkvtptrnGASGISV---VLTDPKDIaaaapltatagasnsgtggftqpvlntksdiynsv 474
Cdd:COG1256  329 ----IDPSITGGTLTPFDTV-------GAGNISVnpaVIGDPSLL----------------------------------- 362

                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457 475 qtsdlrnaikdsapmklvmgAVSSTgvqsytlinasgapvldqngsavsgtiiqgqsnavklsigytdntttpagktafe 554
Cdd:COG1256  363 --------------------AAANS------------------------------------------------------- 367

                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457 555 vqmtlsgsplvndtfsiglTGAGSSDNRNALAVVGLQTAKTVGVTNGGvgTSLSGAYADLVSVVGTLAGQGKSDVTASAA 634
Cdd:COG1256  368 -------------------DGGGAGDNTNALALAALQDAKLVFDSGGS--GTLSDYYASLVSDLGVDAQQAKTEAEAQEA 426

                        650       660       670       680       690
                 ....*....|....*....|....*....|....*....|....*....|
gi 488617457 635 VVAQAKSARDSVSGVSLDEEAANLIKYQQYYTASSQIIKAAQTIFSTLIN 684
Cdd:COG1256  427 LLDQLENQRQSVSGVNLDEEMANLIKFQQAYQANARVITTADEMLDTLLN 476
flgK PRK12714
flagellar hook-associated protein FlgK; Provisional
 1-686 1.01e-81

flagellar hook-associated protein FlgK; Provisional


Pssm-ID: 183697 [Multi-domain]  Cd Length: 624  Bit Score: 271.44  E-value: 1.01e-81
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457   1 MSLISIGLSGINASSAAINTIGNNTANVDTAGYSRQQVMTTASAQINigLGVGYIGTGTTLSDVRRIYNSYLDAQLQTST 80
Cdd:PRK12714   1 MSIMSTGTSALIAFQRALSTVSHNVANINTEGYSRQRVEFATRTPTD--MGYAFVGNGAKITDVGRVADQLAISRLLDSG 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457  81 ALSADAVAYSGQASKTDTLLSDSATGVSTQLADFFTKMQGIATNATQSSDRSAFLTQASALSSRFNSVASQLSSQNDNVN 160
Cdd:PRK12714  79 GELSRLQQLSSLSNRVDALYSNTATNVAGLWSNFFDSTSALSSNASSTAERQSMLDSGNSLATRFKQLNGQMDSLSNEVN 158

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457 161 AQLTTFTKQVNELTTTLASLNKQITqAGAGNTTPNsLLDSRNETVRQLNGLVG-VKVIENNGNYDIYTGTGQSLVSGGTS 239
Cdd:PRK12714 159 SGLTSSVDEVNRLTQQIAKINGTIG-SSAQNAAPD-LLDQRDALVSKLVGYTGgTAVIQDGGFMNVFTAGGQALVVGTTA 236

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457 240 YTMSATPSPADPLQYNVQIAYGQTKTDVTSVISGGSIGGLLRYRSDVLVPATNELGRAAMVLADQVNSQMSQGIDSKGNF 319
Cdd:PRK12714 237 SKLTTVADPYQPTKLQVAMQTQGQNVSLSPSSLGGQIGGLLEFRSSVLEPTQAELGRLAVGMASSFNAGHSQGMDLYGAM 316

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457 320 GSSLYsNINSAdaisqRSTGKTTNSaGSGNLDVTIGDTSKLTADDYEVTFsDASNFTVRRLPNGESVG-TGALTDNPPKQ 398
Cdd:PRK12714 317 GGNFF-NIGSP-----TVAANPSNT-GTASLSASFSNLSAVDGQNVTLSF-DGTNWKATRADTGSAVPmTGTGTAADPLV 388

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457 399 FDGFSVSLNGNAlAAGDVFKVTPTRNGASGISVVLTDPKDIAAAAPLTATAGASNSGTGgftqpvlntksdIYNSVQTSD 478
Cdd:PRK12714 389 LNGVSMVVGGTP-ASGDKFLLQPTAGLAGSLSVAITDPSRIAAATPVKATATLANQGTG------------KISDVKVTN 455

                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457 479 LRNAikdsapmklvmgavsstgvqsyTLINASGAPVLDQNGSAVSGTIIQGqsnavklsigYTDNTTTPAGKTAFevqmT 558
Cdd:PRK12714 456 AQNP----------------------ALLTPSSIEFIDANQYTIDGAGPFA----------YTAGQTISANGWSF----A 499

                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457 559 LSGSPLVNDTFSIGLTGAGSSDNRNALAVVGLQTAKTVgvtNGGVGTsLSGAYADLVSVVGTLAGQGKSDVTASAAVVAQ 638
Cdd:PRK12714 500 LDGAPKAGDTFGVGPTGAGSSDNGNAKLLAKVDDAKAL---NGGTVT-LNGALSGLTTSVGSAARAANYSADAQKVINDQ 575

                        650       660       670       680
                 ....*....|....*....|....*....|....*....|....*...
gi 488617457 639 AKSARDSVSGVSLDEEAANLIKYQQYYTASSQIIKAAQTIFSTLINSL 686
Cdd:PRK12714 576 AQASRDSISGVNLDEEAANMLKLQQAYQAAAQMISTADTMFQAILGAV 623
flgK PRK08871
flagellar hook-associated protein FlgK; Validated
 3-684 2.02e-61

flagellar hook-associated protein FlgK; Validated


Pssm-ID: 181572 [Multi-domain]  Cd Length: 626  Bit Score: 216.63  E-value: 2.02e-61
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457   3 LISIGLSGINASSAAINTIGNNTANVDTAGYSRQQVMTTASAQINIGlGVGYiGTGTTLSDVRRIYNSYLDAQLQTSTAL 82
Cdd:PRK08871   5 LLNVGTQSVLTAQRQLNTTGHNISNVNTEGYSRQSVIQGTNDPRQFG-GSTY-GMGVHVENVRRSWDQFAVNELNLSTTN 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457  83 SADAVAYSGQASKTDTLLSDSATG-VSTQLADFFTKMQGIATNATQSSDRSAFLTQASALSSRFNSVASQLSSQNDNVNA 161
Cdd:PRK08871  83 LANKTDTEANLDMLSSMLSSVASKkIPENLNEWFDAVKTLADSPNDLGARKVVLEKAKLISQTLNDFHETVRQQKDVTNK 162

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457 162 QLTTFTKQVNELTTTLASLNKQITQagagntTP---NSLLDSRNETVRQLNGLVGVKVI--ENNGNYDIYTGTGQSLVSG 236
Cdd:PRK08871 163 KLDLGVERINQIALEIRDIHRLMMR------TPgphNDLMDQHEKLVKELSQYTKVTVTprKNAEGFNVHIGNGHTLVSG 236

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457 237 GTSYTMSATPSPADPLQYNVQIAYGQTKTDVTSVISGGSIGGLLRYRSDVLVPATNELGRAAMVLADQVNSQMSQGIDSK 316
Cdd:PRK08871 237 TEASQLKMIDGYPDPHQRRLAMVEGKGLKAIKADDIGGKLGALLDMRDEHIPYLMDELGRLATGFSSEVNTLQSQGLDLR 316

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457 317 GNFGSSLYSNINSADAISQRStgkTTNSAGSGNLDVTIGDTSKLTADDYEVTFsDASNFTVRRlPNGESVGTGALTDNPP 396
Cdd:PRK08871 317 GNVGGNLFTDVNSEVIARSRV---VTAPNSKADVAVFIDDISQLKGGEYALRY-DGSQYTVTK-PSGEQQSLDPDGNPSA 391

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457 397 KQFDGFSVSLnGNALAAGDVFKVTPTRNGASGISVVLTDPKDIAAAAPLTATAGAsnSGTGGFtqpvlntksdiyNSVQT 476
Cdd:PRK08871 392 FYLDGMRVEV-RNPPQAGERILLRPTRNGAAQIKLETNDAKKIAAQSYEASTTFA--QGKAKF------------KILQA 456

                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457 477 SDLRNaikdsapmklVMGAVSSTGVQsytlinasgAPVLDQNGSAVSgtiiQGQSnavklsigYTDNTTTPAGKTAFEvq 556
Cdd:PRK08871 457 GDLRE----------FEVIVSPTGDQ---------FAVTDTKGNILL----QPQP--------YPPKGPVTVGGTTFE-- 503

                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457 557 mtLSGSPLVNDTFSIGLTgAGSSDNRNALAVVGLQTAKtvgVTNGGVGTSLsgayaDLVSVVGTLAGQGKSDVTASAAV- 635
Cdd:PRK08871 504 --LTEGALANDKFTANLV-PSEGDNGNLRKMQNLQTDK---VMDDGESTII-----DLYHNLNTEVGLKKATATRLADVa 572

                        650       660       670       680       690
                 ....*....|....*....|....*....|....*....|....*....|....
gi 488617457 636 -----VAQAKSArdSVSGVSLDEEAANLIKYQQYYTASSQIIKAAQTIFSTLIN 684
Cdd:PRK08871 573 rlekeAAQSRVA--SISGVNLDEEAANMMKFQQAYMASSRIMQAANDTFNTILQ 624
flgK PRK12715
flagellar hook-associated protein FlgK; Provisional
 1-684 2.01e-59

flagellar hook-associated protein FlgK; Provisional


Pssm-ID: 183698 [Multi-domain]  Cd Length: 649  Bit Score: 211.52  E-value: 2.01e-59
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457   1 MSLISIGLSGINASSAAINTIGNNTANVDTAGYSRQQVMTTASAQINigLGVGYIGTGTTLSDVRRIYNSYLDAQLQTST 80
Cdd:PRK12715   1 MSILNIAYSGLNAFQRALDVTGNNIANFKTRGYSRQSIQFTPIASNR--YAGSYIGAGVSVSSIYRNVDQFANAQVRSTL 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457  81 ALSADAVAYSGQASKTDTLLSDSATGVSTQLADFFTKMQGIATNATQSSDRSAFLTQASALSSRFNSVASQLSSQNDNVN 160
Cdd:PRK12715  79 SYRTQYDAFYNQAIQIDKLLSQDGSSISVPLQTFFDSIGQLNSTPDNIATRGVVLKQSQLLAQQFNSLQTKLEEYERNST 158

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457 161 AQLTTFTKQVNELTTTLASLNKQITqagaGNTTPNSLLDSRNETVRQLNGLVGVKVIEN-NGNYDIYTGTGQSLVSGGTS 239
Cdd:PRK12715 159 LQVTESVKIINRITKELAEVNGKLL----GNNNIPELLDHRDELLKQLSGYTDLSIFDQgDGTISVGIASGDMLVAGTQQ 234

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457 240 YTMSATPSPADPLQYNVQIAYG-QTKTDVTSVISGGSIGGLLRYRSDVLVPATNELGRAAMVLADQVNSQMSQGIDSKGN 318
Cdd:PRK12715 235 RDLVVGTGKDSIFGTKIFLSSGgNNQVDITDRLTTGMLGGLIDYEKNVLGQASQLIGQMAIGLAQTFNAQHKLGMDMNSQ 314

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457 319 FGSSLYSNINSADAISQRSTGKTTNSaGSGNLDVTIGDTSKLTADDYEVTFSDASNFTVRRLPNGESVGTG-ALTDNPPK 397
Cdd:PRK12715 315 IGKDFFTDFNSPGQMLKRSTASADNS-GTAVLSVNISDISQVKLSDYDLIISDTGANELRLIRKSDGTSTTlTWSSSPPA 393

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457 398 Q------FDGFSVSLNG-NALAAGDVFKVTPTRNGASGISVVLTDPKDIAAAAPLTATAGASNSGTGGFT-QPVLNTKSd 469
Cdd:PRK12715 394 PpagqvvIDGMTITVNDlSQLANNDHYTLTPTRGAARDFALEIKDAYEIALASPVKTTASLNNTGQGQIIlGPVLNTAS- 472

                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457 470 iynsVQTSDLRNAIKDSapmklvmgavsstgvqSYTLINASGAPvldqngSAVSGTIIQGQSNAVKLSIGYTDNTTtpag 549
Cdd:PRK12715 473 ----VNKQFRIDFISDT----------------QYNLVNVTDST------TAGPFAFVPNTNNVIQIPDGITPSYS---- 522

                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457 550 ktafevqMTLSGSPLVNDTFSIGLTGAGSSDNRNALAVVGLQTAKTVgvTNGGvgTSLSGAYADLVSVVGTLAGQGKSDV 629
Cdd:PRK12715 523 -------VVLSGIPKSGDQFTTDYNTGGFGDNRNGLILGNIQQNKIF--SNGS--ETLFDRYGSLLAEVGGRTNQAKTSF 591

                        650       660       670       680       690
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 488617457 630 TASAAVVAQAKSARDSVSGVSLDEEAANLIKYQQYYTASSQIIKAAQTIFSTLIN 684
Cdd:PRK12715 592 ESADILHKQALDFQDSKSGVNLDEEGANLLVFQQAYQAAGKLMEISNQIMNLLFD 646
flgK_ends TIGR02492
flagellar hook-associated protein FlgK; The flagellar hook-associated protein FlgK of ...
 2-318 7.44e-55

flagellar hook-associated protein FlgK; The flagellar hook-associated protein FlgK of bacterial flagella has conserved N- and C-terminal domains. The central region is highly variable in length and sequence, and often contains substantial runs of low-complexity sequence. This model is built from an alignment of FlgK sequences with the central region excised. Note that several other proteins of the flagellar apparatus also are homologous in the N- and C-terminal regions to FlgK, but are excluded from this model. [Cellular processes, Chemotaxis and motility]


Pssm-ID: 274162 [Multi-domain]  Cd Length: 323  Bit Score: 190.63  E-value: 7.44e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457    2 SLISIGLSGINASSAAINTIGNNTANVDTAGYSRQQVMTTASAqiNIGLGVGYIGTGTTLSDVRRIYNSYLDAQLQTSTA 81
Cdd:TIGR02492   1 SLLNIAKSGLSASQIALSVTSNNIANANTPGYSRQRAVLTAVP--AGGQGGKQIGTGVKVTSIRRIQDQFLDNQYRRANS 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457   82 LSADAVAYSGQASKTDTLLSD-SATGVSTQLADFFTKMQGIATNATQSSDRSAFLTQASALSSRFNSVASQLSSQNDNVN 160
Cdd:TIGR02492  79 SAGYADSRASGLSKIEQIFNDlDGSGLGTYLNNFFNALQELAKNPDSEALRQAVLESAQALANSFNQTSNELQDLRKGIN 158

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457  161 AQLTTFTKQVNELTTTLASLNKQITQAGAGNTTPNSLLDSRNETVRQLNGLVGVKVIEN-NGNYDIYTGTGQSLVSGGTS 239
Cdd:TIGR02492 159 AEIKSAVTEINSLLKQIASLNKEIKQVEASGQDANDLLDQRDLLLKELSQLIGISVSENeNGTVNVYTGSGQVLVDGATV 238

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457  240 YTMSATPSPADPLQ-----YNVQIAYGQTKTDVTSVISGGSIGGLLRYRSDVLVPATNELGRAAMVLADQVNSQMSQGID 314
Cdd:TIGR02492 239 TGSSTSPLTADTTGgkvggDGVYLPSGSSKVTISSDLQGGKLGGLLDLRDGVLPDLQSQLDQLAKTLADEFNEVHQSGAD 318


                  ....
gi 488617457  315 SKGN 318
Cdd:TIGR02492 319 LTGS 322
flgK PRK07191
flagellar hook-associated protein FlgK; Validated
 1-324 1.54e-41

flagellar hook-associated protein FlgK; Validated


Pssm-ID: 180871 [Multi-domain]  Cd Length: 456  Bit Score: 157.29  E-value: 1.54e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457   1 MSLISIGLSGINASSAAINTIGNNTANVDTAGYSRQQVMTtaSAQINIGLGVGYIGTGTTLSDVRRIYNSYLDAQL--QT 78
Cdd:PRK07191   1 MNFIRTAFSGMQAAQAHLNATSMNIANMHTPGYSRQGVEQ--SAIGADGQGGVNAGNGVNVDGIRRLSQQYVVMQEwqAN 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457  79 STALSADAV-AYSGQASKtdtLLSDSATGVSTQLADFFTKMQGIATNATQSSDRSAFLTQASALSSRFNSVASQLSSQND 157
Cdd:PRK07191  79 SQQGYYDAGeQYFNALEL---VVGNKSTSLATGLNNFFSALSAATQLPDSPPMRQQVIESANAMALRFNNVNNFIVQQKK 155

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457 158 NVNAQLTTFTKQVNELTTTLASLNKQITQAGAGNTTPNSLLDSRNETVRQLNGLVGVKVIEN-NGNYDIYTGTGQSLVSG 236
Cdd:PRK07191 156 SIGQQRDATVKQINSLTRSIADYNQKILKNRSDGNNISDLLDQRDLQIKKLSGLIEVRVVQQeDGTYRVSVKNGQPLVNG 235

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457 237 GTSYTMSATPSPADplQYNVQIAYGQTKTDVTSVIsGGSIGGLLRYRSDVLVPATNELGRAAMVLADQVNSQMSQGIDSK 316
Cdd:PRK07191 236 AVAAELAVDTSSVG--TQKLTLHFSGATQGMNMSC-GGQLGGLNDYELTTLKPLQDSTQEMAKTVADKFNDQLTKGFDMN 312


                 ....*...
gi 488617457 317 GNFGSSLY 324
Cdd:PRK07191 313 GAPGKPLF 320
flgK PRK06665
flagellar hook-associated protein FlgK; Validated
 4-686 9.72e-39

flagellar hook-associated protein FlgK; Validated


Pssm-ID: 180650 [Multi-domain]  Cd Length: 627  Bit Score: 152.13  E-value: 9.72e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457   4 ISIGLSGINASSAAINTIGNNTANVDTAGYSRQQV-MTTA----SAQINIGLGVGYIGTGTTLSDVRRIYNSYLDAQLqt 78
Cdd:PRK06665   8 IEIGKRSLFAHKQALQTTGHNISNASTKGYSRQRVtMKTFdplyAPSLNRAEKPGQIGQGVEIQSIERIRDELLDSRI-- 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457  79 stALSADAVAYSGQASKTDTLLSD-----SATGVSTQLADFFTKMQGIATNATQSSDRSAFLTQASALSSRFNSVASQLS 153
Cdd:PRK06665  86 --IEESGRLGYWKTKDKYLSQLEQvynepEDQSLRTRLDDFWDSWQDLSNYPEGLAERQVVLERAQSLGERIHDRYRSLE 163

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457 154 SQNDNVNAQLTTFTKQVNELTTTLASLNKQITQAGAGNTTPNSLLDSRNETVRQLNGLVGVKVIENNGN-YDIYTGtGQS 232
Cdd:PRK06665 164 RIRDMANDEIEITVEEINNILRNIADLNEQIVKSQAMGDNPNDLLDRRDLLVDKLSSLIDVSIERSDPDeFMIHIG-GRH 242

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457 233 LVSGGTSYTMSATPSPADPLQYNVQiaygQTKTDVTSVISGGSIGGLLRYRSDVLVPATNELGRAAMVLADQVNSQMSQG 312
Cdd:PRK06665 243 LVQGNIANELDLEANPPNEGYWDIL----WSANGDPALLRTGKLGALIELRDTDIRDEINELDTLAINIVDLVNEIHRSG 318

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457 313 IDSKGNFGSSLYsninsadaiSQRStgKTTNSagSGNLDvTIGDtsklTADDYEVTFSDASNFTVRrlPNgESVG-TGAL 391
Cdd:PRK06665 319 FGLNGKTGRDFF---------TQEY--KLTNT--RGNYD-SNGD----GQFDSTHIFRVNGTNSID--PD-EKIGiSGTL 377

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457 392 TDNPPKQFDGFSVSLNGNALAAGDVFKVTptrNGASGISVVLTDPKdiaaaapltatagasnsgtggftQPVLN-TKSDi 470
Cdd:PRK06665 378 RFQASNKNGTVEIPYNATDTVNDVIKRIN---NSNAQVTAYLNHNN-----------------------KLVLKaTKAD- 430

                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457 471 yNSVQTSDLRNAIKDSAPMkLV--MGAVSSTGVQ-SYTLINASGAPVLDQNGSAVSGTIIQGQSNAVKLSIGYTDNTTTP 547
Cdd:PRK06665 431 -DDENPDFVIRHIEDSGDF-LVgyTGILNASGPEgAYDYQRIDTINKLQGNGADYTVSPLKHPASWIKVNDIIRNDPSNI 508

                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457 548 AgktafevqmtlSGSPLVNDTFSIGltgagssDNRNALAVVGLQTaKTVGVtngGVGTSLSGAYADLVSVVGTLAGQGKS 627
Cdd:PRK06665 509 A-----------AGIGDPTNPNGIG-------DGRAALAIASLRN-SPVMV---GKSKTFDDFFANTISNIGIKGETAEI 566

                        650       660       670       680       690
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 488617457 628 DVTASAAVVAQAKSARDSVSGVSLDEEAANLIKYQQYYTASSQIIKAAQTIFSTLINSL 686
Cdd:PRK06665 567 EKESQNQIMKELEDLRQSVSGVNLDEELANMIEFQHGYNASARFISVSNELLDTIINRM 625
flgK PRK07739
flagellar hook-associated protein FlgK; Validated
 6-334 2.67e-34

flagellar hook-associated protein FlgK; Validated


Pssm-ID: 236084 [Multi-domain]  Cd Length: 507  Bit Score: 137.45  E-value: 2.67e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457   6 IGLSGINASSAAINTIGNNTANVDTAGYSRQQVMTTASAQ-----INIGLGVGYIGTGTTLSDVRRIYNSYLDAQLQTST 80
Cdd:PRK07739  10 TARRGLFAQQAALYVTGHNIANANTPGYTRQRVNLAATPPyptpgMNRPKIPGQMGTGVEAGSVERIRDQFLDIQYRREN 89

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457  81 ALSADAVAYSGQASKTDTLLSD-SATGVSTQLADFFTKMQGIATNATQSSDRSAFLTQASALSSRFNSVASQLSSQNDNV 159
Cdd:PRK07739  90 NKLGYWETKADALSQMEDIMNEpSDTGLNKVLDQFWNSLQELSKNPENLGARSVVRQRAQALAETFNYLSQSLTDIQNDL 169

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457 160 NAQLTTFTKQVNELTTTLASLNKQITQAGAGNTTPNSLLDSRNETVRQLNGLVGVKVIEN----------NGNYDIY--- 226
Cdd:PRK07739 170 KSEIDVTVKEINSLASQISDLNKQIAKVEPNGYLPNDLYDQRDLLLDELSKIVNITVEYNksggnaledaEGTFRIDilg 249

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457 227 TGTGQSLVSG--GTSYTMSATPSPADPLQYNVQIAYGQTKTDVTSV---ISGGSIGGLLRYR--------SDVLVPAT-N 292
Cdd:PRK07739 250 GNGKGTLVDGkdSTVNELSVNKDDVTGLVTDLSLGGTTVSWDDTGQpvnPSSGKLKGLLEMYgymsgngeEKGLYPEMlN 329

                        330       340       350       360
                 ....*....|....*....|....*....|....*....|..
gi 488617457 293 ELGRAAMVLADQVNSQMSQGIDSKGNFGSSLYSNINSADAIS 334
Cdd:PRK07739 330 DLDKLAYTFATAFNEVHKQGYGLNGSTGIDFFDGTGDSTKGA 371
flgK PRK08471
flagellar hook-associated protein FlgK; Validated
 1-285 4.50e-27

flagellar hook-associated protein FlgK; Validated


Pssm-ID: 236270 [Multi-domain]  Cd Length: 613  Bit Score: 116.69  E-value: 4.50e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457   1 MSLiSIGLSGINASSAAINTIGNNTANVDTAGYSRQQVMTTASAQINIGlgVGYIGTGTTLSDVRRIYNSYLDAQLQTST 80
Cdd:PRK08471   6 SSL-NTGYTGLQAAQVMVDTTGNNISNASSEFYTRQRVVQSAQAALNTG--GGNVGTGTDIETIVRIHDEFVYSRYKKAS 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457  81 AlSADAVAYSGQ----ASKTDTLLSDsaTGVSTQLADFFTKMQGIATNATQSSDRSAFLTQASALSSRFNSVASQLSSQN 156
Cdd:PRK08471  83 T-ELEYTDYEFStlqeASQYFPDLDD--TGILKDLQDYFNAWNDFASNPKDSAQKQALAQKTETLTNNIKDTRERLDTLQ 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457 157 DNVNAQLTTFTKQVNELTTTLASLNKQI--TQAGAGNTTPNSLLDSRNETVRQLNGLVGVKVIEN--------------- 219
Cdd:PRK08471 160 KKVNEELKVTVDEINSLGKQIAEINKQIkeVEAGKTLKHANELRDKRDELELTLSKLVGANVFKSsiksdsrldttsadf 239

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 488617457 220 NGNYDIYTGtGQSLVSGGTSY--TMSATPSPAdplQYNvQIAY-GQ--TKTDVTSVISGGSIGGLLRYRSD 285
Cdd:PRK08471 240 GESYNLNIG-GFNIVDGSNFHplVLDEDENKG---GFN-QIYYeSDdfKRIDITDKISGGKVGALLDLRGR 305
flgK PRK07521
flagellar hook-associated protein FlgK; Validated
 1-290 2.83e-17

flagellar hook-associated protein FlgK; Validated


Pssm-ID: 236038 [Multi-domain]  Cd Length: 483  Bit Score: 85.37  E-value: 2.83e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457   1 MSL---ISIGLSGINASSAAINTIGNNTANVDTAGYSRQQVMTTASAQiniglGVGYIGtgttlsdVRRIYNSYLDAQLQ 77
Cdd:PRK07521   1 MSLssaLNTAQSGLTATSRQTSVVSRNIANAGTPGYSRREASLVSGPA-----GGQVVG-------ISRAQDPALLAQRL 68

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457  78 TSTALSADAVA-YSGQASKTDTL-LSDSATGVSTQLADFFTKMQGIATNATQSSDRSAFLTQASALSSRFNSVASQLSSQ 155
Cdd:PRK07521  69 LATSAAAAQDTlADGLERLASTVgDNDYEGSPSARLSDFQAALQTAASSPDNTTLAQAAVDAAQDLANSLNDASDAVQSA 148

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457 156 NDNVNAQLTTFTKQVNELTTTLASLNKQITQAGAGNTTPNSLLDSRNETVRQLNGLVGVKVIE-NNGNYDIYTGTGQSLV 234
Cdd:PRK07521 149 RADADAEIADSVDTLNDLLAQFEDANNAVVSGTATGRDASDALDQRDKLLKQISQIVGVTTVTrDNNDMALYTDGGVTLF 228

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457 235 SGG---TSYTMSATPSPADPLQyNVQI-AYGQTKTDVTSVISGGSIGGLLRYRsDVLVPA 290
Cdd:PRK07521 229 ETTprtVTFTPTATYTAGTTGN-AVYIdGVPLTGGSGVMPLAGGSLAALLQLR-DEIAPT 286
flgK PRK06799
flagellar hook-associated protein FlgK; Validated
 8-263 4.83e-17

flagellar hook-associated protein FlgK; Validated


Pssm-ID: 180699 [Multi-domain]  Cd Length: 431  Bit Score: 84.16  E-value: 4.83e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457   8 LSGINASSAAINTIGNNTANVDTAGYSRQQVMTTASAQINIGLGVGYIGTGTTLSDVRRIYNSYLDAQLQTSTALSADAV 87
Cdd:PRK06799  10 LSGMLAAQMGLQTTQQNLSNIHTPGYVRQMVNYGSVGASGGLLPEQQIGYGVQTLGVDRITDEVKTKQYNDQLSQLSYYN 89

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457  88 AYSGQASKTDTLLSDSATGVSTQLAD-FFTKMQGIATNATQSSDRSAFLTQASALSSRFNSVASQLSSQNDNVNAQLTTF 166
Cdd:PRK06799  90 YMNSALSRVESMVGTTGKNSLSSLMDgFFNAFREVAKNPEQANYYDTLISETGKFTSQLNRLAKGLDELEAQTTEDIEAH 169

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457 167 TKQVNELTTTLASLNKQITQAGAgnTTPNSLLDSRNETVRQLNGLVGVKVIENNGNYDIYTGT--GQSLVSGGTSYTMSA 244
Cdd:PRK06799 170 VNEFNRLAKSLAEANKKIGQAGT--QVPNQLLDERDRILTEMSKYANIEVSYESMNPNIASVRmnGVLTVNGQDTYPLQL 247

                        250
                 ....*....|....*....
gi 488617457 245 TPSpADPLQYNVqiaYGQT 263
Cdd:PRK06799 248 NKT-KEPMEFEI---YGSE 262
FhaB COG3210
Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, ...
 4-686 9.66e-07

Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 442443 [Multi-domain]  Cd Length: 1698  Bit Score: 52.46  E-value: 9.66e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457    4 ISIGLSGINASSAAINTIGNN---TANVDTAGYSRQQVMTTASAQINIGLGVGYIGTGTTLSDVRRIYNSYLDAQLQTST 80
Cdd:COG3210   798 ITADGTITAAGTTAINVTGSGgtiTINTATTGLTGTGDTTSGAGGSNTTDTTTGTTSDGASGGGTAGANSGSLAATAASI 877

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457   81 ALSADAVAYSGQASKTDTLLSDSATGVSTQLADFFTKMQGIATNATQSSDRSAFLTQASALSSRFNSVASQLSSQNDNVN 160
Cdd:COG3210   878 TVGSGGVATSTGTANAGTLTNLGTTTNAASGNGAVLATVTATGTGGGGLTGGNAAAGGTGAGNGTTALSGTQGNAGLSAA 957

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457  161 AQLTTFTKQVNELTTTLASLNKQITQAGAGNTTPNSLLDSRNETVRQLNGLVGVKVIENNGNYD--IYTGTGQSLVSGGT 238
Cdd:COG3210   958 SASDGAGDTGASSAAGSSAVGTSANSAGSTGGVIAATGILVAGNSGTTASTTGGSGAIVAGGNGvtGTTGTASATGTGTA 1037

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457  239 SYTMSATPSPADPLQYNVQIAYGQTKTDVTSVISGGSIGGLLRYRSDVLVPATNELGRAAMVLADQVNSQMSQGIDSKGN 318
Cdd:COG3210  1038 ATAGGQNGVGVNASGISGGNAAALTASGTAGTTGGTAASNGGGGTAQASGAGTTHTLGGITNGGATGTSGGTTTSTGGVT 1117

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457  319 FGSSLYSNINSADAISQRSTGKTTNSAGSGNLDVTIGDTSKLTADDYEVTFSDASNFTVRRLPNGESVGTGALTDNPPKQ 398
Cdd:COG3210  1118 ASKVGGTTTVGATGTSTASTEAAGAGTLTGLVAVSAVAGGASSASAGDTTAVAAATTTTTGSAINGGADSAATEGTAGTD 1197

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457  399 FDGFSVSLNGNALAAGDVFKVTPTRNGASGISVVLTDPKDIAAAAPLTATAGASNSGTGGFTQPVLNTKSDIYNSVQTSD 478
Cdd:COG3210  1198 LKGGDSTGGSTTTIGTTNVTTTTTLTASDTGNTTATGGSSAGQTGSFVAAGSASGTGDATTGATAGAVSNGATSTVAGNA 1277

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457  479 LRNAIKDSAPMKLVMGAVSSTGVQSYTLINASGAPVLDQNGSAVSGTIIQGQSNAVKLSIGYTDNTTTPAGKTAFEVQMT 558
Cdd:COG3210  1278 GATATGSTVDIGSTSATSAGGSLDTTGNTAGANGATVGTGIGGTTATGTAVAAVNSGGVNAGGGTINTTAANTGLNGGNG 1357

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457  559 LSGSPLVNDTFSIGLTGAGSSDNRNALAVVGLQTAKTVGVTNGGVGTSLSGAYADLVSVVGTLAGQGKSDVTASAAVVAQ 638
Cdd:COG3210  1358 ATDSAAGAGSGGAAGSLAATAGAGTVLTGAGNNTGAEGTNAGRDGGVTTSGTGVGNNGGVSGTTVAGTTGSSATTGTGGT 1437

                         650       660       670       680
                  ....*....|....*....|....*....|....*....|....*...
gi 488617457  639 AKSARDSVSGVSLDEEAANLIKYQQYYTASSQIIKAAQTIFSTLINSL 686
Cdd:COG3210  1438 GNTTGTSVAGAGGGNADASAINTGNASSLGAGGSTAGNAVGGAVIGGT 1485
FlgEFG_subfam TIGR03506
flagellar hook-basal body protein; This model encompasses three closely related flagellar ...
 2-67 1.84e-06

flagellar hook-basal body protein; This model encompasses three closely related flagellar proteins usually denoted FlgE, FlgF and FlgG. The names have often been mis-assigned, however. Three equivalog models, TIGR02489, TIGR02490 and TIGR02488, respectively, separate the individual forms into three genome-context consistent groups. The major differences between these genes are architectural, with variable central sections between relatively conserved N- and C-terminal domains. More distantly related are two other flagellar apparatus familis, FlgC (TIGR01395) which consists of little else but the N-and C-terminal domains and FlgK (TIGR02492) with a substantial but different central domain.


Pssm-ID: 274616 [Multi-domain]  Cd Length: 231  Bit Score: 49.56  E-value: 1.84e-06
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 488617457    2 SLISIGLSGINASSAAINTIGNNTANVDTAGYsRQQVMTTASAQINIGLGVGYIGTGTTLSDVRRI 67
Cdd:TIGR03506   1 MALYTALSGLNAQSSALDVIANNIANANTTGF-KRSRAEFQDLLSQSVSGSGQVGGGVRTSGVATD 65
FhaB COG3210
Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, ...
 2-634 7.69e-06

Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 442443 [Multi-domain]  Cd Length: 1698  Bit Score: 49.38  E-value: 7.69e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457    2 SLISIGLSGINASSAAINTIGNNTANVDTAGYSRQQVMTTASAQINIGLGVGYIGTGTTLSDVRRIYNSYLDAQLQTSTA 81
Cdd:COG3210   144 GGTTTGNTVLSTSGAGNNTNTNNSSSGTNIGNSIPTTGGSLNVVAANPTGVTGVGGALINATAGVLANAGGGTAGGVASA 223

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457   82 LSADAVAYSGQASKTDTLLSDSATGVSTQLADFFTKMQGIATNATQSSDRSAFLTQASALSSRFNSVASQLSSQNDNVNA 161
Cdd:COG3210   224 NSTLTGGVVAAGTGAGVISTGGTDISSLSVAAGAGTGGAGGTGNAGNTTIGTTVTGTNATGSNTAGASSGDTTTNGTSSV 303

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457  162 QLTTFTKQVNELTTTLASLNKQITQAGAGNTTPNSLLDSRNETVRQLNGLVGVKVIENNGNYDIYTGTGQSLVSGGTSYT 241
Cdd:COG3210   304 TGAGGTGVLGGGTAAGITTTNTVGGNGDGNNTTANSGAGLVSGGTGGNNGTTGTGAGSGLTGTGNGGGLTTAGAGTVAST 383

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457  242 MSATPSPADPLQYNVQIAYGQTKTDVTSVISGGSIGGLLRYRSDVLVPATNELGRAAMVLADQVNSQMSQGIDSKGNFGS 321
Cdd:COG3210   384 VGTATASTGNASSTTVLGSGSLATGNTGTTIAGNGGSANAGGFTTTGGVLGITGNGTVTGGTIGGLTGSGTTNGAGLSGN 463

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457  322 SLYSNINSADAISQRSTGKTTNSAGSGNLDVTIGDTSKLTADDYEVTFSDASNFTVRRLPNGESVGTGALTDNPPKQFDG 401
Cdd:COG3210   464 TDVSGTGTVTNSAGNTTSATTLAGGGIGTVTTNATISNNAGGDANGIATGLTGITAGGGGGGNATSGGTGGDGTTLSGSG 543

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457  402 FSVSLNGNALAAGDVFKVTPTRNGASGISVVLTDPKDIAAAAPLTATAGASNSGTGGFTQPVLNTKSDIYNSVQTSDLRN 481
Cdd:COG3210   544 LTTTVSGGASGTTAASGSNTANTLGVLAATGGTSNATTAGNSTSATGGTGTNSGGTVLSIGTGSAGATGTITLGAGTSGA 623

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457  482 AIKDSAPMKLVMGAVSSTGVQSYTLINASGAPVLDQNGSAVSGTIIQGQSNAVKLSIGYTDNTTTPAGKTAFEVQMTLSG 561
Cdd:COG3210   624 GANATGGGAGLTGSAVGAALSGTGSGTTGTASANGSNTTGVNTAGGTGGGTTGTVTSGATGGTTGTTLNAATGGTLNNAG 703

                         570       580       590       600       610       620       630
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 488617457  562 SPLVNDTFSIGLTG-AGSSDNRNALAVVGLQTAKTVGVTNGGVGTSLSGAYADLVSVVGTLAGQGKSDVTASAA 634
Cdd:COG3210   704 NTLTISTGSITVTGqIGALANANGDTVTFGNLGTGATLTLNAGVTITSGNAGTLSIGLTANTTASGTTLTLANA 777
flgE PRK05682
flagellar hook protein FlgE; Validated
 1-69 8.89e-06

flagellar hook protein FlgE; Validated


Pssm-ID: 235557 [Multi-domain]  Cd Length: 407  Bit Score: 48.68  E-value: 8.89e-06
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 488617457   1 MSLiSIGLSGINASSAAINTIGNNTANVDTAGYSRQQVMTTASAQINIGLGVGYIGTGTTLSDVRRIYN 69
Cdd:PRK05682   1 MSF-NTAVSGLNAASNRLDVIGNNIANANTTGFKSSRAEFADLYANSAGTNPTQVGSGVKVAGVAQQFS 68
Flg_bbr_C pfam06429
Flagellar basal body rod FlgEFG protein C-terminal; This family consists of a number of ...
 612-684 1.43e-05

Flagellar basal body rod FlgEFG protein C-terminal; This family consists of a number of C-terminal domains of unknown function. This domain seems to be specific to flagellar basal-body rod and flagellar hook proteins in which pfam00460 is often present at the extreme N terminus.


Pssm-ID: 428939 [Multi-domain]  Cd Length: 74  Bit Score: 43.41  E-value: 1.43e-05
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 488617457  612 ADLVSVVGTLAGQGKSDVTASAAVVAQAKSARDSVSGVSLDEEAANLIKYQQYYTASSQIIKAAQTIFSTLIN 684
Cdd:pfam06429   1 AGLEKGGDNLFRETDGAPILGAGADGRVQQGYLEGSNVNPVEEMVNMIEAQRAYEANSKVIQTADEMLQTANQ 73
FlgE COG1749
Flagellar hook protein FlgE [Cell motility];
1-67 1.56e-05

Flagellar hook protein FlgE [Cell motility];


Pssm-ID: 441355 [Multi-domain]  Cd Length: 414  Bit Score: 47.86  E-value: 1.56e-05
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 488617457   1 MSLiSIGLSGINASSAAINTIGNNTANVDTAGYSRQQVmTTAS--AQINIGLGVGYIGTGTTLSDVRRI 67
Cdd:COG1749    3 MSF-NTGVSGLNAASTALDVIGNNIANSNTVGFKSSRA-EFADlvAQSLSGANPTQVGGGVRVASVAQI 69
FlgG COG4786
Flagellar basal body rod protein FlgG [Cell motility];
6-68 1.06e-03

Flagellar basal body rod protein FlgG [Cell motility];


Pssm-ID: 443816 [Multi-domain]  Cd Length: 260  Bit Score: 41.34  E-value: 1.06e-03
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 488617457   6 IGLSGINASSAAINTIGNNTANVDTAGYSRQQVM---------------TTASAQINIGLgvgYIGTGTTLSDVRRIY 68
Cdd:COG4786    3 TAASGMLAQQTRLDVISNNLANVNTTGFKRDRAVfedllyqlirrpgapSSQGTQTPVGL---QLGTGVRVAATQTDF 77
flgK PRK06799
flagellar hook-associated protein FlgK; Validated
 521-683 2.51e-03

flagellar hook-associated protein FlgK; Validated


Pssm-ID: 180699 [Multi-domain]  Cd Length: 431  Bit Score: 41.02  E-value: 2.51e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457 521 AVSGTIIQGQSNAVKLSI-------GYTDNTTTPAGKTAFEVQMTLSGSPLVNDTFSIGLTGAGSSDNRNALAVVGLQTA 593
Cdd:PRK06799 257 EIYGSEIPLPSGAIISAIdtkakikSYKKNLEELMSSLKKAVNTVMGKSFFVGDSAKKWKLNPEFAKDVSKMKISAETAN 336

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457 594 KTVGVTNGGV--GTSLSGAYADLVSVVGTLAGQGKSDVTASAAVVAQAKSARDSVSGVSLDEEAANLIKYQQYYTASSQI 671
Cdd:PRK06799 337 KLAAITDDKYkeGLSYKQALDQFIVGVASDKSAVNAYQKIHTDLLEGIQQEKMSLEGVNMEEEMVNLMAFQKYFVANSKA 416

                        170
                 ....*....|..
gi 488617457 672 IKAAQTIFSTLI 683
Cdd:PRK06799 417 ITTMNEVFDSLF 428
FhaB COG3210
Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, ...
 2-685 2.59e-03

Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 442443 [Multi-domain]  Cd Length: 1698  Bit Score: 41.29  E-value: 2.59e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457    2 SLISIGLSGINASSAAINTIGNNTANVDTAGYSRQQVMTTASAQINIGLGVGYIGTGTTLSDVRRIYNSYLDAQLQTSTA 81
Cdd:COG3210   316 TAAGITTTNTVGGNGDGNNTTANSGAGLVSGGTGGNNGTTGTGAGSGLTGTGNGGGLTTAGAGTVASTVGTATASTGNAS 395

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457   82 LSADAVAYSGQASKTDTLLSDSATGVSTQLADFFTKMQGIATNATQSSDRSAFLTQASALSSRFNSVASQLSSQNDNVNA 161
Cdd:COG3210   396 STTVLGSGSLATGNTGTTIAGNGGSANAGGFTTTGGVLGITGNGTVTGGTIGGLTGSGTTNGAGLSGNTDVSGTGTVTNS 475

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457  162 QLTTFTKQVNELTTTLASLNKQITQAGAGNTTPNSLLDSRNETVRQLNGLVGVKVIENNGNYDIYTGTGQSLVSGGTSYT 241
Cdd:COG3210   476 AGNTTSATTLAGGGIGTVTTNATISNNAGGDANGIATGLTGITAGGGGGGNATSGGTGGDGTTLSGSGLTTTVSGGASGT 555

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457  242 MSATPSPADPLQYNVQIAYGQTKTDVTSVISGGSIGGLLRYRSDVLVPATNELGRAAMVLADQVNSQMSQGIDSKGNFGS 321
Cdd:COG3210   556 TAASGSNTANTLGVLAATGGTSNATTAGNSTSATGGTGTNSGGTVLSIGTGSAGATGTITLGAGTSGAGANATGGGAGLT 635

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457  322 SLYSNINSADAISQRSTGKTTNSAGSGNLDVTIGDTSKLTADDYEVTFSDASNFTVRRLPNGESVGTGALTDNppkQFDG 401
Cdd:COG3210   636 GSAVGAALSGTGSGTTGTASANGSNTTGVNTAGGTGGGTTGTVTSGATGGTTGTTLNAATGGTLNNAGNTLTI---STGS 712

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457  402 FSVSLNGNALAAGDVFKVTpTRNGASGISVVLTdpkdiaaaapltaTAGASNSGTGGFTQPVLNTKSDIYNSVQTSDLRN 481
Cdd:COG3210   713 ITVTGQIGALANANGDTVT-FGNLGTGATLTLN-------------AGVTITSGNAGTLSIGLTANTTASGTTLTLANAN 778

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457  482 AIKDSAPMKLVMGAVSSTGVQSYTLINASGAPVLDQNGSAVSGTIIQGQSNAVKLSIGYTDNTTTPAGKTAFEVQMTLSG 561
Cdd:COG3210   779 GNTSAGATLDNAGAEISIDITADGTITAAGTTAINVTGSGGTITINTATTGLTGTGDTTSGAGGSNTTDTTTGTTSDGAS 858

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488617457  562 SPLVNDTFSIGLTGAGSSDNRNALAVVGLQTAKTVGVTNGGVGTSLSGAYADLVSVVGTLAGQGKSDVTASAAVVAQAKS 641
Cdd:COG3210   859 GGGTAGANSGSLAATAASITVGSGGVATSTGTANAGTLTNLGTTTNAASGNGAVLATVTATGTGGGGLTGGNAAAGGTGA 938

                         650       660       670       680
                  ....*....|....*....|....*....|....*....|....
gi 488617457  642 ARDSVSGVSLDEEAANLIKYQQYYTASSQIIKAAQTIFSTLINS 685
Cdd:COG3210   939 GNGTTALSGTQGNAGLSAASASDGAGDTGASSAAGSSAVGTSAN 982
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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