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Conserved domains on  [gi|488982061|ref|WP_002892882|]
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MULTISPECIES: TonB-dependent siderophore receptor [Klebsiella]

Protein Classification

TonB-dependent receptor( domain architecture ID 11469157)

TonB-dependent receptor interacts with outer membrane receptor proteins that carry out high-affinity binding and energy-dependent uptake of specific substrates into the periplasmic space

CATH:  2.40.170.20
Gene Ontology:  GO:0015343|GO:0009279|GO:0038023
PubMed:  14665678|12409204|15993072|21455261
SCOP:  4003084
TCDB:  1.B.14

Graphical summary

 Zoom to residue level

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List of domain hits

 Name Accession Description Interval E-value
Fiu COG4774
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism];
78-732 0e+00

Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism];


:

Pssm-ID: 443806 [Multi-domain]  Cd Length: 639  Bit Score: 540.24  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061  78 LGEQKAMDVPFNVIGYTSKLIQDQQAKTIADVVSNDAGVQAVQGYGNFAETYRIRGFKlDGDDMTMGGLAgVVPRQVMDT 157
Cdd:COG4774    1 KTDTPLLDTPQSVTVVTRELIEDQGATSLADALRNVPGVTFGAGEGGNGDSFSIRGFS-ASGDIYVDGLR-DPGQYRRDT 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 158 QMLERVEIFKGANSLLNGAASsgVGGMINLEPKRAEDLPTARVGVDYTSDSQVGGTLDLGRRFGDNnqFGARVNLVHREG 237
Cdd:COG4774   79 FNLERVEVLKGPASVLYGRGS--PGGVINLVTKRPTDEPFTEVTLTYGSDGQRRATLDVNGPLGDD--LAYRLNGMYRDS 154

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 238 EGAIDNDKRRTTLASLGLDYR-GDRFRSSLDFGYQKK--TFHGGTMGVNISGvdfiPALPDNSKNYSQKWGYSDIESEFG 314
Cdd:COG4774  155 DSYRDGVDNDRWGIAPSLTWRlGDRTRLTLDYEYQDDdrTPDYGVPAVANGR----PVDVDRSTFYGQPDDYSDSETDSA 230

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 315 MAKAEYDLTDSWTVYSALGGQHSHEIGTYSAPKLLNKNGDATVGRLDTNRIIDAISGMGGVRGDFNTGAISHKVNLGY-A 393
Cdd:COG4774  231 TLRLEHDFNDNWTLRNALRYSDYDRDYRNTYPTGGNATGTVTRSAYRRDQDNDTLSNQTDLTGKFDTGGVKHTLLAGVeY 310

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 394 AQVHTDATAWRMSARNPTTNIYDNHdvamPDNAYFGGNYHDPLVTSRSRTQGWLLSDTLGfFNDKVLFTAAARHQKVVVR 473
Cdd:COG4774  311 SREDSDNARYSGGGTAPTVNLYNPV----YGAPVTGPTLGGADNDSRTDTTGLYLQDTIS-LTDRWSLLAGLRYDRFDTD 385

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 474 NYSNATGleDTSSRYTQSRWMPTFGLVYKPWEQLSLYANHTEALQPGSVAPtTAANAGQSTGIAHSKQDEVGVKIDY--G 551
Cdd:COG4774  386 YTDRTTG--ATTSSYDDSAFSPRAGLVYKPTPNLSLYASYSTSFNPGGGAP-SLSNAGQALDPEKSRQYEVGVKWDLldG 462

                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 552 TIGGSLALFEIKKPNAIS---DTAGNYGLDGEQRNRGVEMNVFGEPMLGLRLNASTVWLDAKQTKTAEGATDGKDAIGVA 628
Cdd:COG4774  463 RLSLTAALFRIEKTNVRTtdpANPGVYVQTGEQRSRGVELEATGELTPGWSVLAGYTYLDAEITKSANAANVGNRLPNVP 542

                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 629 NFYAVLGAEYDIkPVEGLTATARVNHSGSQYADAANTKKLDSYTTLDLGLRYRMRLNADqnemiWRVGVTNVTNEKYWSG 708
Cdd:COG4774  543 RHSASLWTTYDL-PLPGLTLGGGVRYVGSRYADAANTVKLPSYTRFDAGASYRLNKNLT-----LRLNVNNLTDKRYYAS 616

                        650       660
                 ....*....|....*....|....
gi 488982061 709 IDDTGtYLFEGDPRTVRVSMSYDF 732
Cdd:COG4774  617 AYGSG-YVTPGAPRTVLLSASYRF 639
 
Name Accession Description Interval E-value
Fiu COG4774
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism];
78-732 0e+00

Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism];


Pssm-ID: 443806 [Multi-domain]  Cd Length: 639  Bit Score: 540.24  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061  78 LGEQKAMDVPFNVIGYTSKLIQDQQAKTIADVVSNDAGVQAVQGYGNFAETYRIRGFKlDGDDMTMGGLAgVVPRQVMDT 157
Cdd:COG4774    1 KTDTPLLDTPQSVTVVTRELIEDQGATSLADALRNVPGVTFGAGEGGNGDSFSIRGFS-ASGDIYVDGLR-DPGQYRRDT 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 158 QMLERVEIFKGANSLLNGAASsgVGGMINLEPKRAEDLPTARVGVDYTSDSQVGGTLDLGRRFGDNnqFGARVNLVHREG 237
Cdd:COG4774   79 FNLERVEVLKGPASVLYGRGS--PGGVINLVTKRPTDEPFTEVTLTYGSDGQRRATLDVNGPLGDD--LAYRLNGMYRDS 154

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 238 EGAIDNDKRRTTLASLGLDYR-GDRFRSSLDFGYQKK--TFHGGTMGVNISGvdfiPALPDNSKNYSQKWGYSDIESEFG 314
Cdd:COG4774  155 DSYRDGVDNDRWGIAPSLTWRlGDRTRLTLDYEYQDDdrTPDYGVPAVANGR----PVDVDRSTFYGQPDDYSDSETDSA 230

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 315 MAKAEYDLTDSWTVYSALGGQHSHEIGTYSAPKLLNKNGDATVGRLDTNRIIDAISGMGGVRGDFNTGAISHKVNLGY-A 393
Cdd:COG4774  231 TLRLEHDFNDNWTLRNALRYSDYDRDYRNTYPTGGNATGTVTRSAYRRDQDNDTLSNQTDLTGKFDTGGVKHTLLAGVeY 310

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 394 AQVHTDATAWRMSARNPTTNIYDNHdvamPDNAYFGGNYHDPLVTSRSRTQGWLLSDTLGfFNDKVLFTAAARHQKVVVR 473
Cdd:COG4774  311 SREDSDNARYSGGGTAPTVNLYNPV----YGAPVTGPTLGGADNDSRTDTTGLYLQDTIS-LTDRWSLLAGLRYDRFDTD 385

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 474 NYSNATGleDTSSRYTQSRWMPTFGLVYKPWEQLSLYANHTEALQPGSVAPtTAANAGQSTGIAHSKQDEVGVKIDY--G 551
Cdd:COG4774  386 YTDRTTG--ATTSSYDDSAFSPRAGLVYKPTPNLSLYASYSTSFNPGGGAP-SLSNAGQALDPEKSRQYEVGVKWDLldG 462

                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 552 TIGGSLALFEIKKPNAIS---DTAGNYGLDGEQRNRGVEMNVFGEPMLGLRLNASTVWLDAKQTKTAEGATDGKDAIGVA 628
Cdd:COG4774  463 RLSLTAALFRIEKTNVRTtdpANPGVYVQTGEQRSRGVELEATGELTPGWSVLAGYTYLDAEITKSANAANVGNRLPNVP 542

                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 629 NFYAVLGAEYDIkPVEGLTATARVNHSGSQYADAANTKKLDSYTTLDLGLRYRMRLNADqnemiWRVGVTNVTNEKYWSG 708
Cdd:COG4774  543 RHSASLWTTYDL-PLPGLTLGGGVRYVGSRYADAANTVKLPSYTRFDAGASYRLNKNLT-----LRLNVNNLTDKRYYAS 616

                        650       660
                 ....*....|....*....|....
gi 488982061 709 IDDTGtYLFEGDPRTVRVSMSYDF 732
Cdd:COG4774  617 AYGSG-YVTPGAPRTVLLSASYRF 639
TonB-siderophor TIGR01783
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of ...
 85-732 3.50e-116

TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of TonB-dependent outer membrane siderophore receptors. It has no overlap with TonB receptors known to transport other substances, but is likely incomplete due to lack of characterizations. It is likely that genuine siderophore receptors will be identified which score below the noise cutoff to this model at which point the model should be updated. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]


Pssm-ID: 273805 [Multi-domain]  Cd Length: 651  Bit Score: 364.04  E-value: 3.50e-116
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061   85 DVPFNVIGYTSKLIQDQQAKTIADVVSNDAGVQAV-QGYGNFAETYRIRGFKL--DGDDMTMGGLAGVVP--RQVMDTQM 159
Cdd:TIGR01783   1 DIPQSVSVITRQELEDQQAGSLSEALQRVPGVVVGgSGGTTQFGNITIRGFGLevDIDNVYLDGVPLLSRgnLAIVDPAM 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061  160 LERVEIFKGANSLLNGaaSSGVGGMINLEPKRAEDLPTARVGVDYTSDSQVGGTLDLGRRFGDNNQFGARVNLVHREGEG 239
Cdd:TIGR01783  81 VERVEVLRGPASLLYG--GSAPGGVINIVTKRPQDEPKGSVTFGAGTRSGYRTAFDLGGPLGADGTFRGRLNGARQDGDS 158

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061  240 AIDNDKRRTTLASLGLDYR-GDRFRSSLDFGYQKKTFHGGTMGVNISGVDFIPALP-DNSKNYSQKWGYSDIESEFGMAK 317
Cdd:TIGR01783 159 FYDGAGEETRLGATATDWQlDDRTLLRLGAYYQKERDRGGYGGLPASGGTSGRDLSsDRYLGTSSNRNYDDREYLSYGLS 238

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061  318 AEYDLTDSWTVYSALGGQHSHEIGTYS-APKLLNKNGDATVGRLDTNRIIDAISGMGGVRGDFNTGAISHKVNLGYAAQv 396
Cdd:TIGR01783 239 LEYQFNDVWTGKQNLRYSYFDTDSNQVqASGYSSDGGLFGRSLTVVNVKQDRVQIDAGLDGEFETGPIEHDLLLGVSYG- 317

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061  397 hTDATAWRMSARNPTTNIY--DNHDVAMPDNAYFggnYHDPLVTSRSRTQGwLLSDTLGFFNDKVLFTAAARHQKVVVRN 474
Cdd:TIGR01783 318 -QRTTNRFNNTGYPSDNIYslTATSSARTDIGDS---PKDRALSSTTKALN-GVALQRILLADKWTLTLGGRYDSVDVKS 392

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061  475 YSNATGLEDTSSrytQSRWMPTFGLVYKPWEQLSLYANHTEALQPGSVAPTTAANAGQSTGIAHSKQDEVGVKIDYGT-I 553
Cdd:TIGR01783 393 NNGVAGSTGKRD---DSQFTPSLGVAYKPTDDWSLYASYAESFKPGGYYPKGAGNSGDILEPEKGKNYELGVRYDLGDsL 469

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061  554 GGSLALFEIKKPNAI---SDTAGNYGLDGEQRNRGVEMNVFGEPMLGLRLNASTVWLDAKQTKTAEGATDGKDAIGVANF 630
Cdd:TIGR01783 470 LATAALFRITKDNQLvqdPVNGTFSVNAGKTRNRGVELEARGYLTPGLSLSAGYTYTDAEFTEDTNGDTQGNTVPFVPKH 549

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061  631 YAVLGAEYDIKPVE-GLTATARVNHSGSQYADAANTKKLDSYTTLDLGLRYRMRLNADqneMIWRVGVTNVTNEKYW--S 707
Cdd:TIGR01783 550 TASLWASYAPPVGDnGLTLGGGVQYTGKAYVDGGNTGKVPSYTVVDLSVRYDLTKKKN---LTLALNVNNLFDRDYYtsG 626

                         650       660
                  ....*....|....*....|....*
gi 488982061  708 GIDDTGTYLFEGDPRTVRVSMSYDF 732
Cdd:TIGR01783 627 YRWGPSAYIYPGAPRTVGLSVSYDF 651
ligand_gated_channel cd01347
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ...
 89-732 9.91e-97

TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.


Pssm-ID: 238657 [Multi-domain]  Cd Length: 635  Bit Score: 312.46  E-value: 9.91e-97
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061  89 NVIGYTSKLIQDQQAKTIADVVSNDAGVQAVQGYGNFAETYRIRGFKLDGDDMTMGGL-------AGVVPRQVMDTQMLE 161
Cdd:cd01347    1 SVSVITAEDIEKQPATSLADLLRRIPGVSVTRGGGGGGSTISIRGFGPDRTLVLVDGLplassnyGRGVDLNTIPPELIE 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 162 RVEIFKGANSLLNGaaSSGVGGMINLEPKRAEDLPTARVGVDYTSD---SQVGGTLDLGRRFGDNNQFGARVNLVHREGE 238
Cdd:cd01347   81 RVEVLKGPSSALYG--SGAIGGVVNIITKRPTDEFGGSVTAGYGSDnsgSSGGGGFDVSGALADDGAFGARLYGAYRDGD 158

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 239 GAIDND------KRRTTLASLGLDYRG-DRFRSSLDFGYQKKTFHGGTMGVNI-SGVDFIPALPDNSKNYSQKWGYSDIE 310
Cdd:cd01347  159 GTIDGDgqaddsDEERYNVAGKLDWRPdDDTRLTLDAGYQDQDADGPGGTLPAnGTGSSLGGGPSSNTNGDRDWDYRDRY 238

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 311 SEFGMAKAEYDLTD-SWTVYSALGGQHSHEIGTYSAPKLLNKN--GDATVGRLDTNRIIDAISGMGGVRGDFNTGAISHK 387
Cdd:cd01347  239 RKRASLGLEHDLNDtGWTLRANLSYSYTDNDGDPLILNGGNNAagGDLGRSGYSSERDTTQLGFDAGLNAPFGTGPVAHT 318

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 388 VNLGYAAQVHtdatawrmsarnpttniydnhdvampdnayfggnyhdplvTSRSRTQGWLLSDTLgFFNDKVLFTAAARH 467
Cdd:cd01347  319 LTLGVEYRRE----------------------------------------ELDEKQTALYAQDTI-ELTDDLTLTLGLRY 357

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 468 QKVVVRNYSNATGleDTSSRYTQSRWMPTFGLVYKPWEQLSLYANHTEALQPGSVAPTTAANAGQSTGIA--------HS 539
Cdd:cd01347  358 DHYDQDSKDTIAG--GTTAKKSYSHWSPSLGLVYKLTDGLSLYASYSQGFRAPSLGELYGGGSHGGTAAVgnpnlkpeKS 435

                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 540 KQDEVGVKIDYGTIGG-SLALFEIKKPNAISDTAGN--------YGLDGEQRNRGVEMNVFGEPMLGLRLNASTVWLDAK 610
Cdd:cd01347  436 KQYELGLKYDPGDGLTlSAALFRIDIKNEIVSTPTNtglglvtvYVNGGKARIRGVELEASYDLTDGLGLTGSYTYTDTE 515

                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 611 QTKTAeGATDGKDAIGVANFYAVLGAEYDIkPVEGLTATARVNHSGSQYADAA---NTKKLDSYTTLDLGLRYRMRLNad 687
Cdd:cd01347  516 VKRTD-GATTGNRLPGIPKHTANLGLDYEL-PDEGLTAGGGVRYRGKQYADTAngnNTVKVPGYTLVDLSASYQFTKN-- 591

                        650       660       670       680
                 ....*....|....*....|....*....|....*....|....*..
gi 488982061 688 qneMIWRVGVTNVTNEKYWS--GIDDTGTYLFEGDPRTVRVSMSYDF 732
Cdd:cd01347  592 ---LTLRLGVNNLFDKDYYTslSVRGSGLYGYYGPGRTYYLSVSYKF 635
TonB_dep_Rec pfam00593
TonB dependent receptor; This model now only covers the conserved part of the barrel structure.
 252-731 3.42e-33

TonB dependent receptor; This model now only covers the conserved part of the barrel structure.


Pssm-ID: 395474 [Multi-domain]  Cd Length: 475  Bit Score: 133.74  E-value: 3.42e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061  252 SLGLDYRGDRFRSSLDFGYQKKTFHGGTMGVNISGVDFIPALPDNSKNYSQKWGYSDIESEFGMAKAEYDLTDSWTVYSA 331
Cdd:pfam00593   3 QLSLDLLGDDTLLTLGYDYSRYTDGLDLGLTLDGYGNDGGYLGDRPLYYGRDYSDTDRKRLSLGYDYDLGDGLSWLSTLR 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061  332 LGGQHSHEIGTYSAPKLLNKNGDATVGRLDTNRiidaisgmggvrGDFNTGAISHKVNLGYAAQVHTDATAWRMSARNPT 411
Cdd:pfam00593  83 LGLRYSSLDGDYTSNSSGLSGAGDYLSDDRLYG------------LYGLDGDLELSLDLSHDLLLGVELRTAGLDYRRLD 150

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061  412 TNIYDNHDVAMPDNAYFGGNyhdplvtsRSRTQGWLLSDTLGFfNDKVLFTAAARHQKVvvRNYSNATGLEDTSSRYTQS 491
Cdd:pfam00593 151 DDAYDPYDPANPSSSSYSDT--------TTDSYGLYLQDNIKL-TDRLTLTLGLRYDHY--STDGDDGNGGGDNFSRSYS 219

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061  492 RWMPTFGLVYKPWEQLSLYANHTEALQPGSVAPTTAANAGQSTGIA----------HSKQDEVGVKIDYGTIGGSLALFE 561
Cdd:pfam00593 220 AFSPRLGLVYKPTDNLSLYASYSRGFRAPSLGELYGSGSGGGGGAVaggnpdlkpeTSDNYELGLKYDDGRLSLSLALFY 299

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061  562 IKKPNAISDTAGNYGLD---------GEQRNRGVEMNVFGEPMLGLRLNASTVWLDAKQTKTAegATDGKDAIGVANFYA 632
Cdd:pfam00593 300 IDIKNLITSDPDGPGLGgtvytytnvGKARIRGVELELSGRLWGLGLSGGGYTYTDADDDADA--DDTGNPLPNVPRHTA 377

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061  633 VLGAEYDIkPVEGLTATARVNHSGSQ---YADAANTKKLDSYTTLDLGLRYRMRLNADqnemiWRVGVTNVTNEKYWSGI 709
Cdd:pfam00593 378 NLGLTYDF-PLGGWGARLGARYVGSGerrYGDAANTFKTPGYTLVDLSAGYRLNKNLT-----LRLGVNNLFDKYYKRYY 451

                         490       500
                  ....*....|....*....|....
gi 488982061  710 DDTGTYL--FEGDPRTVRVSMSYD 731
Cdd:pfam00593 452 SSGGGNLggYPGPGRTFYLGLSYK 475
PRK14050 PRK14050
TonB-dependent siderophore receptor;
120-729 4.31e-21

TonB-dependent siderophore receptor;


Pssm-ID: 237595 [Multi-domain]  Cd Length: 728  Bit Score: 98.33  E-value: 4.31e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 120 QGYGNFAET--YRIRGFK-------LDGDDMTMGGLAGVVprqvMDTQMLERVEIFKGANSLLNGAASSGvgGMINLEPK 190
Cdd:PRK14050 113 QPFGTDGDTdwFYIRGFDatqtgvfLDGLNLFSYGFGGFQ----IDPFMLERVEVLKGPASVLYGGSNPG--GIVNMVSK 186

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 191 RAEDLPTARVGVDYTSDSQVGGTLDLGRRFGDNNQFGARVNLVHREGEGAIDNDKRRTTLASLGLDYRGDRFRSSLDFGY 270
Cdd:PRK14050 187 RPLDEPLYYTEIGINSYGNAFTGFDVGDKLSDDGTVRYRVTGKVAGGDNYSDYSEDLRGFIMPQITYAPDDATSLTVYGY 266

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 271 QK--KTFHGGTmgvnisgvDFIPALP---------------------DNSKNYSQKWGYsdiesEFgmakaEYDLTDSWT 327
Cdd:PRK14050 267 LSglDQVHVGN--------GFLPYVGtvvdapfgkidrdafygepdiDNGSYAQQMLGY-----EF-----SHEFDNGWT 328

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 328 V-----YSALggqHSHEIG--TYSAPKLLNKNGDATVGRLDTNRI-------IDAISGMGGVRGDFNTGAISHKVNLG-- 391
Cdd:PRK14050 329 FsqnarYGHL---HKHEKGpyTYGYVGGATGLPDPTGPDYMLNRIgfehrskVDSFSIDNRLEGEFDTGALTHNLLFGld 405

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 392 YA----AQVHTDATAWRMSARNPTtniydnHDVAMPDNAYfggnYHDPLVTsrsRTQ-GWLLSDTLGFfNDKVLFTAAAR 466
Cdd:PRK14050 406 YKyyrlDQVQACCGATPISATNPV------YGTTQGANFV----YLDQILT---QQQiGIYAQDQIRF-GDGWLVTLNGR 471

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 467 HQKVvvrnYSNATGLEDTSSRYTQSRWMPTFGLVYKPWEQLSLYANHTEALQP--GSVAPTTAANAGQSTgiahskQDEV 544
Cdd:PRK14050 472 YDYV----DTDSDARIGTSYESNDGALSGRAGLAYEFDNGLTPYVSAATFFNPlvGTLASGPPLKPEEGE------QYEA 541

                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 545 GVKIDYGTIGGSL--ALFEIKKPNaISDTAGNYGLD---GEQRNRGVEMNVFGEPMLGLRLNASTVWLDAKQTKTAEGAT 619
Cdd:PRK14050 542 GIKYEPSFIDGLItaSVFQITKKN-VTVTDPLTFAStqlGEVRSRGFELEGKVNLDDNWKALASFTYTDLEITEDANPSL 620

                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 620 DGKDAIGVANFYAVLGAEYDIK--PVEGLTATARVNHSGSQYADAANTKKLDSYTTLDLGLRYrmrlnaDQNEMIWRVGV 697
Cdd:PRK14050 621 IGNSPYLVPETQASLWLDYAVTdgAFEGVSLGAGVRYQGESWADEANTLKVPAATLFDAAIRY------EKNDWGASLNV 694

                        650       660       670
                 ....*....|....*....|....*....|..
gi 488982061 698 TNVTNEKYWSGIDDTGTYLFeGDPRTVRVSMS 729
Cdd:PRK14050 695 ANLFDKEYVAGCQGLLVCGY-GESRTITLKLS 725
 
Name Accession Description Interval E-value
Fiu COG4774
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism];
78-732 0e+00

Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism];


Pssm-ID: 443806 [Multi-domain]  Cd Length: 639  Bit Score: 540.24  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061  78 LGEQKAMDVPFNVIGYTSKLIQDQQAKTIADVVSNDAGVQAVQGYGNFAETYRIRGFKlDGDDMTMGGLAgVVPRQVMDT 157
Cdd:COG4774    1 KTDTPLLDTPQSVTVVTRELIEDQGATSLADALRNVPGVTFGAGEGGNGDSFSIRGFS-ASGDIYVDGLR-DPGQYRRDT 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 158 QMLERVEIFKGANSLLNGAASsgVGGMINLEPKRAEDLPTARVGVDYTSDSQVGGTLDLGRRFGDNnqFGARVNLVHREG 237
Cdd:COG4774   79 FNLERVEVLKGPASVLYGRGS--PGGVINLVTKRPTDEPFTEVTLTYGSDGQRRATLDVNGPLGDD--LAYRLNGMYRDS 154

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 238 EGAIDNDKRRTTLASLGLDYR-GDRFRSSLDFGYQKK--TFHGGTMGVNISGvdfiPALPDNSKNYSQKWGYSDIESEFG 314
Cdd:COG4774  155 DSYRDGVDNDRWGIAPSLTWRlGDRTRLTLDYEYQDDdrTPDYGVPAVANGR----PVDVDRSTFYGQPDDYSDSETDSA 230

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 315 MAKAEYDLTDSWTVYSALGGQHSHEIGTYSAPKLLNKNGDATVGRLDTNRIIDAISGMGGVRGDFNTGAISHKVNLGY-A 393
Cdd:COG4774  231 TLRLEHDFNDNWTLRNALRYSDYDRDYRNTYPTGGNATGTVTRSAYRRDQDNDTLSNQTDLTGKFDTGGVKHTLLAGVeY 310

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 394 AQVHTDATAWRMSARNPTTNIYDNHdvamPDNAYFGGNYHDPLVTSRSRTQGWLLSDTLGfFNDKVLFTAAARHQKVVVR 473
Cdd:COG4774  311 SREDSDNARYSGGGTAPTVNLYNPV----YGAPVTGPTLGGADNDSRTDTTGLYLQDTIS-LTDRWSLLAGLRYDRFDTD 385

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 474 NYSNATGleDTSSRYTQSRWMPTFGLVYKPWEQLSLYANHTEALQPGSVAPtTAANAGQSTGIAHSKQDEVGVKIDY--G 551
Cdd:COG4774  386 YTDRTTG--ATTSSYDDSAFSPRAGLVYKPTPNLSLYASYSTSFNPGGGAP-SLSNAGQALDPEKSRQYEVGVKWDLldG 462

                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 552 TIGGSLALFEIKKPNAIS---DTAGNYGLDGEQRNRGVEMNVFGEPMLGLRLNASTVWLDAKQTKTAEGATDGKDAIGVA 628
Cdd:COG4774  463 RLSLTAALFRIEKTNVRTtdpANPGVYVQTGEQRSRGVELEATGELTPGWSVLAGYTYLDAEITKSANAANVGNRLPNVP 542

                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 629 NFYAVLGAEYDIkPVEGLTATARVNHSGSQYADAANTKKLDSYTTLDLGLRYRMRLNADqnemiWRVGVTNVTNEKYWSG 708
Cdd:COG4774  543 RHSASLWTTYDL-PLPGLTLGGGVRYVGSRYADAANTVKLPSYTRFDAGASYRLNKNLT-----LRLNVNNLTDKRYYAS 616

                        650       660
                 ....*....|....*....|....
gi 488982061 709 IDDTGtYLFEGDPRTVRVSMSYDF 732
Cdd:COG4774  617 AYGSG-YVTPGAPRTVLLSASYRF 639
FhuE COG4773
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion ...
 11-732 3.72e-142

Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion transport and metabolism];


Pssm-ID: 443805 [Multi-domain]  Cd Length: 692  Bit Score: 432.78  E-value: 3.72e-142
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061  11 LRKTLLALAIGAASQTAMAADAAAAKQPGE--ETLIVEANETSDfksggdlvvpaflDGQIAHGGRLGMLGEQKAMDVPF 88
Cdd:COG4773    1 AAALLAGSGLAAAAAGALAQAAAAAAAEATtlPEVTVTGTAEGT-------------GGYTAKSSSTATKLDTPLRETPQ 67

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061  89 NVIGYTSKLIQDQQAKTIADVVSNDAGVQAVQGYGNFAETYRIRGFKLDG---DDMTMGGLAGVVPrqvmDTQMLERVEI 165
Cdd:COG4773   68 SVSVVTRQLIEDQGATTLDDALRNVPGVTVSSYDGGGRDSFSIRGFSIDNylrDGLPLGGFGGGQP----DTANLERVEV 143

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 166 FKGANSLLNGAASsgVGGMINLEPKRAEDLPTARVGVDYTSDSQVGGTLDLGRRFGDNNQFGARVNLVHREGEGAIDNDK 245
Cdd:COG4773  144 LKGPAGLLYGAGS--PGGLVNLVTKRPTAEPQGEVSLSAGSWDTYRATADVGGPLNEDGTLRYRLNAAYEDGDSFRDGVD 221

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 246 RRTTLASLGLDYR-GDRFRSSLDFGYQKKTFHGGTMGVNISGVDFipALPdNSKNYSQKWGYSDIESEFGMAKAEYDLTD 324
Cdd:COG4773  222 NRRTLIAPSLDWDlTDDTTLTLGAEYQDDDSTGDRGFLPLDGTLL--DLP-RSTNLGEPWDYYDTETTTLFAELEHRFND 298

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 325 SWTVYSALGGQHSHEIG--TYSAPKLLNKNGDATVGRLDTNRIIDAISGMGGVRGDFNTGAISHKVNLGYAAQVHTDATA 402
Cdd:COG4773  299 DWSLRANARYSDSDRDGrsAYAYGAPDAATGTLTRYASARDGDSRSDSLDANLNGKFETGGLEHTLLVGADYSRYDSDSD 378

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 403 wrmSARNPTTNIYDNHDVAMPDNAYFGGNYhdplvTSRSRTQGWLLSDTLGfFNDKVLFTAAARHQKVVVRNYSNATGle 482
Cdd:COG4773  379 ---SATAGTINIYNPVYGNLPEPDFDASDT-----DTTTRQTGLYAQDQIS-LTDRLSLLLGGRYDWYETDSTNRLGG-- 447

                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 483 dTSSRYTQSRWMPTFGLVYKPWEQLSLYANHTEALQPGSvaptTAANAGQSTGIAHSKQDEVGVKIDY--GTIGGSLALF 560
Cdd:COG4773  448 -STTSYDDSAFTPRAGLVYDLTPGLSLYASYSESFEPQS----GADNNGNPLDPETGKQYEAGVKGELfdGRLNATLAVF 522

                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 561 EIKKPN---AISDTAGNYGLDGEQRNRGVEMNVFGEPMLGLRLNASTVWLDAKQTKTAEgATDGKDAIGVANFYAVLGAE 637
Cdd:COG4773  523 DITQKNvatTDPDNPNFYVQVGEVRSRGVELELSGELTPGLNLIAGYTYTDAKITKDAD-ALEGKRLTNVPRHTASLWTT 601

                        650       660       670       680       690       700       710       720
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 638 YDIK--PVEGLTATARVNHSGSQYADAANTKKLDSYTTLDLGLRYRMrlnadQNEMIWRVGVTNVTNEKYWSGIDDTGtY 715
Cdd:COG4773  602 YRFPsgALKGLGLGGGVRYVGERYGDAANTFTLPSYTLVDAGARYDL-----GKNWTLQLNVNNLFDKKYYASSGSRG-Y 675

                        730
                 ....*....|....*..
gi 488982061 716 LFEGDPRTVRVSMSYDF 732
Cdd:COG4773  676 VYYGAPRNVRLSLSYKF 692
TonB-siderophor TIGR01783
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of ...
 85-732 3.50e-116

TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of TonB-dependent outer membrane siderophore receptors. It has no overlap with TonB receptors known to transport other substances, but is likely incomplete due to lack of characterizations. It is likely that genuine siderophore receptors will be identified which score below the noise cutoff to this model at which point the model should be updated. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]


Pssm-ID: 273805 [Multi-domain]  Cd Length: 651  Bit Score: 364.04  E-value: 3.50e-116
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061   85 DVPFNVIGYTSKLIQDQQAKTIADVVSNDAGVQAV-QGYGNFAETYRIRGFKL--DGDDMTMGGLAGVVP--RQVMDTQM 159
Cdd:TIGR01783   1 DIPQSVSVITRQELEDQQAGSLSEALQRVPGVVVGgSGGTTQFGNITIRGFGLevDIDNVYLDGVPLLSRgnLAIVDPAM 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061  160 LERVEIFKGANSLLNGaaSSGVGGMINLEPKRAEDLPTARVGVDYTSDSQVGGTLDLGRRFGDNNQFGARVNLVHREGEG 239
Cdd:TIGR01783  81 VERVEVLRGPASLLYG--GSAPGGVINIVTKRPQDEPKGSVTFGAGTRSGYRTAFDLGGPLGADGTFRGRLNGARQDGDS 158

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061  240 AIDNDKRRTTLASLGLDYR-GDRFRSSLDFGYQKKTFHGGTMGVNISGVDFIPALP-DNSKNYSQKWGYSDIESEFGMAK 317
Cdd:TIGR01783 159 FYDGAGEETRLGATATDWQlDDRTLLRLGAYYQKERDRGGYGGLPASGGTSGRDLSsDRYLGTSSNRNYDDREYLSYGLS 238

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061  318 AEYDLTDSWTVYSALGGQHSHEIGTYS-APKLLNKNGDATVGRLDTNRIIDAISGMGGVRGDFNTGAISHKVNLGYAAQv 396
Cdd:TIGR01783 239 LEYQFNDVWTGKQNLRYSYFDTDSNQVqASGYSSDGGLFGRSLTVVNVKQDRVQIDAGLDGEFETGPIEHDLLLGVSYG- 317

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061  397 hTDATAWRMSARNPTTNIY--DNHDVAMPDNAYFggnYHDPLVTSRSRTQGwLLSDTLGFFNDKVLFTAAARHQKVVVRN 474
Cdd:TIGR01783 318 -QRTTNRFNNTGYPSDNIYslTATSSARTDIGDS---PKDRALSSTTKALN-GVALQRILLADKWTLTLGGRYDSVDVKS 392

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061  475 YSNATGLEDTSSrytQSRWMPTFGLVYKPWEQLSLYANHTEALQPGSVAPTTAANAGQSTGIAHSKQDEVGVKIDYGT-I 553
Cdd:TIGR01783 393 NNGVAGSTGKRD---DSQFTPSLGVAYKPTDDWSLYASYAESFKPGGYYPKGAGNSGDILEPEKGKNYELGVRYDLGDsL 469

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061  554 GGSLALFEIKKPNAI---SDTAGNYGLDGEQRNRGVEMNVFGEPMLGLRLNASTVWLDAKQTKTAEGATDGKDAIGVANF 630
Cdd:TIGR01783 470 LATAALFRITKDNQLvqdPVNGTFSVNAGKTRNRGVELEARGYLTPGLSLSAGYTYTDAEFTEDTNGDTQGNTVPFVPKH 549

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061  631 YAVLGAEYDIKPVE-GLTATARVNHSGSQYADAANTKKLDSYTTLDLGLRYRMRLNADqneMIWRVGVTNVTNEKYW--S 707
Cdd:TIGR01783 550 TASLWASYAPPVGDnGLTLGGGVQYTGKAYVDGGNTGKVPSYTVVDLSVRYDLTKKKN---LTLALNVNNLFDRDYYtsG 626

                         650       660
                  ....*....|....*....|....*
gi 488982061  708 GIDDTGTYLFEGDPRTVRVSMSYDF 732
Cdd:TIGR01783 627 YRWGPSAYIYPGAPRTVGLSVSYDF 651
ligand_gated_channel cd01347
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ...
 89-732 9.91e-97

TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.


Pssm-ID: 238657 [Multi-domain]  Cd Length: 635  Bit Score: 312.46  E-value: 9.91e-97
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061  89 NVIGYTSKLIQDQQAKTIADVVSNDAGVQAVQGYGNFAETYRIRGFKLDGDDMTMGGL-------AGVVPRQVMDTQMLE 161
Cdd:cd01347    1 SVSVITAEDIEKQPATSLADLLRRIPGVSVTRGGGGGGSTISIRGFGPDRTLVLVDGLplassnyGRGVDLNTIPPELIE 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 162 RVEIFKGANSLLNGaaSSGVGGMINLEPKRAEDLPTARVGVDYTSD---SQVGGTLDLGRRFGDNNQFGARVNLVHREGE 238
Cdd:cd01347   81 RVEVLKGPSSALYG--SGAIGGVVNIITKRPTDEFGGSVTAGYGSDnsgSSGGGGFDVSGALADDGAFGARLYGAYRDGD 158

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 239 GAIDND------KRRTTLASLGLDYRG-DRFRSSLDFGYQKKTFHGGTMGVNI-SGVDFIPALPDNSKNYSQKWGYSDIE 310
Cdd:cd01347  159 GTIDGDgqaddsDEERYNVAGKLDWRPdDDTRLTLDAGYQDQDADGPGGTLPAnGTGSSLGGGPSSNTNGDRDWDYRDRY 238

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 311 SEFGMAKAEYDLTD-SWTVYSALGGQHSHEIGTYSAPKLLNKN--GDATVGRLDTNRIIDAISGMGGVRGDFNTGAISHK 387
Cdd:cd01347  239 RKRASLGLEHDLNDtGWTLRANLSYSYTDNDGDPLILNGGNNAagGDLGRSGYSSERDTTQLGFDAGLNAPFGTGPVAHT 318

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 388 VNLGYAAQVHtdatawrmsarnpttniydnhdvampdnayfggnyhdplvTSRSRTQGWLLSDTLgFFNDKVLFTAAARH 467
Cdd:cd01347  319 LTLGVEYRRE----------------------------------------ELDEKQTALYAQDTI-ELTDDLTLTLGLRY 357

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 468 QKVVVRNYSNATGleDTSSRYTQSRWMPTFGLVYKPWEQLSLYANHTEALQPGSVAPTTAANAGQSTGIA--------HS 539
Cdd:cd01347  358 DHYDQDSKDTIAG--GTTAKKSYSHWSPSLGLVYKLTDGLSLYASYSQGFRAPSLGELYGGGSHGGTAAVgnpnlkpeKS 435

                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 540 KQDEVGVKIDYGTIGG-SLALFEIKKPNAISDTAGN--------YGLDGEQRNRGVEMNVFGEPMLGLRLNASTVWLDAK 610
Cdd:cd01347  436 KQYELGLKYDPGDGLTlSAALFRIDIKNEIVSTPTNtglglvtvYVNGGKARIRGVELEASYDLTDGLGLTGSYTYTDTE 515

                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 611 QTKTAeGATDGKDAIGVANFYAVLGAEYDIkPVEGLTATARVNHSGSQYADAA---NTKKLDSYTTLDLGLRYRMRLNad 687
Cdd:cd01347  516 VKRTD-GATTGNRLPGIPKHTANLGLDYEL-PDEGLTAGGGVRYRGKQYADTAngnNTVKVPGYTLVDLSASYQFTKN-- 591

                        650       660       670       680
                 ....*....|....*....|....*....|....*....|....*..
gi 488982061 688 qneMIWRVGVTNVTNEKYWS--GIDDTGTYLFEGDPRTVRVSMSYDF 732
Cdd:cd01347  592 ---LTLRLGVNNLFDKDYYTslSVRGSGLYGYYGPGRTYYLSVSYKF 635
CirA COG1629
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism];
80-714 7.83e-67

Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism];


Pssm-ID: 441236 [Multi-domain]  Cd Length: 644  Bit Score: 232.80  E-value: 7.83e-67
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061  80 EQKAMDVPFNVIGYTSKLIQDQQAKTIADVVSNDAGVQaVQGYGNFAETYRIRGFKLDG-------DDMTMGGLA-GVVP 151
Cdd:COG1629   12 DESLQDVPGSVSVISREQLEDQPATDLGDLLRRVPGVS-VTSAGGGAGQISIRGFGGGGnrvlvlvDGVPLNDPSgGDGG 90

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 152 RQVMDTQMLERVEIFKGANSLLNGAASSGvgGMINLEPKRAEDLPTARVGVDYTSDSQVGGTLDLGrrfGDNNQFGARVN 231
Cdd:COG1629   91 LSYIDPEDIERVEVLRGPSSALYGSGALG--GVINIVTKKPKDGKGGEVSASYGSYGTYRASLSLS---GGNGKLAYRLS 165

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 232 LVHREGEGAIDNDKRRTTLASLGLDYR-GDRFRSSLDFGYQKKTFHGGTmgvNISGVDFIPALPDNSKNYSQKWGYSDIE 310
Cdd:COG1629  166 ASYRDSDGYRDNSDSDRYNLRAKLGYQlGDDTRLTLSASYSDSDQDSPG---YLTLAALRPRGAMDDGTNPYSNDTDDNT 242

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 311 SEFGMAKAEYD-LTDSWTVYSALGGQHSHEIGTYSAPKLLNKNGDATVGRLDTNRIidaiSGMGGVRGDFNTGAiSHKVN 389
Cdd:COG1629  243 RDRYSLSLEYEhLGDGLKLSASAYYRYDDTDLDSDFTPTPADGGTLEQTDFDNRTY----GLELRLTYDLGFGG-KHTLL 317

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 390 LGYAAQVHtdatawRMSARNPTTNIYDNHDVAMPDNAYFGGnyhdplvtsRSRTQGWLLSDTLGFfNDKVLFTAAARHQK 469
Cdd:COG1629  318 VGLDYQRQ------DLDGSGYPLDLGSGSLPTLTSGADDDG---------TTTSLALYAQDTYKL-TDKLTLTAGLRYDY 381

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 470 VVVRNYSNATGLEDTSSRYTQSRWMPTFGLVYKPWEQLSLYANHTEALQPGSVAPTTAANAGQSTGIAH------SKQDE 543
Cdd:COG1629  382 VSYDVDDTVTGTDSASGSRSYSAFSPSLGLTYQLSPNLSLYASYSRGFRAPTFGELYANGTDPYSVGNPdlkpetSTNYE 461

                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 544 VGVKIDY--GTIGGSLALFEIKKPNAISDTAGNYGLD--------GEQRNRGVEMNVFGEPMLGLRLNASTVWLDAKQTK 613
Cdd:COG1629  462 LGLRYRLldGRLSLSLALFYSDVDNEILSVPLPNDSGfstyytnaGKARSYGVELELSYQLTPGLSLNASYSYTDAKFDD 541

                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 614 TAEG--ATDGKDAIGVANFYAVLGAEYDIKPveGLTATARVNHSGSQYADAANTKKLD-SYTTLDLGLRYRMRLNADqne 690
Cdd:COG1629  542 DTDGsaDLDGNRLPGVPPLTANLGLTYEFPG--GWSLGLGVRYVGDRYLDDANTQGAPgGYTLVDLGAGYRFGDNLT--- 616

                        650       660
                 ....*....|....*....|....
gi 488982061 691 miWRVGVTNVTNEKYWSGIDDTGT 714
Cdd:COG1629  617 --LSLGVDNLFDKKYATSLSVRAS 638
FecA COG4772
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism];
94-732 1.06e-38

Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism];


Pssm-ID: 443804 [Multi-domain]  Cd Length: 681  Bit Score: 153.16  E-value: 1.06e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061  94 TSKLIQDQQAKTIADVVSNDAGVQAV--QGYG---NFAetyrIRGFKL----------DGDDMTM----GGLAGVVPrqv 154
Cdd:COG4772   49 DREELENQAATSLREVLRRVPGVNVQeeDGFGlrpNIG----IRGLGPrrsrgitlleDGIPIAPapygDPAAYYFP--- 121

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 155 mDTQMLERVEIFKGANSLLNGAASsgVGGMINLEPKRAEDLPTARVGVDYTSDSQVGGTLDLGRRFGDnnqFGARVNLVH 234
Cdd:COG4772  122 -DLERMERIEVLRGAAALRYGPQT--VGGAINFVTRTIPTAFGGELRVTGGSFGYRRTHASVGGTVGN---FGYLVEYSR 195

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 235 REGEGAIDNDKRRTTLASLGLDYR-GDRFRSSLDFGYQKKTFH--GGtmgvnISGVDFipaLPDNSKNYSQKWGYsDIES 311
Cdd:COG4772  196 KRGDGFRDNSGFDINDFNAKLGYRlSDRQELTLKFQYYDEDANtpGG-----LTDAQF---DADPRQSYRPADQF-DTRR 266

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 312 EFGMAKAEYDLTDSWTVysalggqhshEIGTYSapklLNKNGDATVGRLDTNRIIDAISGMGGVRG------------DF 379
Cdd:COG4772  267 TQLSLRYEHQLSDNTTL----------TTTAYY----NDFSRNWYIRQNTADPNTPGLGLRGNPRGyrsygieprlthRF 332

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 380 NTGAISHKVNLGYAAqvhtdatawrmsarnpttnIYDNHDVAMPDNAYFGGNyhDPLVTSRSRTQGwllSDTLGFF---- 455
Cdd:COG4772  333 ELGGVPHTLEVGLRY-------------------HREEEDRKQYVNTYGQGR--SGAGLRRDRRFS---ADALAAYaqnr 388

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 456 ---NDKVLFTAAARHQKVV--VRNYSNATGLEDTSSRYTQSRWMPTFGLVYKPWEQLSLYAN-HT--EALQPGSVAPTTA 527
Cdd:COG4772  389 felTGRLTLTPGLRYEHIRrdRTDRYSTRTGGDDSGSNSYSEFLPGLGLLYQLTDNLQLYANvSRgfEPPTFGDLAYGNG 468

                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 528 ANAGQSTgiAHSKQDEVGVKIDYG-TIGGSLALFEIKKPNAISDTAGNYGLDGEQRN------RGVEMNVFGEPM----L 596
Cdd:COG4772  469 GNPDLKP--EKSWNYELGTRGRIGnGLSAEVALFYIDYDNELGSCSAAGGDRSTFTNagetrhQGLELALDYDLLkgggL 546

                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 597 GLRLNASTVWLDAKQTKTAEGATDGKDAIGVANFYAVLGAEYDikpVEGLTATARVNHSGSQYADAANTK------KLDS 670
Cdd:COG4772  547 GLPLFAAYTYTDAEFTSDFGPVFAGNRLPYVPRHQLTAGLGYE---HGGWTANLNGRYVSEQFTDAANTVadgsfgKIPS 623

                        650       660       670       680       690       700
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 488982061 671 YTTLDLGLRYRMRLNADqnemiWRVGVTNVTNEKYWSGIDDTGTYLFE-GDPRTVRVSMSYDF 732
Cdd:COG4772  624 YTVLDLSASYDFGKNLS-----LFAGVNNLFDKRYIASRAPNYAAGIRpGPPRTVYAGLRLKF 681
TonB_dep_Rec pfam00593
TonB dependent receptor; This model now only covers the conserved part of the barrel structure.
 252-731 3.42e-33

TonB dependent receptor; This model now only covers the conserved part of the barrel structure.


Pssm-ID: 395474 [Multi-domain]  Cd Length: 475  Bit Score: 133.74  E-value: 3.42e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061  252 SLGLDYRGDRFRSSLDFGYQKKTFHGGTMGVNISGVDFIPALPDNSKNYSQKWGYSDIESEFGMAKAEYDLTDSWTVYSA 331
Cdd:pfam00593   3 QLSLDLLGDDTLLTLGYDYSRYTDGLDLGLTLDGYGNDGGYLGDRPLYYGRDYSDTDRKRLSLGYDYDLGDGLSWLSTLR 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061  332 LGGQHSHEIGTYSAPKLLNKNGDATVGRLDTNRiidaisgmggvrGDFNTGAISHKVNLGYAAQVHTDATAWRMSARNPT 411
Cdd:pfam00593  83 LGLRYSSLDGDYTSNSSGLSGAGDYLSDDRLYG------------LYGLDGDLELSLDLSHDLLLGVELRTAGLDYRRLD 150

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061  412 TNIYDNHDVAMPDNAYFGGNyhdplvtsRSRTQGWLLSDTLGFfNDKVLFTAAARHQKVvvRNYSNATGLEDTSSRYTQS 491
Cdd:pfam00593 151 DDAYDPYDPANPSSSSYSDT--------TTDSYGLYLQDNIKL-TDRLTLTLGLRYDHY--STDGDDGNGGGDNFSRSYS 219

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061  492 RWMPTFGLVYKPWEQLSLYANHTEALQPGSVAPTTAANAGQSTGIA----------HSKQDEVGVKIDYGTIGGSLALFE 561
Cdd:pfam00593 220 AFSPRLGLVYKPTDNLSLYASYSRGFRAPSLGELYGSGSGGGGGAVaggnpdlkpeTSDNYELGLKYDDGRLSLSLALFY 299

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061  562 IKKPNAISDTAGNYGLD---------GEQRNRGVEMNVFGEPMLGLRLNASTVWLDAKQTKTAegATDGKDAIGVANFYA 632
Cdd:pfam00593 300 IDIKNLITSDPDGPGLGgtvytytnvGKARIRGVELELSGRLWGLGLSGGGYTYTDADDDADA--DDTGNPLPNVPRHTA 377

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061  633 VLGAEYDIkPVEGLTATARVNHSGSQ---YADAANTKKLDSYTTLDLGLRYRMRLNADqnemiWRVGVTNVTNEKYWSGI 709
Cdd:pfam00593 378 NLGLTYDF-PLGGWGARLGARYVGSGerrYGDAANTFKTPGYTLVDLSAGYRLNKNLT-----LRLGVNNLFDKYYKRYY 451

                         490       500
                  ....*....|....*....|....
gi 488982061  710 DDTGTYL--FEGDPRTVRVSMSYD 731
Cdd:pfam00593 452 SSGGGNLggYPGPGRTFYLGLSYK 475
FepA COG4771
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and ...
 80-681 1.18e-31

Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and metabolism];


Pssm-ID: 443803 [Multi-domain]  Cd Length: 612  Bit Score: 131.13  E-value: 1.18e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061  80 EQKAMDVPFNVIGYTSKLIQDQQAKTIADVVSNDAGVQAVQGYGN-FAETYRIRGFK-------LDGDDMTMGGLAGVVP 151
Cdd:COG4771   38 EQSLSDAPASVSVITAEEIEKLGATDLADALRLLPGVSVTRSGGRgGSSGISIRGLGgdrvlvlIDGVPVNNPALGGGGD 117

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 152 RQVMDTQMLERVEIFKGANSLLNGaaSSGVGGMINLEPKRAEDLPTARVGVDYTSDSQVGGTLDLgRRFGDNNQFGARVN 231
Cdd:COG4771  118 LSYIPPDDIERIEVIRGPASALYG--SDAIGGVINIITKKPTDELEGSVSLGYGSNGNGTYSGSL-SLGGPGDKLSFLLS 194

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 232 LVHREGEGAID--------NDKRRTTLASLGLDYR-GDRFRSSLDFGYQKKTFHGGTMGVNISGVDFIPALPDNSKNYSQ 302
Cdd:COG4771  195 GSYRDRDGYLDyrnggfvgNSGYERYNLNAKLGYRlSDNHRLSLSGGYSRQDRDGGPPTLGDTEISSDNAGDRDTTTDRG 274

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 303 KWGysdiesefgmAKAEYDLTDSWTVYsaLGGQHSHEIGTYSAPKLLNKNGDATvgRLDTNriidaisgmgGVRGDFNTG 382
Cdd:COG4771  275 NYS----------LRYNGDLGDNLDLS--LYYSRTDRDSTNGSLGGSTGSFSDS--DDTTY----------GLELDLTYP 330

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 383 -AISHKVNLGYAAQVHTDATAWRMSARNPTTNIYdnhdvampdNAYFGGNYHdplvtsrsrtqgwllsdtlgfFNDKVLF 461
Cdd:COG4771  331 lGGNHTLTLGAEYRYDDLDSSSFLGGADASRDTY---------GLFAQDEWK---------------------LTDKLTL 380

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 462 TAAARHQKVvvrnysnatgleDTSSRYTQSRWMPTFGLVYKPWEQLSLYANHTEALQPGSVAPTTAANAGQSTGIA---- 537
Cdd:COG4771  381 TAGLRYDYY------------STFGASNYTAFSPRLGLRYDLSDNLTLRASYGRGFRAPSLAELYGSGTGTPGRYVlgnp 448

                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 538 -----HSKQDEVGV--KIDYGTIGGSLALFEIKKPNAISDTAGNYGLD--------GEQRNRGVEMNVFGEPMLGLRLNA 602
Cdd:COG4771  449 dlkpeTSDNYELGLeyRLGNGGLSLSLTGFYTDIKDLIVLVPVGPGPGdvlqyenvGKARTYGLELELKYRLGKGLTLTA 528

                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 603 STVWLDAKQTKTaegaTDGKDAIGVANFYAVLGAEYDIKPVEGLTATAR-VNHSGSQYADAANTKKLDSYTTLDLGLRYR 681
Cdd:COG4771  529 SYTYLDSKIDDG----DTGEPLPNVPPHKANLGLDYRLPKWWLLLLLTRyYGGRYVTPPSGRLEGYTPGYTLLDLRASYK 604
TonB-hemin TIGR01785
TonB-dependent heme/hemoglobin receptor family protein; This model represents the ...
 79-732 5.25e-25

TonB-dependent heme/hemoglobin receptor family protein; This model represents the TonB-dependent outer membrane heme/hemoglobin receptor/transporter found in bacteria which live in contact with animals (which contain hemoglobin or other heme-bearing globins) or legumes (which contain leghemoglobin). Some species having hits to this model such as Nostoc, Caulobacter and Chlorobium do not have an obvious source of hemoglobin-like proteins in their biological niche and so the possibility exists that they act on some other substance. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]


Pssm-ID: 273807 [Multi-domain]  Cd Length: 665  Bit Score: 110.56  E-value: 5.25e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061   79 GEQKAMDVPFNVIGYTSKLIQDQQAKTIADVVSNDAGVqAVQGYGNF-AETYRIRGFKLDG-----DDMTMGGLAGV--V 150
Cdd:TIGR01785  11 TRQVLSEAPASVSVISGEQIESKQANNLADALNTVPGV-DVTGGGRPpGQSINIRGLQDNRvlvvvDGARQNYQRGGahN 89

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061  151 PRQVMDTQMLERVEIFKGANSLLNGaaSSGVGGMINLEPKRAEDL--PTARVGVDY-----TSDSQVGGTLDLGRRFGDN 223
Cdd:TIGR01785  90 GSLFVDPELLKRIEIVKGPSSSLYG--SGALGGVVAFRTKDAADLlrPGQLFGGLAklsygSNNNSFGGSVAVAGRLDDN 167

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061  224 ----NQFGARV--NLVHREGEGAIDND-KRRTTLASLGldYRGDrFRSSLDFGYQKKTFHGGTMGVNISGVDFIPALpdn 296
Cdd:TIGR01785 168 ldalVAATYRDggNYRNGNKEEATNSAyVQKNLLAKLG--WQLD-DAQRLEFSYFTTEGSLDEAQNSGPGTEYVLGS--- 241

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061  297 sknySQKWGYSDIESEFGMAKAEYDLTDS--WTVYSALGGQHSHEIGTYSAPKLLNKNG--DATVGRLDTNRIidaisgm 372
Cdd:TIGR01785 242 ----SSTLLASSTRDRSATLTYNWTPEDNpwLDATASLYYNRTENDNDRSARGVGREEGyqYTTYGATLQNTS------- 310

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061  373 ggvrgDFNTGAISHkvnLGYAAQVHTDatawrmsarnptTNIYDNHDVAMPDNAYFggnyhdPLVTSRSRTQGWLLSDTL 452
Cdd:TIGR01785 311 -----RFDVASWST---LTYGVDWMKD------------KRRTESFDPNSVTTIVP------NPPSAKEYFFGLFLQDNI 364

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061  453 GFFNDKVLFTAAARHQKVvvRNYSNATGLEDTSSRyTQSRWMPTFGLVYKPWEQLSLYANHTEALQPGSV--APTTAANA 530
Cdd:TIGR01785 365 PLLDDRLTLSAGLRYDHY--KLSPKTTADTEAVDR-SYSRWSPSLGLSYKPVDWLTLYASYSQGFRAPSIdeLYGTGDHP 441

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061  531 GQSTGIAH----------SKQDEVGVKI-------DYGTIGGSLALFEIKKPNAISDTAGNY-GLDGEQRNRGVEMNVFG 592
Cdd:TIGR01785 442 GTPGGYTFapnpnlkpetSKTWELGANLsfdnlllDNDQLQFKVAYFYNDVKDFIDLTIGVTdNVTAGMNNITQYVNIDG 521

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061  593 EPMLGLRLNASTVWLDAkQTKTAEGATDGKDA---IGVANF---YAVLGAEYDIkPVEGLTATARVNHSGSQY------- 659
Cdd:TIGR01785 522 ARIRGIEASASYDAGLW-ATGLSYGYTIGKDQntnQWLSNIpplKLVVTVGYRF-PDRRLDLGAKAAYYERQSesptted 599

                         650       660       670       680       690       700       710
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 488982061  660 ADAANTKKLDSYTTLDLGLRYRMrlnADQNEMIWRVGVTNVTNEKYWSGIDDTGTylfeGDPRTVRVSMSYDF 732
Cdd:TIGR01785 600 VAANGLLTTPGYTVVDLYATYQP---NAVKGLTVRFGVNNLTDRKYTPAQSVPGA----GPGRNFKGSVKYQF 665
PRK14050 PRK14050
TonB-dependent siderophore receptor;
120-729 4.31e-21

TonB-dependent siderophore receptor;


Pssm-ID: 237595 [Multi-domain]  Cd Length: 728  Bit Score: 98.33  E-value: 4.31e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 120 QGYGNFAET--YRIRGFK-------LDGDDMTMGGLAGVVprqvMDTQMLERVEIFKGANSLLNGAASSGvgGMINLEPK 190
Cdd:PRK14050 113 QPFGTDGDTdwFYIRGFDatqtgvfLDGLNLFSYGFGGFQ----IDPFMLERVEVLKGPASVLYGGSNPG--GIVNMVSK 186

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 191 RAEDLPTARVGVDYTSDSQVGGTLDLGRRFGDNNQFGARVNLVHREGEGAIDNDKRRTTLASLGLDYRGDRFRSSLDFGY 270
Cdd:PRK14050 187 RPLDEPLYYTEIGINSYGNAFTGFDVGDKLSDDGTVRYRVTGKVAGGDNYSDYSEDLRGFIMPQITYAPDDATSLTVYGY 266

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 271 QK--KTFHGGTmgvnisgvDFIPALP---------------------DNSKNYSQKWGYsdiesEFgmakaEYDLTDSWT 327
Cdd:PRK14050 267 LSglDQVHVGN--------GFLPYVGtvvdapfgkidrdafygepdiDNGSYAQQMLGY-----EF-----SHEFDNGWT 328

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 328 V-----YSALggqHSHEIG--TYSAPKLLNKNGDATVGRLDTNRI-------IDAISGMGGVRGDFNTGAISHKVNLG-- 391
Cdd:PRK14050 329 FsqnarYGHL---HKHEKGpyTYGYVGGATGLPDPTGPDYMLNRIgfehrskVDSFSIDNRLEGEFDTGALTHNLLFGld 405

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 392 YA----AQVHTDATAWRMSARNPTtniydnHDVAMPDNAYfggnYHDPLVTsrsRTQ-GWLLSDTLGFfNDKVLFTAAAR 466
Cdd:PRK14050 406 YKyyrlDQVQACCGATPISATNPV------YGTTQGANFV----YLDQILT---QQQiGIYAQDQIRF-GDGWLVTLNGR 471

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 467 HQKVvvrnYSNATGLEDTSSRYTQSRWMPTFGLVYKPWEQLSLYANHTEALQP--GSVAPTTAANAGQSTgiahskQDEV 544
Cdd:PRK14050 472 YDYV----DTDSDARIGTSYESNDGALSGRAGLAYEFDNGLTPYVSAATFFNPlvGTLASGPPLKPEEGE------QYEA 541

                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 545 GVKIDYGTIGGSL--ALFEIKKPNaISDTAGNYGLD---GEQRNRGVEMNVFGEPMLGLRLNASTVWLDAKQTKTAEGAT 619
Cdd:PRK14050 542 GIKYEPSFIDGLItaSVFQITKKN-VTVTDPLTFAStqlGEVRSRGFELEGKVNLDDNWKALASFTYTDLEITEDANPSL 620

                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 620 DGKDAIGVANFYAVLGAEYDIK--PVEGLTATARVNHSGSQYADAANTKKLDSYTTLDLGLRYrmrlnaDQNEMIWRVGV 697
Cdd:PRK14050 621 IGNSPYLVPETQASLWLDYAVTdgAFEGVSLGAGVRYQGESWADEANTLKVPAATLFDAAIRY------EKNDWGASLNV 694

                        650       660       670
                 ....*....|....*....|....*....|..
gi 488982061 698 TNVTNEKYWSGIDDTGTYLFeGDPRTVRVSMS 729
Cdd:PRK14050 695 ANLFDKEYVAGCQGLLVCGY-GESRTITLKLS 725
PRK10044 PRK10044
ferrichrome outer membrane transporter; Provisional
 86-680 5.65e-20

ferrichrome outer membrane transporter; Provisional


Pssm-ID: 236643 [Multi-domain]  Cd Length: 727  Bit Score: 94.83  E-value: 5.65e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061  86 VPFNVIGYTSKLIQDQQAKTIADVVSNDAGVQ-AVQGYGNFAETYRIRGFKLDG--DDMTMGGL---AGVVPRQVMDTQM 159
Cdd:PRK10044  79 TPQSISVVTAEEMALHQPKSVKEALSYTPGVSvGTRGASNTYDHLIIRGFAASGqsQNNYLDGLklqGNFYNDAVIDPYM 158

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 160 LERVEIFKGANSLLNGaaSSGVGGMINLEPKRAEDLPTARVGVDYTSDSQVGGTLDLGRRFGDNNQFGARVNLVHREGEG 239
Cdd:PRK10044 159 LERAELMRGPVSVLYG--KSNPGGLLNMVSKRPTTEPLKEVQFKMGTDNLFQTGFDFSDALDDDGVYSYRLTGLARSANA 236

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 240 AIDNDK-RRTTLASlGLDYRGDR---------FRSSLDFGY-----QKKTFHGGTMGVNISgVDFIPALPDNSKNYSQKW 304
Cdd:PRK10044 237 QQKGSEeQRYAIAP-SFTWRPDDktnftflsyFQNEPETGYygwlpKEGTVEPLPNGKRLP-TDFNEGAKNNTYSRNEKM 314

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 305 -GYSdiesefgmakAEYDLTDSWTVYSAL--GGQHSHEIGTYSAPKLLNKNGDATVGRLDTNRIIDAISGMGGVRGDFNT 381
Cdd:PRK10044 315 vGYS----------FDHEFNDTFTVRQNLryAENKTSQRSVYGYGVCSDKGHYLNRGYVVDDEKLQNFSVDTQLQSKFAT 384

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 382 GAISHKVNLGYAAQ-VHTDATAWRMSARN-PTTNIYDNHDVAMPDNAYFGGnYHdplVTSRSRTQGWLLSDTLGFfnDKV 459
Cdd:PRK10044 385 GDVDHTLLTGVDFMrMRNDINAWFGYADSvPLLNLYGPVNTDFDFNANSGP-YQ---ILNKQKQTGLYVQDQAEW--DKW 458

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 460 LFTAAARH----QKVVVRNYSNATGLEDTssrytQSRWMPtfGLVYKPWEQLSLYANHTEALQPGSVAPTTaanaGQSTG 535
Cdd:PRK10044 459 LVTLGGRYdwadQSSLNRVNGTTDKRDDK-----QFTWRG--GVNYLFDNGITPYFSYSESFEPSSGTGKD----GNIFA 527

                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 536 IAHSKQDEVGVKI--DYGTIGGSLALFEIKKP-NAISDTAGNYG--LDGEQRNRGVEMNVFGEPMLGLRLNASTVWLDAK 610
Cdd:PRK10044 528 PSKGKQYEAGVKYvpKDRPIVVTGAVYQLTKTnNLTADPENSFFsvQGGEIRARGVELEAKAALSANVNVTGSYTYTDAE 607

                        570       580       590       600       610       620       630
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 488982061 611 QTKtaEGATDGKDAIGVANFYAVLGAEYDIK--PVEGLTATARVNHSGSQYADAANTKKLDSYTTLDLGLRY 680
Cdd:PRK10044 608 YTT--DTTYKGNTPAQVPKHMASLWADYTFFdgPLSGLTLGTGGRYTGSSYGDPANSFKVGSYTVVDALVKY 677
PRK09840 PRK09840
catecholate siderophore receptor Fiu; Provisional
 8-732 1.47e-19

catecholate siderophore receptor Fiu; Provisional


Pssm-ID: 182105 [Multi-domain]  Cd Length: 761  Bit Score: 93.72  E-value: 1.47e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061   8 SFPLRKTLLALAIGAASQTAMAADAAAAkqPGEETLIVEANETSDFKSGgDLVVPAFldgqiahggrlgmlgEQKAMDVP 87
Cdd:PRK09840  11 QFHSLAFFAGLCIGITPVAQALAAEGQT--NADDTLVVEASTPSLYAPD-QSADPKF---------------SQPLADTT 72

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061  88 --FNVIGYTskLIQDQQAKTIADVVSNDAGVQAV----QGYGNFAETYRIRGFK------LDG-DDMtmgglaGVVPRQV 154
Cdd:PRK09840  73 qtITVISEQ--VIKDQGATNLTEALRNVPGVGTFfageNGNTTTGDAIYMRGFDtsnsiyVDGiRDI------GSISRDT 144

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 155 MDTqmlERVEIFKGANSLLNGAASSGvgGMINLEPKRAEDLPTARVGVDYTSDSQVGGTLDLGRRFGDNNQFgaRVNLV- 233
Cdd:PRK09840 145 FNT---EQVEVIKGPSGTDYGRSAPT--GSINMISKQPRNDSGIDASASIGSAWFRRGTLDVNQVIGDTTAV--RLNVMg 217

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 234 ---HREGEGAIDNDkrRTTLA---SLGLdyrGDRFRSSLDFGY--QKKTFHGG--TMGV-----NISGVDFIPALPD-NS 297
Cdd:PRK09840 218 ektHDAGRDKVKNE--RYGVApsvAFGL---GTANRLYLNYLHvtQNNTPDGGipTIGLpgysaPSAGRAALNHAGKvDT 292

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 298 KN-YSQKWGYSDIESEFGMAKAEYDLTDSWTVYSALG-GQHSHEigtY-------SAPKLLNKNGDA----TVGRL---- 360
Cdd:PRK09840 293 HNfYGTDSDYDDSTTDTATMRFEHDINDNTTLRNTTRwSRVKQD---YlltaimgGASNITTPTPSDvntwTWSRTantk 369

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 361 -DTNRIIdaiSGMGGVRGDFNTGAISHKVNLGYAAQVHTDATAWRMSARNPTTNIYD-NHDVAMPDNAYFGGNyhdplVT 438
Cdd:PRK09840 370 dVSNKIL---TNQTNLTSTFYTGSIGHDVSTGVEFTRETQTNYGVNPVTLPAVNLYHpDSSIHPGGLTRNGAN-----AN 441

                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 439 SRSRTQGWLLSDTLGFfNDKVLFTAAARhqkvvVRNYS---NATGLEDTSSR------YTQSRWMPT------------- 496
Cdd:PRK09840 442 GQTDTFAIYAFDTLQL-TRDWELNGGIR-----LDNYHteyDSATACGGSGRgaitcpAGVAKGSPVttvdtaksgnlvn 515

                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 497 --FGLVYKPWEQLSLYANHTEALQP--GS---VAPTTAANAGQSTGIA--HSKQDEVGVKIDY--GTIGGSLALFEIKKP 565
Cdd:PRK09840 516 wkAGALYKLTENGNVYINYAVSQQPpgGSnfaLAQSGSGNSANRTDFKpqKANTSEIGTKWQVldKRLLLTAALFRTDIE 595

                        650       660       670       680       690       700       710       720
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 566 NAI-SDTAGNYGLDGEQRNRGVEMNVFGEPMLGLRLNASTVWLDAKQTKTAEGATDGKDAIGVANFYA-VLGAEYDIKPv 643
Cdd:PRK09840 596 NEVeQNDDGTYSQYGKKRVEGYELSVAGNITPAWQVIAGYTQQKATVKNGKDVAQDGSSSLPYTPEHAfTLWSQYQATD- 674

                        730       740       750       760       770       780       790       800
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 644 eGLTATARVNHSGSQYAD---AANTKK-LDSYTTLDLGLRYRMRLNADqnemiWRVGVTNVTNEKYWSGIDDTGTYLFEG 719
Cdd:PRK09840 675 -DLSVGGGARYIGSMHRGsdgAVGTPAfTEGYWVADAKLGYRVNRNLD-----LQLNVYNLFDTDYVASINKSGYRYHPG 748

                        810
                 ....*....|...
gi 488982061 720 DPRTVRVSMSYDF 732
Cdd:PRK09840 749 EPRTFLLTANMHF 761
BtuB COG4206
Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism];
80-273 2.92e-17

Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism];


Pssm-ID: 443355 [Multi-domain]  Cd Length: 276  Bit Score: 82.61  E-value: 2.92e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061  80 EQKAMDVPFNVIGYTSKLIQDQQAKTIADVVSNDAGVQaVQGYGNF--AETYRIRGFK-------LDGDDMTMGGLAGVV 150
Cdd:COG4206    9 EQSKSDLTGSVTVIDAEELERSGATSLADALRRVPGVQ-VSSSGGPgsAASISIRGLGsnqtlvlIDGVPLNDPSLGGVD 87

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 151 PRQVmDTQMLERVEIFKGANSLLNGaaSSGVGGMINLEPKRAEDLPTARVGVDYTSDSQVGGTLDLGrrfGDNNQFGARV 230
Cdd:COG4206   88 LSLI-PPDDIERIEVLKGAASALYG--SDAIGGVINITTKKGKKGFKGSVSASYGSFGTRRLSASLS---GGAGKFSYSL 161

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|.
gi 488982061 231 NLVHREGEG-------AIDNDKRRTTLASLGLDYR-GDRFRSSLDFGYQKK 273
Cdd:COG4206  162 SASYRRSDGyryndpdLRNNDGYENTSLNARLGYKlGDNGSLSLSGGYSDS 212
Plug pfam07715
TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently ...
 82-180 5.16e-17

TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently folding subunit of the TonB-dependent receptors. It acts as the channel gate, blocking the pore until the channel is bound by ligand. At this point it under goes conformational changes opens the channel.


Pssm-ID: 462243 [Multi-domain]  Cd Length: 107  Bit Score: 76.92  E-value: 5.16e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061   82 KAMDVPFNVIGYTSKLIQDQQAKTIADVVSNDAGVQAVQGYGNFAETYRIRGFKLDGDDMT------MGGLAGVVPRQVM 155
Cdd:pfam07715   1 DLRDTPGSVSVVTAEDIEDQGATNLADALRGVPGVSVSSGGGGGGSSISIRGFGSNRVLVLvdgvplNSGGGGSVDLNSI 80

                          90       100
                  ....*....|....*....|....*
gi 488982061  156 DTQMLERVEIFKGANSLLNGAASSG 180
Cdd:pfam07715  81 DPEDIERVEVLKGPASALYGSGAIG 105
PRK10003 PRK10003
ferric-rhodotorulic acid outer membrane transporter; Provisional
 14-732 1.97e-14

ferric-rhodotorulic acid outer membrane transporter; Provisional


Pssm-ID: 236640 [Multi-domain]  Cd Length: 729  Bit Score: 77.21  E-value: 1.97e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061  14 TLLALAIGAASQTAMAADAAAAkqpgEETLIVEANETSDFKSG-GDLVVPAFLDGQiahggrlGMLGEQKamDVPFNVIG 92
Cdd:PRK10003  18 SLLAGCIALALLPSAAFAAPAT----EDTVIVEGSATAPVDDGeQDYSVKTTSAGT-------KMQMTQR--DIPQSVSI 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061  93 YTSKLIQDQQAKTIADVVSNDAGVQAVQGYGNFAeTYRIRGFKLDG---DDM--------TMGGLAGvvprqvmDTQMLE 161
Cdd:PRK10003  85 VSQQRMEDQQLQTLGEVMENTLGISKSQADSDRA-LYYSRGFQIDNymvDGIptyfesrwNLGDALS-------DTALFE 156

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 162 RVEIFKGANSLLNGAASSGVGgmINLEPKRAedlpTAR-----VGVDY----------------TSDSQVGGTLDLGrrF 220
Cdd:PRK10003 157 RVEVVRGATGLMTGTGNPSAA--INMVRKHA----TSRefkgdVSAEYgswnkqryvadlqsplTEDGKVRARIVAG--Y 228

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 221 GDNNQFGARVNLVHREGEGAIDNDKRRTTLASLGLDYRgdrfRSSLDfgyqKKTFhGGTMGVNISGVdfiPALPDNSKNY 300
Cdd:PRK10003 229 QNNDSWLDRYNSEKTFFSGIVDADLGDLTTLSAGYEYQ----RIDVN----SPTW-GGLPRWNTDGS---SNSYDRARST 296

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 301 SQKWGYSDIESEFGMAKAEYDLTDSWTVysALGGQHSH----------------EIGTYSAPKLLNKNGDATVGRLDTN- 363
Cdd:PRK10003 297 APDWAYNDKEINKVFMTLKQRFADTWQA--TLNATHSEvefdskmmyvdayvdkATGMLVGPYSNYGPGFDYVGGTGWNs 374

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 364 --RIIDAISGMggVRGDFNTGAISHKVNLG--YAAQVHTDATAWRMSARNPTTNIYD-NHDVAMPDNAYFGGNYHDplvT 438
Cdd:PRK10003 375 gkRKVDALDLF--ADGSYELFGRQHNLMFGgsYSKQNNRYFSSWANIFPDEIGSFYNfNGNFPQTDWSPQSLAQDD---T 449

                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 439 SRSRTqgwLLSDTLGFFNDKVLFTAAARHQKVVVRNYSNATGLEDTSsrytqsrwmPTFGLVYKPWEQLSLYANHTEALQ 518
Cdd:PRK10003 450 THMKS---LYAATRVSLADPLHLILGARYTNWRVDTLTYSMEKNHTT---------PYAGLVYDINDNWSTYASYTSIFQ 517

                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 519 PGS--------VAPTTAANAgqstgiahskqdEVGVKIDY--GTIGGSLALFEIKKPNAISDTaGNY--GLDGEQRNRGV 586
Cdd:PRK10003 518 PQNdrdssgkyLAPITGNNY------------ELGLKSDWmnSRLTTTLAIFRIEQDNVAQST-GTPipGSNGETAYKAV 584

                        650       660       670       680       690       700       710       720
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 587 EmnvfGEPMLGLRLNASTVWLDAKQTKTaeGATD--GKDAIGVA------NFYAVLGAEYDIKPVEGLTATARVNHSGSQ 658
Cdd:PRK10003 585 D----GTVSKGVEFELNGAITDNWQLTF--GATRyiAEDNEGNAvnpnlpRTTVKLFTRYRLPVMPELTVGGGVNWQNRV 658

                        730       740       750       760       770       780       790
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 488982061 659 YADAA---NTKKLD--SYTTLDLGLRYRMRLNadqneMIWRVGVTNVTNEKYWsgiDDTGTYLFEGDPRTVRVSMSYDF 732
Cdd:PRK10003 659 YTDTVtpyGTFRAEqgSYALVDLFTRYQVTKN-----FSVQGNVNNLFDKTYD---TNVEGSIVYGAPRNFSITATYQF 729
PRK14049 PRK14049
ferrioxamine B receptor precursor protein; Provisional
 14-732 4.93e-12

ferrioxamine B receptor precursor protein; Provisional


Pssm-ID: 172541 [Multi-domain]  Cd Length: 726  Bit Score: 69.54  E-value: 4.93e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061  14 TLLALAIGAASQTAMAADAAAAKQPGEETLIVEAnetsdfKSGGDLVVpaflDGQIAHGGRLGMLGEQKAMDVPFNVIGY 93
Cdd:PRK14049  17 SALALVATAQAQDAGQESVSNEASTALETLVVNG------GSGGVITA----DGYVATSSATGAKVDTPFLETPQSISSV 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061  94 TSKLIQDQQAKTIADVVSNDAGVQAvqgyGNFAETYRIRGFKLDGDDMTMGGLAGVVPRQ------VMDTQM--LERVEI 165
Cdd:PRK14049  87 TEQQLKDRNPQTLLETLAYTPGARV----GAFGFDPRFDAFFVRGFDVTYTGVFRDNLRQpgasssIFKTEPygLEGVSI 162

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 166 FKGANSLLNGAasSGVGGMINLEPKRAEDLPTARVGVDYTSDSQVGGTLDLGRRFGDNNQFGARVNLVHREGEGAIDNDK 245
Cdd:PRK14049 163 LRGPSSALYGA--SGAGGLFNLITKRPTEEPLREVQVQYGTNNRYQGQFDFSGPVNETDPVYYRLTGLLRDADTEQVGVP 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 246 RRTTLASLGLDYRGDRFRSSLDFGYQKKTFHGGTmgvniSGVDFIPALPDNSKNYSQKWGYSDIESEFGMAKAEYD--LT 323
Cdd:PRK14049 241 DDRAYIAPAFTWKPDEDTRLTVLGEYSRTKTGGT-----AAYYNDPLTGEVTDIFAGNPAFNDSVQKQGRIGYEFEhrLN 315

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 324 DSWTV-----YSALGGQHSHEiGTYSA----PKLLNKNGDATVGRLdTNRIIDaisgmGGVRGDFNTGAISHKVNLGyaa 394
Cdd:PRK14049 316 DTFVFrqnarVSTLNIDADWA-FAYAPnaadPTLLDSSAGTYDERL-TAFVID-----NQLEAKFDTGAFEHTLLAG--- 385

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 395 qvhTDATAWRMSARNPT--TNIYDNHDVAM--PDNAYfggnyhdPLVTSRSRTQ---GWLLSDTLGFfnDKVLFTAAARH 467
Cdd:PRK14049 386 ---VDYTKLRFRALNGRgvSPPLDTKNPTQgrPVAAI-------DFSTRTVQDQwqlGTYLQDQIRY--DAWTLTAGGRY 453

                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 468 QKVV--VRNYSNATGLEDTSSRYTQSrWMPTFGLVYKPWEQLSLYANHTEALQPGSVAPTTAANAGQSTgiaHSKQDEVG 545
Cdd:PRK14049 454 DWVStdTDTTDLATDSLTTVSQKDKE-FSGRIGLTYETDFGLAPYISYSTAFSPNAGFNRATNQPFKPT---ESEQQEVG 529

                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 546 VKI---DYGTIGGsLALFEIKKPNAI-----SDTAGNYGLD---GEQRNRGVEMNVFGEPMLGLRLNASTVWLDAKQTKT 614
Cdd:PRK14049 530 VKYllpNSNTLIT-AALFNIDQTNGLyyevvFLAAGPTNIQvqrGKLRSRGFELEANTSLDNGLSLIASYTYTDVKIIQG 608

                        650       660       670       680       690       700       710       720
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 615 AEGaTDGKDAIGVANFYAVLGAEYDIK---PVEGLTATARVNHSGSQYADAANTKKLDSYTTLDLGLRYRM-RLNADQNE 690
Cdd:PRK14049 609 PEG-TIGNEVSSVPNHMASAWAHYTLPeggPLYGLGLGAGARFVGSSYGNDQNTFKNSSRVLFDASVGYDFaAIDKKYEG 687

                        730       740       750       760
                 ....*....|....*....|....*....|....*....|..
gi 488982061 691 MIWRVGVTNVTNEKywSGIDDTGtYLFEGDPRTVRVSMSYDF 732
Cdd:PRK14049 688 LMLQVNATNLFDRR--KAVCTAG-FCYRDQGRTVIGSLRYNW 726
btuB PRK10641
TonB-dependent vitamin B12 receptor BtuB;
98-304 7.45e-03

TonB-dependent vitamin B12 receptor BtuB;


Pssm-ID: 236730 [Multi-domain]  Cd Length: 614  Bit Score: 39.59  E-value: 7.45e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061  98 IQDQQAKTIADVVSNDAGVQAVQ--GYGNFAETYrIRGFK-------LDGDDMTMGGLAGVVPRQVMDTQMLERVEIFKG 168
Cdd:PRK10641  54 IDRWQSKSVNDVLRRLPGVDIAQngGLGQLSSLF-IRGTNsshvlvlIDGVRLNQAGISGSADLSQIPISLVQRIEYIRG 132

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 488982061 169 ANSLLNGaaSSGVGGMINLEPKRAEDLPTARVGVDYTSDSQVGGTLDlgRRFGDNNQFGARVNLVHREGEGAIDNDkrrt 248
Cdd:PRK10641 133 PRSAVYG--SDAIGGVVNIITTRDKPGTTLSAGWGSNGYQNYDGSTQ--QQLGDNTRVTLAGDYTYTKGFDVVAYG---- 204

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 488982061 249 tlaSLGLDYRGDRfrsslDfGYQKKTFHGG---TMGVNISG--------------VDFIP--ALPDNSKNYSQKW 304
Cdd:PRK10641 205 ---NTGTQAQPDR-----D-GFMSKTLWGGlehQFNDQWSGfvrgygydnrtdydAYYSPgsPLIDTRQLYSQSW 270
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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