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Conserved domains on  [gi|489002997|ref|WP_002913626|]
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MULTISPECIES: sulfate/thiosulfate ABC transporter permease CysT [Klebsiella]

Protein Classification

sulfate/thiosulfate ABC transporter permease CysT( domain architecture ID 10793513)

sulfate/thiosulfate ABC transporter permease CysT is part of the ABC transporter complex CysAWTP (TC 3.A.1.6.1) involved in sulfate/thiosulfate import

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK10971 PRK10971
sulfate/thiosulfate ABC transporter permease CysT;
1-277 0e+00

sulfate/thiosulfate ABC transporter permease CysT;


:

Pssm-ID: 182873  Cd Length: 277  Bit Score: 505.83  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997   1 MFAVSSKRVLPGFTLSLGTSLLFVCLILLLPLSALVMQLAQMSWAQYWDVITNPQVVAAYKVTLLSAFVASIFNGVFGLL 80
Cdd:PRK10971   1 MLAVSSKRVLPGFTLSLGTSLLFVCLILLLPLSALVMQLSQMSWAQYWEVITNPQVVAAYKVTLLSAFVASIFNAVFGLL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997  81 MAWILTRYRFPGRTLLDALMDLPFALPTAVAGLTLASLFSVNGIYGEWLAKFDIKVTYTWLGIAVAMAFTSIPFVVRTVQ 160
Cdd:PRK10971  81 MAWILTRYRFPGRTLLDALMDLPFALPTAVAGLTLASLFSVNGWYGEWLAKFDIKVTYTWLGIAVAMAFTSIPFVVRTVQ 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997 161 PVLEELGPEYEEAAETLGATRWQSFRKVVLPELSPALLAGIALSFTRSLGEFGAVIFIAGNIAWKTEVTSLMIFIRLQEF 240
Cdd:PRK10971 161 PVLEELGPEYEEAAETLGATRWQSFRKVVLPELSPALLAGVALSFTRSLGEFGAVIFIAGNIAWKTEVTSLMIFVRLQEF 240

                        250       260       270
                 ....*....|....*....|....*....|....*..
gi 489002997 241 DYPAASAIASVILAASLLLLFSINTLQSRFGRRVVGH 277
Cdd:PRK10971 241 DYPAASAIASVILAASLLLLFSINTLQSRFGRRVVGH 277
 
Name Accession Description Interval E-value
PRK10971 PRK10971
sulfate/thiosulfate ABC transporter permease CysT;
1-277 0e+00

sulfate/thiosulfate ABC transporter permease CysT;


Pssm-ID: 182873  Cd Length: 277  Bit Score: 505.83  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997   1 MFAVSSKRVLPGFTLSLGTSLLFVCLILLLPLSALVMQLAQMSWAQYWDVITNPQVVAAYKVTLLSAFVASIFNGVFGLL 80
Cdd:PRK10971   1 MLAVSSKRVLPGFTLSLGTSLLFVCLILLLPLSALVMQLSQMSWAQYWEVITNPQVVAAYKVTLLSAFVASIFNAVFGLL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997  81 MAWILTRYRFPGRTLLDALMDLPFALPTAVAGLTLASLFSVNGIYGEWLAKFDIKVTYTWLGIAVAMAFTSIPFVVRTVQ 160
Cdd:PRK10971  81 MAWILTRYRFPGRTLLDALMDLPFALPTAVAGLTLASLFSVNGWYGEWLAKFDIKVTYTWLGIAVAMAFTSIPFVVRTVQ 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997 161 PVLEELGPEYEEAAETLGATRWQSFRKVVLPELSPALLAGIALSFTRSLGEFGAVIFIAGNIAWKTEVTSLMIFIRLQEF 240
Cdd:PRK10971 161 PVLEELGPEYEEAAETLGATRWQSFRKVVLPELSPALLAGVALSFTRSLGEFGAVIFIAGNIAWKTEVTSLMIFVRLQEF 240

                        250       260       270
                 ....*....|....*....|....*....|....*..
gi 489002997 241 DYPAASAIASVILAASLLLLFSINTLQSRFGRRVVGH 277
Cdd:PRK10971 241 DYPAASAIASVILAASLLLLFSINTLQSRFGRRVVGH 277
CysU COG0555
ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism]; ...
 6-272 7.68e-116

ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440321 [Multi-domain]  Cd Length: 268  Bit Score: 333.26  E-value: 7.68e-116
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997   6 SKRVLPGFTLSLGTSLLFVCLILLLPLSALVMQLAQMSWAQYWDVITNPQVVAAYKVTLLSAFVASIFNGVFGLLMAWIL 85
Cdd:COG0555    2 SRRVLPGFGLTLGLTLLYLSLIVLLPLAALVLKAAGLGWAEFWAVLTSPRVLAALKLSLGTALIAALINLVFGLPLAWVL 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997  86 TRYRFPGRTLLDALMDLPFALPTAVAGLTLASLFSVNGIYGEWLAKFDIKVTYTWLGIAVAMAFTSIPFVVRTVQPVLEE 165
Cdd:COG0555   82 VRYRFPGKRLVDALVDLPFALPTAVAGIALLLLFGPNGWLGQLLAPLGIKVAFTPLGIVLAQTFVSLPFVVRTVQPVLEE 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997 166 LGPEYEEAAETLGATRWQSFRKVVLPELSPALLAGIALSFTRSLGEFGAVIFIAGNIAWKTEVTSLMIFIRLQEFDYPAA 245
Cdd:COG0555  162 LDPELEEAAATLGASRWQTFRRVILPLLLPALLTGFALAFARALGEFGAVIFIAGNLPMKTEILPLLIYLKLEEGDYAGA 241

                        250       260
                 ....*....|....*....|....*..
gi 489002997 246 SAIASVILAASLLLLFSINTLQSRFGR 272
Cdd:COG0555  242 TAIALVLLLISFLLLLLINLLQRRSRR 268
3a0106s02 TIGR00969
sulfate ABC transporter, permease protein; This model describes a subfamily of both CysT and ...
 1-269 8.63e-111

sulfate ABC transporter, permease protein; This model describes a subfamily of both CysT and CysW, paralogous and generally tandemly encoded permease proteins of the sulfate ABC transporter. [Transport and binding proteins, Anions]


Pssm-ID: 273370  Cd Length: 271  Bit Score: 320.84  E-value: 8.63e-111
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997    1 MFAVSSKR--VLPGFTLSLGTSLLFVCLILLLPLSALVMQLAQMSWAQYWDVITNPQVVAAYKVTLLSAFVASIFNGVFG 78
Cdd:TIGR00969   1 MTALPSARfrFIKWGKLSLGIALLYVFLILILPVAALFVQAFSKGLGQFWQNATDPIAVSAYNLTLLMALIAVPLNGVFG 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997   79 LLMAWILTRYRFPGRTLLDALMDLPFALPTAVAGLTLASLFSVNGIYGEWLAKFDIKVTYTWLGIAVAMAFTSIPFVVRT 158
Cdd:TIGR00969  81 LLIAWVLTRYQFPGRKLLDALIDLPFALSPVVAGLTLALLYGSNGWLGSWLASFGIQIIFTWPGMALAMIFVSLPFVVRE 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997  159 VQPVLEELGPEYEEAAETLGATRWQSFRKVVLPELSPALLAGIALSFTRSLGEFGAVIFIAGNIAWKTEVTSLMIFIRLQ 238
Cdd:TIGR00969 161 VQPVLEELGTEAEEAAATLGASGWQTFWRVTLPSIRWALLYGVVLTFARALGEFGAVVVVSGNIPGKTLTLPLLIEERLE 240

                         250       260       270
                  ....*....|....*....|....*....|.
gi 489002997  239 EFDYPAASAIASVILAASLLLLFSINTLQSR 269
Cdd:TIGR00969 241 QYDYPGAYVIAAVLLLVSLVTLFLINALQAR 271
TM_PBP2 cd06261
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding ...
 62-252 3.05e-27

Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. For these transporters the ABCs and TMs are on independent polypeptide chains. These systems transport a diverse range of substrates. Most are specific for a single substrate or a group of related substrates; however some transporters are more promiscuous, transporting structurally diverse substrates such as the histidine/lysine and arginine transporter in Enterobacteriaceae. In the latter case, this is achieved through binding different PBPs with different specificities to the TMs. For other promiscuous transporters such as the multiple-sugar transporter Msm of Streptococcus mutans, the PBP has a wide substrate specificity. These transporters include the maltose-maltodextrin, phosphate and sulfate transporters, among others.


Pssm-ID: 119394 [Multi-domain]  Cd Length: 190  Bit Score: 104.28  E-value: 3.05e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997  62 VTLLSAFVASIFNGVFGLLMAWILTRYRFPGRTLLDALMDLPFALPTAVAGLTLASLFSVNGIygewlakFDIKVTYTWL 141
Cdd:cd06261    3 NTLLLALIATLLALVLGLLLGIILARKRGKLDRLLRRIIDLLLSLPSLVLGLLLVLLFGVLLG-------WGILPGLGLP 75

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997 142 GIAVAMAFTsIPFVVRTVQPVLEELGPEYEEAAETLGATRWQSFRKVVLPELSPALLAGIALSFTRSLGEFGAVIFIAGN 221
Cdd:cd06261   76 ALILALLLI-APFARLIRRAALESIPKDLVEAARALGASPWQIFRRIILPLALPPILTGLVLAFARALGEFALVSFLGGG 154

                        170       180       190
                 ....*....|....*....|....*....|.
gi 489002997 222 IAWKTEVTSLMIFIRLQEFDYPAASAIASVI 252
Cdd:cd06261  155 EAPGPGTGLLLIFAILFPGDLGVAAAVALIL 185
ABC_perm1 NF038017
ABC transporter permease; Proteins of this family are the permease subunit of an ABC ...
 61-228 1.02e-16

ABC transporter permease; Proteins of this family are the permease subunit of an ABC transporter complex, which may be involved in tungstate uptake.


Pssm-ID: 411610 [Multi-domain]  Cd Length: 184  Bit Score: 76.05  E-value: 1.02e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997  61 KVTLLSAFVASIFNGVFGLLMAWiltrYRFPGRTLLDALMDLPFALPTAVAGLTLASLFSVNGIYGEWlakfdiKVTYTW 140
Cdd:NF038017   3 RVSGTATLIAALIGIPLGALLAL----RRFPGRRLVISLLNTLMGLPPVVVGLIVYLLLSRSGPLGFL------GLLYTP 72

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997 141 LGIAVAMAFTSIPFVVRTVQPVLEELGPEYEEAAETLGATRWQSFRkVVLPELSPALLAGIALSFTRSLGEFGAVIFIAG 220
Cdd:NF038017  73 TAMIIAQAVLALPIVAGLTLAAVQGLDPELRLQILSLGATRWQALW-TLLKEARFALLAAVLAGFGRAISEVGAVMMVGG 151


                 ....*...
gi 489002997 221 NIAWKTEV 228
Cdd:NF038017 152 NIRGYTRV 159
BPD_transp_1 pfam00528
Binding-protein-dependent transport system inner membrane component; The alignments cover the ...
 76-274 1.00e-13

Binding-protein-dependent transport system inner membrane component; The alignments cover the most conserved region of the proteins, which is thought to be located in a cytoplasmic loop between two transmembrane domains. The members of this family have a variable number of transmembrane helices.


Pssm-ID: 334128 [Multi-domain]  Cd Length: 183  Bit Score: 67.71  E-value: 1.00e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997   76 VFGLLMAwilTRYRFPGRTLLDALMDLPFALPTAVAGLTLaslfsvngiygeWLAKFDIKVTYTWLGIAVAMAFTSIPFV 155
Cdd:pfam00528   3 PLGIIAA---LRRGRRLDRLLRPLIDLLQALPSFVLAILL------------VVIAILSILGHGILPAIILALLGWAGYA 67

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997  156 VRTVQPVLEELGPEYEEAAETLGATRWQSFRKVVLPELSPALLAGIALSFTRSLGEFGAVIFIAGNIAwktevTSLMIFI 235
Cdd:pfam00528  68 RLIRRAALRSLPSDLVEAARALGASRWQIFRKIILPNALPPILTGLALAFGGALGGAVLLEFLGSWPG-----LGLLLIE 142

                         170       180       190
                  ....*....|....*....|....*....|....*....
gi 489002997  236 RLQEFDYPAASAIASVILAASLLLLFSINTLQSRFGRRV 274
Cdd:pfam00528 143 AILGYDYPEIQGPVLAAALILLLLNLLVDILQRLLDPRV 181
 
Name Accession Description Interval E-value
PRK10971 PRK10971
sulfate/thiosulfate ABC transporter permease CysT;
1-277 0e+00

sulfate/thiosulfate ABC transporter permease CysT;


Pssm-ID: 182873  Cd Length: 277  Bit Score: 505.83  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997   1 MFAVSSKRVLPGFTLSLGTSLLFVCLILLLPLSALVMQLAQMSWAQYWDVITNPQVVAAYKVTLLSAFVASIFNGVFGLL 80
Cdd:PRK10971   1 MLAVSSKRVLPGFTLSLGTSLLFVCLILLLPLSALVMQLSQMSWAQYWEVITNPQVVAAYKVTLLSAFVASIFNAVFGLL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997  81 MAWILTRYRFPGRTLLDALMDLPFALPTAVAGLTLASLFSVNGIYGEWLAKFDIKVTYTWLGIAVAMAFTSIPFVVRTVQ 160
Cdd:PRK10971  81 MAWILTRYRFPGRTLLDALMDLPFALPTAVAGLTLASLFSVNGWYGEWLAKFDIKVTYTWLGIAVAMAFTSIPFVVRTVQ 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997 161 PVLEELGPEYEEAAETLGATRWQSFRKVVLPELSPALLAGIALSFTRSLGEFGAVIFIAGNIAWKTEVTSLMIFIRLQEF 240
Cdd:PRK10971 161 PVLEELGPEYEEAAETLGATRWQSFRKVVLPELSPALLAGVALSFTRSLGEFGAVIFIAGNIAWKTEVTSLMIFVRLQEF 240

                        250       260       270
                 ....*....|....*....|....*....|....*..
gi 489002997 241 DYPAASAIASVILAASLLLLFSINTLQSRFGRRVVGH 277
Cdd:PRK10971 241 DYPAASAIASVILAASLLLLFSINTLQSRFGRRVVGH 277
CysU COG0555
ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism]; ...
 6-272 7.68e-116

ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440321 [Multi-domain]  Cd Length: 268  Bit Score: 333.26  E-value: 7.68e-116
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997   6 SKRVLPGFTLSLGTSLLFVCLILLLPLSALVMQLAQMSWAQYWDVITNPQVVAAYKVTLLSAFVASIFNGVFGLLMAWIL 85
Cdd:COG0555    2 SRRVLPGFGLTLGLTLLYLSLIVLLPLAALVLKAAGLGWAEFWAVLTSPRVLAALKLSLGTALIAALINLVFGLPLAWVL 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997  86 TRYRFPGRTLLDALMDLPFALPTAVAGLTLASLFSVNGIYGEWLAKFDIKVTYTWLGIAVAMAFTSIPFVVRTVQPVLEE 165
Cdd:COG0555   82 VRYRFPGKRLVDALVDLPFALPTAVAGIALLLLFGPNGWLGQLLAPLGIKVAFTPLGIVLAQTFVSLPFVVRTVQPVLEE 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997 166 LGPEYEEAAETLGATRWQSFRKVVLPELSPALLAGIALSFTRSLGEFGAVIFIAGNIAWKTEVTSLMIFIRLQEFDYPAA 245
Cdd:COG0555  162 LDPELEEAAATLGASRWQTFRRVILPLLLPALLTGFALAFARALGEFGAVIFIAGNLPMKTEILPLLIYLKLEEGDYAGA 241

                        250       260
                 ....*....|....*....|....*..
gi 489002997 246 SAIASVILAASLLLLFSINTLQSRFGR 272
Cdd:COG0555  242 TAIALVLLLISFLLLLLINLLQRRSRR 268
3a0106s02 TIGR00969
sulfate ABC transporter, permease protein; This model describes a subfamily of both CysT and ...
 1-269 8.63e-111

sulfate ABC transporter, permease protein; This model describes a subfamily of both CysT and CysW, paralogous and generally tandemly encoded permease proteins of the sulfate ABC transporter. [Transport and binding proteins, Anions]


Pssm-ID: 273370  Cd Length: 271  Bit Score: 320.84  E-value: 8.63e-111
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997    1 MFAVSSKR--VLPGFTLSLGTSLLFVCLILLLPLSALVMQLAQMSWAQYWDVITNPQVVAAYKVTLLSAFVASIFNGVFG 78
Cdd:TIGR00969   1 MTALPSARfrFIKWGKLSLGIALLYVFLILILPVAALFVQAFSKGLGQFWQNATDPIAVSAYNLTLLMALIAVPLNGVFG 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997   79 LLMAWILTRYRFPGRTLLDALMDLPFALPTAVAGLTLASLFSVNGIYGEWLAKFDIKVTYTWLGIAVAMAFTSIPFVVRT 158
Cdd:TIGR00969  81 LLIAWVLTRYQFPGRKLLDALIDLPFALSPVVAGLTLALLYGSNGWLGSWLASFGIQIIFTWPGMALAMIFVSLPFVVRE 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997  159 VQPVLEELGPEYEEAAETLGATRWQSFRKVVLPELSPALLAGIALSFTRSLGEFGAVIFIAGNIAWKTEVTSLMIFIRLQ 238
Cdd:TIGR00969 161 VQPVLEELGTEAEEAAATLGASGWQTFWRVTLPSIRWALLYGVVLTFARALGEFGAVVVVSGNIPGKTLTLPLLIEERLE 240

                         250       260       270
                  ....*....|....*....|....*....|.
gi 489002997  239 EFDYPAASAIASVILAASLLLLFSINTLQSR 269
Cdd:TIGR00969 241 QYDYPGAYVIAAVLLLVSLVTLFLINALQAR 271
permease_CysT TIGR02139
sulfate ABC transporter, permease protein CysT; This model represents CysT, one of two ...
 9-273 9.31e-111

sulfate ABC transporter, permease protein CysT; This model represents CysT, one of two homologous, tandem permeases in the sulfate ABC transporter system; the other is CysW (TIGR02140). The sulfate transporter has been described in E. coli as transporting sulfate, thiosulfate, selenate, and selenite. Sulfate transporters may also transport molybdate ion if a specific molybdate transporter is not present. [Transport and binding proteins, Anions]


Pssm-ID: 131194  Cd Length: 265  Bit Score: 320.43  E-value: 9.31e-111
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997    9 VLPGFTLSLGTSLLFVCLILLLPLSALVMQLAQMSWAQYWDVITNPQVVAAYKVTLLSAFVASIFNGVFGLLMAWILTRY 88
Cdd:TIGR02139   1 VLPGFGLSLGVTLTYLSLIVLLPLAALFLKASQLGWAGFWQIITEPRVLAAYKLSFGTALIAALINAVFGTLLAWVLVRY 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997   89 RFPGRTLLDALMDLPFALPTAVAGLTLASLFSVNGIYGEWLAKFDIKVTYTWLGIAVAMAFTSIPFVVRTVQPVLEELGP 168
Cdd:TIGR02139  81 RFPGKRIVDALVDLPFALPTAVAGIALATLYSPNGWIGSFLAPLGIKIAFTPLGIVIALVFVSLPFVVRTVQPVLEEIEK 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997  169 EYEEAAETLGATRWQSFRKVVLPELSPALLAGIALSFTRSLGEFGAVIFIAGNIAWKTEVTSLMIFIRLQEFDYPAASAI 248
Cdd:TIGR02139 161 ELEEAAASLGASRWQTFWRVILPALLPALLTGFALAFARAVGEYGSVIFIAGNLPMKTEIAPLLIFQKLEQYDYAGATAI 240

                         250       260
                  ....*....|....*....|....*
gi 489002997  249 ASVILAASLLLLFSINTLQSRFGRR 273
Cdd:TIGR02139 241 ASVMLIISFVILLFINLLQWWALRY 265
cysT CHL00187
sulfate transport protein; Provisional
 41-240 2.22e-82

sulfate transport protein; Provisional


Pssm-ID: 214388 [Multi-domain]  Cd Length: 237  Bit Score: 247.24  E-value: 2.22e-82
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997  41 QMSWAQYWDVITNPQVVAAYKVTLLSAFVASIFNGVFGLLMAWILTRYRFPGRTLLDALMDLPFALPTAVAGLTLASLFS 120
Cdd:CHL00187  38 QQPWSDFLQKATEPIALSAYSLTLSMALIAALINGFFGLLIAWVLVRYNFPGKRLLDAAVDLPFALPTSVAGLTLATVYG 117

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997 121 VNGIYGEWLAKFDIKVTYTWLGIAVAMAFTSIPFVVRTVQPVLEELGPEYEEAAETLGATRWQSFRKVVLPELSPALLAG 200
Cdd:CHL00187 118 DNGWIGHLLSHLGIQIVFTKLGVLLAMIFVSFPFVVRTIQPVLQEIEKELEEAAWSLGASPWQTFWKVIFPPLIPALLTG 197

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|
gi 489002997 201 IALSFTRSLGEFGAVIFIAGNIAWKTEVTSLMIFIRLQEF 240
Cdd:CHL00187 198 LALTFSRAIGEYGSIVIISSNIPFKDLVASVLIFQSLEQY 237
ModB COG4149
ABC-type molybdate transport system, permease component ModB [Inorganic ion transport and ...
 52-273 7.24e-58

ABC-type molybdate transport system, permease component ModB [Inorganic ion transport and metabolism]; ABC-type molybdate transport system, permease component ModB is part of the Pathway/BioSystem: Molybdopterin biosynthesis


Pssm-ID: 443320 [Multi-domain]  Cd Length: 223  Bit Score: 184.48  E-value: 7.24e-58
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997  52 TNPQVVAAYKVTLLSAFVASIFNGVFGLLMAWILTRYRFPGRTLLDALMDLPFALPTAVAGLTLASLFSVNGIYGEWLAK 131
Cdd:COG4149    1 LSPEDWSALWLSLKVALIATLLLLLLGIPLAWWLARTRFRGKGLLEALVTLPLVLPPTVLGFYLLLLFGRNGPLGQLLEE 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997 132 -FDIKVTYTWLGIAVAMAFTSIPFVVRTVQPVLEELGPEYEEAAETLGATRWQSFRKVVLPELSPALLAGIALSFTRSLG 210
Cdd:COG4149   81 lFGISLVFTWTGAVLASVVVSLPLMVQPLRAAFEAVDPRLEEAARTLGASPWRVFFRVTLPLAKPGILAGAVLAFARALG 160

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 489002997 211 EFGAVIFIAGNIAWKTEVTSLMIFIRLQEFDYPAASAIASVILAASLLLLFSINTLQSRFGRR 273
Cdd:COG4149  161 EFGATLMFAGNIPGKTQTLPLAIYDAVEAGDYAAAHALSLILLAISFVVLLLLNLLNRRRRRR 223
permease_CysW TIGR02140
sulfate ABC transporter, permease protein CysW; This model represents CysW, one of two ...
 45-272 8.54e-55

sulfate ABC transporter, permease protein CysW; This model represents CysW, one of two homologous, tandem permeases in the sulfate ABC transporter system; the other is CysT (TIGR02139). The sulfate transporter has been described in E. coli as transporting sulfate, thiosulfate, selenate, and selenite. Sulfate transporters may also transport molybdate ion if a specific molybdate transporter is not present. [Transport and binding proteins, Anions]


Pssm-ID: 162725  Cd Length: 261  Bit Score: 177.97  E-value: 8.54e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997   45 AQYWDVITNPQVVAAYKVTLLSAFVASIFNGVFGLLMAWILTRYRFPGRTLLDALMDLPFALPTAVAGLTLASLFSVNGI 124
Cdd:TIGR02140  34 GVFFAAISDPDALSAIKLTLLVALIVVPLNTVFGVCAAWVLTRFQFPGKRLLLTIIDLPFSVSPVVAGLIFVLLYGSQGW 113

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997  125 YGEWLAKFDIKVTYTWLGIAVAMAFTSIPFVVRTVQPVLEELGPEYEEAAETLGATRWQSFRKVVLPELSPALLAGIALS 204
Cdd:TIGR02140 114 LGPWLEDLDIKIIFSLPGIVLATMFVTCPFVARELIPVMEEQGTEQEEAALTLGASWWQTFWRVTLPNIKWGLLYGVILC 193

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 489002997  205 FTRSLGEFGAVIFIAGNIAWKTEVTSLMIFIRLQEFDYPAASAIASVILAASLLLLFSINTLQSRFGR 272
Cdd:TIGR02140 194 NARAMGEFGAVSVVSGHIRGKTNTLPLHVELLYNEYQSYAAFAAASLLALLALVTLVLKAILERRQGR 261
Mo_ABC_porter TIGR01581
NifC-like ABC-type porter; This model describes a clade of ABC porter genes with relatively ...
 39-249 5.00e-47

NifC-like ABC-type porter; This model describes a clade of ABC porter genes with relatively weak homology compared to its neighbor clades, the molybdate (TIGR02141) and sulfate (TIGR00969) porters. Neighbor-Joining, PAM-distance phylogenetic trees support the separation of the clades in this way. Included in this group is a gene designated NifC in Clostridium pasturianum. It would be reasonable to presume that NifC acts as a molybdate porter since the most common form of nitrogenase is a molybdoenzyme. Several other sequences falling within the scope of this model are annotated as molybdate porters and one, from Halobacterium, is annotated as a sulfate porter. There is presently no experimental evidence to support annotations with this degree of specificity.


Pssm-ID: 130643  Cd Length: 225  Bit Score: 156.79  E-value: 5.00e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997   39 LAQMSWAQYWDVITNPQVVAAYKVTLLSAFVASIFNGVFGLLMAWILTRYRFPGRTLLDALMDLPFALPTAVAGLTLASL 118
Cdd:TIGR01581   2 IRRLGGSHILSALTDPENIKALRLSLATSLASLLLAVIIGIPTAYVLARVRFPLKKLLDTLLDLPMVLPPLVAGLALLLL 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997  119 FSVNGIYGEWLAKFDIKVTYTWLGIAVAMAFTSIPFVVRTVQPVLEELGPEYEEAAETLGATRWQSFRKVVLPELSPALL 198
Cdd:TIGR01581  82 FGRNGLLGPYLEAAGIQVIFSTLGVVLAQTFVASPYYVRVARSTFKSVDPRYEDVARSLGAGPLETFRKITLPMARPGLL 161

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|.
gi 489002997  199 AGIALSFTRSLGEFGAVIFIAGNIAWKTEVTSLMIFIRLQEFDYPAASAIA 249
Cdd:TIGR01581 162 AGLVLAWARALGEFGATLMFAGSIQGKTRTLPLAIYLNIQSDNIEAAVASA 212
modB_ABC TIGR02141
molybdate ABC transporter, permease protein; This model describes the permease protein, ModB, ...
 62-269 6.85e-46

molybdate ABC transporter, permease protein; This model describes the permease protein, ModB, of the molybdate ABC transporter. This system has been characterized in E. coli, Staphylococcus carnosus, Rhodobacter capsulatus and Azotobacter vinlandii. Molybdate is chemically similar to sulfate, thiosulfate, and selenate. These related substrates, and sometimes molybdate itself, can be transported by the homologous sulfate receptor. Some apparent molybdenum transport operons include a permease related to this ModB, although less similar than some sulfate permease proteins and not included in this model. [Transport and binding proteins, Anions]


Pssm-ID: 273993 [Multi-domain]  Cd Length: 208  Bit Score: 153.17  E-value: 6.85e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997   62 VTLLSAFVASIFNGVFGLLMAWILTRYRFPGRTLLDALMDLPFALPTAVAGLTLASLFSVNGIYGEWLAKFDIKVTYTWL 141
Cdd:TIGR02141   2 LSLKVAVIATLLLLPLGIPVAWLLARSRFRGKPLLEVLVTLPLVLPPTVLGFYLLIAFGPNGPIGKLLELFGISLVFTFT 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997  142 GIAVAMAFTSIPFVVRTVQPVLEELGPEYEEAAETLGATRWQSFRKVVLPELSPALLAGIALSFTRSLGEFGAVIFIAGN 221
Cdd:TIGR02141  82 GAVLASVIVSFPLMVQPIRAAFEAVDPDLEEAARTLGASESQTFLKVTLPLAFPGLLAGAVLSFARALGEFGATLMFAGN 161

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*...
gi 489002997  222 IAWKTEVTSLMIFIRLqEFDYPAASAIASVILAASLLLLFSINTLQSR 269
Cdd:TIGR02141 162 IPGETQTIPLAIYDAV-ESDYELAHQLSLVLLAISLIVLLLVELLNKR 208
cysW PRK11602
sulfate/thiosulfate ABC transporter permease CysW;
48-247 5.17e-43

sulfate/thiosulfate ABC transporter permease CysW;


Pssm-ID: 183225  Cd Length: 283  Bit Score: 147.98  E-value: 5.17e-43
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997  48 WDVITNPQVVAAYKVTLLSAFVASIFNGVFGLLMAWILTRYRFPGRTLLDALMDLPFALPTAVAGLTLASLFSVNGIYGE 127
Cdd:PRK11602  54 LQNLADPDMLHAIWLTVLIALIAVPVNLVFGILLAWLVTRFNFPGRQLLLTLLDIPFAVSPVVAGLVYLLFYGSNGPLGG 133

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997 128 WLAKFDIKVTYTWLGIAVAMAFTSIPFVVRTVQPVLEELGPEYEEAAETLGATRWQSFRKVVLPELSPALLAGIALSFTR 207
Cdd:PRK11602 134 WLDEHNLQLMFSWPGMVLVTIFVTCPFVVRELVPVMLSQGSQEDEAAILLGASGWQMFRRVTLPNIRWALLYGVVLTNAR 213

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|
gi 489002997 208 SLGEFGAVIFIAGNIawKTEVTSLMIFIRLQEFDYPAASA 247
Cdd:PRK11602 214 AIGEFGAVSVVSGSI--RGETLSLPLQIELLEQDYNTVGS 251
modB PRK09421
molybdate ABC transporter permease subunit;
54-238 4.50e-41

molybdate ABC transporter permease subunit;


Pssm-ID: 181841  Cd Length: 229  Bit Score: 141.21  E-value: 4.50e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997  54 PQVVAAYKVTLLSAFVASIFNGVFGLLMAWILTRYRFPGRTLLDALMDLPFALPTAVAGLTLASLFSVNGIYGEWLAK-F 132
Cdd:PRK09421   5 DPEWQAVLLSLKVSSVAVLFSLPFGILVAWLLARCRFPGKSLLDSLLHLPLVLPPVVTGYLLLISMGRRGFIGQWLYEwF 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997 133 DIKVTYTWLGIAVAMAFTSIPFVVRTVQPVLEELGPEYEEAAETLGATRWQSFRKVVLPELSPALLAGIALSFTRSLGEF 212
Cdd:PRK09421  85 GISFAFSWRGAALAAAVMAFPLMVRAIRLSLEAVDRKLEQAARTLGASPWRVFFTITLPLTLPGIIAGTVLAFARSLGEF 164

                        170       180
                 ....*....|....*....|....*.
gi 489002997 213 GAVIFIAGNIAWKTEVTSLMIFIRLQ 238
Cdd:PRK09421 165 GATITFVSNIPGETQTIPSAMYTLIQ 190
FbpB COG1178
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];
36-252 4.57e-40

ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440791 [Multi-domain]  Cd Length: 538  Bit Score: 145.69  E-value: 4.57e-40
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997  36 VMQLAQMSWAQYWDVITNPQVVAAYKVTLLSAFVASIFNGVFGLLMAWILTRYRFPGRTLLDALMDLPFALPTAVAGLTL 115
Cdd:COG1178   32 LLRAFTDGLANFWALLSDPYLWRALGNTLLLALLVTLLSLLLGVPLAWLLARTDFPGRRLLRWLLLLPLALPPYVVALAW 111

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997 116 ASLFSVNGIYGEWLAK------FDIkvtYTWLGIAVAMAFTSIPFVVRTVQPVLEELGPEYEEAAETLGATRWQSFRKVV 189
Cdd:COG1178  112 IALFGPNGLLNTLLRAlfglepPDI---YGLGGIILVLVLFNYPYVYLLLRAALRSIDASLEEAARSLGASPWRAFRRVT 188

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 489002997 190 LPELSPALLAGIALSFTRSLGEFGAVIFIAGNIawktEVTSLMIFIRLQ-EFDYPAASAIASVI 252
Cdd:COG1178  189 LPLLRPAIAAGALLVFLLCLADFGTPLVLGGGY----TTLTTAIYQAWLgDFDLGAAAALALVL 248
PotC COG1177
ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport ...
 43-273 1.32e-39

ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism];


Pssm-ID: 440790 [Multi-domain]  Cd Length: 262  Bit Score: 138.71  E-value: 1.32e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997  43 SWAQYWDVITNPQVVAAYKVTLLSAFVASIFNGVFGLLMAWILTRYRFPGRTLLDALMDLPFALPTAVAGLTLASLFSVN 122
Cdd:COG1177   46 TLRWYAELFSDPRLLDALLNSLLIALLSTLLATVLGTPAALALARYRFRGRRLLLALLLLPLVVPGIVLGVALLLLFSAL 125

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997 123 GIYGewlakfdikvtyTWLGIAVAMAFTSIPFVVRTVQPVLEELGPEYEEAAETLGATRWQSFRKVVLPELSPALLAGIA 202
Cdd:COG1177  126 GLSG------------GLWGLILAHVVFTLPFVVLVVLARLQGFDPSLEEAARDLGASPWQTFRRVTLPLIAPGILAGAL 193

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 489002997 203 LSFTRSLGEFGAVIFIAGNiawKTEVTSLMIFIRLQEFDYPAASAIASVILAASLLLLFSINTLQSRFGRR 273
Cdd:COG1177  194 LAFTLSFDEFVITLFLAGP---GVTTLPVYIYSMIRRGISPEINALSTLLILLSLLLLLLAERLRRRGERR 261
FbpB COG1178
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];
41-252 7.83e-33

ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440791 [Multi-domain]  Cd Length: 538  Bit Score: 125.66  E-value: 7.83e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997  41 QMSWAQYWDVITNPQVVAAYKVTLLSAFVASIFNGVFGLLMAWILTRYRFPGRTLLDALMDLPFALPTAVAGLTLasLFS 120
Cdd:COG1178  321 NLTLDNYRFVLLDPSLLRALLNSLLLALLAALLAVLLALLLAYLVRRRRGRLARLLDRLAMLPYAVPGIVLGLGL--LLL 398

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997 121 VNGIYGEWLakfdikvTYTWLGIAVAMAFTSIPFVVRTVQPVLEELGPEYEEAAETLGATRWQSFRKVVLPELSPALLAG 200
Cdd:COG1178  399 FNRPLPLLL-------YGTLAILVLAYVVRFLPFALRSLEAALAQIDPSLEEAARSLGASPLRTLRRVTLPLLRPGLLAA 471

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|..
gi 489002997 201 IALSFTRSLGEFGAVIFIAGNiawKTEVTSLMIFIRLQEFDYPAASAIASVI 252
Cdd:COG1178  472 ALLVFVTSMKELSATLLLRPP---GFETLAVLIYQLASSGRYGEAAALALLL 520
PotB COG1176
ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport ...
 43-251 2.35e-28

ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport and metabolism];


Pssm-ID: 440789 [Multi-domain]  Cd Length: 287  Bit Score: 109.47  E-value: 2.35e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997  43 SWAQYWDVITNPQVVAAYKVTLLSAFVASIFNGVFGLLMAWILTRYRFPGRTLLDALMDLPFALPTAVAGLTLASLFSVN 122
Cdd:COG1176   52 TLENYARLFTDPLYLKVLLRTLWIALLTTLICLLLGYPIAYFLARAPPRWRNLLLLLVILPFWTSFLVRTYAWIVLLGRN 131

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997 123 GIYGEWLAKF-----DIKVTYTWLGIAVAMAFTSIPFVVRTVQPVLEELGPEYEEAAETLGATRWQSFRKVVLPELSPAL 197
Cdd:COG1176  132 GLLNSLLLALglidePLRLLYTEFAVVIGLVYVYLPFMVLPLYAALEKIDPSLLEAARDLGASPWQTFRRVILPLSLPGI 211

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 489002997 198 LAGIALSFTRSLGEFGAVIFIAGNiawKTEVTSLMIFIR-LQEFDYPAASAIASV 251
Cdd:COG1176  212 IAGSLLVFIPALGAFVTPALLGGG---KVLMIGNLIYQQfLSALNWPLAAALAVV 263
TM_PBP2 cd06261
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding ...
 62-252 3.05e-27

Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. For these transporters the ABCs and TMs are on independent polypeptide chains. These systems transport a diverse range of substrates. Most are specific for a single substrate or a group of related substrates; however some transporters are more promiscuous, transporting structurally diverse substrates such as the histidine/lysine and arginine transporter in Enterobacteriaceae. In the latter case, this is achieved through binding different PBPs with different specificities to the TMs. For other promiscuous transporters such as the multiple-sugar transporter Msm of Streptococcus mutans, the PBP has a wide substrate specificity. These transporters include the maltose-maltodextrin, phosphate and sulfate transporters, among others.


Pssm-ID: 119394 [Multi-domain]  Cd Length: 190  Bit Score: 104.28  E-value: 3.05e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997  62 VTLLSAFVASIFNGVFGLLMAWILTRYRFPGRTLLDALMDLPFALPTAVAGLTLASLFSVNGIygewlakFDIKVTYTWL 141
Cdd:cd06261    3 NTLLLALIATLLALVLGLLLGIILARKRGKLDRLLRRIIDLLLSLPSLVLGLLLVLLFGVLLG-------WGILPGLGLP 75

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997 142 GIAVAMAFTsIPFVVRTVQPVLEELGPEYEEAAETLGATRWQSFRKVVLPELSPALLAGIALSFTRSLGEFGAVIFIAGN 221
Cdd:cd06261   76 ALILALLLI-APFARLIRRAALESIPKDLVEAARALGASPWQIFRRIILPLALPPILTGLVLAFARALGEFALVSFLGGG 154

                        170       180       190
                 ....*....|....*....|....*....|.
gi 489002997 222 IAWKTEVTSLMIFIRLQEFDYPAASAIASVI 252
Cdd:cd06261  155 EAPGPGTGLLLIFAILFPGDLGVAAAVALIL 185
UgpA COG1175
ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism];
44-252 2.98e-20

ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism];


Pssm-ID: 440788 [Multi-domain]  Cd Length: 298  Bit Score: 87.88  E-value: 2.98e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997  44 WAQYWDVITNPQVVAAYKVTLLSAFVASIFNGVFGLLMAWILTRyRFPGRTLLDALMDLPFALPTAVAGLTLASLFSVN- 122
Cdd:COG1175   62 LDNYARLFTDPRFWNALGNTLLFTVVSVPLQLVLGLLLALLLNR-KLRGRGFFRTLFFLPWVISPVVVALIWKWLFNPDy 140

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997 123 GIYGEWLAKFDIK-------VTYTWLGIAVAMAFTSIPFVVRTVQPVLEELGPEYEEAAETLGATRWQSFRKVVLPELSP 195
Cdd:COG1175  141 GLLNALLGALGLEpinwlgdPSLALPAVIIVTVWKGTGFNMLIFLAGLQSIPRELYEAARIDGASPWQRFRRITLPLLRP 220

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 489002997 196 ALLAGIALSFTRSLGEFGAV-IFIAGNIAWKTEVTSLMIFIR-LQEFDYPAASAIASVI 252
Cdd:COG1175  221 TILFVLVLSTIGALQVFDLVyVLTGGGPGNSTTTLVLYIYQTaFQQFDFGYASAIAVVL 279
PRK15050 PRK15050
2-aminoethylphosphonate transport system permease PhnU; Provisional
 42-251 3.42e-19

2-aminoethylphosphonate transport system permease PhnU; Provisional


Pssm-ID: 237888 [Multi-domain]  Cd Length: 296  Bit Score: 85.06  E-value: 3.42e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997  42 MSWAQYWDVITNPQVVAAYKVTLLSAFVASIFNGVFGLLMAWILTRYRFPGRTLLDALMDLPFALPTAVAGLTLASLF-- 119
Cdd:PRK15050  57 LGLATYRAVLGSPDFRGALLTTLQIAFASTAGCLVLGVLLALVLAFVPFPGASLVGRFIDTFVAFPSFLITLAFTFLYgs 136

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997 120 --SVNGIYGEWLAKFD--IKVTYTWLGIAVAMAFTSIPFVVRTVQPVLEELGPEYEEAAETLGATRWQSFRKVVLPELSP 195
Cdd:PRK15050 137 agSVNIALQRLFGLEAppLDFLYSPGGVILAEITFYTPFVVRPLLAAFAQLDARQLEAAASLGASPWRVARRVILPEAWP 216

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 489002997 196 ALLAGIALSFTRSLGEFGAVIFIAGniawKTEVT-SLMIFIR-LQEFDYPAASAIASV 251
Cdd:PRK15050 217 ALAAGGSLCLLLTLNEFGIVLFTGA----KDVVTlPVLIYSKaIVDFDYPTACAIAVV 270
COG4132 COG4132
ABC-type uncharacterized transport system, permease component [General function prediction ...
 41-210 6.81e-17

ABC-type uncharacterized transport system, permease component [General function prediction only];


Pssm-ID: 443307 [Multi-domain]  Cd Length: 286  Bit Score: 78.31  E-value: 6.81e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997  41 QMSWAQYWDvITNPQVVAAYKVTLLSAFVASIFNGVFGLLMAWILTRyrFPGRTLLDALMdlPFALPTA-VAGLTLA--- 116
Cdd:COG4132   47 GFTLANYAE-LTSPFYLQAFWNSIWLSLASALIGAVIGLLLAYALRR--GGPGWLRRAVL--AFSGVASnFAGVPLAfaf 121

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997 117 -SLFSVNGIYGEWLAKFDIKVT-----YTWLGIAVAMAFTSIPFVVRTVQPVLEELGPEYEEAAETLGATRWQSFRKVVL 190
Cdd:COG4132  122 iATLGRNGLVTLLLKQLGIDLYdgfnlYSFWGLILVYLYFQIPLMVLLLYPALDGLRREWREAAALLGASRWQYWRRVAL 201

                        170       180
                 ....*....|....*....|
gi 489002997 191 PELSPALLAGIALSFTRSLG 210
Cdd:COG4132  202 PVLAPSLLGTFLLLFANAFG 221
ABC_perm1 NF038017
ABC transporter permease; Proteins of this family are the permease subunit of an ABC ...
 61-228 1.02e-16

ABC transporter permease; Proteins of this family are the permease subunit of an ABC transporter complex, which may be involved in tungstate uptake.


Pssm-ID: 411610 [Multi-domain]  Cd Length: 184  Bit Score: 76.05  E-value: 1.02e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997  61 KVTLLSAFVASIFNGVFGLLMAWiltrYRFPGRTLLDALMDLPFALPTAVAGLTLASLFSVNGIYGEWlakfdiKVTYTW 140
Cdd:NF038017   3 RVSGTATLIAALIGIPLGALLAL----RRFPGRRLVISLLNTLMGLPPVVVGLIVYLLLSRSGPLGFL------GLLYTP 72

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997 141 LGIAVAMAFTSIPFVVRTVQPVLEELGPEYEEAAETLGATRWQSFRkVVLPELSPALLAGIALSFTRSLGEFGAVIFIAG 220
Cdd:NF038017  73 TAMIIAQAVLALPIVAGLTLAAVQGLDPELRLQILSLGATRWQALW-TLLKEARFALLAAVLAGFGRAISEVGAVMMVGG 151


                 ....*...
gi 489002997 221 NIAWKTEV 228
Cdd:NF038017 152 NIRGYTRV 159
potC PRK09500
spermidine/putrescine ABC transporter membrane protein; Reviewed
 43-209 4.14e-16

spermidine/putrescine ABC transporter membrane protein; Reviewed


Pssm-ID: 236542 [Multi-domain]  Cd Length: 256  Bit Score: 75.79  E-value: 4.14e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997  43 SWAQYWDVITNPQVVAAYKVTLLSAFVASIFNGVFGLLMAWILTRYRFPGRTLLDALMDLPFALPTAVAGLTLASLFSVN 122
Cdd:PRK09500  42 TTKWYELLFNNDSLLQAAQHSLTMAVFSATFATLIGSLTAVALYRYRFRGKKFVSGMLFVVMMSPDIVMAISLLVLFMLL 121

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997 123 GIYGEWLAKFDIKVTYtwlgiavamaftSIPFVVRTVQPVLEELGPEYEEAAETLGATRWQSFRKVVLPELSPALLAGIA 202
Cdd:PRK09500 122 GIQLGFWSLLFAHITF------------CLPFVVVTVYSRLKGFDVRMLEAAKDLGASEFTILRKIILPLALPAVAAGWL 189


                 ....*..
gi 489002997 203 LSFTRSL 209
Cdd:PRK09500 190 LSFTLSL 196
UgpE COG0395
ABC-type glycerol-3-phosphate transport system, permease component [Carbohydrate transport and ...
 43-251 2.58e-14

ABC-type glycerol-3-phosphate transport system, permease component [Carbohydrate transport and metabolism];


Pssm-ID: 440164 [Multi-domain]  Cd Length: 282  Bit Score: 71.28  E-value: 2.58e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997  43 SWAQYWDVITNPQVVAAYKVTLLSAFVASIFNGVFGLLMAWILTRYRFPGRTLLDALMDLPFALPTAVAGLTLASLFSVN 122
Cdd:COG0395   59 TLENYRAAFTDGPFGRYLLNSLIVAVVSTVLSLLLSSLAAYALARFRFRGRKLLFLLILATLMIPGQVLLIPLYLLFRQL 138

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997 123 GIYGewlakfdikvtyTWLGIAVAMAFTSIPFVVRTVQPVLEELGPEYEEAAETLGATRWQSFRKVVLPELSPALLAGIA 202
Cdd:COG0395  139 GLLN------------TYWGLILPYLAFGLPFGIFLLRQFFRSIPRELEEAARIDGASEFRIFWRIVLPLSKPALATVAI 206

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|...
gi 489002997 203 LSFTRSLGEF-GAVIFIAGNiAWKTEVTSLMIFIRLQEFDYP---AASAIASV 251
Cdd:COG0395  207 FTFIGAWNDFlWPLILLTSP-DLRTLPVGLASFQGQYGTDWGllmAAAVIATL 258
BPD_transp_1 pfam00528
Binding-protein-dependent transport system inner membrane component; The alignments cover the ...
 76-274 1.00e-13

Binding-protein-dependent transport system inner membrane component; The alignments cover the most conserved region of the proteins, which is thought to be located in a cytoplasmic loop between two transmembrane domains. The members of this family have a variable number of transmembrane helices.


Pssm-ID: 334128 [Multi-domain]  Cd Length: 183  Bit Score: 67.71  E-value: 1.00e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997   76 VFGLLMAwilTRYRFPGRTLLDALMDLPFALPTAVAGLTLaslfsvngiygeWLAKFDIKVTYTWLGIAVAMAFTSIPFV 155
Cdd:pfam00528   3 PLGIIAA---LRRGRRLDRLLRPLIDLLQALPSFVLAILL------------VVIAILSILGHGILPAIILALLGWAGYA 67

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997  156 VRTVQPVLEELGPEYEEAAETLGATRWQSFRKVVLPELSPALLAGIALSFTRSLGEFGAVIFIAGNIAwktevTSLMIFI 235
Cdd:pfam00528  68 RLIRRAALRSLPSDLVEAARALGASRWQIFRKIILPNALPPILTGLALAFGGALGGAVLLEFLGSWPG-----LGLLLIE 142

                         170       180       190
                  ....*....|....*....|....*....|....*....
gi 489002997  236 RLQEFDYPAASAIASVILAASLLLLFSINTLQSRFGRRV 274
Cdd:pfam00528 143 AILGYDYPEIQGPVLAAALILLLLNLLVDILQRLLDPRV 181
thiP PRK09433
thiamine transporter membrane protein; Reviewed
 42-205 1.81e-12

thiamine transporter membrane protein; Reviewed


Pssm-ID: 181853 [Multi-domain]  Cd Length: 525  Bit Score: 66.78  E-value: 1.81e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997  42 MSWAQYWDVItnpqvvaayKVTLLSAFVASIFNGVFGLLMAWILTRYRFPGRTLLDALMDLPFALPTAVAGLTLASLFSV 121
Cdd:PRK09433  37 WQDSYLWHVL---------RFSFWQAFLSALLSVLPAIPLARALYRRRFPGRGLLLRLCAMTLVLPVLVAVFGLLSVYGR 107

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997 122 NGIYGEWLAKFDIKVT---YTWLGIAVAMAFTSIPFVVRTVQPVLEELGPEYEEAAETLGATRWQSFRKVVLPELSPALL 198
Cdd:PRK09433 108 SGWLAQLLQALGLEWPfsiYGLQGILLAHVFFNLPLATRLLLQALESIPAEQRQLAAQLGMRGWQFFRLVEWPYLRRQLP 187


                 ....*..
gi 489002997 199 AGIALSF 205
Cdd:PRK09433 188 PVAALIF 194
phosphate_pstC TIGR02138
phosphate ABC transporter, permease protein PstC; The typical operon for the high affinity ...
 44-223 2.86e-12

phosphate ABC transporter, permease protein PstC; The typical operon for the high affinity inorganic phosphate ABC transporter encodes an ATP-binding protein, a phosphate-binding protein, and two permease proteins. This family consists of one of the two permease proteins, PstC, which is homologous to PstA (TIGR00974). In the model bacterium Escherichia coli, this transport system is induced when the concentration of extrallular inorganic phosphate is low. A constitutive, lower affinity transporter operates otherwise. [Transport and binding proteins, Anions]


Pssm-ID: 273992 [Multi-domain]  Cd Length: 295  Bit Score: 65.37  E-value: 2.86e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997   44 WAQYWDVITNPQ-----VVAAYKVTLLSAFVASIFNGVFGLLMAWILTRYRFP-GRTLLDALMDLPFALPTAVAGL---- 113
Cdd:TIGR02138  44 TGTVWDPGSGPVqeqygALPLIVGTLITSLIALLIAVPVGIGIAIFLSEIAPKrVRSVLKPVVELLAGIPSVVYGFwglf 123

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997  114 TLASLFSvnGIYGEWLA---KFDIKVTYTWLGIAVAMAFTSIPFVVRTVQPVLEELGPEYEEAAETLGATRWQSFRKVVL 190
Cdd:TIGR02138 124 VLVPFLK--PHFQPFLGsnlGLIPLFGGPILTAGIVLAIMILPTIASISRDALRAVPRSYKEASYALGATKWETIRRVIL 201

                         170       180       190
                  ....*....|....*....|....*....|...
gi 489002997  191 PELSPALLAGIALSFTRSLGEFGAVIFIAGNIA 223
Cdd:TIGR02138 202 PAARSGIVGAVVLGLGRALGETMAVTMVIGNVF 234
PhnU2 TIGR03262
putative 2-aminoethylphosphonate ABC transporter, permease protein; [Transport and binding ...
 50-221 7.05e-12

putative 2-aminoethylphosphonate ABC transporter, permease protein; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 274495 [Multi-domain]  Cd Length: 546  Bit Score: 65.09  E-value: 7.05e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997   50 VITNPQVVAAYKVTLLSAFVASIFNGVFGLLMAWILTRYRFPGRTLLDALMDLPFALPTAVAGLTLASLFSVNGIYGEWL 129
Cdd:TIGR03262  46 YFATPGLLQSLGNSLTVSAIVTAIVVPLAFAFAYALTRSRIPGKGAFRLVALLPLLAPSLLPAISLIYLFGNQGLLKGLL 125

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997  130 AKFDIkvtYTWLGIAVAMAFTSIPFVVRTVQPVLEELGPEYEEAAETLGATRWQSFRKVVLPELSPALLAGIALSFTRSL 209
Cdd:TIGR03262 126 GGFSI---YGFWGIVIGEVFYTFPHALMILVTALSLADGRLYEAARAMGASPWRTFFTVTLPGAKYGLISAAFVVFTLVI 202

                         170
                  ....*....|..
gi 489002997  210 GEFGAVIFIAGN 221
Cdd:TIGR03262 203 TDFGVPKVIGGD 214
PstC COG0573
ABC-type phosphate transport system, permease component [Inorganic ion transport and ...
 63-223 2.16e-11

ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440338 [Multi-domain]  Cd Length: 303  Bit Score: 62.80  E-value: 2.16e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997  63 TLLSAFVASIFNGVFGLLMAWILTRY-RFPGRTLLDALMDLPFALPTAVAGL----TLASLFSVngiYGEWLAkfdikVT 137
Cdd:COG0573   82 TLLVSLIALLIAVPLGLGIAIFLSEYaPPRLRRILKPAIELLAGIPSVVYGFwglfVLVPLLRD---LFPWPP-----SG 153

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997 138 YTWLGIAVAMAFTSIPFVVRTVQPVLEELGPEYEEAAETLGATRWQSFRKVVLPELSPALLAGIALSFTRSLGEFGAVIF 217
Cdd:COG0573  154 FSLLTAGIVLAIMILPTITSLSRDALRAVPRSLREAALALGATRWETIRKVVLPAARSGIIAAVILGLGRALGETMAVLM 233


                 ....*.
gi 489002997 218 IAGNIA 223
Cdd:COG0573  234 VAGNAP 239
3a0107s02c TIGR00974
phosphate ABC transporter, permease protein PstA; This model describes PtsA, one of a pair of ...
 63-223 2.57e-11

phosphate ABC transporter, permease protein PstA; This model describes PtsA, one of a pair of permease proteins in the ABC (high affinity) phosphate transporter. In a number of species, this permease is fused with the PtsC protein (TIGR02138). In the model bacterium Escherichia coli, this transport system is induced when the concentration of extrallular inorganic phosphate is low. A constitutive, lower affinity transporter operates otherwise. [Transport and binding proteins, Anions]


Pssm-ID: 273373  Cd Length: 271  Bit Score: 62.25  E-value: 2.57e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997   63 TLLSAFVASIFNGVFGLLMAWILTRYRFPGRTL--LDALMDLPFALPTAVAGLTLASLFSVNGIYGewlakfdikvTYTW 140
Cdd:TIGR00974  59 TLLLTLLAIVIAVPLGIGAAIYLAEYANGSRFTkiIRFAVDILAGVPSIVVGLFGYGFFVLTYLGG----------GFSL 128

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997  141 LGIAVAMAFTSIPFVVRTVQPVLEELGPEYEEAAETLGATRWQSFRKVVLPELSPALLAGIALSFTRSLGEFGAVIFIAG 220
Cdd:TIGR00974 129 LAGALALALLILPVIIRTTEEALKAVPKDLREASLALGATKWQTIFKVVLPAALPGILTGIILSIARAAGETAPLLFTAG 208


                  ...
gi 489002997  221 NIA 223
Cdd:TIGR00974 209 GSA 211
PstA COG0581
ABC-type phosphate transport system, permease component [Inorganic ion transport and ...
 63-221 4.22e-11

ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440346 [Multi-domain]  Cd Length: 259  Bit Score: 61.59  E-value: 4.22e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997  63 TLLSAFVASIFNGVFGLLMAWILTRYRFPG------RTLLDALMdlpfALPTAVAGLTLASLFSVNgiygewlakfdIKV 136
Cdd:COG0581   46 TLLLVLLATLIAVPLGVLAAIYLAEYARGGrlarliRFAIDVLA----GVPSIVYGLFGYALFVLT-----------LGL 110

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997 137 TYTWLGIAVAMAFTSIPFVVRTVQPVLEELGPEYEEAAETLGATRWQSFRKVVLPELSPALLAGIALSFTRSLGEFGAVI 216
Cdd:COG0581  111 GFSLLAGALALALLMLPVVIRTTEEALRLVPNSLREASYALGATKWQTIRKVVLPAALPGILTGVILAIARAAGETAPLL 190


                 ....*
gi 489002997 217 FIAGN 221
Cdd:COG0581  191 FTAGV 195
thiP TIGR01253
thiamine ABC transporter, permease protein; The model describes thiamine ABC transporter, ...
 67-249 1.05e-10

thiamine ABC transporter, permease protein; The model describes thiamine ABC transporter, permease protein in bacteria. The protein belongs to the larger ABC transport system. It consists of atleast three components: the inner mebrane permease; thiamine binding protein; an ATP-binding subunit. It has been experimentally demonstrated that the mutants in the various steps in the de novo synthesis of the thiamine and the biologically active form, namely thiamine pyrophosphate can be exogenously supplemented with thiamine, thiamine monophosphate (TMP) or thiamine pyrophosphate (TPP). [Transport and binding proteins, Other]


Pssm-ID: 130320 [Multi-domain]  Cd Length: 519  Bit Score: 61.47  E-value: 1.05e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997   67 AFVASIFNGVFGLLMAWILTRYRFPGRTLLDALMDLPFALPTAVAgltlasLFSVNGIYGE--WLAKFDIKVTYTWL--- 141
Cdd:TIGR01253  56 AFLSALLSIFFAIFLARALFRKPFLGKKALLKLCALTFILPALVA------IFGIIGIYGRqgWLATLANLFGLEWQfhi 129

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997  142 ----GIAVAMAFTSIPFVVRTVQPVLEELGPEYEEAAETLGATRWQSFRKVVLPELSPALLAGIALSFTRSLGEFGAVIF 217
Cdd:TIGR01253 130 yglqGILIAHLFFNIPLAAQLFLQALENIPGEQRQLAAQLGLQGWHFFKFVEWPVFRQQCLPTAALIFMLCFASFATVLS 209

                         170       180       190
                  ....*....|....*....|....*....|..
gi 489002997  218 IAGNIAWKTEVTSLMIFIrLQEFDYPAASAIA 249
Cdd:TIGR01253 210 LGGGPQATTIELAIYQAI-LFDFDLAKAALFA 240
PhnU2 TIGR03262
putative 2-aminoethylphosphonate ABC transporter, permease protein; [Transport and binding ...
 59-273 1.53e-09

putative 2-aminoethylphosphonate ABC transporter, permease protein; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 274495 [Multi-domain]  Cd Length: 546  Bit Score: 58.15  E-value: 1.53e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997   59 AYKVTLLSAFVASIFNGVFGLLMAWILTRYRFPG--RTLLDALMDLPFALPTAVAGLTLASLFS-----VNGIYGewlak 131
Cdd:TIGR03262 333 AYKNSLRLAATTALIGTILVFGGAYLIEKTRGFGllRGVLRFLAILPMAVPGLVLGLGYIFFFNaptnpLNGLYG----- 407

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997  132 fdikvTYTWLGIAVAMAFTSIPFVvrTVQPVLEELGPEYEEAAETLGATRWQSFRKVVLPELSPALLAGIALSFTRSLGE 211
Cdd:TIGR03262 408 -----TMALLVLCTVVHFYTVSHL--TAVTALKQIDSEFEAVSASLKVPFYKTFLRVTLPVCLPAILDIARYLFVNSMTT 480

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 489002997  212 FGAVIFIAGNiawKTEVTSLMIFIRLQEFDYPAASAIASVILAASLLLLFSINTLQSRFGRR 273
Cdd:TIGR03262 481 VSAVVFLYSP---DTKLASVAILNMDDAGDIAPAAAMATLIVLTSAVAKLLFALASRRLLRR 539
MalG COG3833
ABC-type maltose transport system, permease component MalG [Carbohydrate transport and ...
 40-212 3.58e-09

ABC-type maltose transport system, permease component MalG [Carbohydrate transport and metabolism];


Pssm-ID: 443045 [Multi-domain]  Cd Length: 282  Bit Score: 56.31  E-value: 3.58e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997  40 AQMSWAQYWDVITNPQVVAAYKVTLLSAFVASIFNGVFGLLMAWILTRYRFPGR-TLLDALMDLPFaLPTAVAGLTLASL 118
Cdd:COG3833   55 ENFTLENYKKLFTETPFLRWFLNSLIVAVVTAIISVFLAALAAYAFSRFRFKGRkAGLLALLLLQM-FPAFLALVALYLL 133

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997 119 FSVNGIYGewlakfdikvtyTWLGIAVAMAFTSIPFVVRTVQPVLEELGPEYEEAAETLGATRWQSFRKVVLPELSPALL 198
Cdd:COG3833  134 LSALGLLN------------TLLGLILVYLGGAIPFNTWLMKGYFDTIPKELDEAAKIDGASHFQIFFRIILPLAKPILA 201

                        170
                 ....*....|....
gi 489002997 199 AGIALSFTRSLGEF 212
Cdd:COG3833  202 VVALLSFIGPWNDF 215
potB PRK09497
spermidine/putrescine ABC transporter membrane protein; Reviewed
 67-249 1.09e-08

spermidine/putrescine ABC transporter membrane protein; Reviewed


Pssm-ID: 181910  Cd Length: 285  Bit Score: 54.69  E-value: 1.09e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997  67 AFVASIFNGVFGLLMAWILTRYRFPGRTLLDALMDLPFALPTAVAGLTLASLFSVNGIYGEWLAKFD-----IKVTYTWL 141
Cdd:PRK09497  72 ALIATLACLVLGYPFAWFLAKLPHKVRPLLLFLLIVPFWTNSLIRIYGLKIFLSTKGYLNEFLLWLGvidtpIRIMFTES 151

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997 142 GIAVAMAFTSIPFVVRTVQPVLEELGPEYEEAAETLGATRWQSFRKVVLPELSPALLAGIALSFTRSLGEF-------GA 214
Cdd:PRK09497 152 AVIIGLVYILLPFMVLPLYSSIEKLDKPLLEAARDLGANKLQTFIRIIIPLTMPGIIAGCLLVLLPAMGMFyvsdllgGA 231

                        170       180       190
                 ....*....|....*....|....*....|....*
gi 489002997 215 VIFIAGNIawkteVTSLMIFIRlqefDYPAASAIA 249
Cdd:PRK09497 232 KNLLIGNV-----IKSQFLNIR----DWPFGAATS 257
MetP COG2011
ABC-type methionine transport system, permease component [Amino acid transport and metabolism]; ...
 145-205 2.19e-08

ABC-type methionine transport system, permease component [Amino acid transport and metabolism];


Pssm-ID: 441614  Cd Length: 220  Bit Score: 53.14  E-value: 2.19e-08
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 489002997 145 VAMAFTSIPFVVRTVQPVLEELGPEYEEAAETLGATRWQSFRKVVLPELSPALLAGIALSF 205
Cdd:COG2011   97 VPLTIAAIPFFARLVENALREVDPGVIEAAQAMGASPWQIIFKVLLPEALPSLILGLTVTL 157
PRK10592 PRK10592
putrescine transporter subunit: membrane component of ABC superfamily; Provisional
 43-252 8.28e-08

putrescine transporter subunit: membrane component of ABC superfamily; Provisional


Pssm-ID: 182574  Cd Length: 281  Bit Score: 52.16  E-value: 8.28e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997  43 SWAQYW--DVITNPQVVAAYKVTLLSAFVASIFNGVFGLLMAWILTRY-RFPGRTLLDALMDLPFALPTAVAGLTLASLF 119
Cdd:PRK10592  46 GWSTRWygELFRDDAMMSAVGLSLTIAACAATAAAILGTIAAVVMVRFgRFRGSNGFAFMITAPLVMPDVITGLSLLLLF 125

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997 120 SVNGIYGEWLAKFDIkvtytwLGIAVAMAFTSIPFVVRTVQPVLEELGPEYEEAAETLGATRWQSFRKVVLPELSPALLA 199
Cdd:PRK10592 126 VALAHAIGWPADRGM------LTIWLAHVTFCTAYVAVVISSRLRELDRSIEEAAMDLGATPLKVFFVITLPMIMPAIIS 199

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|...
gi 489002997 200 GIALSFTRSLGEFGAVIFIAGNIAwktEVTSLMIFIRLQEFDYPAASAIASVI 252
Cdd:PRK10592 200 GWLLAFTLSLDDLVIASFVSGPGA---TTLPMLVFSSVRMGVNPEINALATLI 249
thiP PRK09433
thiamine transporter membrane protein; Reviewed
 45-215 1.51e-07

thiamine transporter membrane protein; Reviewed


Pssm-ID: 181853 [Multi-domain]  Cd Length: 525  Bit Score: 52.14  E-value: 1.51e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997  45 AQYWDVITNPQVVAAYKVTLLSAFVASIFNGVFGLLMAWILTRYRFPGRTLLDALMDLPFALPTAVAGLTLASlfsvngi 124
Cdd:PRK09433 306 ASLLRVLAQPALWQALWTSLRIALAAALLAVVLTMMLLWSSRELRLRQRKLAAQALELSGMLILAMPGIVLAT------- 378

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997 125 yGEWLAKFDIKVTYTWLGIAVAM--AFTSIPFVVRTVQPVLEELGPEYEEAAETLGATRWQSFRKVVLPELSPALLAGIA 202
Cdd:PRK09433 379 -GLFLLLRNTTDLPASALGIVILtnALMALPYALRVLEPPMRDIAARYGRLCQSLGIRGWSRLRLIELRALRRPLAQAFA 457

                        170
                 ....*....|...
gi 489002997 203 LSFTRSLGEFGAV 215
Cdd:PRK09433 458 FACALSLGDFGVI 470
DppC COG1173
ABC-type dipeptide/oligopeptide/nickel transport system, permease component [Amino acid ...
 55-220 2.27e-07

ABC-type dipeptide/oligopeptide/nickel transport system, permease component [Amino acid transport and metabolism, Inorganic ion transport and metabolism];


Pssm-ID: 440786 [Multi-domain]  Cd Length: 275  Bit Score: 50.88  E-value: 2.27e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997  55 QVVAAYKVTLLSAFVASIFNGVFGLLMAwILTRYrFPGR--TLLDALMDLPFALPTAVAGLTLASLFSVNgiygewlakf 132
Cdd:COG1173   73 RLLYGARISLLVGLLAVLIALVIGVLLG-LLAGY-FGGWvdAVLMRLVDVLLAFPSLLLAIALVAVLGPG---------- 140

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997 133 dikvtytWLGIAVAMAFTSIPFVVRTVQP-VLEELGPEYEEAAETLGATRWQSFRKVVLPELSPALLAGIALSFTrslge 211
Cdd:COG1173  141 -------LLNVILALGLTGWPGYARLVRAqVLSLREREYVEAARALGASPLRIIFRHILPNVLPPLIVQATLGIA----- 208


                 ....*....
gi 489002997 212 fGAVIFIAG 220
Cdd:COG1173  209 -SAILAEAG 216
TauC COG0600
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion ...
 44-209 5.11e-07

ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440365 [Multi-domain]  Cd Length: 254  Bit Score: 49.76  E-value: 5.11e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997  44 WAQYWDVITNPQVVAAYKVTLLSAFVASIFNGVFGLLMAWILTRYRFpGRTLLDALMDLPFALPTavagLTLASLFSVng 123
Cdd:COG0600   47 LAALVELLASGELWEHLLASLLRVLLGFALAALLGVPLGLLLGLSRL-LRRLLDPLLVFLRPIPP----LALAPLLIL-- 119

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997 124 iygeWLAkfdikvtYTWLGIAVAMAFTSIPFVVRTVQPVLEELGPEYEEAAETLGATRWQSFRKVVLPELSPALLAGIAL 203
Cdd:COG0600  120 ----WFG-------IGEASKIFVIFLGAFFPILLNTAAGVRSVDPELLELARSLGASRWQILRKVVLPAALPYIFTGLRI 188


                 ....*.
gi 489002997 204 SFTRSL 209
Cdd:COG0600  189 ALGLAW 194
YnjC COG4135
ABC-type uncharacterized transport system YnjBCD, permease component [General function ...
 42-220 1.23e-05

ABC-type uncharacterized transport system YnjBCD, permease component [General function prediction only];


Pssm-ID: 443310 [Multi-domain]  Cd Length: 564  Bit Score: 46.40  E-value: 1.23e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997  42 MSWAQYWDVITNPqvvaaYKVTLLSAFVASIFNGVFGLLMAWILTRYRFPGRTLLDALMDLPFALPTavagltLASLFsv 121
Cdd:COG4135  345 RFWQRAAPGLLEP-----LGNTLLLALASALIALVLVLACLEAEARRGRRPGRRALWLLYLPLLVPQ------IAFLF-- 411

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997 122 nGIYGEWLAkfdIKVTYTWLGIAVAMAFTSIPFVVRTVQPVLEELGPEYEEAAETLGATRWQSFRKVVLPELSPALLAGI 201
Cdd:COG4135  412 -GLQVLLLR---LGLDGTWLAVIWAHLVFVLPYVFLSLAGPWRALDPRYAQVAASLGASPWRVFWRVKLPLLLRPILTAA 487

                        170
                 ....*....|....*....
gi 489002997 202 ALSFTRSLGEFGAVIFIAG 220
Cdd:COG4135  488 AVGFAVSVAQYLPTLLIGA 506
PRK10683 PRK10683
putrescine transporter subunit: membrane component of ABC superfamily; Provisional
 42-252 2.06e-05

putrescine transporter subunit: membrane component of ABC superfamily; Provisional


Pssm-ID: 182646  Cd Length: 317  Bit Score: 45.09  E-value: 2.06e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997  42 MSWAQYWDVITNPQVVAAYKVTLLSAFVASIFNGVFGLLMAWILTRYRFPGRTLLDALMDLPFALPTAVAGLTLASLFSV 121
Cdd:PRK10683  81 LNLGNFLQLTDDPLYFDAYLQSLQVAAISTLCCLLIGYPLAWAVAHSKPSTRNILLLLVILPSWTSFLIRVYAWMGILKN 160

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997 122 NGIYGE---WLAKFD--IKVTYTWLGIAVAMAFTSIPFVVRTVQPVLEELGPEYEEAAETLGATRWQSFRKVVLPELSPA 196
Cdd:PRK10683 161 NGVLNNfllWLGVIDqpLTILHTNLAVYIGIVYAYLPFMVLPIYTALTRIDYSLVEAALDLGARPLKTFFSVIVPLTKGG 240

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 489002997 197 LLAGIALSFTRSLGEFGAVIFIAGNiawktevTSLMI-FIRLQEF----DYPAASAIASVI 252
Cdd:PRK10683 241 IIAGSMLVFIPAVGEFVIPELLGGP-------DSIMIgRVLWQEFfnnrDWPVASAVAIIM 294
pstC PRK11275
phosphate ABC transporter permease PstC;
141-221 5.89e-05

phosphate ABC transporter permease PstC;


Pssm-ID: 183070  Cd Length: 319  Bit Score: 43.92  E-value: 5.89e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997 141 LGIAVAMAFTSIPFVVRTVQPVLEELGPEYEEAAETLGATRWQSFRKVVLPELSPALLAGIALSFTRSLGEFGAVIFIAG 220
Cdd:PRK11275 171 LAAGVILAIMIIPYIAAVMRDVFEQTPVMMKESAYGIGCTTWEVIWRIVLPFTKNGVIGGVMLGLGRALGETMAVTFIIG 250


                 .
gi 489002997 221 N 221
Cdd:PRK11275 251 N 251
PRK10782 PRK10782
D-methionine ABC transporter permease MetI;
63-198 5.18e-04

D-methionine ABC transporter permease MetI;


Pssm-ID: 182726  Cd Length: 217  Bit Score: 40.49  E-value: 5.18e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997  63 TLLSAFVASIFNGVFGLLMAWILTRYRfPGRTLLDALMdlpFALPTAVAGLTLASLFSvngIYGEWLAKFDIKVTYTWLG 142
Cdd:PRK10782  16 TLAMTFVSGFFGFVIGLPVGVLLYVTR-PGQIIANAKL---YRTLSALVNIFRSIPFI---ILLVWMIPFTRVIVGTSIG 88

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 489002997 143 IAVAMAFTSI---PFVVRTVQPVLEELGPEYEEAAETLGATRWQSFRKVVLPELSPALL 198
Cdd:PRK10782  89 LQAAIVPLTVgaaPFIARMVENALLEIPTGLIEASRAMGATPMQIVRKVLLPEALPGLV 147
malG PRK10998
maltose ABC transporter permease MalG;
67-212 5.68e-04

maltose ABC transporter permease MalG;


Pssm-ID: 182891  Cd Length: 296  Bit Score: 40.46  E-value: 5.68e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997  67 AFVASIFNGVFGLLMAWILTRYRFPGR-TLLDALMDLPFaLPTAVAGLTLASLFSVNGIYGEWLAkfdikvTYTWLGIAV 145
Cdd:PRK10998  92 AGITAIGIVALSTTCAYAFARMRFKGKaTLLKGMLIFQM-FPAVLSLVALYALFDRLGQYIPFIG------LNTHGGVIF 164

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 489002997 146 AMaFTSIPFVVRTVQPVLEELGPEYEEAAETLGATRWQSFRKVVLPELSPALLAGIALSFTRSLGEF 212
Cdd:PRK10998 165 AY-LGGIALHVWTIKGYFETIDSSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEV 230
thiP TIGR01253
thiamine ABC transporter, permease protein; The model describes thiamine ABC transporter, ...
 42-215 6.54e-04

thiamine ABC transporter, permease protein; The model describes thiamine ABC transporter, permease protein in bacteria. The protein belongs to the larger ABC transport system. It consists of atleast three components: the inner mebrane permease; thiamine binding protein; an ATP-binding subunit. It has been experimentally demonstrated that the mutants in the various steps in the de novo synthesis of the thiamine and the biologically active form, namely thiamine pyrophosphate can be exogenously supplemented with thiamine, thiamine monophosphate (TMP) or thiamine pyrophosphate (TPP). [Transport and binding proteins, Other]


Pssm-ID: 130320 [Multi-domain]  Cd Length: 519  Bit Score: 40.67  E-value: 6.54e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997   42 MSWAQYWDVITNPQVVAAYKVTLLSAFVASIFNGVFGLLMAWILTRYRFPGRTLLDALMDLPFALPTAVAGLTLASLFSV 121
Cdd:TIGR01253 307 LNSRNLLEVLANPQLWQALGTSLRIALAAALLALTLAIALLLLSRELEALHKMKAGQFIEMAGMLILAIPGIVLAMGFFL 386

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997  122 ngiygewLAKFDIKVTYTWLGIAV-AMAFTSIPFVVRTVQPVLEELGPEYEEAAETLGATRWQSFRKVVLPELSPALLAG 200
Cdd:TIGR01253 387 -------LLNDRDFLNIDADGIVIfCNALMAIPFALKILEAPFHDIMARYEMLCNSLGIEGWQRFKLIELKALKAPLAQA 459

                         170
                  ....*....|....*
gi 489002997  201 IALSFTRSLGEFGAV 215
Cdd:TIGR01253 460 FAFACALSIGDFGAI 474
pstA PRK11268
phosphate ABC transporter permease PstA;
140-232 1.16e-03

phosphate ABC transporter permease PstA;


Pssm-ID: 183065 [Multi-domain]  Cd Length: 295  Bit Score: 39.67  E-value: 1.16e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489002997 140 WLGIaVAMAFTSIPFVVRTVQPVLEELGPEYEEAAETLGATRWQSFRKVVLPELSPALLAGIALSFTRSLGEFGAVIFIA 219
Cdd:PRK11268 154 WAGV-IALALLQIPIVIRTTENMLKLVPDSLREAAYALGTPKWKMISAITLKASVSGIMTGVLLAIARIAGETAPLLFTA 232

                         90
                 ....*....|....
gi 489002997 220 -GNIAWKTEVTSLM 232
Cdd:PRK11268 233 lSNQFWSTDMMQPI 246
PhnE COG3639
ABC-type phosphate/phosphonate transport system, permease component [Inorganic ion transport ...
 144-199 4.75e-03

ABC-type phosphate/phosphonate transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 442856 [Multi-domain]  Cd Length: 244  Bit Score: 37.75  E-value: 4.75e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 489002997 144 AVAMAFTSIPFVVRTVQPVLEELGPEYEEAAETLGATRWQSFRKVVLPELSPALLA 199
Cdd:COG3639  123 VLALAIHTIGFLGKLFAEAIEEIDPGPVEALRATGASRLQVIRYGVLPQVLPQFLS 178
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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