NADH:ubiquinone reductase (Na(+)-transporting) subunit A is a component of the NQR complex that catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm
Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrA [Energy production and ...
2-446
0e+00
Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrA [Energy production and conversion]; Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrA is part of the Pathway/BioSystem: Na+-translocating NADH dehydrogenase
Pssm-ID: 441332 [Multi-domain] Cd Length: 445 Bit Score: 832.47 E-value: 0e+00
NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit; This model represents the NqrA ...
2-447
0e+00
NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit; This model represents the NqrA subunit of the six-protein, Na(+)-pumping NADH-quinone reductase of a number of marine and pathogenic Gram-negative bacteria. This oxidoreductase complex functions primarily as a sodium ion pump. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273885 [Multi-domain] Cd Length: 447 Bit Score: 631.02 E-value: 0e+00
Na(+)-translocating NADH-quinone reductase subunit A (NQRA); This family consists of several ...
1-257
8.59e-161
Na(+)-translocating NADH-quinone reductase subunit A (NQRA); This family consists of several bacterial Na(+)-translocating NADH-quinone reductase subunit A (NQRA) proteins. The Na(+)-translocating NADH: ubiquinone oxidoreductase (Na(+)-NQR) generates an electrochemical Na(+) potential driven by aerobic respiration.
Pssm-ID: 461773 Cd Length: 257 Bit Score: 453.97 E-value: 8.59e-161
Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrA [Energy production and ...
2-446
0e+00
Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrA [Energy production and conversion]; Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrA is part of the Pathway/BioSystem: Na+-translocating NADH dehydrogenase
Pssm-ID: 441332 [Multi-domain] Cd Length: 445 Bit Score: 832.47 E-value: 0e+00
NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit; This model represents the NqrA ...
2-447
0e+00
NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit; This model represents the NqrA subunit of the six-protein, Na(+)-pumping NADH-quinone reductase of a number of marine and pathogenic Gram-negative bacteria. This oxidoreductase complex functions primarily as a sodium ion pump. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273885 [Multi-domain] Cd Length: 447 Bit Score: 631.02 E-value: 0e+00
Na(+)-translocating NADH-quinone reductase subunit A (NQRA); This family consists of several ...
1-257
8.59e-161
Na(+)-translocating NADH-quinone reductase subunit A (NQRA); This family consists of several bacterial Na(+)-translocating NADH-quinone reductase subunit A (NQRA) proteins. The Na(+)-translocating NADH: ubiquinone oxidoreductase (Na(+)-NQR) generates an electrochemical Na(+) potential driven by aerobic respiration.
Pssm-ID: 461773 Cd Length: 257 Bit Score: 453.97 E-value: 8.59e-161
NQRA C-terminal domain; This family consists of the C-terminal domain of several bacterial Na( ...
262-312
5.56e-21
NQRA C-terminal domain; This family consists of the C-terminal domain of several bacterial Na(+)-translocating NADH-quinone reductase subunit A (NQRA) proteins. The Na(+)-translocating NADH: ubiquinone oxidoreductase (Na(+)-NQR) generates an electrochemical Na(+) potential driven by aerobic respiration.
Pssm-ID: 463416 [Multi-domain] Cd Length: 51 Bit Score: 85.69 E-value: 5.56e-21
Na+-translocating ferredoxin:NAD+ oxidoreductase RNF, RnfC subunit [Energy production and ...
45-427
8.10e-08
Na+-translocating ferredoxin:NAD+ oxidoreductase RNF, RnfC subunit [Energy production and conversion]; Na+-translocating ferredoxin:NAD+ oxidoreductase RNF, RnfC subunit is part of the Pathway/BioSystem: Na+-translocating Fd:NADH oxidoreductase
Pssm-ID: 443694 [Multi-domain] Cd Length: 451 Bit Score: 54.37 E-value: 8.10e-08
RnfC Barrel sandwich hybrid domain; This domain is part of the barrel sandwich hybrid ...
18-96
1.27e-05
RnfC Barrel sandwich hybrid domain; This domain is part of the barrel sandwich hybrid superfamily. It is found at the N-terminus of the RnfC Electron transport complex protein. It appears to be most related to the N-terminal NQRA domain (pfam05896).
Pssm-ID: 433157 [Multi-domain] Cd Length: 101 Bit Score: 43.70 E-value: 1.27e-05
Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component [Energy production and conversion]; Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component is part of the Pathway/BioSystem: Pyruvate oxidation
Pssm-ID: 440274 [Multi-domain] Cd Length: 77 Bit Score: 40.44 E-value: 9.29e-05
Biotin-requiring enzyme; This family covers two Prosite entries, the conserved lysine residue ...
28-83
7.51e-03
Biotin-requiring enzyme; This family covers two Prosite entries, the conserved lysine residue binds biotin in one group and lipoic acid in the other. Note that the HMM does not currently recognize the Glycine cleavage system H proteins.
Pssm-ID: 395290 [Multi-domain] Cd Length: 73 Bit Score: 35.27 E-value: 7.51e-03
Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
References:
Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
of the residues that compose this conserved feature have been mapped to the query sequence.
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