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Conserved domains on  [gi|489079319|ref|WP_002989257|]
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DUF1294 domain-containing protein [Streptococcus pyogenes]

Protein Classification

DUF1294 domain-containing protein( domain architecture ID 10007224)

DUF1294 domain-containing protein similar to Bacillus subtilis protein YsdA

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
YsdA COG3326
Uncharacterized membrane protein YsdA, DUF1294 family [Function unknown];
1-86 1.22e-11

Uncharacterized membrane protein YsdA, DUF1294 family [Function unknown];


:

Pssm-ID: 442555  Cd Length: 90  Bit Score: 55.16  E-value: 1.22e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489079319  1 MLLIWLGLLFVWNELVFVIYAFDKRKAIKKKRRISERNLLVITVLFGGFGALLAAKKYHHKTRKWYFVITWYTSILLTLL 80
Cdd:COG3326   3 LPLILLLYLLLINLLTFLLYGIDKRAARKGRWRIPEKTLLLLALLGGWPGALLGQQLFRHKTRKKSFRIGFWLIVLLNLA 82


                ....*.
gi 489079319 81 VTYIFM 86
Cdd:COG3326  83 LLAWLL 88
 
Name Accession Description Interval E-value
YsdA COG3326
Uncharacterized membrane protein YsdA, DUF1294 family [Function unknown];
1-86 1.22e-11

Uncharacterized membrane protein YsdA, DUF1294 family [Function unknown];


Pssm-ID: 442555  Cd Length: 90  Bit Score: 55.16  E-value: 1.22e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489079319  1 MLLIWLGLLFVWNELVFVIYAFDKRKAIKKKRRISERNLLVITVLFGGFGALLAAKKYHHKTRKWYFVITWYTSILLTLL 80
Cdd:COG3326   3 LPLILLLYLLLINLLTFLLYGIDKRAARKGRWRIPEKTLLLLALLGGWPGALLGQQLFRHKTRKKSFRIGFWLIVLLNLA 82


                ....*.
gi 489079319 81 VTYIFM 86
Cdd:COG3326  83 LLAWLL 88
DUF1294 pfam06961
Protein of unknown function (DUF1294); This family includes a number of hypothetical bacterial ...
 13-67 5.67e-08

Protein of unknown function (DUF1294); This family includes a number of hypothetical bacterial and archaeal proteins of unknown function.


Pssm-ID: 462051  Cd Length: 55  Bit Score: 44.65  E-value: 5.67e-08
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 489079319  13 NELVFVIYAFDKRKAIKKKRRISERNLLVITVLFGGFGALLAAKKYHHKTRKWYF 67
Cdd:pfam06961  1 NLITFILYGIDKRKARKGRWRIPEKTLLLLALLGGSPGALLGMRLFRHKTRKKSF 55
 
Name Accession Description Interval E-value
YsdA COG3326
Uncharacterized membrane protein YsdA, DUF1294 family [Function unknown];
1-86 1.22e-11

Uncharacterized membrane protein YsdA, DUF1294 family [Function unknown];


Pssm-ID: 442555  Cd Length: 90  Bit Score: 55.16  E-value: 1.22e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489079319  1 MLLIWLGLLFVWNELVFVIYAFDKRKAIKKKRRISERNLLVITVLFGGFGALLAAKKYHHKTRKWYFVITWYTSILLTLL 80
Cdd:COG3326   3 LPLILLLYLLLINLLTFLLYGIDKRAARKGRWRIPEKTLLLLALLGGWPGALLGQQLFRHKTRKKSFRIGFWLIVLLNLA 82


                ....*.
gi 489079319 81 VTYIFM 86
Cdd:COG3326  83 LLAWLL 88
DUF1294 pfam06961
Protein of unknown function (DUF1294); This family includes a number of hypothetical bacterial ...
 13-67 5.67e-08

Protein of unknown function (DUF1294); This family includes a number of hypothetical bacterial and archaeal proteins of unknown function.


Pssm-ID: 462051  Cd Length: 55  Bit Score: 44.65  E-value: 5.67e-08
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 489079319  13 NELVFVIYAFDKRKAIKKKRRISERNLLVITVLFGGFGALLAAKKYHHKTRKWYF 67
Cdd:pfam06961  1 NLITFILYGIDKRKARKGRWRIPEKTLLLLALLGGSPGALLGMRLFRHKTRKKSF 55
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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