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Conserved domains on  [gi|489186479|ref|WP_003095893|]
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MULTISPECIES: twin-arginine translocase TatA/TatE family subunit [Pseudomonas]

Protein Classification

Sec-independent protein translocase subunit TatA( domain architecture ID 10011440)

Sec-independent protein translocase subunit TatA may form the protein-conducting channel of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
tatA PRK00442
twin-arginine translocase TatA/TatE family subunit;
1-82 5.89e-38

twin-arginine translocase TatA/TatE family subunit;


:

Pssm-ID: 234764  Cd Length: 92  Bit Score: 121.52  E-value: 5.89e-38
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489186479  1 MGIFDWKHWIVILIVVVLVFGTKRLKNLGSDVGEAIKGFRKAVNteEDDKKDQPAAQPA------------QPLNQPHTI 68
Cdd:PRK00442  1 MGIFDWKHWIVILVVVVLVFGTKKLKNLGSDVGESIKGFRKAMN--EDEKEDKPAEQPAppaqpvppvqntAPLNQPHTI 78

                        90
                ....*....|....
gi 489186479 69 DAQAQKVEEPARKD 82
Cdd:PRK00442 79 DGQAQKVEEPQRKD 92
 
Name Accession Description Interval E-value
tatA PRK00442
twin-arginine translocase TatA/TatE family subunit;
1-82 5.89e-38

twin-arginine translocase TatA/TatE family subunit;


Pssm-ID: 234764  Cd Length: 92  Bit Score: 121.52  E-value: 5.89e-38
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489186479  1 MGIFDWKHWIVILIVVVLVFGTKRLKNLGSDVGEAIKGFRKAVNteEDDKKDQPAAQPA------------QPLNQPHTI 68
Cdd:PRK00442  1 MGIFDWKHWIVILVVVVLVFGTKKLKNLGSDVGESIKGFRKAMN--EDEKEDKPAEQPAppaqpvppvqntAPLNQPHTI 78

                        90
                ....*....|....
gi 489186479 69 DAQAQKVEEPARKD 82
Cdd:PRK00442 79 DGQAQKVEEPQRKD 92
tatAE TIGR01411
twin arginine-targeting protein translocase, TatA/E family; This model distinguishes TatA/E ...
 4-49 5.99e-09

twin arginine-targeting protein translocase, TatA/E family; This model distinguishes TatA/E from the related TatB, but does not distinguish TatA from TatE. The Tat (twin-arginine translocation) system is a Sec-independent exporter for folded proteins, often with a redox cofactor already bound, across the bacterial inner membrane. Functionally equivalent systems are found in the chloroplast and some in archaeal species. The signal peptide recognized by the Tat system is modeled by TIGR01409. [Protein fate, Protein and peptide secretion and trafficking]


Pssm-ID: 273605 [Multi-domain]  Cd Length: 47  Bit Score: 46.83  E-value: 5.99e-09
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*.
gi 489186479   4 FDWKHWIVILIVVVLVFGTKRLKNLGSDVGEAIKGFRKAVNTEEDD 49
Cdd:TIGR01411  2 LSPPEWLIILVVILLLFGAKKLPELGRDLGKAIKEFKKALKEEEDE 47
TatA COG1826
Twin-arginine protein secretion pathway components TatA and TatB [Intracellular trafficking, ...
 17-60 4.30e-05

Twin-arginine protein secretion pathway components TatA and TatB [Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 441431 [Multi-domain]  Cd Length: 72  Bit Score: 37.61  E-value: 4.30e-05
                        10        20        30        40
                ....*....|....*....|....*....|....*....|....
gi 489186479 17 VLVFGTKRLKNLGSDVGEAIKGFRKAVNTEEDDKKDQPAAQPAQ 60
Cdd:COG1826  17 LLVFGPKKLPELARSLGKAIREFKKAANEVKEELDEELKEEELR 60
 
Name Accession Description Interval E-value
tatA PRK00442
twin-arginine translocase TatA/TatE family subunit;
1-82 5.89e-38

twin-arginine translocase TatA/TatE family subunit;


Pssm-ID: 234764  Cd Length: 92  Bit Score: 121.52  E-value: 5.89e-38
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489186479  1 MGIFDWKHWIVILIVVVLVFGTKRLKNLGSDVGEAIKGFRKAVNteEDDKKDQPAAQPA------------QPLNQPHTI 68
Cdd:PRK00442  1 MGIFDWKHWIVILVVVVLVFGTKKLKNLGSDVGESIKGFRKAMN--EDEKEDKPAEQPAppaqpvppvqntAPLNQPHTI 78

                        90
                ....*....|....
gi 489186479 69 DAQAQKVEEPARKD 82
Cdd:PRK00442 79 DGQAQKVEEPQRKD 92
tatA PRK02958
Sec-independent protein translocase subunit TatA;
20-72 1.12e-12

Sec-independent protein translocase subunit TatA;


Pssm-ID: 235091  Cd Length: 73  Bit Score: 56.90  E-value: 1.12e-12
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|...
gi 489186479 20 FGTKRLKNLGSDVGEAIKGFRKAVNTEEDDKkdqpaAQPAQPLNQPHTIDAQA 72
Cdd:PRK02958 20 FGTKKLRNIGSDLGGAVKGFKDGMKEGETPQ-----EAQAQQLPDSGTIDVEA 67
tatA PRK04598
twin-arginine translocase subunit TatA;
20-79 5.44e-10

twin-arginine translocase subunit TatA;


Pssm-ID: 179867  Cd Length: 81  Bit Score: 50.63  E-value: 5.44e-10
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 489186479 20 FGTKRLKNLGSDVGEAIKGFRKAVNTEEDDKKDQPAA--QPAQPLNQPHTIDAQAQKVEEPA 79
Cdd:PRK04598 20 FGTKKLRGIGSDLGSAVKGFKKAMSEEESAKANKKDAdfEPKNLEQAKTEAAAEKKKDKEQA 81
tatE PRK03625
twin-arginine translocase subunit TatE;
20-62 3.07e-09

twin-arginine translocase subunit TatE;


Pssm-ID: 179612  Cd Length: 67  Bit Score: 48.23  E-value: 3.07e-09
                        10        20        30        40
                ....*....|....*....|....*....|....*....|....
gi 489186479 20 FGTKRLKNLGSDVGEAIKGFRKAVNTEEDD-KKDQPAAQPAQPL 62
Cdd:PRK03625 20 FGTKKLRTLGGDLGAAIKGFKKAMNDDDAAaKKGADVDLQAEKL 63
tatAE TIGR01411
twin arginine-targeting protein translocase, TatA/E family; This model distinguishes TatA/E ...
 4-49 5.99e-09

twin arginine-targeting protein translocase, TatA/E family; This model distinguishes TatA/E from the related TatB, but does not distinguish TatA from TatE. The Tat (twin-arginine translocation) system is a Sec-independent exporter for folded proteins, often with a redox cofactor already bound, across the bacterial inner membrane. Functionally equivalent systems are found in the chloroplast and some in archaeal species. The signal peptide recognized by the Tat system is modeled by TIGR01409. [Protein fate, Protein and peptide secretion and trafficking]


Pssm-ID: 273605 [Multi-domain]  Cd Length: 47  Bit Score: 46.83  E-value: 5.99e-09
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*.
gi 489186479   4 FDWKHWIVILIVVVLVFGTKRLKNLGSDVGEAIKGFRKAVNTEEDD 49
Cdd:TIGR01411  2 LSPPEWLIILVVILLLFGAKKLPELGRDLGKAIKEFKKALKEEEDE 47
tatE PRK01614
Sec-independent protein translocase subunit TatA;
20-61 3.52e-08

Sec-independent protein translocase subunit TatA;


Pssm-ID: 234965  Cd Length: 85  Bit Score: 46.04  E-value: 3.52e-08
                        10        20        30        40
                ....*....|....*....|....*....|....*....|..
gi 489186479 20 FGTKRLKNLGSDVGEAIKGFRKAVNTEEDDKKDQPAAQPAQP 61
Cdd:PRK01614 20 FGTSKLRTLGADLGAALKGFKKAMRNDDEVSTSVLGETKMSA 61
tatA PRK01833
Sec-independent protein translocase subunit TatA;
20-52 3.88e-07

Sec-independent protein translocase subunit TatA;


Pssm-ID: 167284  Cd Length: 74  Bit Score: 42.94  E-value: 3.88e-07
                        10        20        30
                ....*....|....*....|....*....|...
gi 489186479 20 FGTKRLKNLGSDVGEAIKGFRKAVNteEDDKKD 52
Cdd:PRK01833 20 FGTKKLRTLGTDLGESVKGFKKAMA--DDKPKD 50
tatA PRK03554
Sec-independent protein translocase subunit TatA;
20-82 7.05e-07

Sec-independent protein translocase subunit TatA;


Pssm-ID: 179592  Cd Length: 89  Bit Score: 42.74  E-value: 7.05e-07
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 489186479 20 FGTKRLKNLGSDVGEAIKGFRKAVNteEDDKKDQPAAQPAQpLNQPHTIDAQAQKVEEPARKD 82
Cdd:PRK03554 20 FGTKKLGSIGSDLGASIKGFKKAMS--DDEPKQDKTSQDAD-FTAKTIADKQADTNQEQAKTE 79
tatA PRK04561
twin arginine translocase protein A; Provisional
 1-61 2.48e-05

twin arginine translocase protein A; Provisional


Pssm-ID: 179864  Cd Length: 75  Bit Score: 38.36  E-value: 2.48e-05
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 489186479  1 MGIFDWKHWIVILIVVVLVFGTKRLKNLGSDVGEAIKGFRKAVNTEE-------DDKKDQPAAQPAQP 61
Cdd:PRK04561  1 MGSFSIWHWLVVLVIVLLVFGTKRLTSGAKDLGSAVKEFKKGMHDDDkpagqlgDDSRSAEQAREAQA 68
TatA COG1826
Twin-arginine protein secretion pathway components TatA and TatB [Intracellular trafficking, ...
 17-60 4.30e-05

Twin-arginine protein secretion pathway components TatA and TatB [Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 441431 [Multi-domain]  Cd Length: 72  Bit Score: 37.61  E-value: 4.30e-05
                        10        20        30        40
                ....*....|....*....|....*....|....*....|....
gi 489186479 17 VLVFGTKRLKNLGSDVGEAIKGFRKAVNTEEDDKKDQPAAQPAQ 60
Cdd:COG1826  17 LLVFGPKKLPELARSLGKAIREFKKAANEVKEELDEELKEEELR 60
tatA PRK14857
TatA/E family twin arginine-targeting protein translocase;
17-78 5.00e-04

TatA/E family twin arginine-targeting protein translocase;


Pssm-ID: 184859  Cd Length: 90  Bit Score: 35.47  E-value: 5.00e-04
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489186479 17 VLVFGTKRLKNLGSDVGEAIKGFRKAVNtEEDDKKDQPAAQPAQPL--------NQPHTIDAQAQKVEEP 78
Cdd:PRK14857 19 LLVFGPKKLPEIGRSLGKTLKGFQEASK-EFENEIKREMAEPEQEVkapaelesNQTNEANQEQVDAENS 87
tatA PRK00720
twin-arginine translocase TatA/TatE family subunit;
1-82 1.24e-03

twin-arginine translocase TatA/TatE family subunit;


Pssm-ID: 234822  Cd Length: 78  Bit Score: 34.25  E-value: 1.24e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489186479  1 MGIFDWKHWIVILIVVVLVFGTKRLKNLGSDVGEAIKGFRKAVNTEeddkkDQPAAQPAQPlnqPHTIDAQAQKVEEPAR 80
Cdd:PRK00720  1 MGSFSIWHWLIVLAVVLLLFGRGKISELMGDVAKGIKSFKKGMADD-----DAPPAEPPEP---VRTIDHKADEPVAPVK 72


                ..
gi 489186479 81 KD 82
Cdd:PRK00720 73 KD 74
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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