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Conserved domains on  [gi|488981554|ref|WP_002892383|]
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MULTISPECIES: molecular chaperone [Klebsiella]

Protein Classification

molecular chaperone( domain architecture ID 11459711)

molecular chaperone belonging to the periplasmic pilus chaperone family may be involved in fimbrial biogenesis; similar to Escherichia coli fimbrial chaperones, YraI, YqiH, YbgP and ElfD

CATH:  2.60.40.10
Gene Ontology:  GO:0061077|GO:0030288|GO:0043711
PubMed:  1683764|8670884
SCOP:  4002248|4007561

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
FimC COG3121
P pilus assembly protein, chaperone PapD [Extracellular structures];
1-230 1.25e-84

P pilus assembly protein, chaperone PapD [Extracellular structures];


:

Pssm-ID: 442355 [Multi-domain]  Cd Length: 237  Bit Score: 251.06  E-value: 1.25e-84
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488981554   1 MRRM----VLALLLSSYLPSADASMVIDGTRIIFSGDKKEIAVRATNMGETPSLTQVWVDDGRVQNQPEKDAAPFIVLPP 76
Cdd:COG3121    1 MKRLlrllLLALLLLLASAAAAAGISISPTRVIYPAGDKEASLTLTNTGDTPYLVQSWVDDWDQDAGPDKATAPFVVTPP 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488981554  77 IVRIEPGKGQSWRLVFNGSRLPQDRESLFWFNLLDIPPEPKNGKTDNYLQLAIRSRIKLFYRPAGVAAEKIAAEKALSWA 156
Cdd:COG3121   81 LFRLEPGKSQTVRIIRTGPPLPQDRESLFRLNVDEIPPKDASEEGKNTLQIALRTRIKLFYRPAGLKGSPEDAAEKLTWS 160

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 488981554 157 LapTGNGLRVSNASARYITIDSITLNGKKHA----AGMVAPFSSLEIAPKGVALRTLPAKFSFTTINDYGAVVNHNYP 230
Cdd:COG3121  161 L--VGNGLTVTNPGPYYVTLSDLSLGAGGKKlkkgLGMVLPGSTRRWPLPAGASLAAGGKVTWATINDYGGAVPLEAT 236
 
Name Accession Description Interval E-value
FimC COG3121
P pilus assembly protein, chaperone PapD [Extracellular structures];
1-230 1.25e-84

P pilus assembly protein, chaperone PapD [Extracellular structures];


Pssm-ID: 442355 [Multi-domain]  Cd Length: 237  Bit Score: 251.06  E-value: 1.25e-84
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488981554   1 MRRM----VLALLLSSYLPSADASMVIDGTRIIFSGDKKEIAVRATNMGETPSLTQVWVDDGRVQNQPEKDAAPFIVLPP 76
Cdd:COG3121    1 MKRLlrllLLALLLLLASAAAAAGISISPTRVIYPAGDKEASLTLTNTGDTPYLVQSWVDDWDQDAGPDKATAPFVVTPP 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488981554  77 IVRIEPGKGQSWRLVFNGSRLPQDRESLFWFNLLDIPPEPKNGKTDNYLQLAIRSRIKLFYRPAGVAAEKIAAEKALSWA 156
Cdd:COG3121   81 LFRLEPGKSQTVRIIRTGPPLPQDRESLFRLNVDEIPPKDASEEGKNTLQIALRTRIKLFYRPAGLKGSPEDAAEKLTWS 160

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 488981554 157 LapTGNGLRVSNASARYITIDSITLNGKKHA----AGMVAPFSSLEIAPKGVALRTLPAKFSFTTINDYGAVVNHNYP 230
Cdd:COG3121  161 L--VGNGLTVTNPGPYYVTLSDLSLGAGGKKlkkgLGMVLPGSTRRWPLPAGASLAAGGKVTWATINDYGGAVPLEAT 236
PRK09926 PRK09926
fimbrial chaperone;
7-228 1.20e-67

fimbrial chaperone;


Pssm-ID: 236634 [Multi-domain]  Cd Length: 246  Bit Score: 208.42  E-value: 1.20e-67
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488981554   7 ALLLSSylpSADASMVIDGTRIIFSGDKKEIAVRATNMGETPSLTQVWVDDGRVQNQPEKDAAPFIVLPPIVRIEPGKGQ 86
Cdd:PRK09926  16 CMAFSS---SSIADIVISGTRIIYKSDQKDVNVRLENKGNNPLLVQSWLDTGDDNAEPGSIKVPFTATPPVSRIDPKRGQ 92

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488981554  87 SWRLVFNGSR-LPQDRESLFWFNLLDIPPEPKNGKTDN--YLQLAIRSRIKLFYRPAGVAAEKIAAEKALSWALAPTGN- 162
Cdd:PRK09926  93 TIKLMYTASTaLPKDRESVFWFNVLEVPPKPDAEKVANqsLLQLAFRTRIKLFYRPDGLKGNPSEAPLALKWSWAGSEGk 172

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 488981554 163 -GLRVSNASARYITIDSITL--NGKKHA--AGMVAPFSSLEIAPKGVALRTLPAKFSFTTINDYGAVVNHN 228
Cdd:PRK09926 173 aSLRVTNPTPYYVSFSSGDLeaGGKRYPvdSKMIAPFSDESMKVKGLSGKASSGKVHFYAINDFGGAIEGN 243
PapD_N pfam00345
Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich ...
 21-142 1.86e-58

Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich fold. This domain is the n-terminal part of the PapD chaperone protein for pilus and flagellar assembly.


Pssm-ID: 425623  Cd Length: 123  Bit Score: 180.86  E-value: 1.86e-58
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488981554   21 MVIDGTRIIFSGDKKEIAVRATNMGETPSLTQVWVDDGRVQNQPEKDAAPFIVLPPIVRIEPGKGQSWRLVFNGSRLPQD 100
Cdd:pfam00345   1 VVLGGTRVIYPAGEKEASVTVSNTGDNPYLVQSWVDDGNEEGTDEKAKAPFIVTPPLFRLEPGQEQVLRIYTTGPPLPTD 80

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|..
gi 488981554  101 RESLFWFNLLDIPPEPKNGKTDNYLQLAIRSRIKLFYRPAGV 142
Cdd:pfam00345  81 RESLFWLNVLEIPPKDKPKGGQNGLQLALRSRIKLFYRPAGL 122
 
Name Accession Description Interval E-value
FimC COG3121
P pilus assembly protein, chaperone PapD [Extracellular structures];
1-230 1.25e-84

P pilus assembly protein, chaperone PapD [Extracellular structures];


Pssm-ID: 442355 [Multi-domain]  Cd Length: 237  Bit Score: 251.06  E-value: 1.25e-84
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488981554   1 MRRM----VLALLLSSYLPSADASMVIDGTRIIFSGDKKEIAVRATNMGETPSLTQVWVDDGRVQNQPEKDAAPFIVLPP 76
Cdd:COG3121    1 MKRLlrllLLALLLLLASAAAAAGISISPTRVIYPAGDKEASLTLTNTGDTPYLVQSWVDDWDQDAGPDKATAPFVVTPP 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488981554  77 IVRIEPGKGQSWRLVFNGSRLPQDRESLFWFNLLDIPPEPKNGKTDNYLQLAIRSRIKLFYRPAGVAAEKIAAEKALSWA 156
Cdd:COG3121   81 LFRLEPGKSQTVRIIRTGPPLPQDRESLFRLNVDEIPPKDASEEGKNTLQIALRTRIKLFYRPAGLKGSPEDAAEKLTWS 160

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 488981554 157 LapTGNGLRVSNASARYITIDSITLNGKKHA----AGMVAPFSSLEIAPKGVALRTLPAKFSFTTINDYGAVVNHNYP 230
Cdd:COG3121  161 L--VGNGLTVTNPGPYYVTLSDLSLGAGGKKlkkgLGMVLPGSTRRWPLPAGASLAAGGKVTWATINDYGGAVPLEAT 236
PRK09926 PRK09926
fimbrial chaperone;
7-228 1.20e-67

fimbrial chaperone;


Pssm-ID: 236634 [Multi-domain]  Cd Length: 246  Bit Score: 208.42  E-value: 1.20e-67
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488981554   7 ALLLSSylpSADASMVIDGTRIIFSGDKKEIAVRATNMGETPSLTQVWVDDGRVQNQPEKDAAPFIVLPPIVRIEPGKGQ 86
Cdd:PRK09926  16 CMAFSS---SSIADIVISGTRIIYKSDQKDVNVRLENKGNNPLLVQSWLDTGDDNAEPGSIKVPFTATPPVSRIDPKRGQ 92

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488981554  87 SWRLVFNGSR-LPQDRESLFWFNLLDIPPEPKNGKTDN--YLQLAIRSRIKLFYRPAGVAAEKIAAEKALSWALAPTGN- 162
Cdd:PRK09926  93 TIKLMYTASTaLPKDRESVFWFNVLEVPPKPDAEKVANqsLLQLAFRTRIKLFYRPDGLKGNPSEAPLALKWSWAGSEGk 172

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 488981554 163 -GLRVSNASARYITIDSITL--NGKKHA--AGMVAPFSSLEIAPKGVALRTLPAKFSFTTINDYGAVVNHN 228
Cdd:PRK09926 173 aSLRVTNPTPYYVSFSSGDLeaGGKRYPvdSKMIAPFSDESMKVKGLSGKASSGKVHFYAINDFGGAIEGN 243
PapD_N pfam00345
Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich ...
 21-142 1.86e-58

Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich fold. This domain is the n-terminal part of the PapD chaperone protein for pilus and flagellar assembly.


Pssm-ID: 425623  Cd Length: 123  Bit Score: 180.86  E-value: 1.86e-58
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488981554   21 MVIDGTRIIFSGDKKEIAVRATNMGETPSLTQVWVDDGRVQNQPEKDAAPFIVLPPIVRIEPGKGQSWRLVFNGSRLPQD 100
Cdd:pfam00345   1 VVLGGTRVIYPAGEKEASVTVSNTGDNPYLVQSWVDDGNEEGTDEKAKAPFIVTPPLFRLEPGQEQVLRIYTTGPPLPTD 80

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|..
gi 488981554  101 RESLFWFNLLDIPPEPKNGKTDNYLQLAIRSRIKLFYRPAGV 142
Cdd:pfam00345  81 RESLFWLNVLEIPPKDKPKGGQNGLQLALRSRIKLFYRPAGL 122
PRK15249 PRK15249
fimbrial chaperone;
1-230 1.05e-50

fimbrial chaperone;


Pssm-ID: 237930 [Multi-domain]  Cd Length: 253  Bit Score: 165.36  E-value: 1.05e-50
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488981554   1 MRRMVLALLLSSYLPSADASMVIDGTRIIFSGDKKEIAVRATNMGETPSLTQVWVDDGRVQNQPEKDAA-PFIVLPPIVR 79
Cdd:PRK15249  10 LYYLIVFLFLALPATASWASVTILGSRIIYPSTASSVDVQLKNNDAIPYIVQTWFDDGDMNTSPENSSAmPFIATPPVFR 89

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488981554  80 IEPGKGQSWRLVFNGSR-LPQDRESLFWFNLLDIPPEP-KNGKTDNYLQLAIRSRIKLFYRPAGVAAEKIAAEKALSWAL 157
Cdd:PRK15249  90 IQPKAGQVVRVIYNNTKkLPQDRESVFWFNVLQVPPTNiGSDSGQNKMLVMLRSRIKLFYRPDGLGKPDNLAKKLQIKTV 169

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488981554 158 --APTGNGLRVSNASARYITID--SITLNGKKHA--AGMVAPFSSLE-IAPKGVALRTLPAKFSFTTINDYGAVVNHNYP 230
Cdd:PRK15249 170 nkGSGKSGIVIVNPQPWFASLSnlNVKVNGASYNldADMIAPFSSQTwWLPGKRSLKSFSGTVTVTLVNDQGARISESYD 249
PRK15218 PRK15218
fimbrial assembly chaperone;
1-226 7.84e-46

fimbrial assembly chaperone;


Pssm-ID: 185140 [Multi-domain]  Cd Length: 226  Bit Score: 152.06  E-value: 7.84e-46
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488981554   1 MRRMVLALLLSSYLPsADASMVIDGTRIIFSGDKKEIAVRATNMGETPSLTQVWVDDGRVQNQPEKDAAPFIVLPPIVRI 80
Cdd:PRK15218   1 MKWMIALCLACAAMP-AWSGIYIYGTRIIYPAQKKDITVQLMNDGKRSSLIQAWIDNGDTSLPPEKLQVPFIMTPPVIRV 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488981554  81 EPGKGQSWRLVFNGSRLPQDRESLFWFNLLDIPPEPKNGKTDNYLQLAIRSRIKLFYRPAGVAAEKIAAEKALSWALAPt 160
Cdd:PRK15218  80 AANSGQQLKIKKLANNLPGDRESLFYLNVLDIPPNSDENKDKNIIKFALQNRIKLIYRPPGVQKVDKATFSRLQLLRAP- 158

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 488981554 161 gNGLRVSNASARYITIDSITLNGKKHAAGMV-APFSSleiapKGVALRTLPAKFSFTTINDYGAVVN 226
Cdd:PRK15218 159 -GSISVKNNSANWITIPEIKAKSKVNKETLLlAPWSS-----QSITTTVVVNSYTVTLIDDSGNYLN 219
lfpB PRK15290
fimbrial chaperone;
4-224 4.00e-42

fimbrial chaperone;


Pssm-ID: 237934 [Multi-domain]  Cd Length: 243  Bit Score: 143.21  E-value: 4.00e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488981554   4 MVLALLLSSyLPSADASMVIDGTRIIFSGDKKEIAVRATNMGET-PSLTQVWVDDGrvqNQPEKDAAPFIVLPPIVRIEP 82
Cdd:PRK15290  23 IILSVFLGQ-PALTYAGVVIGGTRVVYLSNNPDKSISVFSKEEKiPYLIQAWVDPF---NKEDKSKAPFTVIPPVSRLEP 98

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488981554  83 GKGQSWRLVFN-GSRLPQDRESLFWFNLLDIPPEPKNgKTDNYLQLAIRSRIKLFYRPAGVAAEKIAAEKALSWalAPTG 161
Cdd:PRK15290  99 SQEKVLRIIHTkGVSLPDDRESVFWLNIKNIPPSASN-KATNSLEIAVKTRIKLFWRPASIRLIPEDAAPKVKW--RREG 175

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 488981554 162 NGLRVSNASARYITIDSITLNGKKHAAGMVAPFSSLEIA-PKGVALRTLPAKFsfttINDYGAV 224
Cdd:PRK15290 176 RNLIAENPNPIHISVMDVIVDGHDVPLNMIRPFETLTLPlPANSAGGQMTWRF----INDYGAV 235
PRK15253 PRK15253
putative fimbrial assembly chaperone protein StcB; Provisional
 1-228 9.12e-42

putative fimbrial assembly chaperone protein StcB; Provisional


Pssm-ID: 185165 [Multi-domain]  Cd Length: 242  Bit Score: 142.11  E-value: 9.12e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488981554   1 MRRMVLALLLSSYLPsADASMVIDGTRIIFSGDKKEIAVRATNMGETPSLTQVWVDDGRVQNQPEKDAAPFIVLPPIVRI 80
Cdd:PRK15253  16 MKILSAVLLSAIILP-AHAGIVIYGTRVIYPAEKKEVVVQLVNQGEQASLVQSWIDDGNTSLPPEKIQVPFMLTPPVARV 94

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488981554  81 EPGKGQSWRLVFNGSRLPQDRESLFWFNLLDIPPEPKNGKTDNYLQLAIRSRIKLFYRPAGVAAEKIAAEKALswALAPT 160
Cdd:PRK15253  95 AAESGQQIKIKKMPNSLPDNKESLFYLNVLDIPPNSQENAGKNVLKFAMQNRIKLIWRPSRIAAVTKDSFQRI--GLFRS 172

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488981554 161 GNGLRVSNASARYITIDSITLNGKK--HAAGMVAPFSSLEIAPKGVALRtlpaKFSFTTINDYGAVVNHN 228
Cdd:PRK15253 173 NKTVIMKNDTANWITVTDVKAGNTKinDQTIMLPPLSTQNINMKYASTS----QYEVTIIDDNGNYISSK 238
PRK15295 PRK15295
fimbrial assembly chaperone;
5-222 9.07e-39

fimbrial assembly chaperone;


Pssm-ID: 237936 [Multi-domain]  Cd Length: 226  Bit Score: 133.92  E-value: 9.07e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488981554   5 VLALLLSSYLpsADASMVIDGTRIIFSGDKKEIAVRATNMGETPSLTQVWVDDGRVQNqPEKDAapFIVLPPIVRIEPGK 84
Cdd:PRK15295   7 VLVVLLTSHV--AHASIVVGGTRLVFDGNNDESSINVENKDSKANLVQSWLSVVDPQV-TNKQA--FIITPPLFRLDAGQ 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488981554  85 GQSWRLVFNGSRLPQDRESLFWFNLLDIPPEPKNgKTDNYLQLAIRSRIKLFYRPAGVAAEK-IAAEKALSWALAptGNG 163
Cdd:PRK15295  82 KNSIRVIRSGAPLPADRESMYWLNIKGIPSIDDN-ASANRVEISINTQIKLIYRPPALTKSTpDSQSQQLKWQTA--GDV 158

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 488981554 164 LRVSNASARYITIDSITLNGKK-HAAGMVAPFSSLEIAPKGVALRTlpAKFSFTTINDYG 222
Cdd:PRK15295 159 ITVNNPTPYYMNFASVTLNSHEvKSATFVPPKSSASFKLGSTAAPH--GTVTWRLISDYG 216
PRK15208 PRK15208
molecular chaperone LpfB;
1-223 1.31e-38

molecular chaperone LpfB;


Pssm-ID: 237925 [Multi-domain]  Cd Length: 228  Bit Score: 133.50  E-value: 1.31e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488981554   1 MRRM---VLALLLSSylPSADASMV-IDGTRIIFSGDKKEIAVRATNMGETPS-LTQVWVDDGrvqNQPEKdaAPFIVLP 75
Cdd:PRK15208   1 MRLIsftALALALIA--QNSFAGGVaLSSTRVIYDGSKKEASLTVNNKSKTEEfLIQSWIDDA---NGNKK--TPFIITP 73

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488981554  76 PIVRIEPGKGQSWRLVFNGSRLPQDRESLFWFNLLDIPPEPKNGKTDNYLQLAIRSRIKLFYRPAGVAAEKIAAEKALSW 155
Cdd:PRK15208  74 PLFKLDPTKNNVLRIVNITNTLPQDRESVYWINVKAIPAKSEDAENKNVLQIAVRTRLKLFYRPAGLKGNSMDAWNKLRF 153

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 488981554 156 ALAptGNGLRVSNASARYITIDSITLNGKK-HAAGMVAPFSSLEIapkgvalrTLPA------KFSFTTINDYGA 223
Cdd:PRK15208 154 TRA--GNQIKVENPSAFNLTFNQFYANGRDiEKAGMVPAKGSLNI--------ELPAgtgkvsEVKYNIINDFGT 218
PRK15195 PRK15195
molecular chaperone FimC;
4-224 2.58e-37

molecular chaperone FimC;


Pssm-ID: 185117 [Multi-domain]  Cd Length: 229  Bit Score: 130.37  E-value: 2.58e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488981554   4 MVLALLLSSYLPSADASMVIDGTRIIFSGDKKEIAVRATNMGETPS-LTQVWVDDGRvqNQPEKDaapFIVLPPIVRIEP 82
Cdd:PRK15195  10 IIIFYLIISASVHAAGGIALGATRVIYPADAKQTSLAIRNSHTNERyLVNSWIENSS--GVKEKS---FIVTPPLFVSEP 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488981554  83 GKGQSWRLVFNGSRLPQDRESLFWFNLLDIPPEPKNG-KTDNYLQLAIRSRIKLFYRPAGVAAEKIAAEKALSWALAptG 161
Cdd:PRK15195  85 KSENTLRIIYAGPPLAADRESLFWMNVKAIPSVDKNAlEGRNVLQLAILSRIKLFVRPINLQELPEEAPDTLKFSRS--G 162

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 488981554 162 NGLRVSNASARYITIDSITLNGKKHAAGMVAPFSSLEIA-PKGVAlrtlpAKFSFTTINDYGAV 224
Cdd:PRK15195 163 NHLKVHNPSPYYVTLVNLQVGSQKLGNAMIAPKVNSQIPlPSGVQ-----GKLKFQTVNDYGAV 221
PRK15246 PRK15246
fimbrial assembly chaperone;
15-222 6.58e-36

fimbrial assembly chaperone;


Pssm-ID: 185158 [Multi-domain]  Cd Length: 233  Bit Score: 126.61  E-value: 6.58e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488981554  15 PSADASMVIDGTRIIFSGDKKEIAVRATNMGETPSLTQVWVDDGRVQNQPEKDAAPFIVLPPIVRIEPGKGQSWRLVFNG 94
Cdd:PRK15246   6 GPAQAAVNIDRTRIIFASDDVAQSLTLSNDNTTPMLLQVWTDAGNIDASPDNSKTPLVALPPVFKMQPGELRTLRLLLSS 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488981554  95 SR-LPQDRESLFWFNLLDIPPEPKN-GKTDNYLQLAIRSRIKLFYRPAGVAAEKIAAEKALSWALAPtgNGLRVSNASAR 172
Cdd:PRK15246  86 RQqLATDRESLFWLNIYQIPPVTQDiKNHPRKLVLPLRLRLKILIRPTGLKAPTEAEEKKLRFIAKE--NTIRIVNPTSW 163

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|
gi 488981554 173 YITIDSITLNGKKHAAGMVAPFSSLEIAPKgvALRTLPAKFSFTTINDYG 222
Cdd:PRK15246 164 YMSLTLTMDNKKSIGDIMVAPKTALDVPLT--RSPTPGASINYAVINDSG 211
PRK15211 PRK15211
fimbrial chaperone;
1-227 1.86e-32

fimbrial chaperone;


Pssm-ID: 185133 [Multi-domain]  Cd Length: 229  Bit Score: 117.62  E-value: 1.86e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488981554   1 MRRMVLALLLSSYLPS-ADASMVIDGTRIIFSGDKKEIAVRATNMGETPSLTQVWVDDgrvQNQPEKDAApFIVLPPIVR 79
Cdd:PRK15211   3 MMKWGLVSLLSLAVCGqAMAAFVLNGTRFIYDEGRKNISFEVTNQADQTYGGQVWIDN---TTQGSSTVY-MVPAPPFFK 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488981554  80 IEPGKGQSWRLVFNGSRLPQDRESLFWFNLLDIPPEPKNGKTdNYLQLAIRSRIKLFYRPAGVAAEKIAAEKALSwaLAP 159
Cdd:PRK15211  79 VRPKEKQIIRIMKTDSALPKDRESLFWLNVQEIPPKPKASEG-NVLAVALNTQVKLIYRPKALKEGRENAEKNLQ--IIH 155

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 488981554 160 TGNGLRVSNASARYITIDSITLNGK--------KHAAGMVAPFSSLEIAPKgvalrTLPAKFSFTTINDYGAVVNH 227
Cdd:PRK15211 156 RGGETYLKNPTPYYFAVTGVKLNGQpvklsdrvMNEIAQLAPFSEVSLGKL-----SLNGTVTVQAVNDWGGTQDY 226
PRK15285 PRK15285
fimbrial chaperone StfD;
5-223 1.33e-31

fimbrial chaperone StfD;


Pssm-ID: 185185 [Multi-domain]  Cd Length: 250  Bit Score: 116.03  E-value: 1.33e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488981554   5 VLALLLSSYlPSADASMVIDGTRIIFSGDKKEIAVRATNM-GETPSLTQVWVDDgrvqNQPEKDAAPFIVLPPIVRIEPG 83
Cdd:PRK15285  12 VLLLLLGGY-GSAQAAIAPDRTRLVFRGEDKSISVDLKNAnSKLPYLAQSWVED----EKGVKITSPLIVVPPVQRIEPS 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488981554  84 K-GQswrLVFNG----SRLPQDRESLFWFNLLDIPPEpknGKTDNYLQLAIRSRIKLFYRPAGVAAEKIAAEKALSWALA 158
Cdd:PRK15285  87 AiGQ---VKIQGmpalASLPQDRETLFYYNVREIPPQ---SDKPNTLQIALQTRIKVFYRPQALSKIDMQHPWQYKITLQ 160

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 488981554 159 PTGNGLRVSNASARYITIDsitlNGKKHAAGMVAP-FSSLEIAPK-----GVALRTLPAKFSFTTINDYGA 223
Cdd:PRK15285 161 RQGNGYQVSNPTGYYVVLS----NASNRMDGTPARgFSPLVIAPKsnvtlGGDASELGHSPVLTYVNDYGA 227
PRK15299 PRK15299
fimbrial chaperone protein StiB; Provisional
 5-223 5.79e-30

fimbrial chaperone protein StiB; Provisional


Pssm-ID: 185199 [Multi-domain]  Cd Length: 227  Bit Score: 111.03  E-value: 5.79e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488981554   5 VLALLLSSYLPSAdASMVIDGTRIIFSGDKKEIAVRATNMGETPSLTQVWVDDgrVQNQPEKDAAPFIVLPPIVRIEPGK 84
Cdd:PRK15299   9 LLCCLLCGSLAHA-AGINIGTTRVIFHGDAKDASISISNSDNVPYLIQSWAQS--ISETGASGDAPFMVTPPLFRLNGGQ 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488981554  85 GQSWRLVFNGSRLPQDRESLFWFNLLDIPPEPKNGKtDNYLQLAIRSRIKLFYRPAGVAAEKIAAEKALSWalAPTGNGL 164
Cdd:PRK15299  86 KNVLRIIRTGGNLPEDRESLYWLDIKSIPSSNPDNK-HNTLMLAVKAEFKLIYRPKALTQKPEEVADRLTW--SRQGRTL 162

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 488981554 165 RVSNASARYITIDSITLNGKK-HAAGMVAPFssleiapkGVALRTLPAKFS----FTTINDYGA 223
Cdd:PRK15299 163 TVKNPTPYYMNFATLSVGSQKvKAPRYVAPF--------GNAQYTLPAAASgpiaWSIINDFGG 218
PRK15274 PRK15274
putative periplasmic fimbrial chaperone protein SteC; Provisional
 4-223 1.40e-27

putative periplasmic fimbrial chaperone protein SteC; Provisional


Pssm-ID: 185177 [Multi-domain]  Cd Length: 257  Bit Score: 105.63  E-value: 1.40e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488981554   4 MVLALLLSSYLPSADAsMVIDGTRIIFSGDKKEIAVRATNMGET-PSLTQVWVDDGRVQnqpeKDAAPFIVLPPIVRIEP 82
Cdd:PRK15274  12 LIASVLLAAPLVSHSA-IVPDRTRVIFNGNENSITVTLKNGNATlPYLAQAWLEDDKFA----KDTRYFTALPPLQRIEP 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488981554  83 GKGQSWRL--VFNGSRLPQDRESLFWFNLLDIPPepkngKTD--NYLQLAIRSRIKLFYRPAGVAAEKIAAEK-ALSWAL 157
Cdd:PRK15274  87 KSDGQVKVqpLPAAASLPQDRESLFYFNVREIPP-----KSDkpNTLQLALQTRIKFFYRPVAVARQVDKTHPwQTKLTL 161

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488981554 158 APTGNGLRVSNASARYITIDSITLNGKKHAAG----MVAPFSSLEIAPKGVALRTLPAkfsFTTINDYGA 223
Cdd:PRK15274 162 TYQGDGVIFDNPTPFYLVISNAGSKENETASGfknlLIAPREKVTSPIKGASLGSSPV---VGYVDDYGG 228
PRK15192 PRK15192
pili/flagellar-assembly chaperone;
17-225 2.75e-25

pili/flagellar-assembly chaperone;


Pssm-ID: 185114 [Multi-domain]  Cd Length: 234  Bit Score: 99.01  E-value: 2.75e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488981554  17 ADASMVIDGTRIIFSGDKKEIAVRATNMGETPSL--TQVWVDDGRVQNQPEKDAAPFIVLPPIVRIEPGKGQSWRLVFNG 94
Cdd:PRK15192  20 AQAGVVIGGTRFIYHAGAPALSVPVSNHSEASWLidTHILPGGRWPGTKNEGNITPFVVTPPLFMLSARQENSMRVVYTG 99

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488981554  95 SRLPQDRESLFWFNLLDIPpepkNGKTD-NYLQLAIRSRIKLFYRPAGVAAEKIAAEKALSWALAPTGNGLRvsNASARY 173
Cdd:PRK15192 100 APLPADRESLFTLSIAAIP----SGKPEaNRVQMAFRSALKLLYRPEGLAGNPQQAYRHLIWSLTPDGATVR--NPTPYY 173

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|...
gi 488981554 174 ITIDSITLNGK-KHAAGMVAPFSSLEiapKGVALRTLPAKFSFTTINDYGAVV 225
Cdd:PRK15192 174 VTLFLLRANERaQDNAGVVAPFATRQ---TDWCRHTVRCTVRWQSINDYGRVM 223
PRK15254 PRK15254
fimbrial chaperone protein StdC; Provisional
 4-229 1.10e-24

fimbrial chaperone protein StdC; Provisional


Pssm-ID: 185166 [Multi-domain]  Cd Length: 239  Bit Score: 97.54  E-value: 1.10e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488981554   4 MVLALLLSSYLPSADASMVIDGTRIIFSGDKKEIAVRATNMGET-PSLTQVWVDDGrvqNQPEKDAapFIVLPPIVRIEP 82
Cdd:PRK15254   1 VILLALAAAWSQYSPAAVNVDRTRIIMDAPQKTVAITLNNDDKTtPFLAQSWVTDA---DGVRTDA--LMALPPLQRIDA 75

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488981554  83 GKGQSWRLV-FNG--SRLPQDRESLFWFNLLDIPPEPKNgktDNYLQLAIRSRIKLFYRPAGVAAEKIAAEKALSWALAP 159
Cdd:PRK15254  76 GQKSQVRITqVRGltDKLPQDRETLFWFNVRGVPPKPED---DNVLQLAMQSQLKLFYRPKAIIRSSSDQPERKLTAERN 152

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 488981554 160 TGNgLRVSNASARYITIDSITLNGKKHAAG-----MVAPFSSLEI-APKGVALRTLPAKFsfttINDYGAVVNHNY 229
Cdd:PRK15254 153 AGH-LTLRNPTPYYITVAWLGADRSHRLSGfregvMVPPLGSLPLkAVLPAETRTLWVGY----IDDYGGLQMNRY 223
PRK11385 PRK11385
fimbrial chaperone;
5-224 1.07e-22

fimbrial chaperone;


Pssm-ID: 183112 [Multi-domain]  Cd Length: 236  Bit Score: 92.12  E-value: 1.07e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488981554   5 VLALLLSSYLpsaDASMVIDGTRIIFSGDKKEIAVRATNMGEtpsltQVWVDDGRVqNQPEKDA--------APFIVLPP 76
Cdd:PRK11385  15 VLSLLVAGEL---QAGVVVGGTRFIFPADRESISILLTNTSQ-----ESWLINSKI-NRPTRWAggeastvpAPLLAAPP 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488981554  77 IVRIEPGKGQSWRLVFNGSR-LPQDRESLFWFNLLDIPpepkNGKTDNY-LQLAIRSRIKLFYRPAGVAAEKIAAEKALS 154
Cdd:PRK11385  86 LILLKPGTTGTLRLLRTESDiLPVDRETLFELSIASVP----SGKVENQsVKVAMRSVFKLFWRPEGLPGDPLEAYQQLR 161

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 488981554 155 WALapTGNGLRVSNASARYITIDSITLNGKKHA-AGMVAPFSSLEIApkgVALRTLPAKFSFTTINDYGAV 224
Cdd:PRK11385 162 WTR--NSQGVQLTNPTPYYINLIQVSVNGKALSnAGVVPPKSQRQTS---WCQAIAPCHVAWRAINDYGGL 227
PRK15188 PRK15188
fimbrial chaperone protein BcfB; Provisional
 6-223 1.74e-20

fimbrial chaperone protein BcfB; Provisional


Pssm-ID: 185110 [Multi-domain]  Cd Length: 228  Bit Score: 86.36  E-value: 1.74e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488981554   6 LALLLSS---YLPSADASMVIDGTRIIFSGDKKEIAVRATNMGETPS-LTQVWVddgrvQNQPEKDAAPFIVLPPIVRIE 81
Cdd:PRK15188  11 LLLLLSAaglSFAAQAGGIALGATRVIYPQGSKQTSLPIINSSASNVfLIQSWV-----ANADGSRSTDFIITPPLFVIQ 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488981554  82 PGKGQSWRLVFNGSRLPQDRESLFWFNLLDIPPEPKNGKTDNYLQLAIRSRIKLFYRPAGVAAEKIAAEKALSwaLAPTG 161
Cdd:PRK15188  86 PKKENILRIMYVGPSLPTDRESVFYLNSKAIPSVDKNKLTGNSLQIATQSVIKLFIRPKNLAEAPAHAPSTLR--CRNER 163

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 488981554 162 NGLRVSNASARYITIDSITLNGKKHAAGMVAPFSSleiapkgVALRTLPAKFSFTTINDYGA 223
Cdd:PRK15188 164 GQLTITNPSPYYVSMVELYSAGKKLPNTMVPPKGA-------ITLPATPGQVSLRTVNDFGA 218
PRK15224 PRK15224
pili assembly chaperone PapD;
20-201 3.73e-19

pili assembly chaperone PapD;


Pssm-ID: 185146 [Multi-domain]  Cd Length: 237  Bit Score: 82.87  E-value: 3.73e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488981554  20 SMVIDGTRIIFSGDKKEIAVRATNMGETPSLTQvwvddGRVQNQPEKDAAPFIVLPPIVRIEPGKGQSWRLVFNGSRLPQ 99
Cdd:PRK15224  29 SVKLGATRVIYHAGTAGATLSVSNPQNYPILVQ-----SSVKAADKSSPAPFLVMPPLFRLEANQQSQLRIVRTGGDMPT 103

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488981554 100 DRESLFWFNLLDIPPEPKNGKTDNY-----LQLAIRSRIKLFYRPAGVAAEKIAAEKALSWalAPTGNGLRVSNASARYI 174
Cdd:PRK15224 104 DRETLQWVCIKAVPPENEPSDTQAKgatldLNLSINVCDKLIFRPDAVKGTPEDVAGNLRW--VETGNKLKVENPTPFYM 181

                        170       180
                 ....*....|....*....|....*..
gi 488981554 175 TIDSITLNGKkhaagmvaPFSSLEIAP 201
Cdd:PRK15224 182 NLASVTVGGK--------PITGLEYIP 200
PRK15233 PRK15233
fimbrial chaperone SefB;
26-229 2.37e-15

fimbrial chaperone SefB;


Pssm-ID: 185149 [Multi-domain]  Cd Length: 246  Bit Score: 72.83  E-value: 2.37e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488981554  26 TRIIFSGDKKEIAVRATNMGETPSLTQVwvddgRVQNQPEKDAAPFIVLPPIVRIEPGKGQSWRLVFNGSRLPQDRESLF 105
Cdd:PRK15233  47 TRVIYKEDAPSTSFWIMNEKEYPILVQT-----QVYNDDKSSKAPFIVTPPILKVESNARTRLKVIPTSNLFNKNEESLY 121

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488981554 106 WFNLLDIPP------EPKNGKTDNY-LQLAIRSRIKLFYRPAGVAAEKIAAEKALSwaLAPTGNGLRVSNASARYITIDS 178
Cdd:PRK15233 122 WLCVKGVPPlndnesNNKNNITTNLnVNVVTNSCIKLIYRPKTIDLTTMEIADKLK--LERKGNSIVIKNPTSSYVNIAN 199

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|...
gi 488981554 179 ITLNGKKH--AAGMVAPFSSLEIaPKGVAlrtlpAKFSFTTINDYGAVVNHNY 229
Cdd:PRK15233 200 IKSGNLSFniPNGYIEPFGYAQL-PGGVH-----SKITLTILDDNGAEIIRDY 246
PapD_C pfam02753
Pili assembly chaperone PapD, C-terminal domain; Ig-like beta-sandwich fold. This domain is ...
 166-225 3.63e-13

Pili assembly chaperone PapD, C-terminal domain; Ig-like beta-sandwich fold. This domain is the C-terminal part of the pilus and flagellar-assembly chaperone protein PapD.


Pssm-ID: 426960 [Multi-domain]  Cd Length: 63  Bit Score: 62.28  E-value: 3.63e-13
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 488981554  166 VSNASARYITIDSITLNGKKH----AAGMVAPFSSLEIAPKGVAlrTLPAKFSFTTINDYGAVV 225
Cdd:pfam02753   1 VKNPTPYYVTFSSLSLGGGGKelalDPGMVAPFSSQTFAGLPAP--AAGGTVSYTYINDYGGIV 62
PRK09918 PRK09918
putative fimbrial chaperone protein; Provisional
 2-171 9.53e-10

putative fimbrial chaperone protein; Provisional


Pssm-ID: 236632 [Multi-domain]  Cd Length: 230  Bit Score: 56.59  E-value: 9.53e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488981554   2 RRMVLALLLSSYLPSADASMVIDGTRIIFSGDKKEIAVRATNMGETPSLTQVwvddgRVQNQPEKDAAPFIVLPPIVRIE 81
Cdd:PRK09918   7 FLFTALVLLSSSSAVHAAGMVPETSVVIVEESDGEGSINVKNTDSNPILLYT-----TLVDLPEDKSKLLLVTPPVARVE 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488981554  82 PGKGQSWRLVFNGSRlPQDRESLFWFNLLDIPPEPKNgktDNYLQLAIRSRIKLFYRPAGVaAEKIAAEKALSWALapTG 161
Cdd:PRK09918  82 PGQSQQVRFILKSGS-PLNTEHLLRVSFEGVPPKPGG---KNKVVMPIRQDLPVLIQPAAL-PVVRDPWKLLVWSI--SG 154

                        170
                 ....*....|
gi 488981554 162 NGLRVSNASA 171
Cdd:PRK09918 155 NNLVVSNPSP 164
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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