|
Name |
Accession |
Description |
Interval |
E-value |
| PTS-IIBC-alpha |
TIGR02005 |
PTS system, alpha-glucoside-specific IIBC component; This model represents a family of fused ... |
2-524 |
0e+00 |
|
PTS system, alpha-glucoside-specific IIBC component; This model represents a family of fused PTS enzyme II B and C domains. A gene from Clostridium has been partially characterized as a maltose transporter, while genes from Fusobacterium and Klebsiella have been proposed to transport the five non-standard isomers of sucrose. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids]
Pssm-ID: 273925 [Multi-domain] Cd Length: 524 Bit Score: 849.49 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489012781 2 LSQIQRFGGAMFTPVLLFPFAGIVVGIAIMLRNPMFVGEaLTAPDSLFAQIVHIIEEGGWTVFRNMPLIFAVGLPIGLAK 81
Cdd:TIGR02005 1 MNAIQRFGGAMFVPVLLFAFAGIVVGFAILFKNPDIMGS-LADQNTFWYKFWSVIEEGGWTVFRQMPLIFVVGLPIGLAK 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489012781 82 QAQGRACLAVLVSFLTWNYFINAMGMTWGHFFGVDFSAEP-TAGSGLTMIAGIKTLDTSIIGAIVISGLVTALHNRYFDK 160
Cdd:TIGR02005 80 KAQGRACLAALMGYLTFNYFINAILTQWGSSFGVNFTQGVgVGVSGLTSIAGIKTLDTSIIGAIIISGIITYIHNRFFDK 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489012781 161 PLPVFLGIFQGSSFVVIVAFLAMIPCAWLTLLGWPKVQLGIESLQAFLRSAGALGVWVYIFLERILIPTGLHHFVYGPFI 240
Cdd:TIGR02005 160 RLPVFLGIFQGTTFVVTIAFFVMLPCAAITCLVWPKVQMGIGSLQAFLISSGYIGVWLYTFLERILIPTGLHHFIYGPFI 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489012781 241 FGPAVVEGGLQVYWAEHLQAFSQSTEPLKTLFPEGGFALHGNSKVFGSVGIALALYFTAAPENRVKVAGLLIPATLTAML 320
Cdd:TIGR02005 240 FGPAVVNHGIQAYWAQHLNEFAKSTKPLKELFPYGGFALHGNSKVFGCLGIALAMYATAPPENRKKVAGLLIPATLTAVV 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489012781 321 VGITEPLEFTFLFISPLLFAVHAVLAATMATVMYICGVVGNFGGGLLDQFLPqNWIPMFHHHASMMFIQIGIGLCFTALY 400
Cdd:TIGR02005 320 VGITEPLEFTFLFIAPYLFVVHAVLAASMATVMYAFGVVGNMGGGLIDFIAT-NWLPLFKNHWGTYVTQIIIGLCFTAIY 398
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489012781 401 FVVFRTLILRLNLKTPGRE--ESEIKLYSKADYQAARGKTTAAAAPETRLGQAAGFLQALGGADNIESINNCATRLRIAL 478
Cdd:TIGR02005 399 FLVFRFLILKFNIPTPGREdtEEEVKLYSKADYKAKKGDSVESKRASSGNDKAAYFLQALGGKENIKDVTNCATRLRISV 478
|
490 500 510 520
....*....|....*....|....*....|....*....|....*.
gi 489012781 479 VDMAKTQSDDVFKALGAHGVVRRGNGIQVIVGLHVPQVRDQLENLM 524
Cdd:TIGR02005 479 KDESKVLDDEVFKKAGAHGVVRSGKAIQVIVGLSVPQVREAFEQLV 524
|
|
| PRK10110 |
PRK10110 |
PTS maltose transporter subunit IICB; |
6-524 |
2.58e-75 |
|
PTS maltose transporter subunit IICB;
Pssm-ID: 182245 [Multi-domain] Cd Length: 530 Bit Score: 247.72 E-value: 2.58e-75
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489012781 6 QRFGGAMFTPVLLFPFAGIVVGIAIMLRNPMfVGEALTAPDSLFAQIVHI-IEEGGWTVFRNMPLIFAVGLPIGLAKQAQ 84
Cdd:PRK10110 16 QQLGKTFMLPVALLSFCGIMLGIGSSLSSHD-VITLIPFLGNPVLQAIFTwMSKIGSFAFSFLPVMFCIAIPLGLARENK 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489012781 85 GRACLAVLVSFLTWNYFINAMGMTWGHFFGVDFSAEPTAGsgLTMIAGIKTLDTSIIGAIVISGLVTALHNRYFDKPLPV 164
Cdd:PRK10110 95 GVAAFAGFVGYAVMNLAVNFWLTNKGILPTTDAAVLKANN--IQSILGIQSIDTGILGAVIAGIIVWMLHERFHNIRLPD 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489012781 165 FLGIFQGSSFVVIVAFLAMIPCAWLTLLGWPKVQLGIESLQAFLRSAGALGVWVYIFLERILIPTGLHHFVYGPFIFGPA 244
Cdd:PRK10110 173 ALAFFGGTRFVPIISSLVMGLVGLVIPLVWPIFAMGISGLGHMINSAGDFGPMLFGTGERLLLPFGLHHILVALIRFTDA 252
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489012781 245 ---------VVEGGLQVYWAEHLQAFSQSTEPLKTLFPEGGfalHGNSKVFGSVGIALALYFTAAPENRVKVAGLLIPAT 315
Cdd:PRK10110 253 ggtqevcgqTVSGALTIFQAQLSCPTTHGFSESATRFLSQG---KMPAFLGGLPGAALAMYHCARPENRHKIKGLLISGV 329
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489012781 316 LTAMLVGITEPLEFTFLFISPLLFAVHAVLAATMATVMYICGV-VGNFGGGLLDQFLpqnwIPMFHHHASMMFIQIGIGL 394
Cdd:PRK10110 330 IACVVGGTTEPLEFLFLFVAPVLYVIHALLTGLGFTVMSVLGVtIGNTDGNIIDFVV----FGILHGLSTKWYMVPVVAA 405
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489012781 395 CFTALYFVVFRTLILRLNLKTPGREESEIKLYSKAdyqaargkttAAAAPETRLGQAAGFLQALGGADNIESINNCATRL 474
Cdd:PRK10110 406 IWFVVYYVIFRFAITRFNLKTPGRDSEVASSIEKA----------VAGAPGKSGYNVPAILEALGGADNIVSLDNCITRL 475
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|.
gi 489012781 475 RIALVDMAKTqSDDVFKALGAHGVVR-RGNGIQVIVGLHVPQVRDQLENLM 524
Cdd:PRK10110 476 RLSVKDMSLV-DVQALKDNRAIGVVQlNQHNLQVVIGPQVQSVKDEMAGLM 525
|
|
| PtsG1 |
COG1263 |
Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific ... |
1-534 |
6.74e-72 |
|
Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific [Carbohydrate transport and metabolism];
Pssm-ID: 440875 [Multi-domain] Cd Length: 463 Bit Score: 236.76 E-value: 6.74e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489012781 1 MLSQIQRFGGAMFTPVLLFPFAGIVVGIAIMLRNPMFVGEAltapdSLFAQIVHIIEEGGWTVFRNMPLIFAVGLPIGLA 80
Cdd:COG1263 8 LFRFLQKIGGIFMPPIPVLPAAGLLLGLGALLTNPGLLGEG-----SFLSGTYQILNAAGDAVFYFLPLLFAIGAAKGFG 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489012781 81 kqaqGRACLAVLVSFLTWNYFINAMGmtwghffgvdfsaepTAGSGLTMIAGIKTL---DTSIIGAIvISGLVTALHNRY 157
Cdd:COG1263 83 ----GNPALAAVIGYLLVHPTLLNAY---------------AVAGGYISFLGIPTLigyQGGVFPGI-LAGWLAAYLEKF 142
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489012781 158 FDKPLPVFLGIFqgssFVVIVAFLAMIPCAwLTLLG--WPKVQLGI-ESLQAFLRSAGALGVWVYIFLERILIPTGLHHF 234
Cdd:COG1263 143 LKKKLPDALGFF----FVPILTLLIMVPLA-LLVIGpiWPPIGNGIaAGLGWIYGLAGAIGGFIYGFLYRLLVPTGLHHG 217
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489012781 235 VYGPFIFgpavvegglqvywaehlqafsqstePLKTLFPEGGFALHGnSKVFGSVGIALALYFTAAPenRVKVAGLLIPA 314
Cdd:COG1263 218 LNPIFWF-------------------------LLGGTGDDGLFPILA-AAMFGQPGAALAVYLKAKP--NKKVKGLAISA 269
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489012781 315 TLTAMLVGITEPLEFTFLFISPLLFAVHAVLAATMATVMYICGVVGN-FG-GGLLDqflpqnwIPMFHHHASMMFIQIGI 392
Cdd:COG1263 270 ALTAFLTGITEPAEFGFNLVAPKLFIAHAIGGGLGGAIAGLLGVKAFsFGvGGLID-------FPSILNPGATNLLLYLI 342
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489012781 393 GLCFTALYFVVFRTLIlrlnlktpGRE--ESEIKLYSKADYQAARGKTTAAAApetrlgqaagflqalGGADNIESINNC 470
Cdd:COG1263 343 GLVIAFVYYFVFTFLI--------GREdeEEEEKLATKADAKKEEAEAAAAAL---------------GGGGGLLLLEAD 399
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 489012781 471 ATRLRIALVDMAKTQSDDVFKALGAHGVVRRGNGIQVIVGLHVPQVRDQLENLMKDSLSTEHTT 534
Cdd:COG1263 400 ITVLLLTLVDVVIVVVKDVVKLAAAGAVVVGVGGVGAVGGVGGGGVVIVIVIIILVVVLEGLGE 463
|
|
| PTS_EIIC |
pfam02378 |
Phosphotransferase system, EIIC; The bacterial phosphoenolpyruvate: sugar phosphotransferase ... |
9-347 |
2.73e-52 |
|
Phosphotransferase system, EIIC; The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. The sugar-specific permease of the PTS consists of three domains (IIA, IIB and IIC). The IIC domain catalyzes the transfer of a phosphoryl group from IIB to the sugar substrate.
Pssm-ID: 367061 Cd Length: 315 Bit Score: 180.62 E-value: 2.73e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489012781 9 GGAMFTPVLLFPFAGIVVGIAIMLRNPMFVGEALTAPDSLFAqivHIIEEGGWTVFRNMPLIFAVGLPIGLAkQAQGRAC 88
Cdd:pfam02378 1 GDGFMPPIPLLIAGGILLGLGNLPNDTTGLPAGGFTGDSPLA---EILKQAGSAAFGILPILFAIGIAYGLA-GGDGVAG 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489012781 89 LAVLVSFLTWNYFInamgmtwghffGVDFSAEPTAGSGLTMIAGIKTLDTSIIGAIVISGLVTALHNRYFD---KPLPVF 165
Cdd:pfam02378 77 AAGLIGLLSFNLAA-----------AISVALTAAGLSGGGNILGIGLGATGVFGAIIPGLLAAYLYNRFEKnitIKLPDS 145
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489012781 166 LGIFQGSSFVVIV-AFLAMIPCAWLTLLGWPKVQLGIESLQAFLRSAG-ALGVWVYIFLERILIPTGLHHFVYGPFIF-- 241
Cdd:pfam02378 146 LPFFVGKRFVPIItGFVTLLVIGPVLGLIWPAIQGGLNALGLLLIIAGgILGGLIFGFLERLLWPFGLHGAFIAIFWFlp 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489012781 242 -GPAVVEGGLQVYWAEhlqafsqsteplktlfpeGGFALHGN-SKVFGSVGIALALYFTAAPENRVKVAGLLIPATLTAM 319
Cdd:pfam02378 226 iGGSNPIANQQAYGAG------------------AAHILTGGfDVMFGGPGATLALYAAAFLFKKSKVKKLLGSAALTPF 287
|
330 340
....*....|....*....|....*...
gi 489012781 320 LVGITEPLEFTFLFISPLLFAVHAVLAA 347
Cdd:pfam02378 288 LFGITEPLEFGFPFVLNPPFFIPAILAG 315
|
|
| PTS_IIB_glc |
cd00212 |
PTS_IIB, PTS system, glucose/sucrose specific IIB subunit. The bacterial phosphoenolpyruvate: ... |
450-524 |
4.17e-26 |
|
PTS_IIB, PTS system, glucose/sucrose specific IIB subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family is one of four structurally and functionally distinct group IIB PTS system cytoplasmic enzymes, necessary for the uptake of carbohydrates across the cytoplasmic membrane and their phosphorylation
Pssm-ID: 238130 [Multi-domain] Cd Length: 78 Bit Score: 101.46 E-value: 4.17e-26
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 489012781 450 QAAGFLQALGGADNIESINNCATRLRIALVDMAKTQSDDVFKALGAHGVVRRGNGIQVIVGLHVPQV-RDQLENLM 524
Cdd:cd00212 3 LAKDILEALGGKENIVSLDHCATRLRLTVKDESKVDEAALKKLGGVKGVVKNGGQYQVIIGPGVADVyKEAIKLLG 78
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| PTS-IIBC-alpha |
TIGR02005 |
PTS system, alpha-glucoside-specific IIBC component; This model represents a family of fused ... |
2-524 |
0e+00 |
|
PTS system, alpha-glucoside-specific IIBC component; This model represents a family of fused PTS enzyme II B and C domains. A gene from Clostridium has been partially characterized as a maltose transporter, while genes from Fusobacterium and Klebsiella have been proposed to transport the five non-standard isomers of sucrose. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids]
Pssm-ID: 273925 [Multi-domain] Cd Length: 524 Bit Score: 849.49 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489012781 2 LSQIQRFGGAMFTPVLLFPFAGIVVGIAIMLRNPMFVGEaLTAPDSLFAQIVHIIEEGGWTVFRNMPLIFAVGLPIGLAK 81
Cdd:TIGR02005 1 MNAIQRFGGAMFVPVLLFAFAGIVVGFAILFKNPDIMGS-LADQNTFWYKFWSVIEEGGWTVFRQMPLIFVVGLPIGLAK 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489012781 82 QAQGRACLAVLVSFLTWNYFINAMGMTWGHFFGVDFSAEP-TAGSGLTMIAGIKTLDTSIIGAIVISGLVTALHNRYFDK 160
Cdd:TIGR02005 80 KAQGRACLAALMGYLTFNYFINAILTQWGSSFGVNFTQGVgVGVSGLTSIAGIKTLDTSIIGAIIISGIITYIHNRFFDK 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489012781 161 PLPVFLGIFQGSSFVVIVAFLAMIPCAWLTLLGWPKVQLGIESLQAFLRSAGALGVWVYIFLERILIPTGLHHFVYGPFI 240
Cdd:TIGR02005 160 RLPVFLGIFQGTTFVVTIAFFVMLPCAAITCLVWPKVQMGIGSLQAFLISSGYIGVWLYTFLERILIPTGLHHFIYGPFI 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489012781 241 FGPAVVEGGLQVYWAEHLQAFSQSTEPLKTLFPEGGFALHGNSKVFGSVGIALALYFTAAPENRVKVAGLLIPATLTAML 320
Cdd:TIGR02005 240 FGPAVVNHGIQAYWAQHLNEFAKSTKPLKELFPYGGFALHGNSKVFGCLGIALAMYATAPPENRKKVAGLLIPATLTAVV 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489012781 321 VGITEPLEFTFLFISPLLFAVHAVLAATMATVMYICGVVGNFGGGLLDQFLPqNWIPMFHHHASMMFIQIGIGLCFTALY 400
Cdd:TIGR02005 320 VGITEPLEFTFLFIAPYLFVVHAVLAASMATVMYAFGVVGNMGGGLIDFIAT-NWLPLFKNHWGTYVTQIIIGLCFTAIY 398
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489012781 401 FVVFRTLILRLNLKTPGRE--ESEIKLYSKADYQAARGKTTAAAAPETRLGQAAGFLQALGGADNIESINNCATRLRIAL 478
Cdd:TIGR02005 399 FLVFRFLILKFNIPTPGREdtEEEVKLYSKADYKAKKGDSVESKRASSGNDKAAYFLQALGGKENIKDVTNCATRLRISV 478
|
490 500 510 520
....*....|....*....|....*....|....*....|....*.
gi 489012781 479 VDMAKTQSDDVFKALGAHGVVRRGNGIQVIVGLHVPQVRDQLENLM 524
Cdd:TIGR02005 479 KDESKVLDDEVFKKAGAHGVVRSGKAIQVIVGLSVPQVREAFEQLV 524
|
|
| pts-Glc |
TIGR00852 |
PTS system, maltose and glucose-specific subfamily, IIC component; The PTS Glucose-Glucoside ... |
60-358 |
1.58e-82 |
|
PTS system, maltose and glucose-specific subfamily, IIC component; The PTS Glucose-Glucoside (Glc) Family (TC 4.A.1) Bacterial PTS transporters transport and concomitantly phosphorylate their sugar substrates, and typically consist of multiple subunits or protein domains. The Glc family includes permeases specific for glucose, N-acetylglucosamine and a large variety of a- and b-glucosides. However, not all b-glucoside PTS permeases are in this class, as the cellobiose (Cel) b-glucoside PTS permease is in the Lac family (TC #4.A.3). These permeases show limited sequence similarity with members of the Fru family (TC #4.A.2). Several of the E. coli PTS permeases in the Glc family lack their own IIA domains and instead use the glucose IIA protein (IIAglc or Crr). Most of these permeases have the B and C domains linked together in a single polypeptide chain, and a cysteyl residue in the IIB domain is phosphorylated by direct phosphoryl transfer from IIAglc(his~P). Those permeases which lack a IIA domain include the maltose (Mal), arbutin-salicin-cellobiose (ASC), trehalose (Tre), putative glucoside (Glv) and sucrose (Scr) permeases of E. coli . Most, but not all Scr permeases of other bacteria also lack a IIA domain. This model is specific for the IIC domain of the Glc family PTS transporters. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids, Signal transduction, PTS]
Pssm-ID: 273299 Cd Length: 289 Bit Score: 258.79 E-value: 1.58e-82
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489012781 60 GWTVFRNMPLIFAVGLPIGLAKQAQGRACLAVLVSFLTWNYFINAMGMTWGHFFGVDFSAEPtagsgltmiagiktlDTS 139
Cdd:TIGR00852 1 GSAAFFFLPLLFAIGAAKGFGGNPYLGAALAGILVHPVLNNAMGVGAQAVGNFFGFEIAKVG---------------YTG 65
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489012781 140 IIGAIVISGLVTALHNRYFDKPLPVFLGIFQGSSFVVIVAFLAMIPCAWLTLLGWPKVqlGIESLQAFLRSAG-ALGVWV 218
Cdd:TIGR00852 66 VVGPIIVGAIALALHERFLDKKLPDVLGFFLGPRFVVIIAGFVAILLIGPLGRVWPPV--GISALLHWLYSAGgALGGAI 143
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489012781 219 YIFLERILIPTGLHHFVYGPFIF--GPAVVEGGLQVYWAEHLQAFSQSTEPLKTLFPEGGFALHG----NSKVFGSVGIA 292
Cdd:TIGR00852 144 FGFLYRLLVPTGLHHIFYAIFIQliAGGTVIGGGQVIPGDALANMAQGGAALAVFFTAGDAKFKSiglpAAFSAGLGITE 223
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 489012781 293 LALYFTAAPENRVKVAGLLIPATLTAMLVGITEPLEFTFLFISPLLFAVHAVLAATMATVMYICGV 358
Cdd:TIGR00852 224 PAMYGVALRERRPFVAGLIGSALLTAFLTGITEPLEFLFLFGAPGLYSIHAVLAGSIFTVAIGMGI 289
|
|
| PRK10110 |
PRK10110 |
PTS maltose transporter subunit IICB; |
6-524 |
2.58e-75 |
|
PTS maltose transporter subunit IICB;
Pssm-ID: 182245 [Multi-domain] Cd Length: 530 Bit Score: 247.72 E-value: 2.58e-75
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489012781 6 QRFGGAMFTPVLLFPFAGIVVGIAIMLRNPMfVGEALTAPDSLFAQIVHI-IEEGGWTVFRNMPLIFAVGLPIGLAKQAQ 84
Cdd:PRK10110 16 QQLGKTFMLPVALLSFCGIMLGIGSSLSSHD-VITLIPFLGNPVLQAIFTwMSKIGSFAFSFLPVMFCIAIPLGLARENK 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489012781 85 GRACLAVLVSFLTWNYFINAMGMTWGHFFGVDFSAEPTAGsgLTMIAGIKTLDTSIIGAIVISGLVTALHNRYFDKPLPV 164
Cdd:PRK10110 95 GVAAFAGFVGYAVMNLAVNFWLTNKGILPTTDAAVLKANN--IQSILGIQSIDTGILGAVIAGIIVWMLHERFHNIRLPD 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489012781 165 FLGIFQGSSFVVIVAFLAMIPCAWLTLLGWPKVQLGIESLQAFLRSAGALGVWVYIFLERILIPTGLHHFVYGPFIFGPA 244
Cdd:PRK10110 173 ALAFFGGTRFVPIISSLVMGLVGLVIPLVWPIFAMGISGLGHMINSAGDFGPMLFGTGERLLLPFGLHHILVALIRFTDA 252
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489012781 245 ---------VVEGGLQVYWAEHLQAFSQSTEPLKTLFPEGGfalHGNSKVFGSVGIALALYFTAAPENRVKVAGLLIPAT 315
Cdd:PRK10110 253 ggtqevcgqTVSGALTIFQAQLSCPTTHGFSESATRFLSQG---KMPAFLGGLPGAALAMYHCARPENRHKIKGLLISGV 329
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489012781 316 LTAMLVGITEPLEFTFLFISPLLFAVHAVLAATMATVMYICGV-VGNFGGGLLDQFLpqnwIPMFHHHASMMFIQIGIGL 394
Cdd:PRK10110 330 IACVVGGTTEPLEFLFLFVAPVLYVIHALLTGLGFTVMSVLGVtIGNTDGNIIDFVV----FGILHGLSTKWYMVPVVAA 405
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489012781 395 CFTALYFVVFRTLILRLNLKTPGREESEIKLYSKAdyqaargkttAAAAPETRLGQAAGFLQALGGADNIESINNCATRL 474
Cdd:PRK10110 406 IWFVVYYVIFRFAITRFNLKTPGRDSEVASSIEKA----------VAGAPGKSGYNVPAILEALGGADNIVSLDNCITRL 475
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|.
gi 489012781 475 RIALVDMAKTqSDDVFKALGAHGVVR-RGNGIQVIVGLHVPQVRDQLENLM 524
Cdd:PRK10110 476 RLSVKDMSLV-DVQALKDNRAIGVVQlNQHNLQVVIGPQVQSVKDEMAGLM 525
|
|
| PRK11089 |
PRK11089 |
PTS system glucose-specific transporter subunits IIBC; Provisional |
3-510 |
5.64e-74 |
|
PTS system glucose-specific transporter subunits IIBC; Provisional
Pssm-ID: 182955 [Multi-domain] Cd Length: 477 Bit Score: 242.70 E-value: 5.64e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489012781 3 SQIQRFGGAMFTPVLLFPFAGIVVGIAimlrnpmfvgealTAPDSLFAQIV-HIIEEGGWTVFRNMPLIFAVGLPIGLAK 81
Cdd:PRK11089 7 ANLQKVGKSLMLPVSVLPIAGILLGVG-------------SANFSWLPAVVsHVMAEAGGSVFANMPLIFAIGVALGFTN 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489012781 82 QaQGRACLAVLVSFLTWNYFINAMGMTWGHFFGVDfsaeptagsgltmIAGIKTLDTSIIGAIVISGLVTALHNRYFDKP 161
Cdd:PRK11089 74 N-DGVSALAAVVAYGIMVKTMAVVAPLVLHLPAEE-------------IAAKHLADTGVLGGIIAGAIAAYMFNRFYRIK 139
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489012781 162 LPVFLGIFQGSSFVVIVAFLAMIPCAWLTLLGWPKVQLGIESLQ---AFLRSAGALGVwvYIFLERILIPTGLHHFVYGP 238
Cdd:PRK11089 140 LPEYLGFFAGKRFVPIISGLAAIFTGVVLSFIWPPIGSAIQTFSqwaAYQNPVVAFGI--YGFVERSLVPFGLHHIWNVP 217
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489012781 239 FIF--------GPAVVEGGLQVYWAEHLQAFSQSteplktlfpeGGFALhgnsKVFGSVGIALALYFTAAPENRVKVAGL 310
Cdd:PRK11089 218 FQMqigeytnaAGQVFHGDIPRYMAGDPTAGKLS----------GGFLF----KMYGLPAAAIAIWHSAKPENRAKVGGI 283
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489012781 311 LIPATLTAMLVGITEPLEFTFLFISPLLFAVHAVLAATMATVMYICGVVG--NFGGGLLDqFLPQNwipmfhHHASMMFI 388
Cdd:PRK11089 284 MISAALTSFLTGITEPIEFSFMFVAPILYIIHAILAGLAFPICILLGMRDgtSFSHGLID-FIVLS------GNSSKLWL 356
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489012781 389 QIGIGLCFTALYFVVFRTLILRLNLKTPGREESEiklyskaDYQAARGKTTAAAApetrlgqaagFLQALGGADNIESIN 468
Cdd:PRK11089 357 FPIVGIGYAIVYYTIFRVLIKALDLKTPGREDET-------EDAKATGTSEMAPA----------LVAAFGGKENITNLD 419
|
490 500 510 520
....*....|....*....|....*....|....*....|..
gi 489012781 469 NCATRLRIALVDMAKTQSDDVfKALGAHGVVRRGNGIQVIVG 510
Cdd:PRK11089 420 ACITRLRVSVADVSKVDQAGL-KKLGAAGVVVAGSGVQAIFG 460
|
|
| PtsG1 |
COG1263 |
Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific ... |
1-534 |
6.74e-72 |
|
Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific [Carbohydrate transport and metabolism];
Pssm-ID: 440875 [Multi-domain] Cd Length: 463 Bit Score: 236.76 E-value: 6.74e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489012781 1 MLSQIQRFGGAMFTPVLLFPFAGIVVGIAIMLRNPMFVGEAltapdSLFAQIVHIIEEGGWTVFRNMPLIFAVGLPIGLA 80
Cdd:COG1263 8 LFRFLQKIGGIFMPPIPVLPAAGLLLGLGALLTNPGLLGEG-----SFLSGTYQILNAAGDAVFYFLPLLFAIGAAKGFG 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489012781 81 kqaqGRACLAVLVSFLTWNYFINAMGmtwghffgvdfsaepTAGSGLTMIAGIKTL---DTSIIGAIvISGLVTALHNRY 157
Cdd:COG1263 83 ----GNPALAAVIGYLLVHPTLLNAY---------------AVAGGYISFLGIPTLigyQGGVFPGI-LAGWLAAYLEKF 142
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489012781 158 FDKPLPVFLGIFqgssFVVIVAFLAMIPCAwLTLLG--WPKVQLGI-ESLQAFLRSAGALGVWVYIFLERILIPTGLHHF 234
Cdd:COG1263 143 LKKKLPDALGFF----FVPILTLLIMVPLA-LLVIGpiWPPIGNGIaAGLGWIYGLAGAIGGFIYGFLYRLLVPTGLHHG 217
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489012781 235 VYGPFIFgpavvegglqvywaehlqafsqstePLKTLFPEGGFALHGnSKVFGSVGIALALYFTAAPenRVKVAGLLIPA 314
Cdd:COG1263 218 LNPIFWF-------------------------LLGGTGDDGLFPILA-AAMFGQPGAALAVYLKAKP--NKKVKGLAISA 269
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489012781 315 TLTAMLVGITEPLEFTFLFISPLLFAVHAVLAATMATVMYICGVVGN-FG-GGLLDqflpqnwIPMFHHHASMMFIQIGI 392
Cdd:COG1263 270 ALTAFLTGITEPAEFGFNLVAPKLFIAHAIGGGLGGAIAGLLGVKAFsFGvGGLID-------FPSILNPGATNLLLYLI 342
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489012781 393 GLCFTALYFVVFRTLIlrlnlktpGRE--ESEIKLYSKADYQAARGKTTAAAApetrlgqaagflqalGGADNIESINNC 470
Cdd:COG1263 343 GLVIAFVYYFVFTFLI--------GREdeEEEEKLATKADAKKEEAEAAAAAL---------------GGGGGLLLLEAD 399
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 489012781 471 ATRLRIALVDMAKTQSDDVFKALGAHGVVRRGNGIQVIVGLHVPQVRDQLENLMKDSLSTEHTT 534
Cdd:COG1263 400 ITVLLLTLVDVVIVVVKDVVKLAAAGAVVVGVGGVGAVGGVGGGGVVIVIVIIILVVVLEGLGE 463
|
|
| PRK09702 |
PRK09702 |
PTS sugar transporter subunit IIB; |
378-539 |
6.00e-70 |
|
PTS sugar transporter subunit IIB;
Pssm-ID: 77355 [Multi-domain] Cd Length: 161 Bit Score: 221.51 E-value: 6.00e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489012781 378 MFHHHASMMFIQIGIGLCFTALYFVVFRTLILRLNLKTPGREESEIKLYSKADYQAARGKTTAAAaPETRLGQAAGFLQA 457
Cdd:PRK09702 1 MFSNHADMMLTQIAIGLCFTLLYFVVFRTLILQFNMCTPGREDAEVKLYSKAEYKASRGQTTAAE-PKKELDQAAGILQA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489012781 458 LGGADNIESINNCATRLRIALVDMAKTQSDDVFKALGAHGVVRRGNGIQVIVGLHVPQVRDQLENLMKDSLSTEHTTMTE 537
Cdd:PRK09702 80 LGGVGNISSINNCATRLRIALHDMSQTLDDEVFKKLGAHGVFRSGDAIQVIIGLHVSQLREQLDSLINSHQSAENVAITE 159
|
..
gi 489012781 538 AV 539
Cdd:PRK09702 160 AV 161
|
|
| PRK10255 |
PRK10255 |
PTS system N-acetyl glucosamine specific transporter subunits IIABC; Provisional |
1-524 |
6.79e-55 |
|
PTS system N-acetyl glucosamine specific transporter subunits IIABC; Provisional
Pssm-ID: 182338 [Multi-domain] Cd Length: 648 Bit Score: 195.86 E-value: 6.79e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489012781 1 MLSQIQRFGGAMFTPVLLFPFAgivvgiAIMLRnpmfvgeaLTAPDSLFaqiVHIIEEGGWTVFRNMPLIFAVGLPIGLA 80
Cdd:PRK10255 3 ILGFFQRLGRALQLPIAVLPVA------ALLLR--------FGQPDLLN---VAFIAQAGGAIFDNLALIFAIGVASSWS 65
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489012781 81 KQAQGRACLAVLVSfltwnYFINAMGMTwghffgvdfSAEPTAGSGLtmIAGIktldtsiigaivISGLVT-ALHNRYFD 159
Cdd:PRK10255 66 KDSAGAAALAGAVG-----YFVLTKAMV---------TINPEINMGV--LAGI------------ITGLVGgAAYNRWSD 117
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489012781 160 KPLPVFLGIFQGSSFVVI-VAFLAMIPCAWLTLLgWPKVQLGIESLQAFLRSAGALGVWVYIFLERILIPTGLHH----- 233
Cdd:PRK10255 118 IKLPDFLSFFGGKRFVPIaTGFFCLVLAAIFGYV-WPPVQHAIHAGGEWIVSAGALGSGIFGFINRLLIPTGLHQvlnti 196
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489012781 234 --FVYGPFIFGP-AVVEGGLQVYWAEHLQAfsqsteplkTLFPEGGFALhgnsKVFGSVGIALALYFTAAPENRVKVAGL 310
Cdd:PRK10255 197 awFQIGEFTNAAgTVFHGDINRFYAGDGTA---------GMFMSGFFPI----MMFGLPGAALAMYFAAPKERRPMVGGM 263
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489012781 311 LIPATLTAMLVGITEPLEFTFLFISPLLFAVHAVLAATMATVMYICGVVG--NFGGGLLDQFLPQNwIPMFHHHASMMFI 388
Cdd:PRK10255 264 LLSVAVTAFLTGVTEPLEFLFMFLAPLLYLLHALLTGISLFVATLLGIHAgfSFSAGAIDYALMYN-LPAASQNVWMLLV 342
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489012781 389 qigIGLCFTALYFVVFRTLILRLNLKTPGREEseiklysKADYQAARGKTTAAAAPETRLgqAAGFLQALGGADNIESIN 468
Cdd:PRK10255 343 ---MGVVFFAIYFVLFSAVIRMFNLKTPGRED-------KEDEIVTEEANSNTEEGLTQL--ATNYIAAVGGTDNLKAID 410
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*..
gi 489012781 469 NCATRLRIALVDMAKTqSDDVFKALGAHGVVR-RGNGIQVIVGLHVPQVRDQLENLM 524
Cdd:PRK10255 411 ACITRLRLTVADSARV-NDAMCKRLGASGVVKlNKQTIQVIVGAKAESIGDAMKKVV 466
|
|
| PTS_EIIC |
pfam02378 |
Phosphotransferase system, EIIC; The bacterial phosphoenolpyruvate: sugar phosphotransferase ... |
9-347 |
2.73e-52 |
|
Phosphotransferase system, EIIC; The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. The sugar-specific permease of the PTS consists of three domains (IIA, IIB and IIC). The IIC domain catalyzes the transfer of a phosphoryl group from IIB to the sugar substrate.
Pssm-ID: 367061 Cd Length: 315 Bit Score: 180.62 E-value: 2.73e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489012781 9 GGAMFTPVLLFPFAGIVVGIAIMLRNPMFVGEALTAPDSLFAqivHIIEEGGWTVFRNMPLIFAVGLPIGLAkQAQGRAC 88
Cdd:pfam02378 1 GDGFMPPIPLLIAGGILLGLGNLPNDTTGLPAGGFTGDSPLA---EILKQAGSAAFGILPILFAIGIAYGLA-GGDGVAG 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489012781 89 LAVLVSFLTWNYFInamgmtwghffGVDFSAEPTAGSGLTMIAGIKTLDTSIIGAIVISGLVTALHNRYFD---KPLPVF 165
Cdd:pfam02378 77 AAGLIGLLSFNLAA-----------AISVALTAAGLSGGGNILGIGLGATGVFGAIIPGLLAAYLYNRFEKnitIKLPDS 145
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489012781 166 LGIFQGSSFVVIV-AFLAMIPCAWLTLLGWPKVQLGIESLQAFLRSAG-ALGVWVYIFLERILIPTGLHHFVYGPFIF-- 241
Cdd:pfam02378 146 LPFFVGKRFVPIItGFVTLLVIGPVLGLIWPAIQGGLNALGLLLIIAGgILGGLIFGFLERLLWPFGLHGAFIAIFWFlp 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489012781 242 -GPAVVEGGLQVYWAEhlqafsqsteplktlfpeGGFALHGN-SKVFGSVGIALALYFTAAPENRVKVAGLLIPATLTAM 319
Cdd:pfam02378 226 iGGSNPIANQQAYGAG------------------AAHILTGGfDVMFGGPGATLALYAAAFLFKKSKVKKLLGSAALTPF 287
|
330 340
....*....|....*....|....*...
gi 489012781 320 LVGITEPLEFTFLFISPLLFAVHAVLAA 347
Cdd:pfam02378 288 LFGITEPLEFGFPFVLNPPFFIPAILAG 315
|
|
| PtsG2 |
COG1264 |
Phosphotransferase system IIB components [Carbohydrate transport and metabolism]; |
450-524 |
2.30e-27 |
|
Phosphotransferase system IIB components [Carbohydrate transport and metabolism];
Pssm-ID: 440876 [Multi-domain] Cd Length: 76 Bit Score: 104.82 E-value: 2.30e-27
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 489012781 450 QAAGFLQALGGADNIESINNCATRLRIALVDMAKTQsDDVFKALGAHGVVRRGNGIQVIVGLHVPQVRDQLENLM 524
Cdd:COG1264 3 LAKDILEALGGKENIVSVDHCATRLRVTVKDPSKVD-EAALKKLGVKGVVKNGGQVQVIIGPGVDKVADEIEKLL 76
|
|
| PTS_IIB_glc |
cd00212 |
PTS_IIB, PTS system, glucose/sucrose specific IIB subunit. The bacterial phosphoenolpyruvate: ... |
450-524 |
4.17e-26 |
|
PTS_IIB, PTS system, glucose/sucrose specific IIB subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family is one of four structurally and functionally distinct group IIB PTS system cytoplasmic enzymes, necessary for the uptake of carbohydrates across the cytoplasmic membrane and their phosphorylation
Pssm-ID: 238130 [Multi-domain] Cd Length: 78 Bit Score: 101.46 E-value: 4.17e-26
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 489012781 450 QAAGFLQALGGADNIESINNCATRLRIALVDMAKTQSDDVFKALGAHGVVRRGNGIQVIVGLHVPQV-RDQLENLM 524
Cdd:cd00212 3 LAKDILEALGGKENIVSLDHCATRLRLTVKDESKVDEAALKKLGGVKGVVKNGGQYQVIIGPGVADVyKEAIKLLG 78
|
|
| EIIB_glc |
TIGR00826 |
PTS system, glucose-like IIB component; The PTS Glucose-Glucoside (Glc) Family (TC 4.A.1) ... |
409-510 |
3.30e-24 |
|
PTS system, glucose-like IIB component; The PTS Glucose-Glucoside (Glc) Family (TC 4.A.1) Bacterial PTS transporters transport and concomitantly phosphorylate their sugar substrates, and typically consist of multiple subunits or protein domains. The Glc family includes permeases specific for glucose, N-acetylglucosamine and a large variety of a- and b-glucosides. However, not all b-glucoside PTS permeases are in this class, as the cellobiose (Cel) b-glucoside PTS permease is in the Lac family (TC #4.A.3). These permeases show limited sequence similarity with members of the Fru family (TC #4.A.2). Several of the E. coli PTS permeases in the Glc family lack their own IIA domains and instead use the glucose IIA protein (IIAglc or Crr). Most of these permeases have the B and C domains linked together in a single polypeptide chain, and a cysteyl residue in the IIB domain is phosphorylated by direct phosphoryl transfer from IIAglc(his~P). Those permeases which lack a IIA domain include the maltose (Mal), arbutin-salicin-cellobiose (ASC), trehalose (Tre), putative glucoside (Glv) and sucrose (Scr) permeases of E. coli . Most, but not all Scr permeases of other bacteria also lack a IIA domain. This model is specific for the IIB domain of the Glc family PTS transporters. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids, Signal transduction, PTS]
Pssm-ID: 273288 [Multi-domain] Cd Length: 88 Bit Score: 96.27 E-value: 3.30e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489012781 409 LRLNLKTPGREEseiklyskadyqaARGKTTAAAAPETRLGQAAGFLQALGGADNIESINNCATRLRIALVDMAKTQsDD 488
Cdd:TIGR00826 1 TRLRLKTPGREK-------------ADEEAIAAGEGVKGVFTAAGQIQALGGTGNVNKVDACITRLRVGVADVSKVD-DA 66
|
90 100
....*....|....*....|..
gi 489012781 489 VFKALGAHGVVRRGNGIQVIVG 510
Cdd:TIGR00826 67 VLKKLGAHGVNPLQRAVQVISG 88
|
|
| PTS_EIIB |
pfam00367 |
phosphotransferase system, EIIB; |
455-483 |
4.31e-11 |
|
phosphotransferase system, EIIB;
Pssm-ID: 459785 [Multi-domain] Cd Length: 32 Bit Score: 57.38 E-value: 4.31e-11
10 20
....*....|....*....|....*....
gi 489012781 455 LQALGGADNIESINNCATRLRIALVDMAK 483
Cdd:pfam00367 4 LEALGGKENIKSVDHCATRLRLTVKDESK 32
|
|
| PTS-II-ABC-beta |
TIGR01995 |
PTS system, beta-glucoside-specific IIABC component; This model represents a family of PTS ... |
451-532 |
5.62e-10 |
|
PTS system, beta-glucoside-specific IIABC component; This model represents a family of PTS enzyme II proteins in which all three domains are found in the same polypeptide chain and which appear to have a broad specificity for beta-glucosides including salicin (beta-D-glucose-1-salicylate) and arbutin (Hydroquinone-O-beta-D-glucopyranoside). These are distinct from the closely related sucrose-specific and trehalose-specific PTS transporters.
Pssm-ID: 273919 [Multi-domain] Cd Length: 610 Bit Score: 61.98 E-value: 5.62e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489012781 451 AAGFLQALGGADNIESINNCATRLRIALVDMAKTQSDDVFKALGAHGVVRRGNGIQVIVGLHVPQVRDQLENLMKDSLST 530
Cdd:TIGR01995 5 AKAIIENVGGKENIESVTHCATRLRFTLKDDAKADTEKLKKISGVITVVKSGGQYQVVIGNDVNDVYQALMDVLGLDDQA 84
|
..
gi 489012781 531 EH 532
Cdd:TIGR01995 85 ED 86
|
|
| PRK09796 |
PRK09796 |
PTS system cellobiose/arbutin/salicin-specific transporter subunits IIBC; Provisional |
457-531 |
5.33e-08 |
|
PTS system cellobiose/arbutin/salicin-specific transporter subunits IIBC; Provisional
Pssm-ID: 182081 Cd Length: 472 Bit Score: 55.19 E-value: 5.33e-08
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 489012781 457 ALGGADNIESINNCATRLRIALVDMAKTQSDDVFKALGAHGVVRRGNGIQVIVGLHVPQVRDQLENLMKDSLSTE 531
Cdd:PRK09796 15 ALGGVDNISAVTHCMTRLRFVIKDDALIDSPTLKTIPGVLGVVRSDNQCQVIIGNTVSQAFQEVVSLLPGDMQPA 89
|
|
| PRK09824 |
PRK09824 |
PTS system beta-glucoside-specific transporter subunits IIABC; Provisional |
451-516 |
6.47e-06 |
|
PTS system beta-glucoside-specific transporter subunits IIABC; Provisional
Pssm-ID: 236627 [Multi-domain] Cd Length: 627 Bit Score: 48.94 E-value: 6.47e-06
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 489012781 451 AAGFLQALGGADNIESINNCATRLRIALVDMAKTQSDDVFKALGAHGVVRRGNGIQVIVGLHVPQV 516
Cdd:PRK09824 7 AREIVAGVGGADNIVSLMHCATRLRFKLKDNSKAQAEVLKKNPGVIMVVESGGQFQVVIGNHVADV 72
|
|
| PTS-II-BC-sucr |
TIGR01996 |
PTS system, sucrose-specific IIBC component; This model represents the fused enzyme II B and C ... |
451-538 |
1.41e-05 |
|
PTS system, sucrose-specific IIBC component; This model represents the fused enzyme II B and C components of the sucrose-specific PTS sugar transporter system. Sucrose is converted to sucrose-6-phosphate in the process of translocation into the cell. Some of these transporters lack their own IIA domains and instead use the glucose IIA protein (IIAglc or Crr). The exceptions to this rule are Staphylococci, Streptococci, Lactococci, Lactobacilli, etc. which contain their own A domain as a C-terminal fusion. This family is closely related to the trehalose transporting PTS IIBC enzymes and the B and C domains of each are described by subfamily-domain level TIGRFAMs models (TIGR00826 and TIGR00852, respectively).
Pssm-ID: 131051 Cd Length: 461 Bit Score: 47.68 E-value: 1.41e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489012781 451 AAGFLQALGGADNIESINNCATRLRIALVDMAKTQSDDVFKALGAHGVVRRGNGIQVIVGL-HVPQVRDQLENLMKDSLS 529
Cdd:TIGR01996 6 AKEILELLGGKDNIVSVAHCATRLRLVLKDESKIDKKAIENLDGVKGTFFNSGQYQIIIGTgVVNKVYDEIVKLTGLSES 85
|
....*....
gi 489012781 530 TEHTTMTEA 538
Cdd:TIGR01996 86 STSEQKAEA 94
|
|
| murP |
PRK09586 |
PTS system N-acetylmuramic acid transporter subunits EIIBC; Reviewed |
455-537 |
2.98e-05 |
|
PTS system N-acetylmuramic acid transporter subunits EIIBC; Reviewed
Pssm-ID: 181971 [Multi-domain] Cd Length: 476 Bit Score: 46.59 E-value: 2.98e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489012781 455 LQALGGADNIESINNCATRLRIALVDMAKTQSDDVFKALGAHGVVRRGNGIQVIVGLHVPQVRDQLENLMKDSLSTEHTT 534
Cdd:PRK09586 13 LTRVGGPGNIASCGNCMTRLRLTLHDSSLVDPAAIKTIEGVKGVILSDDQVQVVLGPGKAQRAAKAMNELLGEAAAPVQD 92
|
...
gi 489012781 535 MTE 537
Cdd:PRK09586 93 LAE 95
|
|
| PRK14905 |
PRK14905 |
triosephosphate isomerase/PTS system glucose/sucrose-specific transporter subunit IIB; ... |
451-531 |
3.32e-05 |
|
triosephosphate isomerase/PTS system glucose/sucrose-specific transporter subunit IIB; Provisional
Pssm-ID: 184898 [Multi-domain] Cd Length: 355 Bit Score: 46.18 E-value: 3.32e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489012781 451 AAGFLQALGGADNIESINNCATRLRIALVDMAKTQSDDVFKALGAHGVVRRGNGIQVIVGlhvPQVRDQLENLMKDSLST 530
Cdd:PRK14905 278 AIQLIDHLGGKDNISALTHCASRIRVMLRNDGHIDKSAIEKIDCVKGLFSIANQYQIILG---AGIVEKIHEEMKALLAR 354
|
.
gi 489012781 531 E 531
Cdd:PRK14905 355 E 355
|
|
| |
