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Conserved domains on  [gi|489055527|ref|WP_002965677|]
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MULTISPECIES: NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta [Brucella]

Protein Classification

NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta( domain architecture ID 10003429)

NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta is part of a tetrameric membrane-bound proton pump (composed of two alpha and two beta subunits) that catalyzes the reversible transfer of a hydride ion equivalent between NAD and NADP

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PntB COG1282
NAD/NADP transhydrogenase beta subunit [Energy production and conversion];
1-464 0e+00

NAD/NADP transhydrogenase beta subunit [Energy production and conversion];


:

Pssm-ID: 440893  Cd Length: 458  Bit Score: 720.71  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489055527   1 MSVNLAAFLYLVSGVLFILALRGLSHPTTSRQGNMYGMIGMAISIVTTLLLarPSFGGLVLIIVGIAIGGGIGAVIARRI 80
Cdd:COG1282    1 MSNTLITLAYLVAAVLFILGLKGLSSPETARRGNLLGAVGMLIAVVATLLL--PGIVNYGLILAAIAIGGAIGAVLARKV 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489055527  81 AMTAMPQLVAAFHSLIGLAAVLVAAAALYSPHSFGigevGQIHGQALIEMSLGVAIGAITFTGSIIAFLKLDGRMSGKPI 160
Cdd:COG1282   79 EMTAMPQLVALFNGFGGLAAALVAAAELLEPGALA----GALPAIHLIEIVLGVLIGAVTFTGSLIAFGKLQGLISGKPI 154

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489055527 161 MLPGRHVI-NAALAAAIVLLIVVLTNTESHFVFWLIVLLSLVFGVLIIVPIGGADMPVVVSMLNSYSGWAAAGIGFTLGN 239
Cdd:COG1282  155 TFPGQHLLnLLLLLAIVALGVLFVVSPGSLLLLLLLTVLALLLGVLLVLPIGGADMPVVISLLNSYSGLAAAAAGFVLGN 234

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489055527 240 LALIITGALVGSSGAILSYIMCKGMNRSFISVILGGFGGDTSSAAGGEvEQRPVKQGSADDAAFILKNASKVIIVPGYGM 319
Cdd:COG1282  235 DLLIIAGALVGASGAILTYIMCKAMNRSLINVLFGGFGGGGAAAAGAA-EQGEVKEISAEDAAILLAYASSVIIVPGYGM 313

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489055527 320 AVAQAQHALREMADKLKAEGVEVKYAIHPVAGRMPGHMNVLLAEANVPYDEVFELEDINSEFATADVAFVIGANDVTNPA 399
Cdd:COG1282  314 AVAQAQHAVRELADLLEERGVEVKFAIHPVAGRMPGHMNVLLAEANVPYDQLLEMDEINPEFAQTDVALVIGANDVVNPA 393

                        410       420       430       440       450       460
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 489055527 400 AKTDPKSPIFGMPILDVDKAGTVLFIKRGMGSGYAGVENELFFRDNTMMLFADAKKMVESIVKAL 464
Cdd:COG1282  394 ARTDPGSPIYGMPILEVDKAKTVIVIKRSMGPGYAGVENPLFYKDNTRMLFGDAKKSVEELVKAL 458
 
Name Accession Description Interval E-value
PntB COG1282
NAD/NADP transhydrogenase beta subunit [Energy production and conversion];
1-464 0e+00

NAD/NADP transhydrogenase beta subunit [Energy production and conversion];


Pssm-ID: 440893  Cd Length: 458  Bit Score: 720.71  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489055527   1 MSVNLAAFLYLVSGVLFILALRGLSHPTTSRQGNMYGMIGMAISIVTTLLLarPSFGGLVLIIVGIAIGGGIGAVIARRI 80
Cdd:COG1282    1 MSNTLITLAYLVAAVLFILGLKGLSSPETARRGNLLGAVGMLIAVVATLLL--PGIVNYGLILAAIAIGGAIGAVLARKV 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489055527  81 AMTAMPQLVAAFHSLIGLAAVLVAAAALYSPHSFGigevGQIHGQALIEMSLGVAIGAITFTGSIIAFLKLDGRMSGKPI 160
Cdd:COG1282   79 EMTAMPQLVALFNGFGGLAAALVAAAELLEPGALA----GALPAIHLIEIVLGVLIGAVTFTGSLIAFGKLQGLISGKPI 154

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489055527 161 MLPGRHVI-NAALAAAIVLLIVVLTNTESHFVFWLIVLLSLVFGVLIIVPIGGADMPVVVSMLNSYSGWAAAGIGFTLGN 239
Cdd:COG1282  155 TFPGQHLLnLLLLLAIVALGVLFVVSPGSLLLLLLLTVLALLLGVLLVLPIGGADMPVVISLLNSYSGLAAAAAGFVLGN 234

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489055527 240 LALIITGALVGSSGAILSYIMCKGMNRSFISVILGGFGGDTSSAAGGEvEQRPVKQGSADDAAFILKNASKVIIVPGYGM 319
Cdd:COG1282  235 DLLIIAGALVGASGAILTYIMCKAMNRSLINVLFGGFGGGGAAAAGAA-EQGEVKEISAEDAAILLAYASSVIIVPGYGM 313

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489055527 320 AVAQAQHALREMADKLKAEGVEVKYAIHPVAGRMPGHMNVLLAEANVPYDEVFELEDINSEFATADVAFVIGANDVTNPA 399
Cdd:COG1282  314 AVAQAQHAVRELADLLEERGVEVKFAIHPVAGRMPGHMNVLLAEANVPYDQLLEMDEINPEFAQTDVALVIGANDVVNPA 393

                        410       420       430       440       450       460
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 489055527 400 AKTDPKSPIFGMPILDVDKAGTVLFIKRGMGSGYAGVENELFFRDNTMMLFADAKKMVESIVKAL 464
Cdd:COG1282  394 ARTDPGSPIYGMPILEVDKAKTVIVIKRSMGPGYAGVENPLFYKDNTRMLFGDAKKSVEELVKAL 458
PNTB pfam02233
NAD(P) transhydrogenase beta subunit; This family corresponds to the beta subunit of NADP ...
 8-463 0e+00

NAD(P) transhydrogenase beta subunit; This family corresponds to the beta subunit of NADP transhydrogenase in prokaryotes, and either the protein N- or C terminal in eukaryotes. The domain is often found in conjunction with pfam01262. Pyridine nucleotide transhydrogenase catalyzes the reduction of NAD+ to NADPH. A complete loss of activity occurs upon mutation of Gly314 in E. coli.


Pssm-ID: 460502  Cd Length: 454  Bit Score: 677.24  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489055527    8 FLYLVSGVLFILALRGLSHPTTSRQGNMYGMIGMAISIVTTLLLARPSF-GGLVLIIVGIAIGGGIGAVIARRIAMTAMP 86
Cdd:pfam02233   1 AAYLVAAVLFILGLKGLSSPKTARRGNLLGAIGMALAIVATLLLGALADsLPYGLILIAIAIGGVIGLYIARRVKMTAMP 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489055527   87 QLVAAFHSLIGLAAVLVAAAALYSPHSFGIGevgqIHGQALIEMSLGVAIGAITFTGSIIAFLKLDGRMSGKPIMLPGRH 166
Cdd:pfam02233  81 QLVALFHSLGGLAAVLVAIAEYLAPEAFGAG----ISAFHLVEIVLGVLIGAVTFTGSLIAFGKLQGLLSSKPLTLPGRH 156

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489055527  167 VINAALAAAIVLLIVVLTNTESHFVFWLIVLLSLVFGVLIIVPIGGADMPVVVSMLNSYSGWAAAGIGFTLGNLALIITG 246
Cdd:pfam02233 157 LLNLLLLLAIVVLGVLFVAAPSSPGLWLLTALALLLGVLLVLPIGGADMPVVISLLNSYSGWAAAAAGFVLGNPLLIIAG 236

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489055527  247 ALVGSSGAILSYIMCKGMNRSFISVILGGFGGDTSSAAGG-EVEQRPVKQGSADDAAFILKNASKVIIVPGYGMAVAQAQ 325
Cdd:pfam02233 237 ALVGASGAILTYIMCKAMNRSLTNVLFGGFGAAASAGAAGaAAADGEVKEISAEDAAELLAYASSVIIVPGYGMAVAQAQ 316

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489055527  326 HALREMADKLKAEGVEVKYAIHPVAGRMPGHMNVLLAEANVPYDEVFELEDINSEFATADVAFVIGANDVTNPAAKTDPK 405
Cdd:pfam02233 317 HAVAELADLLEERGVEVRFAIHPVAGRMPGHMNVLLAEADVPYDIVLEMDEINDDFADTDVALVIGANDVVNPAARTDPG 396

                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 489055527  406 SPIFGMPILDVDKAGTVLFIKRGMGSGYAGVENELFFRDNTMMLFADAKKMVESIVKA 463
Cdd:pfam02233 397 SPIYGMPILEVWKAKTVIVIKRSMGPGYAGVDNPLFYKDNTRMLFGDAKKSLEELVKA 454
pntB PRK09444
Re/Si-specific NAD(P)(+) transhydrogenase subunit beta;
1-464 0e+00

Re/Si-specific NAD(P)(+) transhydrogenase subunit beta;


Pssm-ID: 236520  Cd Length: 462  Bit Score: 518.89  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489055527   1 MSVNLAAFLYLVSGVLFILALRGLSHPTTSRQGNMYGMIGMAISIVTTLLlaRPSFGGLVLIIVGIAIGGGIGAVIARRI 80
Cdd:PRK09444   1 MSGGLVTAAYIVAAILFIFSLAGLSKHETSRQGNNFGIAGMAIALIATIF--GPDTGNVGWIIIAMVIGGAIGIRLAKKV 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489055527  81 AMTAMPQLVAAFHSLIGLAAVLVAAAALYSPHSFGIGEVGQIHgqaLIEMSLGVAIGAITFTGSIIAFLKLDGRMSGKPI 160
Cdd:PRK09444  79 EMTEMPELVAILHSFVGLAAVLVGFNSYLDHDAGMAPVLVNIH---LTEVFLGIFIGAVTFTGSIVAFGKLRGKISSKPL 155

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489055527 161 MLPGRHVINAALAAAIVLLIVVLTNTES--HFVFWLIV--LLSLVFGVLIIVPIGGADMPVVVSMLNSYSGWAAAGIGFT 236
Cdd:PRK09444 156 MLPHRHKLNLAALVVSFLLLIVFVRTDSvgLQVFALLLmtLIALAFGWHLVASIGGADMPVVVSMLNSYSGWAAAAAGFM 235

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489055527 237 LGNLALIITGALVGSSGAILSYIMCKGMNRSFISVILGGFGGDTSSAAGGEvEQRPVKQGSADDAAFILKNASKVIIVPG 316
Cdd:PRK09444 236 LSNDLLIVTGALVGSSGAILSYIMCKAMNRSFISVIAGGFGTDGSSTGDDE-EVGEHRETTAEEVAEMLKNSHSVIITPG 314

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489055527 317 YGMAVAQAQHALREMADKLKAEGVEVKYAIHPVAGRMPGHMNVLLAEANVPYDEVFELEDINSEFATADVAFVIGANDVT 396
Cdd:PRK09444 315 YGMAVAQAQYPVAEITEKLRARGINVRFGIHPVAGRLPGHMNVLLAEAKVPYDIVLEMDEINDDFADTDTVLVIGANDTV 394

                        410       420       430       440       450       460
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 489055527 397 NPAAKTDPKSPIFGMPILDVDKAGTVLFIKRGMGSGYAGVENELFFRDNTMMLFADAKKMVESIVKAL 464
Cdd:PRK09444 395 NPAAQEDPNSPIAGMPVLEVWKAQNVIVFKRSMNTGYAGVQNPLFFKENTQMLFGDAKASVDAILKAL 462
 
Name Accession Description Interval E-value
PntB COG1282
NAD/NADP transhydrogenase beta subunit [Energy production and conversion];
1-464 0e+00

NAD/NADP transhydrogenase beta subunit [Energy production and conversion];


Pssm-ID: 440893  Cd Length: 458  Bit Score: 720.71  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489055527   1 MSVNLAAFLYLVSGVLFILALRGLSHPTTSRQGNMYGMIGMAISIVTTLLLarPSFGGLVLIIVGIAIGGGIGAVIARRI 80
Cdd:COG1282    1 MSNTLITLAYLVAAVLFILGLKGLSSPETARRGNLLGAVGMLIAVVATLLL--PGIVNYGLILAAIAIGGAIGAVLARKV 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489055527  81 AMTAMPQLVAAFHSLIGLAAVLVAAAALYSPHSFGigevGQIHGQALIEMSLGVAIGAITFTGSIIAFLKLDGRMSGKPI 160
Cdd:COG1282   79 EMTAMPQLVALFNGFGGLAAALVAAAELLEPGALA----GALPAIHLIEIVLGVLIGAVTFTGSLIAFGKLQGLISGKPI 154

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489055527 161 MLPGRHVI-NAALAAAIVLLIVVLTNTESHFVFWLIVLLSLVFGVLIIVPIGGADMPVVVSMLNSYSGWAAAGIGFTLGN 239
Cdd:COG1282  155 TFPGQHLLnLLLLLAIVALGVLFVVSPGSLLLLLLLTVLALLLGVLLVLPIGGADMPVVISLLNSYSGLAAAAAGFVLGN 234

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489055527 240 LALIITGALVGSSGAILSYIMCKGMNRSFISVILGGFGGDTSSAAGGEvEQRPVKQGSADDAAFILKNASKVIIVPGYGM 319
Cdd:COG1282  235 DLLIIAGALVGASGAILTYIMCKAMNRSLINVLFGGFGGGGAAAAGAA-EQGEVKEISAEDAAILLAYASSVIIVPGYGM 313

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489055527 320 AVAQAQHALREMADKLKAEGVEVKYAIHPVAGRMPGHMNVLLAEANVPYDEVFELEDINSEFATADVAFVIGANDVTNPA 399
Cdd:COG1282  314 AVAQAQHAVRELADLLEERGVEVKFAIHPVAGRMPGHMNVLLAEANVPYDQLLEMDEINPEFAQTDVALVIGANDVVNPA 393

                        410       420       430       440       450       460
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 489055527 400 AKTDPKSPIFGMPILDVDKAGTVLFIKRGMGSGYAGVENELFFRDNTMMLFADAKKMVESIVKAL 464
Cdd:COG1282  394 ARTDPGSPIYGMPILEVDKAKTVIVIKRSMGPGYAGVENPLFYKDNTRMLFGDAKKSVEELVKAL 458
PNTB pfam02233
NAD(P) transhydrogenase beta subunit; This family corresponds to the beta subunit of NADP ...
 8-463 0e+00

NAD(P) transhydrogenase beta subunit; This family corresponds to the beta subunit of NADP transhydrogenase in prokaryotes, and either the protein N- or C terminal in eukaryotes. The domain is often found in conjunction with pfam01262. Pyridine nucleotide transhydrogenase catalyzes the reduction of NAD+ to NADPH. A complete loss of activity occurs upon mutation of Gly314 in E. coli.


Pssm-ID: 460502  Cd Length: 454  Bit Score: 677.24  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489055527    8 FLYLVSGVLFILALRGLSHPTTSRQGNMYGMIGMAISIVTTLLLARPSF-GGLVLIIVGIAIGGGIGAVIARRIAMTAMP 86
Cdd:pfam02233   1 AAYLVAAVLFILGLKGLSSPKTARRGNLLGAIGMALAIVATLLLGALADsLPYGLILIAIAIGGVIGLYIARRVKMTAMP 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489055527   87 QLVAAFHSLIGLAAVLVAAAALYSPHSFGIGevgqIHGQALIEMSLGVAIGAITFTGSIIAFLKLDGRMSGKPIMLPGRH 166
Cdd:pfam02233  81 QLVALFHSLGGLAAVLVAIAEYLAPEAFGAG----ISAFHLVEIVLGVLIGAVTFTGSLIAFGKLQGLLSSKPLTLPGRH 156

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489055527  167 VINAALAAAIVLLIVVLTNTESHFVFWLIVLLSLVFGVLIIVPIGGADMPVVVSMLNSYSGWAAAGIGFTLGNLALIITG 246
Cdd:pfam02233 157 LLNLLLLLAIVVLGVLFVAAPSSPGLWLLTALALLLGVLLVLPIGGADMPVVISLLNSYSGWAAAAAGFVLGNPLLIIAG 236

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489055527  247 ALVGSSGAILSYIMCKGMNRSFISVILGGFGGDTSSAAGG-EVEQRPVKQGSADDAAFILKNASKVIIVPGYGMAVAQAQ 325
Cdd:pfam02233 237 ALVGASGAILTYIMCKAMNRSLTNVLFGGFGAAASAGAAGaAAADGEVKEISAEDAAELLAYASSVIIVPGYGMAVAQAQ 316

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489055527  326 HALREMADKLKAEGVEVKYAIHPVAGRMPGHMNVLLAEANVPYDEVFELEDINSEFATADVAFVIGANDVTNPAAKTDPK 405
Cdd:pfam02233 317 HAVAELADLLEERGVEVRFAIHPVAGRMPGHMNVLLAEADVPYDIVLEMDEINDDFADTDVALVIGANDVVNPAARTDPG 396

                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 489055527  406 SPIFGMPILDVDKAGTVLFIKRGMGSGYAGVENELFFRDNTMMLFADAKKMVESIVKA 463
Cdd:pfam02233 397 SPIYGMPILEVWKAKTVIVIKRSMGPGYAGVDNPLFYKDNTRMLFGDAKKSLEELVKA 454
pntB PRK09444
Re/Si-specific NAD(P)(+) transhydrogenase subunit beta;
1-464 0e+00

Re/Si-specific NAD(P)(+) transhydrogenase subunit beta;


Pssm-ID: 236520  Cd Length: 462  Bit Score: 518.89  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489055527   1 MSVNLAAFLYLVSGVLFILALRGLSHPTTSRQGNMYGMIGMAISIVTTLLlaRPSFGGLVLIIVGIAIGGGIGAVIARRI 80
Cdd:PRK09444   1 MSGGLVTAAYIVAAILFIFSLAGLSKHETSRQGNNFGIAGMAIALIATIF--GPDTGNVGWIIIAMVIGGAIGIRLAKKV 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489055527  81 AMTAMPQLVAAFHSLIGLAAVLVAAAALYSPHSFGIGEVGQIHgqaLIEMSLGVAIGAITFTGSIIAFLKLDGRMSGKPI 160
Cdd:PRK09444  79 EMTEMPELVAILHSFVGLAAVLVGFNSYLDHDAGMAPVLVNIH---LTEVFLGIFIGAVTFTGSIVAFGKLRGKISSKPL 155

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489055527 161 MLPGRHVINAALAAAIVLLIVVLTNTES--HFVFWLIV--LLSLVFGVLIIVPIGGADMPVVVSMLNSYSGWAAAGIGFT 236
Cdd:PRK09444 156 MLPHRHKLNLAALVVSFLLLIVFVRTDSvgLQVFALLLmtLIALAFGWHLVASIGGADMPVVVSMLNSYSGWAAAAAGFM 235

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489055527 237 LGNLALIITGALVGSSGAILSYIMCKGMNRSFISVILGGFGGDTSSAAGGEvEQRPVKQGSADDAAFILKNASKVIIVPG 316
Cdd:PRK09444 236 LSNDLLIVTGALVGSSGAILSYIMCKAMNRSFISVIAGGFGTDGSSTGDDE-EVGEHRETTAEEVAEMLKNSHSVIITPG 314

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489055527 317 YGMAVAQAQHALREMADKLKAEGVEVKYAIHPVAGRMPGHMNVLLAEANVPYDEVFELEDINSEFATADVAFVIGANDVT 396
Cdd:PRK09444 315 YGMAVAQAQYPVAEITEKLRARGINVRFGIHPVAGRLPGHMNVLLAEAKVPYDIVLEMDEINDDFADTDTVLVIGANDTV 394

                        410       420       430       440       450       460
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 489055527 397 NPAAKTDPKSPIFGMPILDVDKAGTVLFIKRGMGSGYAGVENELFFRDNTMMLFADAKKMVESIVKAL 464
Cdd:PRK09444 395 NPAAQEDPNSPIAGMPVLEVWKAQNVIVFKRSMNTGYAGVQNPLFFKENTQMLFGDAKASVDAILKAL 462
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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