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Conserved domains on  [gi|488978444|ref|WP_002889297|]
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MULTISPECIES: type I methionyl aminopeptidase [Klebsiella]

Protein Classification

methionyl aminopeptidase( domain architecture ID 10012537)

methionyl aminopeptidase catalyzes the hydrolytic removal of N-terminal methionine residues

EC:  3.4.11.18
Gene Ontology:  GO:0070006

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PRK05716 PRK05716
methionine aminopeptidase; Validated
1-254 1.26e-170

methionine aminopeptidase; Validated


:

Pssm-ID: 235576 [Multi-domain]  Cd Length: 252  Bit Score: 470.77  E-value: 1.26e-170
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488978444   1 MAISIKTSEDIEKMRVAGRLAAEVLEMIEPYVKPGVSTGELDRICNDYIVNeQKAISACLGYHGYPKSVCISVNEVVCHG 80
Cdd:PRK05716   1 MAITIKTPEEIEKMRVAGRLAAEVLDEIEPHVKPGVTTKELDRIAEEYIRD-QGAIPAPLGYHGFPKSICTSVNEVVCHG 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488978444  81 IPDDgKLLKDGDIVNIDVTVIKDDFHGDTSKMFIVGKPTILGERLCRITQESLYLALRMVKPGINLRTIGAAIQKFVEAE 160
Cdd:PRK05716  80 IPSD-KVLKEGDIVNIDVTVIKDGYHGDTSRTFGVGEISPEDKRLCEVTKEALYLGIAAVKPGARLGDIGHAIQKYAEAE 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488978444 161 GFSVVREYCGHGIGRGFHEEPQVLHYDSPETNVVLKPGMTFTIEPMVNAGKKEIRSMKDGWTVKTKDRSLSAQYEHTIVV 240
Cdd:PRK05716 159 GFSVVREYCGHGIGRKFHEEPQIPHYGAPGDGPVLKEGMVFTIEPMINAGKREVKTLKDGWTVVTKDGSLSAQYEHTVAV 238
                        250
                 ....*....|....
gi 488978444 241 TDNGCEILTLRKDD 254
Cdd:PRK05716 239 TEDGPEILTLRPEE 252
 
Name Accession Description Interval E-value
PRK05716 PRK05716
methionine aminopeptidase; Validated
1-254 1.26e-170

methionine aminopeptidase; Validated


Pssm-ID: 235576 [Multi-domain]  Cd Length: 252  Bit Score: 470.77  E-value: 1.26e-170
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488978444   1 MAISIKTSEDIEKMRVAGRLAAEVLEMIEPYVKPGVSTGELDRICNDYIVNeQKAISACLGYHGYPKSVCISVNEVVCHG 80
Cdd:PRK05716   1 MAITIKTPEEIEKMRVAGRLAAEVLDEIEPHVKPGVTTKELDRIAEEYIRD-QGAIPAPLGYHGFPKSICTSVNEVVCHG 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488978444  81 IPDDgKLLKDGDIVNIDVTVIKDDFHGDTSKMFIVGKPTILGERLCRITQESLYLALRMVKPGINLRTIGAAIQKFVEAE 160
Cdd:PRK05716  80 IPSD-KVLKEGDIVNIDVTVIKDGYHGDTSRTFGVGEISPEDKRLCEVTKEALYLGIAAVKPGARLGDIGHAIQKYAEAE 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488978444 161 GFSVVREYCGHGIGRGFHEEPQVLHYDSPETNVVLKPGMTFTIEPMVNAGKKEIRSMKDGWTVKTKDRSLSAQYEHTIVV 240
Cdd:PRK05716 159 GFSVVREYCGHGIGRKFHEEPQIPHYGAPGDGPVLKEGMVFTIEPMINAGKREVKTLKDGWTVVTKDGSLSAQYEHTVAV 238
                        250
                 ....*....|....
gi 488978444 241 TDNGCEILTLRKDD 254
Cdd:PRK05716 239 TEDGPEILTLRPEE 252
Map COG0024
Methionine aminopeptidase [Translation, ribosomal structure and biogenesis];
3-254 1.34e-163

Methionine aminopeptidase [Translation, ribosomal structure and biogenesis];


Pssm-ID: 439795 [Multi-domain]  Cd Length: 250  Bit Score: 452.92  E-value: 1.34e-163
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488978444   3 ISIKTSEDIEKMRVAGRLAAEVLEMIEPYVKPGVSTGELDRICNDYIVnEQKAISACLGYHGYPKSVCISVNEVVCHGIP 82
Cdd:COG0024    1 IEIKTPEEIEKMREAGRIVAEVLDELAEAVKPGVTTLELDRIAEEFIR-DHGAIPAFLGYYGFPKSICTSVNEVVVHGIP 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488978444  83 DDgKLLKDGDIVNIDVTVIKDDFHGDTSKMFIVGKPTILGERLCRITQESLYLALRMVKPGINLRTIGAAIQKFVEAEGF 162
Cdd:COG0024   80 SD-RVLKDGDIVNIDVGAILDGYHGDSARTFVVGEVSPEARRLVEVTEEALYAGIAAAKPGNRLGDIGHAIQSYAESNGY 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488978444 163 SVVREYCGHGIGRGFHEEPQVLHYDSPETNVVLKPGMTFTIEPMVNAGKKEIRSMKDGWTVKTKDRSLSAQYEHTIVVTD 242
Cdd:COG0024  159 SVVREFVGHGIGREMHEEPQVPNYGRPGRGPRLKPGMVLAIEPMINAGTPEVKVLDDGWTVVTKDGSLSAQFEHTVAVTE 238
                        250
                 ....*....|..
gi 488978444 243 NGCEILTLRKDD 254
Cdd:COG0024  239 DGPEILTLPDGG 250
met_pdase_I TIGR00500
methionine aminopeptidase, type I; Methionine aminopeptidase is a cobalt-binding enzyme. ...
3-251 1.35e-143

methionine aminopeptidase, type I; Methionine aminopeptidase is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. This model describes type I. The role of this protein in general is to produce the mature form of cytosolic proteins by removing the N-terminal methionine. [Protein fate, Protein modification and repair]


Pssm-ID: 129591 [Multi-domain]  Cd Length: 247  Bit Score: 402.50  E-value: 1.35e-143
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488978444    3 ISIKTSEDIEKMRVAGRLAAEVLEMIEPYVKPGVSTGELDRICNDYIVNEQkAISACLGYHGYPKSVCISVNEVVCHGIP 82
Cdd:TIGR00500   1 ISLKSPDEIEKIRKAGRLAAEVLEELEREVKPGVSTKELDRIAKDFIEKHG-AKPAFLGYYGFPGSVCISVNEVVIHGIP 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488978444   83 DDgKLLKDGDIVNIDVTVIKDDFHGDTSKMFIVGKPTILGERLCRITQESLYLALRMVKPGINLRTIGAAIQKFVEAEGF 162
Cdd:TIGR00500  80 DK-KVLKDGDIVNIDVGVIYDGYHGDTAKTFLVGKISPEAEKLLECTEESLYKAIEEAKPGNRIGEIGAAIQKYAEAKGF 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488978444  163 SVVREYCGHGIGRGFHEEPQVLHYDSPETNVVLKPGMTFTIEPMVNAGKKEIRSMKDGWTVKTKDRSLSAQYEHTIVVTD 242
Cdd:TIGR00500 159 SVVREYCGHGIGRKFHEEPQIPNYGKKFTNVRLKEGMVFTIEPMVNTGTEEITTAADGWTVKTKDGSLSAQFEHTIVITD 238

                  ....*....
gi 488978444  243 NGCEILTLR 251
Cdd:TIGR00500 239 NGPEILTER 247
MetAP1 cd01086
Methionine Aminopeptidase 1. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and ...
11-250 4.88e-140

Methionine Aminopeptidase 1. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and Peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.


Pssm-ID: 238519 [Multi-domain]  Cd Length: 238  Bit Score: 393.01  E-value: 4.88e-140
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488978444  11 IEKMRVAGRLAAEVLEMIEPYVKPGVSTGELDRICNDYIVnEQKAISACLGYHGYPKSVCISVNEVVCHGIPDDgKLLKD 90
Cdd:cd01086    1 IEGMREAGRIVAEVLDELAKAIKPGVTTKELDQIAHEFIE-EHGAYPAPLGYYGFPKSICTSVNEVVCHGIPDD-RVLKD 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488978444  91 GDIVNIDVTVIKDDFHGDTSKMFIVGKPTILGERLCRITQESLYLALRMVKPGINLRTIGAAIQKFVEAEGFSVVREYCG 170
Cdd:cd01086   79 GDIVNIDVGVELDGYHGDSARTFIVGEVSEEAKKLVEVTEEALYKGIEAVKPGNRIGDIGHAIEKYAEKNGYSVVREFGG 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488978444 171 HGIGRGFHEEPQVLHYDSPETNVVLKPGMTFTIEPMVNAGKKEIRSMKDGWTVKTKDRSLSAQYEHTIVVTDNGCEILTL 250
Cdd:cd01086  159 HGIGRKFHEEPQIPNYGRPGTGPKLKPGMVFTIEPMINLGTYEVVTLPDGWTVVTKDGSLSAQFEHTVLITEDGPEILTL 238
Peptidase_M24 pfam00557
Metallopeptidase family M24; This family contains metallopeptidases. It also contains ...
12-242 9.00e-59

Metallopeptidase family M24; This family contains metallopeptidases. It also contains non-peptidase homologs such as the N terminal domain of Spt16 which is a histone H3-H4 binding module.


Pssm-ID: 459852 [Multi-domain]  Cd Length: 208  Bit Score: 185.52  E-value: 9.00e-59
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488978444   12 EKMRVAGRLAAEVLEMIEPYVKPGVSTGELDRICNDYIVNEQKAisaclGYHGYPKSVCISVNEVVCHGIPDDGKLlKDG 91
Cdd:pfam00557   1 ELMRKAARIAAAALEAALAAIRPGVTERELAAELEAARLRRGGA-----RGPAFPPIVASGPNAAIPHYIPNDRVL-KPG 74
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488978444   92 DIVNIDVTVIKDD-FHGDTSKMFIVGKPTILGERLCRITQESLYLALRMVKPGINLRTIGAAIQKFVEAEGFS-VVREYC 169
Cdd:pfam00557  75 DLVLIDVGAEYDGgYCSDITRTFVVGKPSPEQRELYEAVLEAQEAAIAAVKPGVTGGDVDAAAREVLEEAGLGeYFPHGL 154
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 488978444  170 GHGIGRGFHEEPQVLHYDSpetNVVLKPGMTFTIEPMVNagkkeirsMKDGWTvktkdrslSAQYEHTIVVTD 242
Cdd:pfam00557 155 GHGIGLEVHEGPYISRGGD---DRVLEPGMVFTIEPGIY--------FIPGWG--------GVRIEDTVLVTE 208
 
Name Accession Description Interval E-value
PRK05716 PRK05716
methionine aminopeptidase; Validated
1-254 1.26e-170

methionine aminopeptidase; Validated


Pssm-ID: 235576 [Multi-domain]  Cd Length: 252  Bit Score: 470.77  E-value: 1.26e-170
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488978444   1 MAISIKTSEDIEKMRVAGRLAAEVLEMIEPYVKPGVSTGELDRICNDYIVNeQKAISACLGYHGYPKSVCISVNEVVCHG 80
Cdd:PRK05716   1 MAITIKTPEEIEKMRVAGRLAAEVLDEIEPHVKPGVTTKELDRIAEEYIRD-QGAIPAPLGYHGFPKSICTSVNEVVCHG 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488978444  81 IPDDgKLLKDGDIVNIDVTVIKDDFHGDTSKMFIVGKPTILGERLCRITQESLYLALRMVKPGINLRTIGAAIQKFVEAE 160
Cdd:PRK05716  80 IPSD-KVLKEGDIVNIDVTVIKDGYHGDTSRTFGVGEISPEDKRLCEVTKEALYLGIAAVKPGARLGDIGHAIQKYAEAE 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488978444 161 GFSVVREYCGHGIGRGFHEEPQVLHYDSPETNVVLKPGMTFTIEPMVNAGKKEIRSMKDGWTVKTKDRSLSAQYEHTIVV 240
Cdd:PRK05716 159 GFSVVREYCGHGIGRKFHEEPQIPHYGAPGDGPVLKEGMVFTIEPMINAGKREVKTLKDGWTVVTKDGSLSAQYEHTVAV 238
                        250
                 ....*....|....
gi 488978444 241 TDNGCEILTLRKDD 254
Cdd:PRK05716 239 TEDGPEILTLRPEE 252
Map COG0024
Methionine aminopeptidase [Translation, ribosomal structure and biogenesis];
3-254 1.34e-163

Methionine aminopeptidase [Translation, ribosomal structure and biogenesis];


Pssm-ID: 439795 [Multi-domain]  Cd Length: 250  Bit Score: 452.92  E-value: 1.34e-163
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488978444   3 ISIKTSEDIEKMRVAGRLAAEVLEMIEPYVKPGVSTGELDRICNDYIVnEQKAISACLGYHGYPKSVCISVNEVVCHGIP 82
Cdd:COG0024    1 IEIKTPEEIEKMREAGRIVAEVLDELAEAVKPGVTTLELDRIAEEFIR-DHGAIPAFLGYYGFPKSICTSVNEVVVHGIP 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488978444  83 DDgKLLKDGDIVNIDVTVIKDDFHGDTSKMFIVGKPTILGERLCRITQESLYLALRMVKPGINLRTIGAAIQKFVEAEGF 162
Cdd:COG0024   80 SD-RVLKDGDIVNIDVGAILDGYHGDSARTFVVGEVSPEARRLVEVTEEALYAGIAAAKPGNRLGDIGHAIQSYAESNGY 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488978444 163 SVVREYCGHGIGRGFHEEPQVLHYDSPETNVVLKPGMTFTIEPMVNAGKKEIRSMKDGWTVKTKDRSLSAQYEHTIVVTD 242
Cdd:COG0024  159 SVVREFVGHGIGREMHEEPQVPNYGRPGRGPRLKPGMVLAIEPMINAGTPEVKVLDDGWTVVTKDGSLSAQFEHTVAVTE 238
                        250
                 ....*....|..
gi 488978444 243 NGCEILTLRKDD 254
Cdd:COG0024  239 DGPEILTLPDGG 250
met_pdase_I TIGR00500
methionine aminopeptidase, type I; Methionine aminopeptidase is a cobalt-binding enzyme. ...
3-251 1.35e-143

methionine aminopeptidase, type I; Methionine aminopeptidase is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. This model describes type I. The role of this protein in general is to produce the mature form of cytosolic proteins by removing the N-terminal methionine. [Protein fate, Protein modification and repair]


Pssm-ID: 129591 [Multi-domain]  Cd Length: 247  Bit Score: 402.50  E-value: 1.35e-143
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488978444    3 ISIKTSEDIEKMRVAGRLAAEVLEMIEPYVKPGVSTGELDRICNDYIVNEQkAISACLGYHGYPKSVCISVNEVVCHGIP 82
Cdd:TIGR00500   1 ISLKSPDEIEKIRKAGRLAAEVLEELEREVKPGVSTKELDRIAKDFIEKHG-AKPAFLGYYGFPGSVCISVNEVVIHGIP 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488978444   83 DDgKLLKDGDIVNIDVTVIKDDFHGDTSKMFIVGKPTILGERLCRITQESLYLALRMVKPGINLRTIGAAIQKFVEAEGF 162
Cdd:TIGR00500  80 DK-KVLKDGDIVNIDVGVIYDGYHGDTAKTFLVGKISPEAEKLLECTEESLYKAIEEAKPGNRIGEIGAAIQKYAEAKGF 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488978444  163 SVVREYCGHGIGRGFHEEPQVLHYDSPETNVVLKPGMTFTIEPMVNAGKKEIRSMKDGWTVKTKDRSLSAQYEHTIVVTD 242
Cdd:TIGR00500 159 SVVREYCGHGIGRKFHEEPQIPNYGKKFTNVRLKEGMVFTIEPMVNTGTEEITTAADGWTVKTKDGSLSAQFEHTIVITD 238

                  ....*....
gi 488978444  243 NGCEILTLR 251
Cdd:TIGR00500 239 NGPEILTER 247
MetAP1 cd01086
Methionine Aminopeptidase 1. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and ...
11-250 4.88e-140

Methionine Aminopeptidase 1. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and Peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.


Pssm-ID: 238519 [Multi-domain]  Cd Length: 238  Bit Score: 393.01  E-value: 4.88e-140
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488978444  11 IEKMRVAGRLAAEVLEMIEPYVKPGVSTGELDRICNDYIVnEQKAISACLGYHGYPKSVCISVNEVVCHGIPDDgKLLKD 90
Cdd:cd01086    1 IEGMREAGRIVAEVLDELAKAIKPGVTTKELDQIAHEFIE-EHGAYPAPLGYYGFPKSICTSVNEVVCHGIPDD-RVLKD 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488978444  91 GDIVNIDVTVIKDDFHGDTSKMFIVGKPTILGERLCRITQESLYLALRMVKPGINLRTIGAAIQKFVEAEGFSVVREYCG 170
Cdd:cd01086   79 GDIVNIDVGVELDGYHGDSARTFIVGEVSEEAKKLVEVTEEALYKGIEAVKPGNRIGDIGHAIEKYAEKNGYSVVREFGG 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488978444 171 HGIGRGFHEEPQVLHYDSPETNVVLKPGMTFTIEPMVNAGKKEIRSMKDGWTVKTKDRSLSAQYEHTIVVTDNGCEILTL 250
Cdd:cd01086  159 HGIGRKFHEEPQIPNYGRPGTGPKLKPGMVFTIEPMINLGTYEVVTLPDGWTVVTKDGSLSAQFEHTVLITEDGPEILTL 238
PRK12896 PRK12896
methionine aminopeptidase; Reviewed
3-251 1.22e-126

methionine aminopeptidase; Reviewed


Pssm-ID: 237252 [Multi-domain]  Cd Length: 255  Bit Score: 359.92  E-value: 1.22e-126
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488978444   3 ISIKTSEDIEKMRVAGRLAAEVLEMIEPYVKPGVSTGELDRICNDYIVnEQKAISACLGYHGYPKSVCISVNEVVCHGIP 82
Cdd:PRK12896   8 MEIKSPRELEKMRKIGRIVATALKEMGKAVEPGMTTKELDRIAEKRLE-EHGAIPSPEGYYGFPGSTCISVNEEVAHGIP 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488978444  83 DDgKLLKDGDIVNIDVTVIKDDFHGDTSKMFIVGKPTILGERLCRITQESLYLALRMVKPGINLRTIGAAIQKFVEAEGF 162
Cdd:PRK12896  87 GP-RVIKDGDLVNIDVSAYLDGYHGDTGITFAVGPVSEEAEKLCRVAEEALWAGIKQVKAGRPLNDIGRAIEDFAKKNGY 165
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488978444 163 SVVREYCGHGIGRGFHEEPQV-LHYDSPETNVVLKPGMTFTIEPMVNAGKKEIRSMKDGWTVKTKDRSLSAQYEHTIVVT 241
Cdd:PRK12896 166 SVVRDLTGHGVGRSLHEEPSViLTYTDPLPNRLLRPGMTLAVEPFLNLGAKDAETLDDGWTVVTPDKSLSAQFEHTVVVT 245
                        250
                 ....*....|
gi 488978444 242 DNGCEILTLR 251
Cdd:PRK12896 246 RDGPEILTDR 255
PLN03158 PLN03158
methionine aminopeptidase; Provisional
3-251 2.52e-89

methionine aminopeptidase; Provisional


Pssm-ID: 215607 [Multi-domain]  Cd Length: 396  Bit Score: 270.17  E-value: 2.52e-89
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488978444   3 ISIKTSEDIEKMRVAGRLAAEVLEMIEPYVKPGVSTGELDRICNDYIVnEQKAISACLGYHGYPKSVCISVNEVVCHGIP 82
Cdd:PLN03158 135 VEIKTPEQIQRMRETCRIAREVLDAAARAIKPGVTTDEIDRVVHEATI-AAGGYPSPLNYHFFPKSCCTSVNEVICHGIP 213
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488978444  83 DDGKLlKDGDIVNIDVTVIKDDFHGDTSKMFIVGKPTILGERLCRITQESLYLALRMVKPGINLRTIGAAIQKFVEAEGF 162
Cdd:PLN03158 214 DARKL-EDGDIVNVDVTVYYKGCHGDLNETFFVGNVDEASRQLVKCTYECLEKAIAIVKPGVRYREVGEVINRHATMSGL 292
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488978444 163 SVVREYCGHGIGRGFHEEPQVLHYDSPETNVVLKPGMTFTIEPMVNAGKKEIRSMKDGWTVKTKDRSLSAQYEHTIVVTD 242
Cdd:PLN03158 293 SVVKSYCGHGIGELFHCAPNIPHYARNKAVGVMKAGQVFTIEPMINAGVWRDRMWPDGWTAVTADGKRSAQFEHTLLVTE 372

                 ....*....
gi 488978444 243 NGCEILTLR 251
Cdd:PLN03158 373 TGVEVLTAR 381
PRK12318 PRK12318
methionyl aminopeptidase;
3-253 4.57e-81

methionyl aminopeptidase;


Pssm-ID: 183434 [Multi-domain]  Cd Length: 291  Bit Score: 245.50  E-value: 4.57e-81
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488978444   3 ISIKTSEDIEKMRVAGRLAAEVLEMIEPYVKPGVSTGELDRICNDyIVNEQKAISACLGYHG--YPKSVCISVNEVVCHG 80
Cdd:PRK12318  41 IIIKTPEQIEKIRKACQVTARILDALCEAAKEGVTTNELDELSRE-LHKEYNAIPAPLNYGSppFPKTICTSLNEVICHG 119
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488978444  81 IPDDGKLlKDGDIVNIDVTVIKDDFHGDTSKMFIVGKPTILGERLCRITQESLYLALRMVKPGINLRTIGAAIQKFVEAE 160
Cdd:PRK12318 120 IPNDIPL-KNGDIMNIDVSCIVDGYYGDCSRMVMIGEVSEIKKKVCQASLECLNAAIAILKPGIPLYEIGEVIENCADKY 198
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488978444 161 GFSVVREYCGHGIGRGFHEEPQVLHYDSpETNVVLKPGMTFTIEPMVNAGKKE-IRSMKDGWTVKTKDRSLSAQYEHTIV 239
Cdd:PRK12318 199 GFSVVDQFVGHGVGIKFHENPYVPHHRN-SSKIPLAPGMIFTIEPMINVGKKEgVIDPINHWEARTCDNQPSAQWEHTIL 277
                        250
                 ....*....|....
gi 488978444 240 VTDNGCEILTLRKD 253
Cdd:PRK12318 278 ITETGYEILTLLDK 291
PRK12897 PRK12897
type I methionyl aminopeptidase;
3-249 4.34e-61

type I methionyl aminopeptidase;


Pssm-ID: 171806  Cd Length: 248  Bit Score: 192.94  E-value: 4.34e-61
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488978444   3 ISIKTSEDIEKMRVAGRLAAEVLEMIEPYVKPGVSTGELDRICNDYIvNEQKAISACLGYHGYPKSVCISVNEVVCHGIP 82
Cdd:PRK12897   2 ITIKTKNEIDLMHESGKLLASCHREIAKIMKPGITTKEINTFVEAYL-EKHGATSEQKGYNGYPYAICASVNDEMCHAFP 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488978444  83 DDGKLlKDGDIVNIDVTVIKDDFHGDTSKMFIVGKPTILGERLCRITQESLYLALRMVKPGINLRTIGAAIQKFVEAEGF 162
Cdd:PRK12897  81 ADVPL-TEGDIVTIDMVVNLNGGLSDSAWTYRVGKVSDEAEKLLLVAENALYKGIDQAVIGNRVGDIGYAIESYVANEGF 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488978444 163 SVVREYCGHGIGRGFHEEPQVLHYDSPETNVVLKPGMTFTIEPMVNAGKKEIRSMKDGWTVKTKDRSLSAQYEHTIVVTD 242
Cdd:PRK12897 160 SVARDFTGHGIGKEIHEEPAIFHFGKQGQGPELQEGMVITIEPIVNVGMRYSKVDLNGWTARTMDGKLSAQYEHTIAITK 239

                 ....*..
gi 488978444 243 NGCEILT 249
Cdd:PRK12897 240 DGPIILT 246
Peptidase_M24 pfam00557
Metallopeptidase family M24; This family contains metallopeptidases. It also contains ...
12-242 9.00e-59

Metallopeptidase family M24; This family contains metallopeptidases. It also contains non-peptidase homologs such as the N terminal domain of Spt16 which is a histone H3-H4 binding module.


Pssm-ID: 459852 [Multi-domain]  Cd Length: 208  Bit Score: 185.52  E-value: 9.00e-59
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488978444   12 EKMRVAGRLAAEVLEMIEPYVKPGVSTGELDRICNDYIVNEQKAisaclGYHGYPKSVCISVNEVVCHGIPDDGKLlKDG 91
Cdd:pfam00557   1 ELMRKAARIAAAALEAALAAIRPGVTERELAAELEAARLRRGGA-----RGPAFPPIVASGPNAAIPHYIPNDRVL-KPG 74
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488978444   92 DIVNIDVTVIKDD-FHGDTSKMFIVGKPTILGERLCRITQESLYLALRMVKPGINLRTIGAAIQKFVEAEGFS-VVREYC 169
Cdd:pfam00557  75 DLVLIDVGAEYDGgYCSDITRTFVVGKPSPEQRELYEAVLEAQEAAIAAVKPGVTGGDVDAAAREVLEEAGLGeYFPHGL 154
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 488978444  170 GHGIGRGFHEEPQVLHYDSpetNVVLKPGMTFTIEPMVNagkkeirsMKDGWTvktkdrslSAQYEHTIVVTD 242
Cdd:pfam00557 155 GHGIGLEVHEGPYISRGGD---DRVLEPGMVFTIEPGIY--------FIPGWG--------GVRIEDTVLVTE 208
PRK07281 PRK07281
methionyl aminopeptidase;
3-249 2.25e-45

methionyl aminopeptidase;


Pssm-ID: 180918  Cd Length: 286  Bit Score: 153.85  E-value: 2.25e-45
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488978444   3 ISIKTSEDIEKMRVAGRLAAEVLEMIEPYVKPGVSTGELD----RICNdyivnEQKAISACLGYHG----YPKSVCISVN 74
Cdd:PRK07281   2 ITLKSAREIEAMDRAGDFLASIHIGLRDLIKPGVDMWEVEeyvrRRCK-----EENVLPLQIGVDGammdYPYATCCGLN 76
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488978444  75 EVVCHGIPDDgKLLKDGDIVNID-----------VTVIKDDFH----------------GDTSKMFIVGKPTILGERLCR 127
Cdd:PRK07281  77 DEVAHAFPRH-YILKEGDLLKVDmvlsepldksiVDVSKLNFDnveqmkkytesyrgglADSCWAYAVGTPSDEVKNLMD 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488978444 128 ITQESLYLALRMVKPGINLRTIGAAIQKFVEAEGFSVVREYCGHGIGRGFHEEPQVLHYDSPETNVVLKPGMTFTIEPMV 207
Cdd:PRK07281 156 VTKEAMYRGIEQAVVGNRIGDIGAAIQEYAESRGYGVVRDLVGHGVGPTMHEEPMVPNYGTAGRGLRLREGMVLTIEPMI 235
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|...
gi 488978444 208 NAGKKEIRS-MKDGWTVKTKDRSLSAQYEHTIVVTDNGCEILT 249
Cdd:PRK07281 236 NTGTWEIDTdMKTGWAHKTLDGGLSCQYEHQFVITKDGPVILT 278
APP_MetAP cd01066
A family including aminopeptidase P, aminopeptidase M, and prolidase. Also known as ...
11-245 4.05e-44

A family including aminopeptidase P, aminopeptidase M, and prolidase. Also known as metallopeptidase family M24. This family of enzymes is able to cleave amido-, imido- and amidino-containing bonds. Members exibit relatively narrow substrate specificity compared to other metallo-aminopeptidases, suggesting they play roles in regulation of biological processes rather than general protein degradation.


Pssm-ID: 238514 [Multi-domain]  Cd Length: 207  Bit Score: 148.37  E-value: 4.05e-44
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488978444  11 IEKMRVAGRLAAEVLEMIEPYVKPGVSTGELDRICNDYIVNeqkaisaclGYHGYPKSVCISVNEV--VCHGIPDDGKLl 88
Cdd:cd01066    1 IARLRKAAEIAEAAMAAAAEAIRPGVTEAEVAAAIEQALRA---------AGGYPAGPTIVGSGARtaLPHYRPDDRRL- 70
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488978444  89 KDGDIVNIDVTVIKDDFHGDTSKMFIVGKPTILGERLCRITQESLYLALRMVKPGINLRTIGAAIQKFVEAEGFSVVR-E 167
Cdd:cd01066   71 QEGDLVLVDLGGVYDGYHADLTRTFVIGEPSDEQRELYEAVREAQEAALAALRPGVTAEEVDAAAREVLEEHGLGPNFgH 150
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 488978444 168 YCGHGIGRGFHEEPqvlhYDSPETNVVLKPGMTFTIEPMVnagkkeirSMKDGWTVKtkdrslsaqYEHTIVVTDNGC 245
Cdd:cd01066  151 RTGHGIGLEIHEPP----VLKAGDDTVLEPGMVFAVEPGL--------YLPGGGGVR---------IEDTVLVTEDGP 207
PepP COG0006
Xaa-Pro aminopeptidase [Amino acid transport and metabolism];
4-249 6.94e-36

Xaa-Pro aminopeptidase [Amino acid transport and metabolism];


Pssm-ID: 439777 [Multi-domain]  Cd Length: 299  Bit Score: 129.55  E-value: 6.94e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488978444   4 SIKTSEDIEKMRVAGRLAAEVLEMIEPYVKPGVStgELDricndyIVNEQKAISACLGYHGYPKSVCISVNE--VVCHGI 81
Cdd:COG0006   72 AIKSPEEIELMRKAARIADAAHEAALAALRPGVT--ERE------VAAELEAAMRRRGAEGPSFDTIVASGEnaAIPHYT 143
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488978444  82 PDDGKLlKDGDIVNIDVTVIKDDFHGDTSKMFIVGKPTILGERLCRITQESLYLALRMVKPGINLRTIGAAIQKFVEAEG 161
Cdd:COG0006  144 PTDRPL-KPGDLVLIDAGAEYDGYTSDITRTVAVGEPSDEQREIYEAVLEAQEAAIAALKPGVTGGEVDAAARDVLAEAG 222
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488978444 162 FsvvREY----CGHGIGRGFHEEPQVlhydSPETNVVLKPGMTFTIEPMVnagkkeirSMKDGWTVKTkdrslsaqyEHT 237
Cdd:COG0006  223 Y---GEYfphgTGHGVGLDVHEGPQI----SPGNDRPLEPGMVFTIEPGI--------YIPGIGGVRI---------EDT 278
                        250
                 ....*....|..
gi 488978444 238 IVVTDNGCEILT 249
Cdd:COG0006  279 VLVTEDGAEVLT 290
APP-like cd01092
Similar to Prolidase and Aminopeptidase P. The members of this subfamily presumably catalyse ...
11-205 3.74e-27

Similar to Prolidase and Aminopeptidase P. The members of this subfamily presumably catalyse hydrolysis of Xaa-Pro dipeptides and/or release of any N-terminal amino acid, including proline, that is linked with proline.


Pssm-ID: 238525 [Multi-domain]  Cd Length: 208  Bit Score: 104.13  E-value: 3.74e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488978444  11 IEKMRVAGRLAAEVLEMIEPYVKPGVStgELDricndyIVNEQKAISACLGYHGY--PKSVCISVNEVVCHGIPDDgKLL 88
Cdd:cd01092    1 IELLRKAARIADKAFEELLEFIKPGMT--ERE------VAAELEYFMRKLGAEGPsfDTIVASGPNSALPHGVPSD-RKI 71
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488978444  89 KDGDIVNIDVTVIKDDFHGDTSKMFIVGKPTILGERLCRITQESLYLALRMVKPGINLRTIGAAIQKFVEAEGFSvvrEY 168
Cdd:cd01092   72 EEGDLVLIDFGAIYDGYCSDITRTVAVGEPSDELKEIYEIVLEAQQAAIKAVKPGVTAKEVDKAARDVIEEAGYG---EY 148
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|.
gi 488978444 169 ----CGHGIGRGFHEEPQVlhydSPETNVVLKPGMTFTIEP 205
Cdd:cd01092  149 fihrTGHGVGLEVHEAPYI----SPGSDDVLEEGMVFTIEP 185
MetAP2 cd01088
Methionine Aminopeptidase 2. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and ...
11-249 7.53e-24

Methionine Aminopeptidase 2. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.


Pssm-ID: 238521 [Multi-domain]  Cd Length: 291  Bit Score: 97.32  E-value: 7.53e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488978444  11 IEKMRVAGRLAAEVLEMIEPYVKPGVSTGEldrICNdYIVNEQKAISACLGYhgyPksVCISVNEVVCH--GIPDDGKLL 88
Cdd:cd01088    1 LEKYREAGEIHRQVRKYAQSLIKPGMTLLE---IAE-FVENRIRELGAGPAF---P--VNLSINECAAHytPNAGDDTVL 71
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488978444  89 KDGDIVNIDVTVIKDDFHGDTSKMFIVGKptiLGERLCRITQESLYLALRMVKPGINLRTIGAAIQKFVEAEGFSVVREY 168
Cdd:cd01088   72 KEGDVVKLDFGAHVDGYIADSAFTVDFDP---KYDDLLEAAKEALNAAIKEAGPDVRLGEIGEAIEEVIESYGFKPIRNL 148
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488978444 169 CGHGIGR-GFHEEPQVLHYDSPEtNVVLKPGMTFTIEPMVNAGKKEIRSMKDG--------------------------- 220
Cdd:cd01088  149 TGHSIERyRLHAGKSIPNVKGGE-GTRLEEGDVYAIEPFATTGKGYVHDGPECsiymlnrdkplrlprarklldviyenf 227
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 488978444 221 --------W--------------------------TVKTKDRSLSAQYEHTIVVTDNGCEILT 249
Cdd:cd01088  228 gtlpfarrWldrlgetkllmalknlckagivypypVLKEISGGYVAQFEHTIIVREDGKEVTT 290
met_pdase_II TIGR00501
methionine aminopeptidase, type II; Methionine aminopeptidase (map) is a cobalt-binding enzyme. ...
9-249 2.36e-18

methionine aminopeptidase, type II; Methionine aminopeptidase (map) is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. The role of this protein in general is to produce the mature amino end of cytosolic proteins by removing the N-terminal methionine. This model describes type II, among which the eukaryotic members typically have an N-terminal extension not present in archaeal members. It can act cotranslationally. The enzyme from rat has been shown to associate with translation initiation factor 2 (IF-2) and may have a role in translational regulation. [Protein fate, Protein modification and repair]


Pssm-ID: 129592  Cd Length: 295  Bit Score: 82.53  E-value: 2.36e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488978444    9 EDIEKMRVAGRLAAEVLEMIEPYVKPGVSTGELDRICNDYIVNEQkaisaclGYHGYPKSvcISVNEVVCHGIP--DDGK 86
Cdd:TIGR00501   3 ERAEKWIEAGKIHSKVRREAADRIVPGVKLLEVAEFVENRIRELG-------AEPAFPCN--ISINECAAHFTPkaGDKT 73
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488978444   87 LLKDGDIVNIDVTVIKDDFHGDTSKMFIVGKPTilgERLCRITQESLYLALRMVKPGINLRTIGAAIQKFVEAEGFSVVR 166
Cdd:TIGR00501  74 VFKDGDVVKLDLGAHVDGYIADTAITVDLGDQY---DNLVKAAKDALYTAIKEIRAGVRVGEIGKAIQEVIESYGVKPIS 150
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488978444  167 EYCGHGIGR-GFHEEPQVLHYDSpETNVVLKPGMTFTIEPMVNAGKKEIRSMKDG------------------------- 220
Cdd:TIGR00501 151 NLTGHSMAPyRLHGGKSIPNVKE-RDTTKLEEGDVVAIEPFATDGVGYVTDGGEVsiyaflaerpvrldsarnllktide 229
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 488978444  221 ----------WTVKTKDR--------------------------SLSAQYEHTIVVTDNGCEILT 249
Cdd:TIGR00501 230 nygtlpfarrWLDKLGDEkylfalnnlirhgliydypvlneisgGYVAQWEHTILVEEHGKEVTT 294
PRK09795 PRK09795
aminopeptidase; Provisional
5-205 5.45e-14

aminopeptidase; Provisional


Pssm-ID: 182080 [Multi-domain]  Cd Length: 361  Bit Score: 70.74  E-value: 5.45e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488978444   5 IKTSEDIEKMRVAGRLAAEVLEMIEPYVKPGVSTGELDRICnDYIVNEQKAISACL------GYHGypksvcisvneVVC 78
Cdd:PRK09795 127 IKTPEEVEKIRLACGIADRGAEHIRRFIQAGMSEREIAAEL-EWFMRQQGAEKASFdtivasGWRG-----------ALP 194
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488978444  79 HGIPDDgKLLKDGDIVNIDVTVIKDDFHGDTSKMFIVGKPTILGER-----LCRITQESLYLALRMVKPGINLRTIGAAI 153
Cdd:PRK09795 195 HGKASD-KIVAAGEFVTLDFGALYQGYCSDMTRTLLVNGEGVSAEShplfnVYQIVLQAQLAAISAIRPGVRCQQVDDAA 273
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 488978444 154 QKFVEAEGFSvvrEY----CGHGIGRGFHEEPQVlhydSPETNVVLKPGMTFTIEP 205
Cdd:PRK09795 274 RRVITEAGYG---DYfghnTGHAIGIEVHEDPRF----SPRDTTTLQPGMLLTVEP 322
PA2G4-like cd01089
Related to aminopepdidase M, this family contains proliferation-associated protein 2G4. Family ...
11-249 8.50e-12

Related to aminopepdidase M, this family contains proliferation-associated protein 2G4. Family members have been implicated in cell cycle control.


Pssm-ID: 238522  Cd Length: 228  Bit Score: 63.12  E-value: 8.50e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488978444  11 IEKMRVAGRLAAEVLEMIEPYVKPGVSTGELDRICNDYIVNE-----------QKAISaclgyhgYPksVCISVNEVVCH 79
Cdd:cd01089    1 VTKYKTAGQIANKVLKQVISLCVPGAKVVDLCEKGDKLILEElgkvykkekklEKGIA-------FP--TCISVNNCVCH 71
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488978444  80 GIP---DDGKLLKDGDIVNIDVTVIKDDFHGDTSKMFIVG---KPTILGE--RLCRITQESLYLALRMVKPGINLRTIGA 151
Cdd:cd01089   72 FSPlksDATYTLKDGDVVKIDLGCHIDGYIAVVAHTIVVGaeaETPVTGKkaDVIAAAHYALEAALRLLRPGNQNSDITE 151
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488978444 152 AIQKFVEAEGFSVVREYCGHgigrgfheepqvlhydspetnvVLKPGMTFTiepmvnAGKKEIRSMKDGWTVK------T 225
Cdd:cd01089  152 AIQKVIVDYGCTPVEGVLSH----------------------QLKRVVSSG------EGKAKLVECVKHGLLFpypvlyE 203
                        250       260
                 ....*....|....*....|....
gi 488978444 226 KDRSLSAQYEHTIVVTDNGCEILT 249
Cdd:cd01089  204 KEGEVVAQFKLTVLLTPNGVTVLT 227
crvDNA_42K TIGR00495
42K curved DNA binding protein; Proteins identified by this model have been identified in a ...
2-234 1.35e-09

42K curved DNA binding protein; Proteins identified by this model have been identified in a number of species as a nuclear (but not nucleolar) protein with a cell cycle dependence. Various names given to members of this family have included cell cycle protein p38-2G4, DNA-binding protein GBP16, and proliferation-associated protein 1. This protein is closely related to methionine aminopeptidase, a cobolt-binding protein. [Unknown function, General]


Pssm-ID: 273105  Cd Length: 390  Bit Score: 57.98  E-value: 1.35e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488978444    2 AISIKTSEDIEKMRVAGRLAAEVLEMIEPYVKPGVSTGELDRICNDYIVNEQKAISACLG--YHGYPKSVCISVNEVVCH 79
Cdd:TIGR00495  11 AYSLSNPEVVTKYKMAGEIANNVLKSVVEACSPGAKVVDICEKGDAFIMEETAKIFKKEKemEKGIAFPTCISVNNCVGH 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488978444   80 GIP---DDGKLLKDGDIVNIDVTVIKDDFHGDTSKMFIVGKPT---ILGERLCRITQESLYL--ALRMVKPGINLRTIGA 151
Cdd:TIGR00495  91 FSPlksDQDYILKEGDVVKIDLGCHIDGFIALVAHTFVVGVAQeepVTGRKADVIAAAHLAAeaALRLVKPGNTNTQVTE 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488978444  152 AIQKFVEAEGFSVVREYCGHGIGRGFHE-EPQVLHYDSPETN-----VVLKPGMTFTIEPMVNAGKKEIRSMKDGWTVKT 225
Cdd:TIGR00495 171 AINKVAHSYGCTPVEGMLSHQLKQHVIDgEKVIISNPSDSQKkdhdtAEFEENEVYAVDILVSTGEGKAKDADQRTTIYK 250

                  ....*....
gi 488978444  226 KDrsLSAQY 234
Cdd:TIGR00495 251 RD--PSKTY 257
PRK10879 PRK10879
proline aminopeptidase P II; Provisional
5-261 2.08e-08

proline aminopeptidase P II; Provisional


Pssm-ID: 182804 [Multi-domain]  Cd Length: 438  Bit Score: 54.35  E-value: 2.08e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488978444   5 IKTSEDIEKMRVAGRLAAEVLEMIEPYVKPGVSTGELD-RICNDYivNEQKAisaclGYHGYPKSVCISVNEVVCHGIPD 83
Cdd:PRK10879 173 FKSPEEIAVLRRAGEISALAHTRAMEKCRPGMFEYQLEgEIHHEF--NRHGA-----RYPSYNTIVGSGENGCILHYTEN 245
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488978444  84 DGKLlKDGDIVNIDVTVIKDDFHGDTSKMFIV-GKPTILGERLCRITQESLYLALRMVKPGINLRTI-GAAIQKFVE--- 158
Cdd:PRK10879 246 ESEM-RDGDLVLIDAGCEYKGYAGDITRTFPVnGKFTPAQREIYDIVLESLETSLRLYRPGTSIREVtGEVVRIMVSglv 324
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488978444 159 -------------AEgfSVVREYCGHGI----GRGFHEepqVLHYDsPETNVVLKPGMTFTIEPMVnagkkEIRSMKDgw 221
Cdd:PRK10879 325 klgilkgdvdqliAE--NAHRPFFMHGLshwlGLDVHD---VGVYG-QDRSRILEPGMVLTVEPGL-----YIAPDAD-- 391
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|...
gi 488978444 222 tVKTKDRSLSAQYEHTIVVTDNGCEILT---LRKDDTIPAIIS 261
Cdd:PRK10879 392 -VPEQYRGIGIRIEDDIVITETGNENLTasvVKKPDEIEALMA 433
Prolidase cd01087
Prolidase. E.C. 3.4.13.9. Also known as Xaa-Pro dipeptidase, X-Pro dipeptidase, proline ...
11-249 1.17e-07

Prolidase. E.C. 3.4.13.9. Also known as Xaa-Pro dipeptidase, X-Pro dipeptidase, proline dipeptidase., imidodipeptidase, peptidase D, gamma-peptidase. Catalyses hydrolysis of Xaa-Pro dipeptides; also acts on aminoacyl-hydroxyproline analogs. No action on Pro-Pro.


Pssm-ID: 238520 [Multi-domain]  Cd Length: 243  Bit Score: 51.42  E-value: 1.17e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488978444  11 IEKMRVAGRLAAEVLEMIEPYVKPGVSTGELDRicndYIVNEQKAISACLGYHgypkSVCIS-VNEVVCHGIPDDgKLLK 89
Cdd:cd01087    1 IELMRKACDISAEAHRAAMKASRPGMSEYELEA----EFEYEFRSRGARLAYS----YIVAAgSNAAILHYVHND-QPLK 71
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488978444  90 DGDIVNIDVTVIKDDFHGDTSKMFIV-GKPTILGERLCRITQESLYLALRMVKPGINLRTIGAAIQK------------- 155
Cdd:cd01087   72 DGDLVLIDAGAEYGGYASDITRTFPVnGKFTDEQRELYEAVLAAQKAAIAACKPGVSYEDIHLLAHRvlaeglkelgilk 151
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488978444 156 --FVEAEGFSVVREYCGHGIGRGF----HEEPQVLHYDSpeTNVVLKPGMTFTIEP--MVNAGKKEIRSMKDGWTVKTKD 227
Cdd:cd01087  152 gdVDEIVESGAYAKFFPHGLGHYLgldvHDVGGYLRYLR--RARPLEPGMVITIEPgiYFIPDLLDVPEYFRGGGIRIED 229
                        250       260
                 ....*....|....*....|..
gi 488978444 228 rslsaqyehTIVVTDNGCEILT 249
Cdd:cd01087  230 ---------DVLVTEDGPENLT 242
PRK15173 PRK15173
peptidase; Provisional
81-204 1.34e-05

peptidase; Provisional


Pssm-ID: 185095 [Multi-domain]  Cd Length: 323  Bit Score: 45.48  E-value: 1.34e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488978444  81 IPDDGKLLKdGDIVNIDVTVIKDDFHGDTSKMFIVGKPTILGERLCRITQESLYLALRMVKPGINLRTIGAAIQKFVEAE 160
Cdd:PRK15173 164 IPSNTKACS-GDLIKFDCGVDVDGYGADIARTFVVGEPPEITRKIYQTIRTGHEHMLSMVAPGVKMKDVFDSTMEVIKKS 242
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*..
gi 488978444 161 GF-SVVREYCGHGIG--RGFHEEPQVlhydSPETNVVLKPGMTFTIE 204
Cdd:PRK15173 243 GLpNYNRGHLGHGNGvfLGLEESPFV----STHATESFTSGMVLSLE 285
PRK14575 PRK14575
putative peptidase; Provisional
81-204 1.99e-05

putative peptidase; Provisional


Pssm-ID: 173039 [Multi-domain]  Cd Length: 406  Bit Score: 45.08  E-value: 1.99e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488978444  81 IPDDGKLLKdGDIVNIDVTVIKDDFHGDTSKMFIVGKPTILGERLCRITQESLYLALRMVKPGINLRTIGAAIQKFVEAE 160
Cdd:PRK14575 247 IPSNTKACS-GDLIKFDCGVDVDGYGADIARTFVVGEPPEITRKIYQTIRTGHEHMLSMVAPGVKMKDVFDSTMEVIKKS 325
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*..
gi 488978444 161 GF-SVVREYCGHGIG--RGFHEEPQVlhydSPETNVVLKPGMTFTIE 204
Cdd:PRK14575 326 GLpNYNRGHLGHGNGvfLGLEESPFV----STHATESFTSGMVLSLE 368
PRK14576 PRK14576
putative endopeptidase; Provisional
71-249 8.99e-05

putative endopeptidase; Provisional


Pssm-ID: 173040 [Multi-domain]  Cd Length: 405  Bit Score: 43.08  E-value: 8.99e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488978444  71 ISVNEVVCHGIPDDGKLLKDGDIVNIDVTVIKDDFHGDTSKMFIVGKPTILGERLCRITQESLYLALRMVKPGINLRTIG 150
Cdd:PRK14576 235 ISVGDNFSPKIIADTTPAKVGDLIKFDCGIDVAGYGADLARTFVLGEPDKLTQQIYDTIRTGHEHMLSMVAPGVKLKAVF 314
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488978444 151 AAIQKFVEAEGFS-VVREYCGHGIG--RGFHEEPQVlhydSPETNVVLKPGMTFTIE-PMVNAGKKEIrsmkdgwtvktk 226
Cdd:PRK14576 315 DSTMAVIKTSGLPhYNRGHLGHGDGvfLGLEEVPFV----STQATETFCPGMVLSLEtPYYGIGVGSI------------ 378
                        170       180
                 ....*....|....*....|...
gi 488978444 227 drslsaQYEHTIVVTDNGCEILT 249
Cdd:PRK14576 379 ------MLEDMILITDSGFEFLS 395
APP cd01085
X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also known as X-Pro aminopeptidase, proline ...
170-205 3.97e-04

X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also known as X-Pro aminopeptidase, proline aminopeptidase, aminopeptidase P, and aminoacylproline aminopeptidase. Catalyses release of any N-terminal amino acid, including proline, that is linked with proline, even from a dipeptide or tripeptide.


Pssm-ID: 238518 [Multi-domain]  Cd Length: 224  Bit Score: 40.62  E-value: 3.97e-04
                         10        20        30
                 ....*....|....*....|....*....|....*...
gi 488978444 170 GHGIGR--GFHEEPQVLHydSPETNVVLKPGMTFTIEP 205
Cdd:cd01085  161 GHGVGSflNVHEGPQSIS--PAPNNVPLKAGMILSNEP 196
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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