NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|489121853|ref|WP_003031674|]
View 

MULTISPECIES: phosphate-starvation-inducible protein PsiE [Citrobacter]

Protein Classification

phosphate-starvation-inducible protein PsiE( domain architecture ID 10011847)

phosphate-starvation-inducible protein PsiE

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
PRK02833 PRK02833
phosphate-starvation-inducible protein PsiE; Provisional
 5-136 6.05e-47

phosphate-starvation-inducible protein PsiE; Provisional


:

Pssm-ID: 235075  Cd Length: 133  Bit Score: 148.06  E-value: 6.05e-47
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489121853   5 SRPRVEFISTILQTVLNLGLLSLGLILVVFLGKETLHLADVLFAP-EQTSKYELVEGLVVYFLYFEFIALIVKYFQSGFH 83
Cdd:PRK02833   1 SNKRFSKIAKLLQTILNIGLIILGIILVIFLFKETIHLAQLLFSPnSQTSSYKLLEEIVVFFLYFEFIALIVKYFKSGGH 80

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|...
gi 489121853  84 FPLRYFVYIGITAIVRLIIVDHKAPMDVLIYSAAILLLVITLWLCNSKRLKRE 136
Cdd:PRK02833  81 FPLRYFIYIGITAIIRLIIVDHESPMDTLLYAGAILLLVIALFLANSKRLKRE 133
 
Name Accession Description Interval E-value
PRK02833 PRK02833
phosphate-starvation-inducible protein PsiE; Provisional
 5-136 6.05e-47

phosphate-starvation-inducible protein PsiE; Provisional


Pssm-ID: 235075  Cd Length: 133  Bit Score: 148.06  E-value: 6.05e-47
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489121853   5 SRPRVEFISTILQTVLNLGLLSLGLILVVFLGKETLHLADVLFAP-EQTSKYELVEGLVVYFLYFEFIALIVKYFQSGFH 83
Cdd:PRK02833   1 SNKRFSKIAKLLQTILNIGLIILGIILVIFLFKETIHLAQLLFSPnSQTSSYKLLEEIVVFFLYFEFIALIVKYFKSGGH 80

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|...
gi 489121853  84 FPLRYFVYIGITAIVRLIIVDHKAPMDVLIYSAAILLLVITLWLCNSKRLKRE 136
Cdd:PRK02833  81 FPLRYFIYIGITAIIRLIIVDHESPMDTLLYAGAILLLVIALFLANSKRLKRE 133
PsiE COG3223
Phosphate starvation-inducible membrane PsiE (function unknown) [General function prediction ...
 3-136 1.66e-39

Phosphate starvation-inducible membrane PsiE (function unknown) [General function prediction only];


Pssm-ID: 442456  Cd Length: 130  Bit Score: 129.19  E-value: 1.66e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489121853   3 SLSRPRVEFISTILQTVLNLGLLSLGLILVVFLGKETLHLADVLfapeqTSKYELVEGLVVYFLYFEFIALIVKYFQSGF 82
Cdd:COG3223    2 KKHHKLDRLIAKLLQLILNIGLFVIGIALVIALAKETYEMVLLL-----SSGYVLLEDILLFFLYFEFIAMIVKYFKSGY 76

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....
gi 489121853  83 HFPLRYFVYIGITAIVRLIIVDHKAPMDVLIYSAAILLLVITLWLCNSKRLKRE 136
Cdd:COG3223   77 HFPLRYFIYIGITALIRLIIVDHKDPLDTLLLSGAILLLAIALLIVRYGRLKFP 130
PsiE pfam06146
Phosphate-starvation-inducible E family; This entry represents an integral membrane protein ...
 65-127 4.24e-11

Phosphate-starvation-inducible E family; This entry represents an integral membrane protein with 4 transmembrane helices. The second alpha helix contains a conserved glutamic acid residue and the third helix contains a conserved arginine residue. These two buried charged residues may interact. The type example for this family is the Phosphate-starvation-inducible E (PsiE) expression protein, which is under direct positive and negative control by PhoB and cAMP-CRP, respectively. The function of PsiE remains to be determined. This entry is sometimes found in proteins that contain other domains such as pfam11563.


Pssm-ID: 461838  Cd Length: 122  Bit Score: 55.95  E-value: 4.24e-11
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 489121853   65 FLYFEFIALIVKYFQSGfHFPLRYFVYIGITAIVRLIIV---DHKAPMDVLIYSAAILLLVITLWL 127
Cdd:pfam06146  52 LIALELLAMIVVYLRSG-RIPVRLVIYIAITALARKIIIldlKEVDPEELLALAAAILALGIAYWL 116
 
Name Accession Description Interval E-value
PRK02833 PRK02833
phosphate-starvation-inducible protein PsiE; Provisional
 5-136 6.05e-47

phosphate-starvation-inducible protein PsiE; Provisional


Pssm-ID: 235075  Cd Length: 133  Bit Score: 148.06  E-value: 6.05e-47
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489121853   5 SRPRVEFISTILQTVLNLGLLSLGLILVVFLGKETLHLADVLFAP-EQTSKYELVEGLVVYFLYFEFIALIVKYFQSGFH 83
Cdd:PRK02833   1 SNKRFSKIAKLLQTILNIGLIILGIILVIFLFKETIHLAQLLFSPnSQTSSYKLLEEIVVFFLYFEFIALIVKYFKSGGH 80

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|...
gi 489121853  84 FPLRYFVYIGITAIVRLIIVDHKAPMDVLIYSAAILLLVITLWLCNSKRLKRE 136
Cdd:PRK02833  81 FPLRYFIYIGITAIIRLIIVDHESPMDTLLYAGAILLLVIALFLANSKRLKRE 133
PsiE COG3223
Phosphate starvation-inducible membrane PsiE (function unknown) [General function prediction ...
 3-136 1.66e-39

Phosphate starvation-inducible membrane PsiE (function unknown) [General function prediction only];


Pssm-ID: 442456  Cd Length: 130  Bit Score: 129.19  E-value: 1.66e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489121853   3 SLSRPRVEFISTILQTVLNLGLLSLGLILVVFLGKETLHLADVLfapeqTSKYELVEGLVVYFLYFEFIALIVKYFQSGF 82
Cdd:COG3223    2 KKHHKLDRLIAKLLQLILNIGLFVIGIALVIALAKETYEMVLLL-----SSGYVLLEDILLFFLYFEFIAMIVKYFKSGY 76

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....
gi 489121853  83 HFPLRYFVYIGITAIVRLIIVDHKAPMDVLIYSAAILLLVITLWLCNSKRLKRE 136
Cdd:COG3223   77 HFPLRYFIYIGITALIRLIIVDHKDPLDTLLLSGAILLLAIALLIVRYGRLKFP 130
PsiE pfam06146
Phosphate-starvation-inducible E family; This entry represents an integral membrane protein ...
 65-127 4.24e-11

Phosphate-starvation-inducible E family; This entry represents an integral membrane protein with 4 transmembrane helices. The second alpha helix contains a conserved glutamic acid residue and the third helix contains a conserved arginine residue. These two buried charged residues may interact. The type example for this family is the Phosphate-starvation-inducible E (PsiE) expression protein, which is under direct positive and negative control by PhoB and cAMP-CRP, respectively. The function of PsiE remains to be determined. This entry is sometimes found in proteins that contain other domains such as pfam11563.


Pssm-ID: 461838  Cd Length: 122  Bit Score: 55.95  E-value: 4.24e-11
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 489121853   65 FLYFEFIALIVKYFQSGfHFPLRYFVYIGITAIVRLIIV---DHKAPMDVLIYSAAILLLVITLWL 127
Cdd:pfam06146  52 LIALELLAMIVVYLRSG-RIPVRLVIYIAITALARKIIIldlKEVDPEELLALAAAILALGIAYWL 116
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH