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Conserved domains on  [gi|489186229|ref|WP_003095647|]
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MULTISPECIES: DUF2065 domain-containing protein [Pseudomonas]

Protein Classification

DUF2065 domain-containing protein( domain architecture ID 10007113)

DUF2065 domain-containing protein similar to Escherichia coli YjeT

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
yjeT COG3242
Uncharacterized conserved protein YjeT, DUF2065 family [Function unknown];
1-61 2.28e-19

Uncharacterized conserved protein YjeT, DUF2065 family [Function unknown];


:

Pssm-ID: 442474  Cd Length: 62  Bit Score: 72.89  E-value: 2.28e-19
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 489186229  1 MWQEFGIAFCLVLVLEGILPFLCPRQWREAVTGIGRLSDRHLRLVGLGSMLLGTLLLYWIH 61
Cdd:COG3242   1 MMDDLLLALGLVLVIEGLLPFLFPGAWRRMLRQLAQLPDGQLRFIGLVSMVAGLVLLWLVR 61
 
Name Accession Description Interval E-value
yjeT COG3242
Uncharacterized conserved protein YjeT, DUF2065 family [Function unknown];
1-61 2.28e-19

Uncharacterized conserved protein YjeT, DUF2065 family [Function unknown];


Pssm-ID: 442474  Cd Length: 62  Bit Score: 72.89  E-value: 2.28e-19
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 489186229  1 MWQEFGIAFCLVLVLEGILPFLCPRQWREAVTGIGRLSDRHLRLVGLGSMLLGTLLLYWIH 61
Cdd:COG3242   1 MMDDLLLALGLVLVIEGLLPFLFPGAWRRMLRQLAQLPDGQLRFIGLVSMVAGLVLLWLVR 61
DUF2065 pfam09838
Uncharacterized protein conserved in bacteria (DUF2065); This domain, found in various ...
 5-60 2.05e-13

Uncharacterized protein conserved in bacteria (DUF2065); This domain, found in various prokaryotic proteins, has no known function.


Pssm-ID: 430868  Cd Length: 56  Bit Score: 57.47  E-value: 2.05e-13
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 489186229   5 FGIAFCLVLVLEGILPFLCPRQWREAVTGIGRLSDRHLRLVGLGSMLLGTLLLYWI 60
Cdd:pfam09838  1 LLLALGLVLVIEGLLPFLFPERWRRMLLQLAELPDGQLRIIGLVSMLLGLLLLWLV 56
 
Name Accession Description Interval E-value
yjeT COG3242
Uncharacterized conserved protein YjeT, DUF2065 family [Function unknown];
1-61 2.28e-19

Uncharacterized conserved protein YjeT, DUF2065 family [Function unknown];


Pssm-ID: 442474  Cd Length: 62  Bit Score: 72.89  E-value: 2.28e-19
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 489186229  1 MWQEFGIAFCLVLVLEGILPFLCPRQWREAVTGIGRLSDRHLRLVGLGSMLLGTLLLYWIH 61
Cdd:COG3242   1 MMDDLLLALGLVLVIEGLLPFLFPGAWRRMLRQLAQLPDGQLRFIGLVSMVAGLVLLWLVR 61
DUF2065 pfam09838
Uncharacterized protein conserved in bacteria (DUF2065); This domain, found in various ...
 5-60 2.05e-13

Uncharacterized protein conserved in bacteria (DUF2065); This domain, found in various prokaryotic proteins, has no known function.


Pssm-ID: 430868  Cd Length: 56  Bit Score: 57.47  E-value: 2.05e-13
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 489186229   5 FGIAFCLVLVLEGILPFLCPRQWREAVTGIGRLSDRHLRLVGLGSMLLGTLLLYWI 60
Cdd:pfam09838  1 LLLALGLVLVIEGLLPFLFPERWRRMLLQLAELPDGQLRIIGLVSMLLGLLLLWLV 56
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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