|
Name |
Accession |
Description |
Interval |
E-value |
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
1-507 |
0e+00 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 644.18 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 1 MILPWLILIPFIGGFLCWIAEHSSKTLPRWIALLSMTLVLILSLWIWATGDFQLapapggePEWTLQFKVLWIERLGISI 80
Cdd:PRK05846 4 PLLSLLIFLPLIGGLLVLLTERFGARLARWIALIGTLLTLLLSLVLWIGFDSSN-------AGFQFVEKHPWIPRFGISY 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 81 HLAMDGLSLLMVALTGLLGVLSVLCSWNEIQRRIGFFHLNLLWILGGVIGVFLAIDLFLFFFFWEMMLVPMYFLIALWGh 160
Cdd:PRK05846 77 HLGVDGISLLLVVLTALLTPLAVLASWEEIKKRVKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLIGVWG- 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 161 ssddgKKTRIYAATKFFIFTQASGLVMLVAILGLVFVNFNATGviTFDYATLLKTQLSPHVEWLLMLGFFVAFAVKMPVV 240
Cdd:PRK05846 156 -----GKNRIYAATKFFLYTLLGSLLMLVAIIYLVVVYYNATG--TFDIADLLNLPLPPGVQYWLFLAFFIAFAVKMPMF 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 241 PVHSWLPDAHAQAPTAGSVDLAGILLKTAAYGLIRFALPLFPNASAEFAPIAMWLGIIGIFYGALLSFAQTDIKRLVAYS 320
Cdd:PRK05846 229 PLHTWLPDAHVQAPTAGSVLLAGILLKMGAYGLLRFSLPLFPDASHEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYS 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 321 SVSHMGFVMIGIYSGSQVALQGVVVQMIAHGLSAAALFILCGQLYERLHTRDMRKMGGLWSRMPYLPAISLFFASASLGL 400
Cdd:PRK05846 309 SISHMGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMASLGL 388
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 401 PGTGNFVGEFLILIGAFKVVPVIIVIATFGLVFASVYSLIMIHRAYFGPSQSDEP-ILGLDARELSMVLGLAVLLVLLGV 479
Cdd:PRK05846 389 PGTSGFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLYQRVMFGPVKNEVAkLKDLNGRELLILLPLVALLLLLGV 468
|
490 500
....*....|....*....|....*...
gi 489188289 480 YPQPVLDISAASMHGVQQWLGAALSTLA 507
Cdd:PRK05846 469 YPKPLLDVIHPSVENLLQWVAPSVATTR 496
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
1-501 |
0e+00 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 588.20 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 1 MILPWLILIPFIGGFLCWIAEHSSKTLPRWIALLSMTLVLILSLWIWATGDfqlapapGGEPEWTLQFKVLWIERLGISI 80
Cdd:COG1008 4 PLLSLLILLPLLGALLLLLLPRRNARLARWVALAVSLLTLLLSLYLLAGFD-------PGTGGFQFVESYPWIPSLGISY 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 81 HLAMDGLSLLMVALTGLLGVLSVLCSWNEIQRRIGFFHLNLLWILGGVIGVFLAIDLFLFFFFWEMMLVPMYFLIALWGH 160
Cdd:COG1008 77 HLGVDGISLPLVLLTALLTPLAILASWNEIKKRPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIWGG 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 161 ssddgkKTRIYAATKFFIFTQASGLVMLVAILGLVFVnfnaTGVITFDYATLLKTQLSPHVEWLLMLGFFVAFAVKMPVV 240
Cdd:COG1008 157 ------ERRIYAAIKFFLYTLAGSLLMLVAILALYFL----AGALTFDIAELAAAPLPLTAQLLLFLAFFIAFAVKVPMF 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 241 PVHSWLPDAHAQAPTAGSVDLAGILLKTAAYGLIRFALPLFPNASAEFAPIAMWLGIIGIFYGALLSFAQTDIKRLVAYS 320
Cdd:COG1008 227 PFHTWLPDAHVEAPTAGSVLLAGVLLKMGGYGLLRFALPLFPEASAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYS 306
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 321 SVSHMGFVMIGIYSGSQVALQGVVVQMIAHGLSAAALFILCGQLYERLHTRDMRKMGGLWSRMPYLPAISLFFASASLGL 400
Cdd:COG1008 307 SVSHMGFVLLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGL 386
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 401 PGTGNFVGEFLILIGAFKVVPVIIVIATFGLVFASVYSLIMIHRAYFGPSQSD-EPILGLDARELSMVLGLAVLLVLLGV 479
Cdd:COG1008 387 PGTSGFVGEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMYQRVFFGPLKEElAELPDLNPRELAVLAPLAALILLLGL 466
|
490 500
....*....|....*....|..
gi 489188289 480 YPQPVLDISAASMHGVQQWLGA 501
Cdd:COG1008 467 YPQPLLDLIEPSVEALLARVGA 488
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
3-499 |
0e+00 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 517.19 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 3 LPWLILIPFIGGFLCWIAEHSSKTLPRWIALLSMTLVLILSLWIWATGDFQlapapggEPEWTLQFKVLWIERLGISIHL 82
Cdd:TIGR01972 1 LSLLIFLPLIGALLILLLPSNKDGKARWIALVVALATLLLSLLLLFQFDPT-------GSGFQFTEDIPWIPALGISYHL 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 83 AMDGLSLLMVALTGLLGVLSVLCSWNEIQRRIGFFHLNLLWILGGVIGVFLAIDLFLFFFFWEMMLVPMYFLIALWGhss 162
Cdd:TIGR01972 74 GVDGISLLLVLLTALLTLLAILASWESIQKRVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVWG--- 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 163 ddgKKTRIYAATKFFIFTQASGLVMLVAILGLVFvnfnaTGVITFDYATLLKTQLSPHVEWLLMLGFFVAFAVKMPVVPV 242
Cdd:TIGR01972 151 ---GPNRIYAAMKFFLYTLAGSLLMLLAILGLYF-----LGGGTFDLLELLNLPLPFGVQTWLFLAFFIAFAVKVPLFPL 222
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 243 HSWLPDAHAQAPTAGSVDLAGILLKTAAYGLIRFALPLFPNASAEFAPIAMWLGIIGIFYGALLSFAQTDIKRLVAYSSV 322
Cdd:TIGR01972 223 HTWLPDAHVEAPTAGSVILAGVLLKMGTYGFLRFNLPLFPDASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSI 302
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 323 SHMGFVMIGIYSGSQVALQGVVVQMIAHGLSAAALFILCGQLYERLHTRDMRKMGGLWSRMPYLPAISLFFASASLGLPG 402
Cdd:TIGR01972 303 SHMGFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPG 382
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 403 TGNFVGEFLILIGAFKVVPVIIVIATFGLVFASVYSLIMIHRAYFGPSQSDEP--ILGLDARELSMVLGLAVLLVLLGVY 480
Cdd:TIGR01972 383 TSGFVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLYKRVFFGELSNPEVaeFPDLNGREIAVLAPLVVLILFLGLY 462
|
490
....*....|....*....
gi 489188289 481 PQPVLDISAASMHGVQQWL 499
Cdd:TIGR01972 463 PNPLLDLTEPSVNNLLSQV 481
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
27-507 |
1.71e-111 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 339.70 E-value: 1.71e-111
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 27 LPRWIALLSMTLVLILSLWI-WATGDFQlapapggEPEWTLQFKVLWIERLGISIHLAMDGLSLLMVALTGLLGVLSVLC 105
Cdd:PRK12561 6 TVRWYALGVGLADFALMCYVfWQHYDPS-------SSSLQLVERYAWLPQIGLEWSLGVDGLSMPLVLLSGLITTLSIFA 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 106 SWNeIQRRIGFFHLNLLWILGGVIGVFLAIDLFLFFFFWEMMLVPMYFLIALWGhssddGKKtRIYAATKFFIFTQASGL 185
Cdd:PRK12561 79 SWK-VTRKPRLFYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLLISIWG-----GQK-RLYAATKFILYTALASI 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 186 VMLVAILGLVFvnfnATGVITFDYATLLKTQLSPHVEWLLMLGFFVAFAVKMPVVPVHSWLPDAHAQAPTAGSVDLAGIL 265
Cdd:PRK12561 152 FILVAGLALAL----SGDTFTFDLAELGAKSYPLALELLLYAGFLIAFGVKLPIFPLHTWLPDAHGEASAPVSMILAGVL 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 266 LKTAAYGLIRFALPLFPNASAEFAPIAMWLGIIGIFYGALLSFAQTDIKRLVAYSSVSHMGFVMIGIYSGSQVALQGVVV 345
Cdd:PRK12561 228 LKMGGYALIRFNVQMLPDAHVYFAPALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVLLGIAAFTDLGISGAML 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 346 QMIAHGLSAAALFILCGQLYERLHTRDMRKMGGLWSRMPYLPAISLFFASASLGLPGTGNFVGEFLILIG---------A 416
Cdd:PRK12561 308 QMISHGLIAAALFFLTGVTYERTHTLSIPNMGGLAKVMPKTFALFTASSMASLALPGMSGFVSELTVFLGitssdvyssT 387
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 417 FKVvpVIIVIATFGLVFASVYSLIMIHRAYFGPSQSDEPILG----LDARELSMVLGLAVLLVLLGVYPQPVLDISAASM 492
Cdd:PRK12561 388 FRT--ITILLAAVGLILTPIYLLSMLRRVFYGPRSELLPALAvvedAKPRELFIALSLLVPIIGIGFYPKLATQLYDVKT 465
|
490
....*....|....*
gi 489188289 493 HGVQQWLGAALSTLA 507
Cdd:PRK12561 466 VALAAQLRQALPVIA 480
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
4-507 |
1.21e-96 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 302.01 E-value: 1.21e-96
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 4 PWL---ILIPFIGGFLC-WIAEHSSKTLPRWIALLSMTLVLILSLWIWATG-DFqlapapgGEPEWTLQFKVLWIERLGI 78
Cdd:PRK02546 7 PWLttiILFPIVAALLIpFIPDKGDGKTVRWYALIVGLIDFLITVYAFYTGyDF-------SNPGLQLVESYSWLPQLGL 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 79 SIHLAMDGLSLLMVALTGLLGVLSVLCSWnEIQRRIGFFHLNLLWILGGVIGVFLAIDLFLFFFFWEMMLVPMYFLIALW 158
Cdd:PRK02546 80 TWSVGADGLSMPLILLTGFITTLAVLAAW-PVTFKPKLFYFLMLAMYGGQIAVFAVQDMLLFFLAWELELIPVYLLLAIW 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 159 GhssddGKKtRIYAATKFFIFTQASGLVMLVAILGLVFVnfnaTGVITFDYATLLKTQLSPHVEWLLMLGFFVAFAVKMP 238
Cdd:PRK02546 159 G-----GKK-RQYAATKFILYTAGSSLFILLAALAMAFY----GDTPTFDMTALAAKDFGLGFQLLCYAGLLIAYGVKLP 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 239 VVPVHSWLPDAHAQAPTAGSVDLAGILLKTAAYGLIRFALPLFPNASAEFAPIAMWLGIIGIFYGALLSFAQTDIKRLVA 318
Cdd:PRK02546 229 IVPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALLRMNAGMLPDAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIA 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 319 YSSVSHMGFVMIGIYSGSQVALQGVVVQMIAHGLSAAALFILCGQLYERLHTRDMRKMGGLWSRMPYLPAISLFFASASL 398
Cdd:PRK02546 309 YSSISHMGFVLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRKMFAMWTACSLASL 388
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 399 GLPGTGNFVGEFLILIG---------AFKVvpVIIVIATFGLVFASVYSLIMIHRAYFGPSQ----SDEPILGLDARELS 465
Cdd:PRK02546 389 ALPGMSGFVAELMVFVGfatsdaytlPFRV--VVVFLAAVGVILTPIYLLSMLREIFFGPENkelvSHEKLVDAEPREVF 466
|
490 500 510 520
....*....|....*....|....*....|....*....|..
gi 489188289 466 MVLGLAVLLVLLGVYPQPVLDISAASMHGVQQWLGAALSTLA 507
Cdd:PRK02546 467 IIACLLVPIIGIGLYPKLVTQSYDATTNQLVARDRDSVPSLA 508
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
2-448 |
1.05e-92 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 291.22 E-value: 1.05e-92
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 2 ILPWLILIPFIGGFL--CWIAEHSSKtLPRWIALLSMTLVLILSLWIwatgDFQLAPapgGEPEWTLQFKVLWIERLGIS 79
Cdd:PRK06473 1 MLSALIWIPLLGAILigFWPSGINGK-LARSVALVIASVLLLLSLVL----AFQFDP---GNPNQQFTEFIPWIDSLGLS 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 80 IHLAMDGLSLLMVALTGLLGVLSVLCSWNEIQRRiGFFHLNLLWILGGVIGVFLAIDLFLFFFFWEMMLVPMYFLIALWG 159
Cdd:PRK06473 73 YHLGVDGLSLPLLVLNSLLTLIAIYSSDESIQRP-RFYYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLIAIWG 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 160 HSSddgkktRIYAATKFFIFTQASGLVMLVAILGLVFVnfnaTGVITFDYATLLKTQLSPHVEWLLMLGFFVAFAVKMPV 239
Cdd:PRK06473 152 GQR------RGYAATKFLLYTAISGILILVSFLGLVWL----SGASSFDYEPLRSHTLPLSTQLLLLAPILVGFGIKIPL 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 240 VPVHSWLPDAHAQAPTAGSVDLAGILLKTAAYGLIRFALPLFPNASAEFAPIAMWLGIIGIFYGALLSFAQTDIKRLVAY 319
Cdd:PRK06473 222 VPFHTWLPDAHVEASTPVSVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLAPWLATWAVVSVLYGASCAIAQKDMKKMVAY 301
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 320 SSVSHMGFVMIGIYSGSQVALQGVVVQMIAHGLSAAALFILCGQLYERLHTRDMRKMGGLWSR---MPYLPAISLFFASA 396
Cdd:PRK06473 302 SSIGHMGYILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLLNPergLPITGSLMILGVMA 381
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|..
gi 489188289 397 SLGLPGTGNFVGEFLILIGAFKVVPVIIVIATFGLVFASVYSLIMIHRAYFG 448
Cdd:PRK06473 382 SAGIPGMVGFIAEFLVFRGSFPIFPVQTLLCMIGTGLTAVYFLLLVNRVFFG 433
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
1-448 |
7.34e-91 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 285.80 E-value: 7.34e-91
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 1 MILPWLILIPFIGGFLCWIAEHSSKTLPRWIALLSMTLVLILSLWIWATGDfqlapapgGEPEWTLQFKVLWIERLGISI 80
Cdd:MTH00204 1 NGLSLIFLILFMGIINVMGVPRENSVKLKKRALEWSLAILFSTLVLWGAFD--------GEGQFQFINLIEWIISPTLNF 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 81 H-----LAMDGLSLLMVALTGLLGVLSVLCSWNEIQRRIGFFHLNLLWILGGVIGVFLAIDLFLFFFFWEMMLVPMYFLI 155
Cdd:MTH00204 73 QwgplvFAVDGVSLFFILLTTLLIPICILISWKSIKFLFKEFLLCLLFLEVLLIGVFSVLDLLLFYILFEGILIPMFLLI 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 156 ALWGHssddgKKTRIYAATKFFIFTQASGLVMLVAILGLvfvnFNATGviTFDYATLLKTQLSPHVEWLLMLGFFVAFAV 235
Cdd:MTH00204 153 GIWGS-----REEKVRASYYFFFYTFAGSVFMLLGIFQL----YSITG--TTDYQILLNIKLPLSIQKWLLVGFFLSLAV 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 236 KMPVVPVHSWLPDAHAQAPTAGSVDLAGILLKTAAYGLIRFALPLFPNASAEFAPIAMWLGIIGIFYGALLSFAQTDIKR 315
Cdd:MTH00204 222 KIPQIPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASEYFAPLIVMLSVIAVIYGSLTTCRQVDFKR 301
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 316 LVAYSSVSHMGFVMIGIYSGSQVALQGVVVQMIAHGLSAAALFILCGQLYERLHTRDMRKMGGLWSRMPYLPAISLFFAS 395
Cdd:MTH00204 302 LIAYSSVAHMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSL 381
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 489188289 396 ASLGLPGTGNFVGEFLILIGAFKVVPVIIVIATFGLVFASVYSLIMIHRAYFG 448
Cdd:MTH00204 382 ANMGFPLSCNFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYLYNRISFG 434
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
2-451 |
1.05e-90 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 285.41 E-value: 1.05e-90
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 2 ILPWLILIPFIGGFLCWIAEHSSKTLPRWIALLSMTLVLILSLWIWATGDfqlapapgGEPEWTLQFKVLWI---ERLGI 78
Cdd:MTH00217 1 MLELVFILPLIGILHLLIIPRDNIVRLKKIALEWSLLTLTATILLWASFD--------GEGQFQAIKKFEWIpgiEPVFG 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 79 SIHLAMDGLSLLMVALTGLLGVLSVLCSWNEIQRRIGFFHLNLLWILGGVIGVFLAIDLFLFFFFWEMMLVPMYFLIALW 158
Cdd:MTH00217 73 PVVFAVDGISIFFLILTALLTPICILISWNSIKFLIKEFLLCLLVIEILLMGVFTILDLVGFYILFEGILIPMFLIIGIW 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 159 GhssddGKKTRIYAATKFFIFTQASGLVMLVAIlglvFVNFNATGviTFDYATLLKTQLSPHVEWLLMLGFFVAFAVKMP 238
Cdd:MTH00217 153 G-----SREEKVQASYYFFFYTFIGSVFMLLGI----FTLYSYAG--TTDYQALCCLKIEKELQYFIFLGFFLSLAIKIP 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 239 VVPVHSWLPDAHAQAPTAGSVDLAGILLKTAAYGLIRFALPLFPNASAEFAPIAMWLGIIGIFYGALLSFAQTDIKRLVA 318
Cdd:MTH00217 222 KIPFHIWLPQAHVEAPVAGSVILAGVLLKLGGYGFIRFSWPLLPEASEYFSPLIQTLSLLAIIYGSLTTCRQVDLKRIIA 301
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 319 YSSVSHMGFVMIGIYSGSQVALQGVVVQMIAHGLSAAALFILCGQLYERLHTRDMRKMGGLWSRMPYLPAISLFFASASL 398
Cdd:MTH00217 302 YSSVAHMGLVTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYYRGMVITMPLFGILMLLLVLANA 381
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 489188289 399 GLPGTGNFVGEFLILIGAFKVVPVIIVIATFGLVFASVYSLIMIHRAYFG-PSQ 451
Cdd:MTH00217 382 SIPLSCNFVGEFLSLLAAFEYSYIVGVLASLGMVLSAGYSIYLYNRVCFGaPSK 435
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
3-448 |
1.02e-89 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 283.37 E-value: 1.02e-89
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 3 LPWLILI---PFIGGFLCWIAEHSSKTLPRWIALLSMTLVLILSLWIWATgDFQLapapgGEPEWTLQFKVLWIERLGIS 79
Cdd:CHL00011 4 FPWLTIIvvlPIFAGSLIFFLPHRGNKVIRWYTLCICLLELLLTTYAFCY-HFQL-----DDPLIQLKEDYKWINFFDFH 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 80 IHLAMDGLSLLMVALTGLLGVLSVLCSWnEIQRRIGFFHLNLLWILGGVIGVFLAIDLFLFFFFWEMMLVPMYFLIALWG 159
Cdd:CHL00011 78 WRLGIDGLSIGPILLTGFITTLATLAAW-PVTRNSRLFYFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLLSMWG 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 160 hssddGKKtRIYAATKFFIFTQASGLVMLVAILGLVFVNFNatgVITFDYATLLKTQLSPHVEWLLMLGFFVAFAVKMPV 239
Cdd:CHL00011 157 -----GKK-RLYSATKFILYTAGGSIFLLIGVLGMGLYGSN---EPTLNFETLANQSYPVALEILFYIGFLIAYAVKLPI 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 240 VPVHSWLPDAHAQAPTAGSVDLAGILLKTAAYGLIRFALPLFPNASAEFAPIAMWLGIIGIFYGALLSFAQTDIKRLVAY 319
Cdd:CHL00011 228 IPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWLVIVGAIQIIYAASTSLGQRNLKKRIAY 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 320 SSVSHMGFVMIGIYSGSQVALQGVVVQMIAHGLSAAALFILCGQLYERLHTRDMRKMGGLWSRMPYLPAISLFFASASLG 399
Cdd:CHL00011 308 SSVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGIAIPMPKIFTMFSSFSMASLA 387
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 489188289 400 LPGTGNFVGEFLILIG---------AFKVvpVIIVIATFGLVFASVYSLIMIHRAYFG 448
Cdd:CHL00011 388 LPGMSGFVAELIVFFGiitsqkyllMPKI--LITFVMAIGMILTPIYLLSMLRQMFYG 443
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
2-448 |
7.94e-83 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 265.42 E-value: 7.94e-83
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 2 ILPWLILIPFIGGFLC--WIAEHSSKTLpRWIALLSMTLVLILSLWIWATGDFQlapapggEPEWTLQFKVLWIERLGIS 79
Cdd:PRK07363 1 MLSVLLWLPILGAIIIgfFPGNLPSARL-RQITLVFAVLVLAWSLFLLTQFDLS-------DPGMQFQEYLPWNEPLGLS 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 80 IHLAMDGLSLLMVALTGLLGVLSVLCSWNEIQRRIGFFHLNLLwILGGVIGVFLAIDLFLFFFFWEMMLVPMYFLIALWG 159
Cdd:PRK07363 73 YSLGVDGLSLPLLVLNSLLTWIAIYSIGENTERPRLYYSLILL-INGGIAGALLAQNLLLFFLFYELELIPFYLLIAIWG 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 160 hssddGKKtRIYAATKFFIFTQASGLVMLVAILGLVFVNfnatGVITFDYATLLKTQLSPHVEWLLMLGFFVAFAVKMPV 239
Cdd:PRK07363 152 -----GEK-RGYASIKFLIYTAVSGLLVLAAFLGIVWLS----GSTSFDYDAISTQNLSLNTQLILLTGLLLGFGIKIPL 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 240 VPVHSWLPDAHAQAPTAGSVDLAGILLKTAAYGLIRFALPLFPNASAEFAPIAMWLGIIGIFYGALLSFAQTDIKRLVAY 319
Cdd:PRK07363 222 VPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFGLQLFPQTWSLVAPGLAIIGTISVIYGALSAIAQKDIKRMVAY 301
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 320 SSVSHMGFVMIGIYSGSQVALQGVVVQMIAHGLSAAALFILCGQLYERLHTRDMRKMGGLWSRMPYLPAISLFF---ASA 396
Cdd:PRK07363 302 SSIGHMGYILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGLMNPIRGLPLTSALLvlaGMA 381
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|..
gi 489188289 397 SLGLPGTGNFVGEFLILIGAFKVVPVIIVIATFGLVFASVYSLIMIHRAYFG 448
Cdd:PRK07363 382 SAGIPGLVGFVAEFIVFQGSFSTFPIPTLLCIVASGLTAVYFVILLNRTCFG 433
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
2-436 |
5.27e-80 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 255.84 E-value: 5.27e-80
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 2 ILPWLILIPFIGGFLCWIAeHSSKTLPRWIALLSMTLVLILSLWI--WATGDFQLAPAPGGepewtlqfkvlWIERLGIS 79
Cdd:COG0651 4 LLILPVLLPLLAAALLLLL-GRRRRLQRALSLLASLALLALALALllQVLAGGPLVYALGG-----------WPAPFGIV 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 80 ihLAMDGLSLLMVALTGLLGVLSVL--CSWNEIQRRIGFFHLNLLWILGGVIGVFLAIDLFLFFFFWEMMLVPMYFLIAL 157
Cdd:COG0651 72 --LVADRLSALFLLLTALVALAVLLysIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVAL 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 158 wghssdDGKKTRIYAATKFFIFTQASGLVMLVAILGLvfvnFNATGVITFDYATLLKTQLSPHVEWLLMLGFFVAFAVKM 237
Cdd:COG0651 150 ------GGTKEALRAGLKYLILNLVGSALFLLGVGLL----YGATGTLNMADLAARLAELDPGLLLAAFALLLVGFGIKA 219
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 238 PVVPVHSWLPDAHAQAPTAGSVDLAGILLKTAAYGLIRFALPLFPNASAEFA-PIAMWLGIIGIFYGALLSFAQTDIKRL 316
Cdd:COG0651 220 ALFPLHFWLPDAYPAAPSPVSALLSGLLTKVGVYAILRVLTLLFGADPALFLgTLLLVLGLLTMLVGALGALAQRDLKRL 299
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 317 VAYSSVSHMGFVMIGIYSGSQVALQGVVVQMIAHGLSAAALFILCGQLYERLHTRDMRKMGGLWSRMPYLpAISLFFASA 396
Cdd:COG0651 300 LAYSSVSQIGYILLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLT-AAAFLIGAL 378
|
410 420 430 440
....*....|....*....|....*....|....*....|....
gi 489188289 397 SL-GLPGTGNFVGEFLILIGAFK---VVPVIIVIATFGLVFASV 436
Cdd:COG0651 379 ALaGLPPLSGFVSKWLLLQAALEagaWLLAAVLLLSSLLTLAYF 422
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
23-492 |
2.72e-69 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 230.19 E-value: 2.72e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 23 SSKTLPRWIALLSMTLVLILSLWIWATGDFQLAPAPGGEPEWTLQFKVLWIERLGISIHLAMDGLSLLMVALTGLLGVLS 102
Cdd:MTH00226 39 SGTSSLKRIALFWSFISLISTIILWLSLDQEGGFTPLMDIDWIEGPEKIIPIIMGGPLVFAVDGISIYFIILTGFIVPCS 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 103 VLCSWNEIQRRIGFFHLNLLWILGGVIGVFLAIDLFLFFFFWEMMLVPMYFLIALWGhssddGKKTRIYAATKFFIFTQA 182
Cdd:MTH00226 119 ILISWHSVKYLTKSFLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGIWG-----SREEKMQAAYYFFFYTLI 193
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 183 SGLVMLVAILGLvfvnFNATGviTFDYATLLKTQ--LSPHVEWLLMLGFFVAFAVKMPVVPVHSWLPDAHAQAPTAGSVD 260
Cdd:MTH00226 194 GSVLMLLCLFSL----YNIHG--TTDYLTLASCShvVSEQTQKWIFLGIFLAMAVKIPIFPFHIWLPKAHVEAPVAGSVL 267
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 261 LAGILLKTAAYGLIRFALPLFPNASAEFAPIAMWLGIIGIFYGALLSFAQTDIKRLVAYSSVSHMGFVMIGIYSGSQVAL 340
Cdd:MTH00226 268 LAGILLKLGGYGLVRLSWPILPLGAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMGLVSITLVTHDIIGL 347
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 341 QGVVVQMIAHGLSAAALFILCGQLYERLHTRDMRKMGGLWSRMPYLPAISLFFASASLGLPGTGNFVGEFLILIGAFKVV 420
Cdd:MTH00226 348 TGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGNFIGEYLSILSSFNWN 427
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 489188289 421 PVIIVIATFGLVFASVYSLIMIHRAYFG-PSQSDEPILGLDARELSMVLGLAVLLVLLGVYPQPVLDISAASM 492
Cdd:MTH00226 428 PIIGVFVCSGVILSAVYSFYFANRVTFGaPGNLITFARDVNRREFYITASMVFFAFLIGIYPIFILEVIQNSL 500
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
82-441 |
1.53e-62 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 210.95 E-value: 1.53e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 82 LAMDGLSLLMVALTGLLGVLSVLCSWN----EIQRRIGFFHLNLLWILGGVIGVFLAIDLFLFFFFWEMMLVPMYFLIAL 157
Cdd:MTH00206 55 LSYDPLSSPLVILSCWLLPLMFLASQNhmknEPINRQRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITR 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 158 WGHSSDdgkktRIYAATKFFIFTQASGLVMLVAILglvfvnFNATGVITFDYATLLKTQLSPHVEWLLMLGFFVAFAVKM 237
Cdd:MTH00206 135 WGNQKE-----RLNAGYYFLFYTLIGSLPLLIALL------FLQNSLGSLSLYILYFSKLTTWNNNLWWLACILAFLVKL 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 238 PVVPVHSWLPDAHAQAPTAGSVDLAGILLKTAAYGLIRFALPLFPNASAEFAPIaMWLGIIGIFYGALLSFAQTDIKRLV 317
Cdd:MTH00206 204 PLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGYGMMRIILILGPSTKLSSYFF-IILGLWGSIMTSSICLRQTDLKSLI 282
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 318 AYSSVSHMGFVMIGIYSGSQVALQGVVVQMIAHGLSAAALFILCGQLYERLHTRDMRKMGGLWSRMPYLPAISLFFASAS 397
Cdd:MTH00206 283 AYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGLVSSALFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLAN 362
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 489188289 398 LGLPGTGNFVGEFLILIGAFKVVPVIIVIATFGLVFASVYSLIM 441
Cdd:MTH00206 363 LGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFLFTAIYSLYM 406
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
134-432 |
3.39e-61 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 202.54 E-value: 3.39e-61
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 134 AIDLFLFFFFWEMMLVPMYFLIALWGhssddGKKTRIYAATKFFIFTQASGLVMLVAILGLvfvnFNATGVITFDYatLL 213
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWG-----KSPRSSEAGMKYFLLTLLGSSILLFGISLM----YNYTGTLSFDE--LS 69
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 214 KTQLSPHVEWLLMLGF---FVAFAVKMPVVPVHSWLPDAHAQAPTAGSVDLAGILLKTAAYGLIRFaLPLFPNASAEFAP 290
Cdd:pfam00361 70 KALTGGLNSSGLLLLFlliLVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRR-SLLYLPSSPFIQQ 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 291 IAMWLGIIGIFYGALLSFAQTDIKRLVAYSSVSHMGFVMIGIYSGSQVALQGVVVQMIAHGLSAAALFILCGQ-LYERLH 369
Cdd:pfam00361 149 ILLILAIISMLLGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAGSvIYRRVH 228
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 489188289 370 TRDMRKMGGLWSRMPYLPAISLFFASASLGLPGTGNFVGEFLILIGAFKVVPVIIVIATFGLV 432
Cdd:pfam00361 229 TRNIRDYGGLAKTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
82-441 |
2.02e-59 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 201.61 E-value: 2.02e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 82 LAMDGLSLLMVALTGLLGVLSVLCSWNEIQRRIGF--FHLNLLWILGGVIGVFLAIDLFLFFFFWEMMLVPMYFLIALWG 159
Cdd:MTH00150 20 FSVDSMSSLLISLSLWISGLMMLASQKSVKLRNKSssFSLLVLLLCLILVLAFSVSSLLMFYFFFEASLIPTLLLILGWG 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 160 HSSDdgkktRIYAATKFFIFTQASGLVMLVAILgLVFVNFNaTGVITFDYATLLKTQLSphveWLLMLGFFVAFAVKMPV 239
Cdd:MTH00150 100 YQPE-----RLQAGMYMMLYTVGASLPLLLVIL-WMSSSYG-SSFMLLISSLRKLLSSM----GLWGLLVFLAFLVKLPM 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 240 VPVHSWLPDAHAQAPTAGSVDLAGILLKTAAYGLIRFaLPLFPNASAEFAPIAMWLGIIGIFYGALLSFAQTDIKRLVAY 319
Cdd:MTH00150 169 YPFHLWLPKAHVEAPVAGSMILAGILLKLGGYGILRM-MMVFSLSSSSFSIFLISLSLWGGVLTSLICLRQSDVKSLIAY 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 320 SSVSHMGFVMIGIYSGSQVALQGVVVQMIAHGLSAAALFILCGQLYERLHTRDMRKMGGLWSRMPYLPAISLFFASASLG 399
Cdd:MTH00150 248 SSVGHMSLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLSLWWFLFCIINMA 327
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 489188289 400 LPGTGNFVGEFLILIGAFKVVPVIIVIATFGLVFASVYSLIM 441
Cdd:MTH00150 328 APPSLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYL 369
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
78-440 |
2.55e-57 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 197.12 E-value: 2.55e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 78 ISIHLAMDGLSLLMVALTGLLGVLSVLCSWNEIQ------RRIgfFHLNLLWILGGVIGVFLAIDLFLFFFFWEMMLVPM 151
Cdd:MTH00044 53 LSLSLATDSLSSPLIILSCWLAPLSLLASINHLSnnspnnQRT--FISLIIIILTALIITFSSLELILFYIAFETTLIPT 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 152 YFLIALWGhssddGKKTRIYAATKFFIFTQASGLVMLVAILGLVFVNFNATGVITFDYATLLKTQLSPHVEWLLMlgfFV 231
Cdd:MTH00044 131 LILITRWG-----AQKERIQAGLYFLFYTLFGSLPLLISLIAIYSSSSSLSIPLSELNWLTSLSSNSSSIWWIFC---IL 202
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 232 AFAVKMPVVPVHSWLPDAHAQAPTAGSVDLAGILLKTAAYGLIR----FALPLFPNASAEFAPIAMWLGIIGifygALLS 307
Cdd:MTH00044 203 AFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILLKLGGYGLIRlinlFSLPSANNISFILIVFCCWGALIT----SIIC 278
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 308 FAQTDIKRLVAYSSVSHMGFVMIGIYSGSQVALQGVVVQMIAHGLSAAALFILCGQLYERLHTRDMRKMGGLWSRMPYLP 387
Cdd:MTH00044 279 LRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILMIAHGLVSSALFCLANILYERSGTRTLSITRGFKLITPLLP 358
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|...
gi 489188289 388 AISLFFASASLGLPGTGNFVGEFLILIGAFKVVPVIIVIATFGLVFASVYSLI 440
Cdd:MTH00044 359 LWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPIIGLATVFGAIYSLL 411
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
1-462 |
5.44e-56 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 194.33 E-value: 5.44e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 1 MILPWLILIPFIGGFLCWIAeHSSKTLPRWIALLSMTLVLILSLWIWATGdfqlapAPGGEPEWTLqfkVLWIErlGISI 80
Cdd:PRK08375 4 HLLPLLVAVPLLAAALIVLL-PKRRRLRWALALLVAALTFALAISLLPQV------LDGGVIAYVV---GGWPP--GIGI 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 81 HLAMDGLSLLMVALTGLLGVLSVLCSWNEIQRRIGFFHLNLLWILGGVIGVFLAIDLFLFFFFWEMMLVPMYFLIALwgh 160
Cdd:PRK08375 72 ELRADSLSALFLLVTSILAIAALLYAIGYGEHRQTRFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAM--- 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 161 ssdDGKKTRIYAATKFFIFTQASGLVMLVAIlGLVFVnfnATGVITFDyatLLKTQLSPHVEWLLMLGF-FVAFAVKMPV 239
Cdd:PRK08375 149 ---GGDRRALAAARKYLIVGLIGSTFLLIGV-GLLYG---VTGTLNMA---DLAGALAENPTVVTAFGFvLLALALKAAV 218
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 240 VPVHSWLPDAHAQAPTAGSVDLAGILLKTAAYGLIRFALPLFP---NASAEFAPIAMWLGIIGIFYGALLSFAQTDIKRL 316
Cdd:PRK08375 219 FPLHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYFTVFGgdfRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRV 298
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 317 VAYSSVSHMGFVMIGIYSGSQVALQGVVVQMIAHGLSAAALFILCGQLYERLHTRDMRKMGGLWSRMPYLpAISLFFASA 396
Cdd:PRK08375 299 LAYSTVSQMGYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSELSGLGRRMPLT-AAAFAVASL 377
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 489188289 397 SL-GLPGTGNFVGEFLILIGAFKV----VPVIIVIATFGLVFasvYSLIMIHRAYFGPSQSDEPILGLDAR 462
Cdd:PRK08375 378 SLiGVPPTSGFVSKWYLVVGAVEAgqwlVLAVLLASSLLALL---YFLRIWYRAFFGPPPPGSEAPKQEAP 445
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
78-441 |
2.67e-51 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 180.74 E-value: 2.67e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 78 ISIHLAMDGLSLLMVALTGLLGVLSVLCSWNEIQRR--IGFFHLNLLWILGGVIGVFLAIDLFLFFFFWEMMLVPMYFLI 155
Cdd:MTH00163 48 ISYFFGLDLLSFGLILLSFWICMLMILSSESVYKKNnySNLFLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLI 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 156 ALWGHSSDdgkktRIYAATKFFIFTQASGLVMLVAIlglvFVNFNATGVITFDYatllkTQLSPHVEWLLMLGFFVAFAV 235
Cdd:MTH00163 128 LGWGYQPE-----RLQAGIYLLFYTLFASLPLLVGI----FYLYNNSGSLSFFL-----LNFFGSLNFLWYLSMILAFLV 193
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 236 KMPVVPVHSWLPDAHAQAPTAGSVDLAGILLKTAAYGLIRFaLPLFPNASAEFAPIAMWLGIIGIFYGALLSFAQTDIKR 315
Cdd:MTH00163 194 KMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRV-MSFFSKLGLKFNYIWISISLVGGVIVSLICLRQVDLKS 272
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 316 LVAYSSVSHMGFVMIGIYSGSQVALQGVVVQMIAHGLSAAALFILCGQLYERLHTRDMRKMGGLWSRMPYLPAISLFFAS 395
Cdd:MTH00163 273 LIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHGLCSSGLFCLANIIYERLGSRSLLINKGLLNFMPSMSLWWFLLSS 352
|
330 340 350 360
....*....|....*....|....*....|....*....|....*.
gi 489188289 396 ASLGLPGTGNFVGEFLILIGAFKVVPVIIVIATFGLVFASVYSLIM 441
Cdd:MTH00163 353 SNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLLSFFSAAYSLYL 398
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
132-441 |
6.88e-50 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 177.42 E-value: 6.88e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 132 FLAIDLFLFFFFWEMMLVPMYFLIALWGHssddgKKTRIYAATKFFIFTQASGLVMLVAILGLvfvnFNATGVITFDYAT 211
Cdd:MTH00068 110 FSATELILFYIFFEATLIPTLIIITRWGN-----QEERLNAGTYFLFYTLAGSLPLLIALLIL----QNSLGSLSLILLE 180
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 212 LLK-TQLSPHVEWLLMLGFFVAFAVKMPVVPVHSWLPDAHAQAPTAGSVDLAGILLKTAAYGLIRFAlPLFPNASAEFAP 290
Cdd:MTH00068 181 LMSpMQLMTYTNKIWWLACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGILRIS-ILLTPLSKELSY 259
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 291 IAMWLGIIGIFYGALLSFAQTDIKRLVAYSSVSHMGFVMIGIYSGSQVALQGVVVQMIAHGLSAAALFILCGQLYERLHT 370
Cdd:MTH00068 260 PFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISHGLTSSALFCLANTNYERTHS 339
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 489188289 371 RDMRKMGGLWSRMPYLPAISLFFASASLGLPGTGNFVGEFLILIGAFKVVPVIIVIATFGLVFASVYSLIM 441
Cdd:MTH00068 340 RTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLGTLITAAYTLYM 410
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
82-441 |
2.85e-48 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 173.00 E-value: 2.85e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 82 LAMDGLSLLMVALTGLLGVLSVLCSWNEIQRRIG--FFHLNLLWILGGVIGVFLAIDLFLFFFFWEMMLVPMYFLIALWG 159
Cdd:MTH00014 55 LSSDMLSAPLITLTLWITALMILASFKIFQNNKApkTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWG 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 160 HSSDdgkktRIYAATKFFIFTQASGLVMLVAILGLVFVNfnatgvitfDYATLLKTQLSPHVEWLLMLGFFV---AFAVK 236
Cdd:MTH00014 135 YQPE-----RLQASFYLMIYTVTASLPLLMSILLIFYTN---------NSLSMLMSSMEPPSIYLMNLWWLItilAFMVK 200
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 237 MPVVPVHSWLPDAHAQAPTAGSVDLAGILLKTAAYGLIRFAlPLFP----NASAEFAPIAMWLGIIGifygALLSFAQTD 312
Cdd:MTH00014 201 MPLYTVHLWLPKAHVEAPVAGSMILAGILLKLGGYGLLRMS-SLFMhinkSLSAPFSSISLVGAVIT----SLICIRQPD 275
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 313 IKRLVAYSSVSHMGFVMIGIYSGSQVALQGVVVQMIAHGLSAAALFILCGQLYERLHTRDMRKMGGLWSRMPYLPAISLF 392
Cdd:MTH00014 276 LKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAHGLCSSALFALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFL 355
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 489188289 393 FASASLGLPGTGNFVGEFLILIGAFKVVPVIIVIATFGLVFASVYSLIM 441
Cdd:MTH00014 356 LSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAITSFLAAAYSLFL 404
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
2-455 |
2.91e-47 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 173.03 E-value: 2.91e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 2 ILPWLILIPFIGGFLCWIAE-HSSKTLPRWIALLSMTLVLILSLWIWatgdFQLAPAPGGEPEWTlqfkvlWIER--LGI 78
Cdd:COG1009 3 LLWLIPLLPLLGALLAGLLGrRLGRRAAGWLAALAPLAAFVLSLLLF----PAVLGGEVVVELYT------WIPVgsLGL 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 79 SIHLAMDGLSLLMVALTGLLGVLSVLCSWN--EIQRRIGFFHLNLLWILGGVIGVFLAIDLFLFFFFWEMMLVPMYFLIA 156
Cdd:COG1009 73 DFGFRLDGLSLLMLLLVTGVGLLVHIYSIGymSGDPGLARFFAYLLLFMAAMLGLVLSDNLLLLFVFWELVGLCSYLLIG 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 157 LWGHssddgKKTRIYAATKFFIFTQASGLVMLVAILGLvfvnFNATGviTFDYATLL---KTQLSPHVEWLLMLGFFVAF 233
Cdd:COG1009 153 FWYE-----KPSARRAARKAFLVTRVGDLGLLLGILLL----GAIAG--TLNFSELLaaaPTILSSPLLTLILLLLLLGA 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 234 AVKMPVVPVHSWLPDAHAqAPTAGSVDL-AGILLKTAAYGLIRFAlPLFpNASAEFAPIAMWLGIIGIFYGALLSFAQTD 312
Cdd:COG1009 222 FGKSAQFPLHFWLPDAME-GPTPVSALLhAATMVKAGVYLLARLS-PLF-ALSPVWLTVVAIIGAITALFAALIALAQTD 298
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 313 IKRLVAYSSVSHMGFVMIGIYSGsqvALQGVVVQMIAHGLSAAALFILCGQLYERLHTRDMRKMGGLWSRMPYLPAISLF 392
Cdd:COG1009 299 IKRVLAYSTVSQLGYMFLALGVG---AYVAALFHLLTHAFFKALLFLGAGSVIHATGTRDIRKMGGLRKKMPITAITFLI 375
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 489188289 393 FASASLGLPGTGNFVGEFLILIGAFKVV---PVIIVIATFGLVFASVYSLIMIHRAYFGPSQSDEP 455
Cdd:COG1009 376 GALSLAGIPPFAGFFSKEAILEAALEAGglgPLLLAVALLGAFLTAFYSFRLFFLVFFGKPRPKTP 441
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
132-441 |
1.49e-46 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 168.45 E-value: 1.49e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 132 FLAIDLFLFFFFWEMMLVPMYFLIALWGHSSDdgkktRIYAATKFFIFTQASGLVMLVAILglvFVNfNATGVITFDYAT 211
Cdd:MTH00124 110 FSATELTLFYIMFEATLIPTLILITRWGNQPE-----RLSAGTYFLFYTLISSLPLLIAIL---YLH-NQTGTLSLPMLQ 180
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 212 LLKTQLSPHVEWLLM-LGFFVAFAVKMPVVPVHSWLPDAHAQAPTAGSVDLAGILLKTAAYGLIRFALPLFPNASAEFAP 290
Cdd:MTH00124 181 LTHPTLTNSWTNLLLwLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGIIRITLLLPPLSNTLHYP 260
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 291 ---IAMWlgiiGIFYGALLSFAQTDIKRLVAYSSVSHMGFVMIGIYSGSQVALQGVVVQMIAHGLSAAALFILCGQLYER 367
Cdd:MTH00124 261 fltLALW----GALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILMIAHGLTSSMLFCLANTNYER 336
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 489188289 368 LHTRDMRKMGGLwsrMPYLPAISLFFASASL---GLPGTGNFVGEFLILIGAFKVVPVIIVIATFGLVFASVYSLIM 441
Cdd:MTH00124 337 THSRTLLLTRGL---QLLLPLMTTWWLLANLtnmALPPTINLMGELTIMTSLFNWSPTTIILTGLATLITASYTLYM 410
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
4-454 |
1.76e-46 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 169.38 E-value: 1.76e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 4 PWLILIPFIGGFLCWIAEhSSKTLPRWIALLSMTLVLILSLWIwatgdFQLAPAPGGEPEWTLQFkvlWIERLGISihLA 83
Cdd:PRK12667 11 ILLVLFAFLLPLLSILLK-GNRKIQKIYALLVSLITLILSILL-----FIQVYSSNKPIVYLFGG---WPAPIGIV--YE 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 84 MDGLSLLMVALTGLLGVLSVLCSWNEIQRR--IGFFHLNLLWILGGVIGVFLAIDLFLFFFFWEMMLVPMYFLIALWGHS 161
Cdd:PRK12667 80 VDLLGALLGLLTALVMFLILIYSYWYLEHEsgPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRDR 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 162 SDdgkktRIYAATKFFIFTQASGLVMLVAILGLVF----VNFNATGVITFDYATLLKTQLSPHVEWLLMLG---FFVAFA 234
Cdd:PRK12667 160 GD-----AVEAAIKYALIGAVGTTLYFLALAFLYAtfgtLNMADLSAKIRGLSFPLTGGLAGNPPLALGVAlalALWAFT 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 235 VKMPVVPVHSWLPDAHAQAPTAGSVDLAGILLKTAAYGLIRFALPLFPNASAE------FAPIAMWLGIIGIFYGALLSF 308
Cdd:PRK12667 235 IKAAIFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFLYTIFGISPSLidfraaLSPILIILGAVSAIIGALMMV 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 309 AQTDIKRLVAYSSVSHMGFVMIGIYSGSQVALQGVVVQMIAHGLSAAALFILCGQLYERLHTRDMRKMGGLWSRMPYLPA 388
Cdd:PRK12667 315 VQKDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDELAGLGRKMPIASF 394
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 489188289 389 ISLFFASASLGLPGTGNFVGEFLILIGAFKVVPVI-IVIATFGLVFASVYSLIMIHRAYFGPSQSDE 454
Cdd:PRK12667 395 AFLIGALSLVGIPPLNGFFSKLLLFNALLESGFYLpALVLLIASAISLVGYFRAWYSLFFGKPKSGE 461
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
77-441 |
2.96e-43 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 158.99 E-value: 2.96e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 77 GISIHLAMDGLSLLMVALTGLLGVLSVLCSWNEIQRRIGF--FHLNLLWILGGVIGVFLAIDLFLFFFFWEMMLVPMYFL 154
Cdd:MTH00205 48 FISSSFSFDSLSLPLIMLSFWISLLMVLASYKVFKSNKNSklFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLIL 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 155 IALWGHSSDdgkktRIYAATKFFIFTQASGLVMLVAILGLVFVNFNATGVITFDYATllktqlSPHVEWLLMLGFFVAFA 234
Cdd:MTH00205 128 ILGWGYQPE-----RLQASMYMMMYTLCASLPLLIGLFFLNSLNFSLSMFFNFPLNF------SDFYLFLYWIFLMLAFL 196
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 235 VKMPVVPVHSWLPDAHAQAPTAGSVDLAGILLKTAAYGLIRFALPLFPNASaEFAPIAMWLGIIGIFYGALLSFAQTDIK 314
Cdd:MTH00205 197 VKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRITSMLYKLNS-NFSELFFSISLWGGVMTGMICLRQVDLK 275
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 315 RLVAYSSVSHMGFVMIGIYSGSQVALQGVVVQMIAHGLSAAALFILCGQLYERLHTRDMRKMGGLWSRMPYLPAISLFFA 394
Cdd:MTH00205 276 SLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGMFALANVNYERTNSRSMLMNKGVLNTFPFLVLMWFLLI 355
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 489188289 395 SASLGLPGTGNFVGEFLILIGAFKVVPVIIVIATFGLVFASVYSLIM 441
Cdd:MTH00205 356 SCNMAAPPSLNLASEILLIMSLLSSSKISGIPLSLISFLSGAYSLYL 402
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
81-441 |
3.52e-43 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 159.35 E-value: 3.52e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 81 HLAMDGLSLLMVALTGLLGVLSVLCSWN----EIQRRIGFFHLNLLWILGGVIGVFLAIDLFLFFFFWEMMLVPMYFLIA 156
Cdd:MTH00127 56 YMATDPLSTPLLVLTCWLLPLMILASQNhtapEPINRQRMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTLIIIT 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 157 LWGHSSDdgkktRIYAATKFFIFTQASGLVMLVAILGLvfvnFNATG---VITFDYATLLktQLSPHVEWLLMLGFFVAF 233
Cdd:MTH00127 136 RWGNQTE-----RLNAGTYFLFYTLAGSLPLLVALLLL----QNSTGtlsMLTLQYSQPL--QLSSWADKLWWAGCLLAF 204
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 234 AVKMPVVPVHSWLPDAHAQAPTAGSVDLAGILLKTAAYGLIRFAL---PLFPNASAEFAPIAMWlgiiGIFYGALLSFAQ 310
Cdd:MTH00127 205 LVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMMVmldPLTKELSYPFIILALW----GIIMTGSICLRQ 280
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 311 TDIKRLVAYSSVSHMGFVMIGIYSGSQVALQGVVVQMIAHGLSAAALFILCGQLYERLHTRDMRKMGGLWSRMPYLPAIS 390
Cdd:MTH00127 281 TDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWW 360
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|.
gi 489188289 391 LFFASASLGLPGTGNFVGEFLILIGAFKVVPVIIVIATFGLVFASVYSLIM 441
Cdd:MTH00127 361 FIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLGTLITAGYSLYM 411
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
1-455 |
2.81e-42 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 157.40 E-value: 2.81e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 1 MILPWLILIPFIGGFLCWIAEHSSKTlpRWIALLSMTLVLILSLWIwatgdFQLAPAPGGEPEWTLQFKVlwierlgisi 80
Cdd:PRK06458 5 ILFALLLLIPLLASLLLFALRKRRLV--ATLNVLGITLTLILALWL-----VFTVPDAGEIFAAGLWFFI---------- 67
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 81 hlamDGLSLLMVALTGLLGVLSVLCSWNEIQ----------RRIGFFHLNLLWILGGVIGVFLAIDLFLFFFFWEMMLVP 150
Cdd:PRK06458 68 ----DDLNVFFLALIGVVGFLTSLYSIGYMRhevehgelspVTLRLYYGMYQLFLFTMLLALTSNNLGLMWVAIEATTLS 143
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 151 MYFLIALWGHssddgkKTRIYAATKFFIFTQAsGLVMlvAILGLVFVNFNATGVITFDYATLLKTQLSPHVEWL----LM 226
Cdd:PRK06458 144 SALLVGIYRT------RASLEAAWKYIIICSV-GVAF--ALFGTILVYANAATVMGDGEMAILWTELLKHASLLdptlMK 214
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 227 LGF---FVAFAVKMPVVPVHSWLPDAHAQAPTAGSVDLAGILLKTAAYGLIRFALPLFPNASAEFA-PIAMWLGIIGIFY 302
Cdd:PRK06458 215 LAFvflLIGFGTKVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYYILIDAAIGSDFPgRLLLIFGLLSVLV 294
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 303 GALLSFAQTDIKRLVAYSSVSHMGFVMIGIYSGSQVALQGVVVQMIAHGLSAAALFILCGQLYERLHTRDMRKMGGLWSR 382
Cdd:PRK06458 295 AAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKV 374
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 489188289 383 MPYLPAISLFFASASLGLPGTGNFVGEFLILIGAFK---VVPVIIVIATFGLVFASVysLIMIHRAYFGPSQSDEP 455
Cdd:PRK06458 375 SPLTGWGLMLGALAIAGMPPFGVFISEFLILTAGLArgpLLIAILLLLLLTLAFAAL--VRRVAGMVFGEPPEAVN 448
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
129-442 |
7.28e-40 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 150.04 E-value: 7.28e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 129 IGVFLAIDLFLFFFFWEMMLVPMYFLIALWGHSSDdgkktRIYAATKFFIFTQASGLVMLVAILGLvfvnFNATGVITFD 208
Cdd:MTH00110 107 IMTFTATELIMFYILFEATLIPTLIIITRWGNQTE-----RLNAGLYFLFYTLVGSLPLLVALLYI----QNNLGSLNFL 177
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 209 YATLLKTQLSPhvEW---LLMLGFFVAFAVKMPVVPVHSWLPDAHAQAPTAGSVDLAGILLKTAAYGLIRFALPLFPNAS 285
Cdd:MTH00110 178 LLQLWAQPLPN--SWsnnLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITIILNPLTE 255
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 286 AEFAPIAMwLGIIGIFYGALLSFAQTDIKRLVAYSSVSHMGFVMIGIYSGSQVALQGVVVQMIAHGLSAAALFILCGQLY 365
Cdd:MTH00110 256 FMAYPFLM-LSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNY 334
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 489188289 366 ERLHTRDMRKMGGLWSRMPyLPAISLFFAS-ASLGLPGTGNFVGEFLILIGAFKVVPVIIVIATFGLVFASVYSLIMI 442
Cdd:MTH00110 335 ERIHSRTMILARGLQTLLP-LMATWWLLASlTNLALPPTINLIGELFVIMSSFSWSNITIILMGLNMLITALYSLYML 411
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
1-453 |
7.66e-39 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 149.38 E-value: 7.66e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 1 MILPWLILIPFIGGFLCWIAehsSKTLPRWIALLSMTLVLILSLWIWATgdfqlapapggepeWTLQFKVLWIERLGISI 80
Cdd:PRK08668 1 MELTLLLLTPLIGSVLAYLL---KKINEKIGVIGNALPLLFLIKLYFTL--------------KVGTGEKLTLFFGGFKL 63
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 81 HLAMDGLSLLMVALTGLLGVLSVLCSWNEIQRRIGFFHLNLLWILGGVIGVFLAIDLFLFFFFWEMMLVPMYFLIALwgh 160
Cdd:PRK08668 64 TFTLTHLSWFFAMISLLVIFSVAFFMVSEKTKNDAYFNMFALMSLAGVLGVFLANDLLTLYIFWEIMTFSSFMMVPM--- 140
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 161 ssddGKKTRIYAATKFFIFTQASGLVMLVAIlglvFVNFNATGviTFDYATLL-KTQLSPHVEWLLMLGFF-VAFAV-KM 237
Cdd:PRK08668 141 ----GKKESRKASLKYFVLSAIGAYAMLYAI----FLIYAKTG--TFDFADISqGLINDTSTGFALIVFLFlLAFGVaKA 210
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 238 PVVPVHSWLPDAHAQAPTAGSVDLAGILLKTAAYGlirFALPLFPNASAEFAP-------------IAMWLGIIGIFYGA 304
Cdd:PRK08668 211 GIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYG---FLLVLYVLPGTKLFSefgtyrgvplfnyILAWLGNISIIVGT 287
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 305 LLSFAQTDIKRLVAYSSVSHMGFVMIGIYSGSQVALQGVVVQMIAHGLSAAALFILCGQLYERLHTRDMRKMGGLWSRMP 384
Cdd:PRK08668 288 LMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFFLIFAAVIYRTGTTKISEMGGLIEKMP 367
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 385 YLPAISLFFASASLGLPGTGNFVGEFLILIGAF-KVVPVIIVIATFGLVFASVYSLIMIHRAYFGPSQSD 453
Cdd:PRK08668 368 FTFAMYLVAIISLAGIPPMSGFASKWLIFEALIsKGMPITAFMAFFGSIGSFLYVFRPLAGVFLGQLPSD 437
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
2-449 |
2.46e-37 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 144.08 E-value: 2.46e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 2 ILPWLILIPFIGGFLC-WIAEHSSKTLPRWIALLS-MTLVLILSLWIWATGDFQLAPAPGGE-PEWTLQFKVLWIErlgI 78
Cdd:PRK08376 6 LPPLLIIIPLFGAFSMpIVSLLGGKAREIWAVLISfLTLIVALLVFYEVWNNGTIVYVLGAEsPTLTLPFGSGGFP---I 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 79 SIHLAMDGLSLLMVALTGLLGVLSVLCSWNEIQRRIG---FFHLNLLWILGgVIGVFLAIDLFLFFFFWEMMLVPMYFLI 155
Cdd:PRK08376 83 RIIWEVDLFGAFMALIATIVSFLAVLYSISYMKHDTGldkYYTLILLLELG-MLGMAITGDLFNFFVFLEIMSIASYALV 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 156 ALWghsSDDGKKtrIYAATKFFIFTQASGLVMLVAIlGLVFVNFnatGVITFDYATLLKTQLSPHVEWLLMLGFFVAFAV 235
Cdd:PRK08376 162 AFR---NDTWEA--IEAGIKYMFVGSLASSMVLLGI-ALLYGQY---GTLNMAYLAVKMSENPTVVAKIALALFIAGLAM 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 236 KMPVVPVHSWLPDAHAQAPTAGSVDLagILLKTAA-YGLIRFALPLFPNA--SAEFAPIAMWLGIIGIFYGALLSFAQTD 312
Cdd:PRK08376 233 KSGAVPVHMWLPDAYPAAPSSISAML--LVIKQAGlYALARVLFSIYGPAinLATVGWVIIILGCLTMFVGVAMAVVQKD 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 313 IKRLVAYSSVSHMGFVMIGIYSG------------SQVALQGVVVQMIAHGLSAAALFILCGQLYERLHTRDMRKMGGLW 380
Cdd:PRK08376 311 VKRLLAYHSVSQIGYMLLGLGVGlaalgdpamasyGEIALAGGIYHIVNHALYKALLFLTAGAVIYETGTRNLNELGGLA 390
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 489188289 381 SRMPYLPAISLFFASASLGLPGTGNFVGEFLILIGAFKVVPVIIVIATFGLVFASVYSLIMIHRAYFGP 449
Cdd:PRK08376 391 RTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYESSALFNPILGVIAMIGSVLTLASFVKVFHTAFFGP 459
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
2-456 |
7.25e-36 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 139.10 E-value: 7.25e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 2 ILPWLILIpfIGGFLCWIAE----HSSKTLPRWIALLSMTLVLILSLWIWATGDfqlapapggepewtlqfkvlwieRLG 77
Cdd:COG1007 7 LLPEIILL--LGALVLLLLDlflpRRSRRLLAGLALLGLLLALALLLLALGGGT-----------------------GTA 61
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 78 ISIHLAMDGLSLLMVALTGLLGVLSVLCSWNEIQRRIG----FFHLNLLWILGGVIGVFlAIDLFLFFFFWEMMLVPMYF 153
Cdd:COG1007 62 FGGMFVVDGFALFFKLLILLAALLVLLLSRDYLERRGLlrgeFYALLLFATLGMMLMAS-ANDLLTLFLGLELLSLSLYV 140
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 154 LIALWGHSsddgkKTRIYAATKFFIFTQASGLVMLvaiLGLVFVnFNATGviTFDYATLLKT-QLSPHVEWLLMLGF--- 229
Cdd:COG1007 141 LVAFRRDD-----RRSSEAALKYFLLGALSSGFLL---YGISLL-YGATG--SLNLAGIAAAlAAGGANSPLLLLGLvlv 209
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 230 FVAFAVKMPVVPVHSWLPDAHAQAPTAGSVDLAGILlKTAAYG-LIRFALPLFPNASAEFAPIAMWLGIIGIFYGALLSF 308
Cdd:COG1007 210 LAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAP-KIAAFAaLLRLLVEAFPGLAADWQLLLAVLAVLSMTVGNLAAL 288
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 309 AQTDIKRLVAYSSVSHMGFVMIGIYSGSQVALQGVVVQMIAHGLSAAALFILCGQL-YERLHTRDMRKMGGLWSRMPYLp 387
Cdd:COG1007 289 AQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVSAALFYLLAYLFMNLGAFAVILLLsRKGGEAEEIEDLAGLARRSPLL- 367
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 489188289 388 AISLFFASASL-GLPGTGNFVGEFLILIGAFK----VVPVIIVIATfglVFASVYSLIMIHRAYFGPSQSDEPI 456
Cdd:COG1007 368 ALAMTIFLLSLaGIPPTAGFFGKFYVFSAAVEaglyWLAVIAVLNS---VISAYYYLRVVKAMYFDEPEEEAPI 438
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
27-413 |
7.33e-35 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 138.48 E-value: 7.33e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 27 LPRWIALLSMTLVLILSLWIWATGDFQLAPAPGgepewtlQFKVLWIERLGISIHLAMDGLSLLMVALTGLLGVLSVLCS 106
Cdd:PRK06521 28 RPRLAIRLSGPTGLLGGLLGLASGLTALFAGPT-------LAAVLPLGLPFLPFHLRLDALSAFFLLVISLLGAAASLYS 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 107 WNEIQRRIG--------FFHLnllwILGGVIGVFLAIDLFLFFFFWEMMLVPMYFLIalwghsSDDGKKTRIYAATKFFI 178
Cdd:PRK06521 101 LGYFREYEGkgpgamgfFYNL----FLASMVLVLLADDAFSFLVAWETMSLSSWFLV------IANHREAEIRRAGFLYL 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 179 FTQASGLVMLVAILGLVFVNfnaTGviTFDYATLLKTQLSPHVEWLLMLGFFVAFAVKMPVVPVHSWLPDAHAQAPTAGS 258
Cdd:PRK06521 171 LMAHAGALAILLAFGLLARE---SG--SYDFAAMRAAHLSPFWASLVFLLALFGFGAKAGLVPLHVWLPRAHPAAPSHVS 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 259 VDLAGILLKTAAYGLIRFALPLFPNASAEFAPIAMWLGIIGIFYGALLSFAQTDIKRLVAYSSVSHMGFV-------MIG 331
Cdd:PRK06521 246 ALMSGVMLKVAIYGILRVVFDLLGAPGWWWGVLVLALGAISAVLGVLYALAEHDLKRLLAYSTIENIGIIfvglglaMVF 325
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 332 IYSGSQV----ALQGVVVQMIAHGLSAAALFILCGQLYERLHTRDMRKMGGLWSRMPYLPAISLFFASASLGLPGTGNFV 407
Cdd:PRK06521 326 IAYGMPLlaalALTAALYHLLNHALFKSLLFLGAGAVLHATGTRDMEKLGGLIRRMPWTAWAFLIGCLAISALPPLNGFV 405
|
....*.
gi 489188289 408 GEFLIL 413
Cdd:PRK06521 406 SEWLLL 411
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
2-417 |
5.69e-33 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 131.22 E-value: 5.69e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 2 ILPwlILIPFIGG-FLCWIAEHssKTLPRWIALLSMTLVLILSLW----IWATGDFQLA----PAPGGepewtlqfkvlw 72
Cdd:PRK07691 7 ILP--ILIPVITAiLLIFLGKR--PIIQRYVALIGSLLTLVAAIIlvanVYKHGIQTLElgnwKAPFG------------ 70
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 73 ierlgisIHLAMDGLSLLMVALTGLLGVLSVLCSWNEI--QRRIGFFHLNLLWILGGVIGVFLAIDLFLFFFFWEMMLVP 150
Cdd:PRK07691 71 -------IVFVADMFAALLVLTSSIITFLVILYSFQTIgiERERYYYYPSVLFMLAGVNGAFLTGDIFNLFVFFEVMLMA 143
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 151 MYFLIALwghssdDGKKTRIYAATKFFIFTQASGLVMLVAILGLvfvnFNATGVITFDYATLLKTQLSPHVEWLL---ML 227
Cdd:PRK07691 144 SYVLIVI------GGTKIQLRESIKYVLINVVSSAFFVVAVAIL----YSVVGTLNMADISVKIAELSAGQTGLItvvAI 213
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 228 GFFVAFAVKMPVVPVHSWLPDAHAQAPTAGSVDLAGILLKTAAYGLIRFALPLFPNASAEFAPIAMWLGIIGIFYGALLS 307
Cdd:PRK07691 214 LFLFVFATKAGLFPLYFWLPGSYYAPPIAIAALFGALLTKVGVYAIARTFTLFFSHDTSFTHYLILILALLTIIFGVIGA 293
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 308 FAQTDIKRLVAYSSVSHMGFVMIGIYSGSQVALQGVVVQMIAHGLSAAALFILCGQLYERLHTRDMRKMGGLWSRMPYLp 387
Cdd:PRK07691 294 VAYFDIKKIIIYNIMIAVGVILVGVAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIKITGTTDLKKMGGLIKRYPVL- 372
|
410 420 430
....*....|....*....|....*....|.
gi 489188289 388 AISLFFASASL-GLPGTGNFVGEFLILIGAF 417
Cdd:PRK07691 373 GWMFFIAALSLaGIPPLSGFYGKFFIVEGTF 403
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
77-434 |
5.58e-32 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 129.85 E-value: 5.58e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 77 GISIHLAMDGLSLLMVALTGLLGVLSVLCSWNEIQRRIGFFHLNLLWILGGV-----IGVFLAIDLFLFFFFWEMMLVPM 151
Cdd:PRK08667 68 GLDITFHIDRLAAFFIILIGLVSLCVAIYSLGYNEHMSSNERANLLSALTALfilsmLGVVASANTFSFLFFWEIMALSS 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 152 YFLIaLWGHSSDDGKKTRIYaatkFFIFTQASGLVMLVAILGLvfvnFNATGviTFDYATLlktQLSPHVEWLLMLGFFV 231
Cdd:PRK08667 148 FFLV-MNDYQEEETQRAGIF----YFVMTQLSTVFLMLGIIVL----FIQTG--SFELSPL---GASAGILSLVFLLLFL 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 232 AFAVKMPVVPVHSWLPDAHAQAPTAGSVDLAGILLKTAAYGLIRFALPLfpnasaeFAPIAMW------LGIIGIFYGAL 305
Cdd:PRK08667 214 GFGIKAGIIPFHKWLPYAHPASPSNVSALMSGVMLKVAVYGLVRFLMDV-------LSPELWWgvlillAGSISALLGVI 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 306 LSFAQTDIKRLVAYSSVSHMGFVMIGI-------YSGSQ----VALQGVVVQMIAHGLSAAALFILCGQLYERLHTRDMR 374
Cdd:PRK08667 287 YALKEHDLKGLLAYSSIENIGIILMGIglyvifgVYGLDtlalLALGGALFHSLNHALFKSLLFLTAGSVVHATGTRNIE 366
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 489188289 375 KMGGLWSRMPYLPAISLFFASASLGLPGTGNFVGEFLILIGAFKVVPV---------IIVIATFGLVFA 434
Cdd:PRK08667 367 KMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLYESFFQSFSVadplikillFSVLAIFALTSA 435
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
76-436 |
1.48e-31 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 128.09 E-value: 1.48e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 76 LGISIHLA-MDGLSLLM---VALTGLLGVLSVLCSWNEIQRRIGFFHLnllwilGGVIGVFLAIDLFLFFFFWEMMLVPM 151
Cdd:PRK12668 56 LGFDLVLGrVDKLSRVFgliFGIMAFIGVIYALHVKDPGQHVAALLYV------GSALGAVFAGDLLTLFVFWELMAFTS 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 152 YFLIalWGHssddGKKTRIYAATKFFIFTQASGLVMLVAILGLVFvnfnATGVITFDYATLLKTQLSphveWLLMLGFfv 231
Cdd:PRK12668 130 TFLV--WAR----GTKAAVRAGFRYLLVHVLGGVLLLAGILLHYA----ETGSFAFGAIAGLGGTAA----WLILIGF-- 193
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 232 afAVKMPVVPVHSWLPDAHAQAPTAGSVDLAGILLKTAAYGLIRfalpLFPNAsaefaPIAMWLGIIGIFYGALLSFAQT 311
Cdd:PRK12668 194 --GVNAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALAR----AFPGT-----ELLIYIGAAMAVYGVFFALLEN 262
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 312 DIKRLVAYSSVSHMGFVMIGIYSGSQVALQGVVVQMIAHGLSAAALFILCGQLYERLHTRDMRKMGGLWSRMPyLPAISL 391
Cdd:PRK12668 263 DLRRLLSYHIVSQVGYMVAGIGIGTALAINGAVAHAFNHILYKGLLFMSAGAVLYRTGTEKLTELGGLYRSMP-LTALFC 341
|
330 340 350 360
....*....|....*....|....*....|....*....|....*.
gi 489188289 392 FFASASL-GLPGTGNFVGEFLILIGAFkvvPVIIVIATFGLVFASV 436
Cdd:PRK12668 342 LVGALSIsAFPLFSGFVSKSMIISAAG---EDHYVWVWLLLLLASA 384
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
82-490 |
2.76e-31 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 126.09 E-value: 2.76e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 82 LAMDGLSLLMVALTGLLGVLSVLCSWNEIQRRIG--FFHLNLLWILGGVIGVFlAIDLFLFFFFWEMMLVPMYFLIALWG 159
Cdd:PRK05777 69 LVVDGFALFLKGLILLASLLALLLARPYLEDRGRgeFYLLVLFALLGMMVMVS-ANDLLTLFLGLELLSLPLYALAALRR 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 160 hssDDGKKTRiyAATKFFIFTQASGLVMLvaiLGLVFVnFNATGVITFDyATLLKTQLSPHVEWLLMLGF---FVAFAVK 236
Cdd:PRK05777 148 ---DRRRSLE--AAIKYFVLGALASGFLL---YGMSLL-YGATGSLSFA-GIAKALADGSGNSLLLLFGLvflLVGLAFK 217
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 237 MPVVPVHSWLPDAHAQAPTAGSVDLAGILlKTAAYG-LIRFALPLFPNASAEFAPIAMWLGIIGIFYGALLSFAQTDIKR 315
Cdd:PRK05777 218 LSAVPFHMWTPDVYEGAPTPVTAFLATAP-KIAAFAvLLRLLVVAFGGLSEDWQQVLAIIAIASMLVGNLAALSQTNIKR 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 316 LVAYSSVSHMGFVMIGIYSGSQVALQGVVVQMIAHGLSAAALFILCGQLYER-LHTRDMRKMGGLWSRMPYLPAISLFFA 394
Cdd:PRK05777 297 LLAYSSIAHAGYLLVGLAAGTAEGYSAVLFYLLAYLFMTLGAFGVISLLRRKgGEAESISDFAGLSKRSPLLAAVMTIFM 376
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 395 SASLGLPGTGNFVGEFLILIGAFKV-VPVIIVIATFGLVFASVYSLIMIHRAYFGPSQSDEPILGLDARELSMVLGLAVL 473
Cdd:PRK05777 377 LSLAGIPPTAGFWGKFYVFEAAVEAgLWWLAVIGVLNSAIGAFYYLRVIKLMYFDEPPRDAPVNWPLSAGGAVLSVSALL 456
|
410
....*....|....*..
gi 489188289 474 LVLLGVYPQPVLDISAA 490
Cdd:PRK05777 457 VLVLGIFPQPLLDLAAQ 473
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
1-430 |
7.76e-31 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 124.68 E-value: 7.76e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 1 MILPWLILIPFIGGFLCWIAEHSSKTLPRWIALLSM--TLVLILSLwiwATGDFQLAPapggepewtlqfkvlwierlGI 78
Cdd:PRK07234 3 SLTPVWIALPFLLGFAIYLLPKLDRNLALGMAIVSAvyALGLVASM---VPLELTLLD--------------------NF 59
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 79 SIHLAMDGLSLLMVALTGLLGVLSVLCSWNEIQRRigfFHLNLLWILGGVIG-VFLAIDLFLFFFFWEMMLVPMYFLIAl 157
Cdd:PRK07234 60 GVTLRADALSGYFILTNALVTLAVIFYCWESAKTR---FFYAQLLILHGSVNaAFVCADLISLYVALEVLSIATFLLVA- 135
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 158 wghssDDGKKTRIYAATKFFIFTQASGLVMLVAIlGLVFVnfnATGviTFDYATLlkTQLSPHVEWLLMLGFfvafAVKM 237
Cdd:PRK07234 136 -----YPRTDRAIWVGLRYLFYSNVAMLFYLIGA-VLVYQ---ANG--TFAFSGL--ATADPEAFALIALGL----LVKG 198
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 238 PVVPVHSWLPDAHAQAPTAGSVDLAGILLKTAAYGLIRFALPLFpnasaEFAPIAMWLGIIGIFYGALLSFAQTDIKRLV 317
Cdd:PRK07234 199 GIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVP-----GLDLIVRIFGVGTALLGVLFALLEKDLKRML 273
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 318 AYSSVSHMGFVMIGIYSGSQVALqgvvvqmiAHGLSAAALFILCGQLYERLHTRDMRKMGGLWSRMPylpaisLFFASAS 397
Cdd:PRK07234 274 AFSTISQLGFILAAPLVGGLYAL--------AHGLVKSTLFLCAGALPSRNFTELISQMLGIGKWIP------LTMASFS 339
|
410 420 430
....*....|....*....|....*....|....
gi 489188289 398 L-GLPGTGNFVGEFLILIGAFKVVPVIIVIATFG 430
Cdd:PRK07234 340 IaGFPLLAGFVSKVLTLKNLLPWQAIALNLAAVG 373
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
2-494 |
3.16e-30 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 123.52 E-value: 3.16e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 2 ILPwlILIPFIGGFLCWIAEHSSKtLPRWIALLSMTLVLILSLWIWA--------TGDFQLAPAPGGepewtlqfkvlwi 73
Cdd:PRK12663 7 ILP--MLLPLLCGLVLVFLRNRDR-LQRYLAIGTLTILTLISLALLIyvqrhgpiTLDFGGWLPPFG------------- 70
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 74 erlgisIHLAMDGLSLLMVALTGLLGVLSVLCSW---NEIQRRIGFFHLnLLWILGGVIGVFLAIDLFLFFFFWEMMLVP 150
Cdd:PRK12663 71 ------IQFTGDSLSALMVTTASFVATAIMAYGFgdiEHSGRRYGFPPF-ILLLMAGVIGSFLTGDLFNLYVWFEVMLIA 143
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 151 MYFLIALwghssdDGKKTRIYAATKFFIFTQASGLVMLVAIlGLVFVNFNatgviTFDYATL-LKTQLSPHVEWLLMLG- 228
Cdd:PRK12663 144 SFVLITL------GQEREQLRGAIKYVVLNLIGSWLFLLGI-GLLYGTFG-----TLNMAHIaMRLNDMGDTATLTTIAl 211
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 229 -FFVAFAVKMPVVPVHsWLPDAHAQAPTAGSVDLAGILLKTAAYGLIRFALPLFPNASAEFAPIAMWLGIIGIFYGALLS 307
Cdd:PRK12663 212 lFLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFPQERELLHPLLATMAAITMVIGALGA 290
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 308 FAQTDIKRLVAYSSVSHMGFVMIGIYSGSQVALQGVVVQMIAHGLSAAALFILCGQLYERLHTRDMRKMGGLWSRMPYLP 387
Cdd:PRK12663 291 LAYKDIRRIAGYQVISSIGFILLGLALGTPAGINGAIFYLVHDMVVKTALFLIAGSLVRLTGYRSLQYLGGLYRKEPLFG 370
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 388 AISLFFASASLGLPGTGNFVGEFLILIGAFKVVPVIIVIATFGLVFASVYSLIMIHR-AYFGPSQSDE-PILGLDARELS 465
Cdd:PRK12663 371 ALFLILIFAIGGLPPFSGFWGKVLLVQGALDNGAYILLALMLITSLITMYSLFRIFFlAYWGDKDGEEvNFKPIPLYRKL 450
|
490 500
....*....|....*....|....*....
gi 489188289 466 MVLGLAVLLVLLGVYPQPVLDISAASMHG 494
Cdd:PRK12663 451 PLSILAVVVIAMGIAAEPLLNLTQDAAEG 479
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
2-408 |
3.73e-30 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 123.54 E-value: 3.73e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 2 ILPWLILIPFIGGFLCWIAEHSSKtLPRWIALLSMTLVLILSLWIWATGDFQ--LAPAPGGepewtlqfkvlWIERLGIS 79
Cdd:PRK12665 4 LAPLPVLLPLLAAALTLVLGRRPR-AQRAISLLALSAVLVLSAVLLYLVDRDgtQAVQLGG-----------WDAPIGIT 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 80 ihLAMDGLSLLM--VALTGLLGVLsvlcsWNEIQRRI---------GFFHLNLLWILGGVIGVFLAIDLFLFFFFWEMML 148
Cdd:PRK12665 72 --LVVDRLSALMlvVSSVVLLAVL-----VYAIGQGIrdgdeeqpvSIFLPTYLILVAGVSNAFLAGDLFNLYVGFEILL 144
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 149 VPMYFLIALwghssdDGKKTRIYAATKFFIFTQASGLVMLVAIlGLVFVnfnATGVITFDYATLLKTQLSPHVEWLLMLG 228
Cdd:PRK12665 145 VASYVLLTL------GATAARVRAGVTYVMVSMVSSLLFLIGI-ALVYA---ATGTLNMADLAVRLDELPSGTRTALFAV 214
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 229 FFVAFAVKMPVVPVHSWLPDAHAQAPTAGSVDLAGILLKTAAYGLIRFALPLFPnaSAEFAPIAMWLGIIGIFYGALLSF 308
Cdd:PRK12665 215 LLVAFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLLFP--GGGLDTLLMVVALLTMVVGILGAI 292
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 309 AQTDIKRLVAYSSVSHMGFVMIGIYSGSQVALQGVVVQMIAHGLSAAALFILCGQLYERLHTRDMRKMGGLWSRMPYLPA 388
Cdd:PRK12665 293 AQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVVGLIERQAGSSSLRRLGGLAKASPLLAV 372
|
410 420
....*....|....*....|..
gi 489188289 389 isLFFASA-SL-GLPGTGNFVG 408
Cdd:PRK12665 373 --LFFVPAlNLgGIPPFSGFIG 392
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
1-455 |
1.07e-29 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 123.76 E-value: 1.07e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 1 MILPWLILIPFIGGFLCWIAEHSSKTLPRWIALLSMTLVLILSLWiwatgdfqLAPAP-GGEpewTLQFKVLWIERLGIS 79
Cdd:PRK12648 1 MSLLLLVLLPFLGALLAALLPRNARNAEAWLAGLVALAALVLLAL--------LYPAVaAGE---VIRAEIEWLPALGLN 69
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 80 IHLAMDGLSLLMVALTGLLGVLSVLCSWNEIQRR--IGFFHLNLLWILGGVIGVFLAIDLFLFFFFWEMMLVPMYFLIAL 157
Cdd:PRK12648 70 LSLRLDGLAWLFALLILGIGLLVVLYARYYLSPAdpVPRFFSFLLLFMGAMLGIVLSGNLILLVVFWELTSLSSFLLIGY 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 158 WGHSSDDGKKTRIYaatkfFIFTQASGLVMLVAILGLVFVnfnatgVITFDYATLL----KTQLSPHVEWLLMLGFFVAF 233
Cdd:PRK12648 150 WHHRADARRGARMA-----LTVTGAGGLALLAGVLLLGHI------VGSYDLDVVLaagdLIRAHPLYPPALVLILLGAF 218
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 234 AvKMPVVPVHSWLPDAHAqAPTAGSVDL-------AGILLktaaygLIRFAlPLFPNASAEFAPIAMwLGIIGIFYGALL 306
Cdd:PRK12648 219 T-KSAQFPFHFWLPHAMA-APTPVSAYLhsatmvkAGVFL------LARLW-PVLAGTEEWFWIVGG-AGLITLLLGAYF 288
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 307 SFAQTDIKRLVAYSSVSHMGFV--MIGIysGSQVALQGVVVQMIAHGLSAAALFILCGQLYERLHTRDMRKMGGLWSRMP 384
Cdd:PRK12648 289 ALFQHDLKGLLAYSTISHLGLItlLLGL--GSPLAAVAAIFHIINHATFKASLFMAAGIIDHETGTRDMRRLSGLRRLMP 366
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 489188289 385 YLPAISLFFASASLGLPGTGNFV------GEFLILIGAFKVVPVIIVIATFGLVFASVYSLIMIHRAYFGPSQSDEP 455
Cdd:PRK12648 367 ITATLAMVAAAAMAGVPLLNGFLskemffAETLDTHLLGSLDWLLPVAATLAGAFSVAYSLRFIHDVFFGPPPDDLP 443
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
55-439 |
3.03e-29 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 122.34 E-value: 3.03e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 55 APAPGGEPEWTLQfkvlWIERLGISIHLAMDGLSLLMVALTGLLGVLSVL-CSW--NEIQRRIGFFHLNLLWILGGVIGV 131
Cdd:PRK12644 47 AVLAGGAPTEVVP----WIPSLGLDLAFRLDALAALMSLLVLGVGALVLLyCARyfDDDEPRLGRFAAELVAFAGAMFGL 122
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 132 FLAIDLFLFFFFWEMMLVPMYFLIalwGHSSDdgKKTRIYAATKFFIFTQASGLVMLVAILGLVfvnfNATGviTFDYAT 211
Cdd:PRK12644 123 VTSDNLLLLYVFWELTTVLSFLLI---GHYAE--RAASRRAALQALLVTTAGGLAMLVGIIILG----QAAG--TYRLSE 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 212 LLKTQL-SPHVEWLLMLgFFVAFAVKMPVVPVHSWLPDAHAqAPTAGSVDL-AGILLKTAAYGLIRFAlPLFpNASAEFA 289
Cdd:PRK12644 192 LLADPPtGPAVSVAVVL-ILVGALSKSAIVPFHFWLPGAMA-APTPVSAYLhAAAMVKAGIYLVARLA-PGF-ADVPVWR 267
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 290 PIAMWLGIIGIFYGALLSFAQTDIKRLVAYSSVSHMGFVMIGIYSGSQVALQGVVVQMIAHGLSAAALFILCGQLYERLH 369
Cdd:PRK12644 268 PTVLVLGLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLAMLLAHALFKAALFLVVGIIDHSTG 347
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 489188289 370 TRDMRKMGGLWSRMPYLPAISLFFASASLGLPGTGNFVG-----EFLILIGAFKVV-PVIIVIATFGLVFASVYSL 439
Cdd:PRK12644 348 TRDIRKLSGLGRRQPVLAVVAALAAASMAGLPPLLGFVAkeaalEAVLHDGALGPAgPVVLAGIVLGSILTVAYSL 423
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
72-449 |
2.16e-28 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 119.64 E-value: 2.16e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 72 WIERLGISIHLAMDGLSLLMVALTGLLGVLSVL--CSWNEIQRRIGFFHLNLLWILGGVIGVFLAIDLFLFFFFWEMMLV 149
Cdd:PRK12647 50 WVPSLGVNLSFLLDGLSLTFALLITGIGTLIVLyaGGYLKGHPDLGRFYSYILLFMASMLGLVLSDNLITLFVFWELTSI 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 150 PMYFLIalwGHSSDDGKKTRiyAATKFFIFTQASGLVMLVAILGLvfvnFNATGviTFDYATLLKT----QLSPHVEWLL 225
Cdd:PRK12647 130 TSFLLI---GFNHEREAARR--AALQALLVTGGGGLALLAGLILL----GNVTG--TYSLSELLASgdviREHPLYLAIL 198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 226 MLGFFVAFAvKMPVVPVHSWLPDAHAqAPTAGSVDL-AGILLKTAAYGLIRFalplfpNASAEFAPIAMWL----GIIGI 300
Cdd:PRK12647 199 LLVLGGAFT-KSAQFPFHFWLPNAME-APTPVSAYLhSATMVKAGIYLLARL------NPVLGGTPLWQTIlplfGGLTM 270
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 301 FYGALLSFAQTDIKRLVAYSSVSHMGFVMIGIYSGSQVALQGVVVQMIAHGLSAAALFILCGQLYERLHTRDMRKMGGLW 380
Cdd:PRK12647 271 LTGALLAVRQTDLKLILAYSTVSALGTLVMLLGLGSELAIKAAVLFLVAHSLYKGALFMVAGIIDHETGTRDITKLGGLR 350
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 489188289 381 SRMPYLPAISLFFASASLGLPGTGNFVGEFLI---LIGAFKVVPVIIVIATFGLVFASVYSLIMIHRAYFGP 449
Cdd:PRK12647 351 RAMPITAAAALLAALSMAGLPPLFGFLAKELIyeaLLEAPLWSLILTVAAVLGNALMVAVAFLVGIKPFLGK 422
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
54-439 |
6.21e-28 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 118.22 E-value: 6.21e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 54 LAPAPGGEPEWTLQFKVLWIERL---GISIHLA--MDGLSLLMVALTGLLG--VLSVLCSWNEIQRRIGFFHLNLLWILG 126
Cdd:PRK12650 42 LKELPPILDGDALTWSVTWIPDLlgnGVDVNLAlrADALSLFFALLALVIGavVFIYSARYLPRKKGNTSFYLLMTAFMA 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 127 GVIGVFLAIDLFLFFFFWEMMLVPMYFLIALWGHSSDDGkktriyaATKFFIFTQASGLVMLVAILGLVfvnfNATGVIT 206
Cdd:PRK12650 122 AMLLLVLADDVVVLFVAWELVSLASFFLIARSGSGGEAG-------SIRTLILTFFGGLTLLAAVAIAA----TQTGTTS 190
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 207 FDyATLLKTQLSPHVEWLLMLGFFVAFAV--KMPVVPVHSWLPDAHAQAPTAGSVDLAGILLKTAAYGLIRFalplfpna 284
Cdd:PRK12650 191 LS-GILHSDVWAEKPGLTTVVAVLIAVAAftKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRF-------- 261
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 285 SAEFAPIAMW---LGIIGIF---YGALLSFAQTDIKRLVAYSSVSHMGFVMIGIYSGSQVALQGVVVQMIAHGLSAAALF 358
Cdd:PRK12650 262 SPVFHDVAVWnwlLIIVGMItalMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLF 341
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 359 ILCGQLYERLHTRDMRKMGGLWSRMPYLPAISLFFASASLGLPGTGNFVGE------FLILIGAFKVVPVIIVIATFGLV 432
Cdd:PRK12650 342 MLIGVVDHQAGTRDIRRLGSLWRRMPFTFVSVTIAALSMAAVPPLFGFVSKegmltaFLEAPGGNAGVVLLLVGAALGAV 421
|
....*..
gi 489188289 433 FASVYSL 439
Cdd:PRK12650 422 FTFAYSA 428
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
75-446 |
1.06e-27 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 116.01 E-value: 1.06e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 75 RLGISIHLAMDGLSLLMVALTGLLGVLSVLCSWNEIQ----------RRIGFFHLNLLWILGGVIGVFLAIDLFLFFFFW 144
Cdd:PRK08676 52 YFMESRYLFIDHLGIFVVLIASVVFILAALYARGYVDhllsngeldpENLKVFYLGFNLLLSVITFAFFSDNLALFWIFA 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 145 EMMLVPMYFLIALWGhssddgKKTRIYAATKFFIFTQASglvMLVAILGLVF---VNFNATGVITFDYATL--LKTQLSP 219
Cdd:PRK08676 132 ELTTVFSAMLIAILS------ARENIDAALKYIFIASTA---MIFAFIGLIFlfsLTRQALGTGTLNWTELaaHASLLSP 202
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 220 HVEWLLMLGFFVAFAVKMPVVPVHSWLPDAHAQAPTAGSVDLAGILLKTAAYGLIR-FALPLFPNASAEFAPIAMWLGII 298
Cdd:PRK08676 203 SVLGASFLFIFIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRlSALLRQSGAAEQFSNVLIGLGIF 282
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 299 GIFYGALLSFAQTDIKRLVAYSSVSHMGFVMIGIYSGSQVALQGVVVQMIAHGLSAAALFILCGQLYeRLHTRDMRKMGG 378
Cdd:PRK08676 283 SIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLFFSAGILH-RQYRSDRFDRIF 361
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 489188289 379 LWSRMPYLPAISLFFASASL-GLPGTGNFVGEFLILIGAFKVVPVIIVIATFGLVFASVYSLIMIHRAY 446
Cdd:PRK08676 362 DVFRLQPVAAWGVILGSAAIiGMPPFPLFLSKFFILLQLGGISVWLVLAVLLLLLLAASSFAIFLLKAF 430
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
72-454 |
1.24e-26 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 114.25 E-value: 1.24e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 72 WIERLGISIHLAMDGLSLLMVALTGLLGVLSVLCS---WNEIQRRIGFFHLNLLWILGGVIGVFLAIDLFLFFFFWEMML 148
Cdd:PRK12645 64 WIPSLGINFTLYVDGLSLLFALLITGIGSLVVLYSiyyLSKKKEQLGNFYVYLLLFMGAMLGVVLSDNLIVLYLFWELTS 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 149 VPMYFLIALWGHssddgKKTRIYAATKFFIFTQASGLVMLVAI--LGLVFVNFNATGVItfdyATLLKTQLSPHVEWLLM 226
Cdd:PRK12645 144 ISSFLLISYWYE-----REASRYGAQKSMLITVFGGLSMLGGFilLYIMTGSFSIREMI----ANADEIQNSPLFIPAMI 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 227 LGFFVAFAvKMPVVPVHSWLPDAhAQAPTAGSVDL-AGILLKTAAYGLIRFAlPLFpNASAEFAPIAMWLGIIGIFYGAL 305
Cdd:PRK12645 215 LILLGAFT-KSAQFPFYIWLPDA-MEAPTPVSAYLhSATMVKAGIYLVARFT-PIF-AGSQVWFWTVTLVGLITLFWGSL 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 306 LSFAQTDIKRLVAYSSVSHMGFVM--IGI------YSGSQ-----VALQGVVVQMIAHGLSAAALFILCGQLYERLHTRD 372
Cdd:PRK12645 291 NAVKQTDLKGILAFSTVSQLGLIMslLGIgaaslhYQGDDskiyaAAITAAIFHLINHATFKGSLFMIVGIVDHETGTRD 370
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 373 MRKMGGLWSRMPYLPAISLFFASASLGLPGTGNFVGEFLILIGAFKVVPV-----------IIVIATFGLVFASVYSLIM 441
Cdd:PRK12645 371 IRKLGGLMTIMPITFTIALIGALSMAGLPPFNGFLSKEMFFESMLNATEAnlfsldtwgvlFPVIAWVASVFTFVYSIIF 450
|
410
....*....|...
gi 489188289 442 IHRAYFGPSQSDE 454
Cdd:PRK12645 451 IFKTFFGKYKPEQ 463
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
1-454 |
6.36e-24 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 105.44 E-value: 6.36e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 1 MILPWLILIPFIGG-FLCWIAEHSSKTLPRWIALLSMTLVLILSLWIWatgdFQLAPAPGGEPEWTLQFKVLWIERLGIS 79
Cdd:TIGR01974 1 NLIFLIVFLPLIGFlIAGLFGRRIGERVSGIIGIGSVGLSAALSAFVF----VDFFLNGEGEAFTQSLFPWISVGGFQVD 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 80 IHLAMDGLSLLMVALTGLLGVLSVLCSW---NEIQRRIGFFHLNLLWILGGVIGVfLAIDLFLFFFFWEMMLVPMYFLIA 156
Cdd:TIGR01974 77 FGLRLDGLSLTMLVVVTGVGSLVHIYSIgymAHDEGYSRFFAYLNLFTFSMLMLV-LADNFLQLFFGWEGVGLCSYLLIG 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 157 LWGHssddgKKTRIYAATKFFIFTQASGLVMLVAILgLVFVNFNatgviTFDYATLLktQLSPHVEWLLM----LGFFVA 232
Cdd:TIGR01974 156 FWYK-----KPSANNAAIKAFVVNRVGDFGLLLGIF-LIFWYFG-----TLNFQEVF--ALAPGAFFSALtlicLLLFIG 222
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 233 FAVKMPVVPVHSWLPDAHAqAPTAGSVDLAGILLKTAAYGLIRFALPLFpnasaEFAPIAM-WLGIIG---IFYGALLSF 308
Cdd:TIGR01974 223 AMGKSAQLPLHTWLPDAME-GPTPVSALIHAATMVTAGVYLVARTSPLF-----ELSPTALyLVTIIGaitALFAATVAL 296
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 309 AQTDIKRLVAYSSVSHMG--FVMIGIySGSQVALqgvvVQMIAHGLSAAALFILCGQLYERLH-TRDMRKMGGLWSRMPy 385
Cdd:TIGR01974 297 VQNDIKRILAYSTMSQLGymFLALGV-GAYAAAI----FHLMTHAFFKALLFLGAGSVIHAMHhEQDIRKMGGLRKKMP- 370
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 489188289 386 LPAISLFFASASL-GLPGTGNFVGEFLILIGAFKVVPVII--VIATFGLVFASVYSLIMIHRAYFGPSQSDE 454
Cdd:TIGR01974 371 VTYITFLIGSLALiGFPGFAGFFSKDLILEAAFASGTHSFlfVAGLIGAFLTAFYSFRLIFMVFHGKERHEA 442
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
7-449 |
1.71e-23 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 103.13 E-value: 1.71e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 7 ILIPFIGGFLCWIAEHSSKTLPRWIALLSMTLVLILSLWIWATGDFQLAPAPGgepewtlqFKVLWIERLGISIHlAMDG 86
Cdd:PRK06525 8 LLLPFIGALVVFFLPGRRAAELGVLFAALTTLCMLSLAYAFYQAGKVAVTLTL--------VNLGDVALFGLVID-PVSV 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 87 LSLLMVALTGLL------GVLSVLCSWNEIQRRIGFFHLNLLWILGGVIGVFLAIDLFLFFFFWEMMLVpmyfliALWGH 160
Cdd:PRK06525 79 LIGFVVVLLGLLvtlystGYMSPGNREHPVHEGTGRYYAFLLLFIGAMAGLVYSSTLLGLLLFFEITGL------CSWAL 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 161 SSDDGKKTRIYAATKFFIFTQASGLVMLVAiLGLVFVNFNatgviTFDYATLlkTQLSPHVEWLLMLGFFVAFAVKMPVV 240
Cdd:PRK06525 153 ISYYQSPKALRSALKALLITHIGSLGLYLA-AATLFLQTG-----TFALSAL--SGLHGSLKYLVFLGILFAAWGKSAQL 224
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 241 PVHSWLPDAHAqAPTAGSVDL-AGILLKTAAYGLIRFALPLFPnASAEFAPIAMWLGIIGIFYGALLSFAQTDIKRLVAY 319
Cdd:PRK06525 225 PFYSWLPDAME-APTPASAYLhAASMVKVGVYIFARAIQSMGP-IPHVIGYVGAVMAIVTLLYGFLMYLPQQDMKRLLAY 302
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 320 SSVSHMGFVMIGI-YS--GSQVALQGVVVQMIAHGLSAAALFILCGQLYERLHTRDMRKMGGLWSRMPyLPAISLFFASA 396
Cdd:PRK06525 303 STITQLGYMFFGLsLAilGSRLALEGSIAYIFNHAFAKSLFFLVAGALSYSCGTRLLPRLRGVLKKLP-LVGVGFCVAAL 381
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 397 SL-GLPGTGNFVGEFLILIGAF--KVVPVIIVIATFGLVFASV----YSLIMIHRAYFGP 449
Cdd:PRK06525 382 AItGVPPFNGFFSKFPIFAAGFelSVEYWILLPAMVLLLIESVasfaWFLRWFGRVVFGE 441
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
80-454 |
7.40e-23 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 101.35 E-value: 7.40e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 80 IHLAMDGLSLLMVALTGLLGVLSVLCSWNEIQRRI------GFFHLNLLwILGGVIGVFLAIDLFLFFFFWEMMLVPMYF 153
Cdd:PRK12662 70 IELRVDILSATMLVLVNFIAVMSVLYGIYPNRKEIsvnkipSFYSAFLL-CLGGLLGILVSNDVFNIYVFLEISSISSYV 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 154 LIALWGHssddgkKTRIYAATKFFIFTQASGLVMLVAILGLvfvnFNATGVITF-DYATLLKTQLSPHVEWLLMLGFFVA 232
Cdd:PRK12662 149 LVAMGRD------KKALVAAFEYLIIGTIGATFYLIGIGFL----YAITGTLNMgDMFLIIQDLPTNRAIQIGVLFIMVG 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 233 FAVKMPVVPVHSWLPDAHAQAPTAGSVDLAGILLKTAAYGLIRFALPLFPN----ASAEFAPIAMWLGIIGIFYGALLSF 308
Cdd:PRK12662 219 LFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVYDVFKAnfvfTTLPFNNVFMILAALAIVFGSVLAI 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 309 AQTDIKRLVAYSSVSHMGFVMIGIYSGSQVALQGVVVQMIAHGLSAAALFILCGQLYERLHTRDMRKMGGLWSRMPYLPA 388
Cdd:PRK12662 299 LSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSISYHFGTTKLEDCLNLWKSMPKITL 378
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 489188289 389 ISLFFASASLGLPGTGNFVGEFLILIGAFKVVPVI-IVIATFGLVFASVYSLIMIHRAYFGPSQSDE 454
Cdd:PRK12662 379 AFVLLSLSLIGMPPTSGFVAKWYILDAFIKSNAWIgLVVLLVGSGLSVIYVWKIVEALYFESRMVES 445
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
65-453 |
8.76e-23 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 102.21 E-value: 8.76e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 65 TLQFKVLWIERLGISIHLAMDGLSLLMVALTGLLGVLSVLCSWNEIQRR--IGFFHLNLLWILGGVIGVFLAIDLFLFFF 142
Cdd:PRK12649 59 IITGSISWLPSAGVEFSIYADGLAVLIGLIASGIGVIIMSYSNGYMSHKedLPRYYQYLLLFMGSMIGMVFSGNTIQLFI 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 143 FWEMMLVPMYFLIALWGHssddgKKTRIYAATKFFIFTQASGLVMLVAILGLvfvnFNATGviTFDYATLLK-----TQL 217
Cdd:PRK12649 139 FWELTSITSFMLIGYWRH-----RPESVYGATKSLLITAGGGLFMFAGFLLL----HVITG--TYDIATILQdseliENI 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 218 SPHVEWLLMLGF-FVAFAVKMPVVPVHSWLPDAhAQAPTAGSVDLAGILLKTAAYGLIRFALPLFPNASAEFAPIAmWLG 296
Cdd:PRK12649 208 KGHPLFLITLILiFIGAAAKSAQGPFYIWLPNA-MEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTEAWFILVS-GTG 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 297 IIGIFYGALLSFAQTDIKRLVAYSSVSHMGFVMI----GIYSGSQVALQGVVVQMIAHGLSAAALFILCGQLYERLHTRD 372
Cdd:PRK12649 286 MITMVLAGFLAFRQTDIKAILAYSTISQLAYLMTmygyTTYHEPGLGVAAATFHLLNHATFKACLFLVAGIVAHEAATRD 365
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 373 MRKMGGLWSRMPYLPAISLFFASASLGLPGTGNFVG-----EFLILIGAFKVVPVIIVI---ATFGLVFASVYSLIMIHR 444
Cdd:PRK12649 366 IRKLGGLRKEMPITFIVASIAALAMAGIPPLNGFLSkemfyETSVEMGALIGGPFTIIIpavAVLGGVFTFAYSIKLIDG 445
|
....*....
gi 489188289 445 AYFGPSQSD 453
Cdd:PRK12649 446 IFLGERTHD 454
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
67-447 |
2.81e-22 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 99.89 E-value: 2.81e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 67 QFKVLWIERLGISIHLamDGLSLLMVALTGLLGVLSVLCSWNEIQR-------RIGFFHLNLLwilggVIGVFLAI--DL 137
Cdd:PRK06589 66 QFELMDFGNYSIGLHL--EPLGLIFLLLIGFLWICALLYTPKYLAInnidsssRFLFFFNLTI-----LIGVLIALssDL 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 138 FLFFFFWEMMLVPMYFLIalwGHSSDDGKKTRIYaatKFFIFTQASGLVMLVAILGLVFvnfNATGVITFDYATLLKTQL 217
Cdd:PRK06589 139 FTMFVCYELLTISTAFLI---GHTRNNISLSGGY---KYLKILMISALLLFLPAVILIY---TKTGNLDFVSGGLFSKNQ 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 218 SphvewLLMLGFFVAFAVKMPVVPVHSWLPDAHAQAPTAGSVDLAGILLKTAAYGLIRFALPLFPNASA-EFAPIAMWL- 295
Cdd:PRK06589 210 S-----IILLLMFIYGIAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYIFGLSYLqRIFAEFNWLi 284
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 296 --GIIGIFYGALLSFAQTDIKRLVAYSSVSHMGFVMIGIYSGSQVALQGVVVQMIAHGLSAAALFILCGQLYERLHTRDM 373
Cdd:PRK06589 285 fiPIVSIFYSSLKALKTDNIKKILAYSTISQLSLALLSAFILTPKALGAAILHLVSHSFAKICLFYSMGSIYSLKKEDQV 364
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 374 RKMGGLWSRMPYLPAISLFFASASLGLPGTGNFVGEFLILIGAF-------KVVPVIIVIATfgLVFASVYSLIMIHRAY 446
Cdd:PRK06589 365 DKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASeqnqpwlSIIVMLVVIAS--SILSALYLLKILSSIY 442
|
.
gi 489188289 447 F 447
Cdd:PRK06589 443 K 443
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
1-442 |
3.28e-22 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 99.92 E-value: 3.28e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 1 MILPwlILIPFIGGFLCWIAEHSSKTLPRWIALLSMTLVLILSLWIwatgdfqLAPAPGGEPEwtlqfkvlwIERLG--- 77
Cdd:PRK12666 8 IILP--ILLPLLTAALLLLLDERRRRLKRAISLASTLLLLAVAVAL-------LASAAAGGIG---------VYLLGnwp 69
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 78 --ISIHLAMDGLSLLMVALTGLLGVLSVLCSWNEIQRRIGFFHLNLLWILGGVIGVFLAIDLFLFFFFWEMMLVPMYFLi 155
Cdd:PRK12666 70 apFGIVLVLDRLSALMLLLTALLALAALLYALAGWDRAGPHFHALFQFQLMGLNGAFLTGDLFNLFVFFEVLLAASYGL- 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 156 ALWGhssddGKKTRIYAATKFFIFTQASGLVMLVAiLGLVFvnfNATGVITF-DYATLLKtQLSPHVEWLLMLG---FFV 231
Cdd:PRK12666 149 LLHG-----SGRARVRAGLHYVAINLVASSLFLIG-VGLIY---GVTGTLNMaDLAQRIA-QLPAADRALLEAGaalLLV 218
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 232 AFAVKMPVVPVHSWLPDAHAQAPTAGSVDLAgILLKTAAYGLIRFALPLFPNASAEFAPIA----MWLGIIGIFYGALLS 307
Cdd:PRK12666 219 VFLIKAAMWPLNFWLPPAYAAASAPVAALFA-IMTKVGIYAILRLSTLLFGPEAGASAGFGqdwlLPGGLATLAFGAIGV 297
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 308 FAQTDIKRLVAYSSVSHMGFVMIGIYSGSQVALQGVVVQMIAHGLSAAALFILCGqLYER--------------LHTRDM 373
Cdd:PRK12666 298 LAAQRLRRLAAYLVLVSSGTLLAAIGLGNPAATAAALYYLVHSTLAAAALFLLAD-LVERqrgaaadrlavtpeLYDLDE 376
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 489188289 374 RKMGGLWSRMPYLPAI--SLFFASASL--GLPGTGNFVGEFLILIGAFKVVPVIIVIATFGLVFASvySLIMI 442
Cdd:PRK12666 377 EEEEEVGVAIPATMALlgLLFFICALAlaGLPPLSGFLGKFALLQALLNPPGAGAAWWLWALVLLS--GLAAL 447
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
66-452 |
1.34e-21 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 98.67 E-value: 1.34e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 66 LQFKVLWIERLGISIHLAMDGLSLLMVALTGLLGVLSVLCSWNEIQRR---IGFFHLNLLWILGGVIGVFLAIDLFLFFF 142
Cdd:PRK12646 58 LSTSIPWMKTLDINLDLRLDGLSLMFSLIISLIGIAVFFYATQYLSSRkdnLPRFYFYLTLFMFSMIGIVLSDNTILMYV 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 143 FWEMMLVPMYFLIALWGHSSDDGkktriYAATKFFIFTQASGLVMLVAILGLVFVN-FNATGVITFDYATLLKTQLSPHV 221
Cdd:PRK12646 138 FWELTSVSSFLLISYWYNNGDSQ-----FGAIQSFMITVFGGLALLVGFIMLYIMTgTNNITEILGQADHIKNHGLFIPM 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 222 EWLLMLGFFVafavKMPVVPVHSWLPDAHAqAPTAGSVDL-AGILLKTAAYGLIRFAlPLFpNASAEFAPIAMWLGIIGI 300
Cdd:PRK12646 213 IFMFLLGAFT----KSAQFPFHIWLPRAMA-APTPVSAYLhSATMVKAGIFLLFRFT-PLL-GLSNMYIYIVTFVGLITM 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 301 FYGALLSFAQTDIKRLVAYSSVSHMGFV--MIGIYSGSQVALQGVVVQ------------MIAHGLSAAALFILCGQLYE 366
Cdd:PRK12646 286 LFGSITALKQWDLKGILAYSTISQLGMImaMVGIGGGYAQHQQDAIASiyvfvlfaalfhLMNHAIFKCALFMGVGIIDH 365
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 367 RLHTRDMRKMGGLWSRMPYLPAISLFFASASLGLPGTGNFVGEFLILIGAFKVVP----------VIIVIATFGLVFASV 436
Cdd:PRK12646 366 EAGTRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTQTGQlsqfslismiIIVFIGVIASIFTFT 445
|
410
....*....|....*.
gi 489188289 437 YSLIMIHRAYFGPSQS 452
Cdd:PRK12646 446 YALYMVKEVFWGKYDS 461
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
85-485 |
1.37e-21 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 97.33 E-value: 1.37e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 85 DGLSLL--MVALTGLLGVLSVLCSWNEIQR--RIGFFHLNLLWILGGVIGVFlAIDLFLFFFFWEMMLVPMYFLIALwgh 160
Cdd:TIGR01770 69 DNFALLikLILLLSTLLTFFFALSYLSKEKinKFEFYILLLFALLGIFLLVS-SNDLLSIYLGLELQSLCFYVLAGL--- 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 161 SSDDGKKTRiyAATKFFIF-TQASGLvmlvAILGLVFVnFNATGVITFDYATLLKTQLSPHvEWLLMLG---FFVAFAVK 236
Cdd:TIGR01770 145 KRKSRFSTE--AGLKYFILgAFSSGL----LLFGISLI-YGFTGSLNFEDLLLFLSNGMLN-ISLLLLGivlILVGLLFK 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 237 MPVVPVHSWLPDAHAQAPTAGSVDLAGILLKTAAYGLIRFALPLFPNASAEFAPIAMWLGIIGIFYGALLSFAQTDIKRL 316
Cdd:TIGR01770 217 LSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLRLFLYILFGFSEAWQIFLAIIAFLSMLIGNFGALAQKKVKRL 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 317 VAYSSVSHMGFVMIGIYSGSQVALQGVVVQMIAHGLSAAALFILCGQLYERLHTRD--MRKMGGLWSRMPYLPAISLFFA 394
Cdd:TIGR01770 297 LAYSSISHVGYILIGLLAGTLEGIKAVLFYIFIYALMSLGAFGVLSLLRSYKDEWIeyISDFAGLFKTNPILAILILIFM 376
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 395 SASLGLPGTGNFVGEFLILIGAFKVVPV-IIVIATFGLVFASVYSLIMIHRAYFGPSQSDEPILGLDARELSMVLGLAVL 473
Cdd:TIGR01770 377 FSLAGIPPLAGFFGKFYVFFALLKSGLYwLAVIAVLTSVIGAFYYLRVVKVMYFDKPERRIPSNPQSKAQSLLLSISALF 456
|
410
....*....|..
gi 489188289 474 LVLLGVYPQPVL 485
Cdd:TIGR01770 457 ILFLGLFPSLIL 468
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
132-448 |
3.67e-21 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 95.36 E-value: 3.67e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 132 FLAIDLFLFFFFWEMMLVPMYFLIALWGHSSDdgkktRIYAATKFFIFTQASGLVMLVailgLVFVNFNATGVITFDYat 211
Cdd:MTH00094 79 FVSSNMLMLYMFFELSMFPILIMILGYGSQIE-----KINSSYYLLFYAAFFSFPFLF----VYLKNFFFFSLCYFDF-- 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 212 llktqlspHVEWLLMLGFFVAFAVKMPVVPVHSWLPDAHAQAPTAGSVDLAGILLKTAAYGLIRFALplfpnaSAEFAPI 291
Cdd:MTH00094 148 --------FLSWEMFFILSLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRILG------SLNFVYN 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 292 AMW--LGIIGIFYGALLSFAQTDIKRLVAYSSVSHMGFVMIGIYSGSQVALQGVVVQMIAHGLSAAALFILCGQLYERLH 369
Cdd:MTH00094 214 NFWiiFSLLGMILSSFCCVFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHISK 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 370 TRDMRKMGGLW-SRMPYLPAISLFFASaSLGLPGTGNFVGEFLILIGAFKVVPVIIVIATFGLVFASVYSLIMIHRAYFG 448
Cdd:MTH00094 294 SRLIYFMNSFFsSSMFFGLIFSLVFLS-NSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLFLIVSSFMG 372
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
119-448 |
3.39e-20 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 93.29 E-value: 3.39e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 119 LNLLWILGGViGVFLAIDLFLFFFFWEMMLVPMYFLIALwghssdDGKKTRIYAATKFFIFTQASGLVMLVAILGLvfvn 198
Cdd:PRK08377 113 LFLLLMLGAT-GMIATGDIFNLFVFMEITAITAYALTAY------NKTGEAAEASMKYIVLGGIGSSFFLIGVALI---- 181
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 199 FNATGVITFDYATLLKTQLSPHVEWLLMLGFFVAFAVKMPVVPVHSWLPDAHAQAPTAGSVDLAGILLKTAAYGLIRFAL 278
Cdd:PRK08377 182 YGATGTLNMAHIAQLAGTIDPTVAQVGLALLIFGLAVEAELFPLNAWAPDAYQAAPHPITVMFSAFVVKAGLYAMARILY 261
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 279 PLF-PNASAEFAPIAMWLGIIGIFYGALLSFAQTDIKRLVAYSSVSHMGFVMIGIYSGSQVALQGVVVQMIAHGLSAAAL 357
Cdd:PRK08377 262 LMQnANGWSSVLKLVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTQAGVDAGVFHMINHAIVKALL 341
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 358 FILCGQLYERLHTRDMRKMGGLWSRMPYLPAISLFFASASLGLPGTGNFVGEFLILIGAFKVVPV-IIVIATFGLVFASV 436
Cdd:PRK08377 342 FLAVGYVGITLGGTEIEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRIILAGLSAGYTwPVALVLGASVVEAV 421
|
330
....*....|..
gi 489188289 437 YSLIMIHRAYFG 448
Cdd:PRK08377 422 YYFRLIHTMWFK 433
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
85-448 |
2.14e-17 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 84.20 E-value: 2.14e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 85 DGLSLLMVALTGLLGVLSVLCSWNEIQRRIGFFhlnLLWILGGVIGVFLAIDLFLFFFFWEMMLVPMYFLIALWGHSSDd 164
Cdd:MTH00062 44 DSLSFYLILLVLFLGLYSQVMFYNLLSGVSRFF---LFLSLIFSILCFCVNNSLLFWFFYELSIIPLLYLLFSESPYSE- 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 165 gkktRIYAATKFFIFTQASGLVMLVAILGLVFVNfNATGVITFDYatllktqlSPHVEWLLMLGFFVAFAVKMPVVPVHS 244
Cdd:MTH00062 120 ----RYLASWYFLGYLLLTSLPLLLCLLYLSLVN-GSFNFSDWGS--------DDSVSLIVYYVLSFMFITKVPLFPFHT 186
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 245 WLPDAHAQAPTAGSVDLAGILLKTAAYGLIRFALPLFPNasaEFAPIAMWLGIIGIFYgALLSFAQTDIKRLVAYSSVSH 324
Cdd:MTH00062 187 WLPIVHAEASSPVSIFLSGYIMKLGLLGVYRFCGFIFSG---SFLGYLFLCCLFSVFF-LITACSELDGKRWLAFLSLSH 262
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 325 MGFVMIGIYSGSQVALQGVVVQMIAHGLSAAALFILCGQLYERLHTRDMRKM-----GGLWSRMpylpAISLFFASASlG 399
Cdd:MTH00062 263 ILVPVLGLFVGDWSSINLSFFYCLGHGLSAGLVFLLLWCFYEVSGSRNWVLLksginGSLVLRV----IVVFSFLSLC-S 337
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|...
gi 489188289 400 LPGTGNFVGEFLILIGAFKVVPVIIVIATF----GLVFASVYSLIMIHRAYFG 448
Cdd:MTH00062 338 FPPTIQFFCEVFLVSSSFGVLVYLLFWCFYlffgGLVPLILLGHLLIRSESYE 390
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
1-451 |
2.12e-15 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 79.05 E-value: 2.12e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 1 MILPWLI-LIPFIGGFLCWIAEHSSKTLP-RWIALLSMTLVLILSLWIWATGDFQlapapGGEPEWTLQFKVLWIERLGI 78
Cdd:PRK06590 2 MNLLWLIvLLPLIGALILGLFGRRIGEKWaHLVGTGLVGLSALLSLVVFFDFLLG-----GGRAFSQTLWTWISVGDFDV 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 79 SIHLAMDGLSLLMVALTGLLGVLSVLCSW---NEIQRRIGFF-HLNLLwilggvigVF------LAIDLFLFFFFWEMML 148
Cdd:PRK06590 77 DFGLRVDGLSATMLVVVTGVSFLVHIYSIgymAHDEGYRRFFaYLNLF--------TFsmlmlvLSDNLLQLFFGWEGVG 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 149 VPMYFLIALWGHssddgKKTRIYAATKFFIFTQASGLVMLVAIlGLVFVNFNATGVITFDYATLLKTQLSPHVEWLLMLG 228
Cdd:PRK06590 149 LCSYLLIGFWYK-----KPSAGAAAMKAFIVNRVGDVGLALGI-FLLFAEFGSLNYDEVFAAAPQFFGLGWSALTLICLL 222
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 229 FFVAFAVKMPVVPVHSWLPDAHAqAPT-------AGSVDLAGILLktaaygLIRfALPLFpnasaEFAPIAM-WLGIIG- 299
Cdd:PRK06590 223 LFIGAMGKSAQFPLHTWLPDAME-GPTpvsalihAATMVTAGVYL------VAR-MSPLF-----ELSPEALlFVAIVGa 289
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 300 --IFYGALLSFAQTDIKRLVAYSSVSHMGFVMIGIYSGsqvALQGVVVQMIAHGLSAAALFILCGQLYERLH-TRDMRKM 376
Cdd:PRK06590 290 vtALFAAFIGLVQTDIKRVLAYSTMSQLGYMFLALGVG---AYAAAIFHLMTHAFFKALLFLGAGSVIHAMHhEQDIRKM 366
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 489188289 377 GGLWSRMPYLPAISLFFASASLGLPGTGNFVGEFLILIGAFKVVPVIIVIAT-FGLVFASVYSLIMIHRAYFGPSQ 451
Cdd:PRK06590 367 GGLRKKMPVTYATFLIGTLALIGIPPFAGFFSKDEILEAAFANGHINLFVAGlVGAFLTAFYSFRLIFLVFHGKEK 442
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
206-419 |
2.13e-15 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 78.72 E-value: 2.13e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 206 TFDYATL-LKTQLSPHVEWLLMLGFfVAFAVKMPVVPVHSWLPDAHAQAPTAGSVDLAGILLKTAAYGLIRFALpLFPNA 284
Cdd:PRK08042 163 TLDLRLLdMRMQQLPLGSDIWLLGV-IGFGLLAGIIPLHGWVPQAHANASAPAAALFSTVVMKIGLLGILTLSL-LGGNA 240
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 285 SAEFAPIAMWLGIIGIFYGALLSFAQTDIKRLVAYSSVSHMGFVMIGIYSG-SQVALQ----------GVVVQMIAHGLS 353
Cdd:PRK08042 241 PLWWGVALLVLGMITAFVGGLYALMEHNIQRLLAYHTLENIGIILLGLGAGvTGIALEqpalialglvGGLYHLLNHSLF 320
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 489188289 354 AAALFILCGQLYERLHTRDMRKMGGLWSRMPYLPAISLFFASASLGLPGTGNFVGEFLILIGAFKV 419
Cdd:PRK08042 321 KSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQSFFKL 386
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
141-447 |
2.62e-14 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 75.45 E-value: 2.62e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 141 FFFWEMMLVPMYFLIALWGHssddgKKTRIYAATKFFIFTQASGLVMLVAILGLvfvnFNATGviTFDY-------ATLL 213
Cdd:PRK07376 148 YVFWELVGMCSYLLVGFWYD-----RKGAADAAQKAFVVNRVGDFGLLLGILGL----FWATG--SFDFdgiadrlSELV 216
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 214 KT-QLSPHVEWLLMLGFFVAFAVKMPVVPVHSWLPDAhAQAPTAGSVDLAGILLKTAAYGLIRFALPLFpnasaEFAPIA 292
Cdd:PRK07376 217 SSgAVSGWLALLLCILVFLGPMAKSAQFPLHVWLPDA-MEGPTPISALIHAATMVAAGVFLVARMYPVF-----EQFPAV 290
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 293 M----WLGIIGIFYGALLSFAQTDIKRLVAYSSVSHMGFVMIGIYSGSQVAlqgVVVQMIAHGLSAAALFILCGQL---- 364
Cdd:PRK07376 291 MtviaWTGAITAFLGASIALTQNDIKKGLAYSTISQLGYMVMAMGCGAYSA---GLFHLMTHAYFKAMLFLGSGSVihgm 367
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 365 -----YERLHTRDMRKMGGLWSRMPYLPAISLFFASASLGLPGTGNFVGEFLILIGAFKVVPVIIVIatfGLVFASVYSL 439
Cdd:PRK07376 368 eevvgHDPVLAQDMRLMGGLRKYMPITAITFLIGCLAISGIPPFAGFWSKDEILGAAFEANPALWFV---GFLTAGMTAF 444
|
....*...
gi 489188289 440 IMIhRAYF 447
Cdd:PRK07376 445 YMF-RMYF 451
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
126-448 |
3.87e-14 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 74.95 E-value: 3.87e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 126 GGVIGVFLAIDLFLFFFFWEMMLVPMYFLIALWGHSSddgkkTRIYAATKFFIFTQASGLVMLVAILGLvfvnFNATGVI 205
Cdd:PRK07390 131 AAMSGLALSDSLFFSYVLLEILTLSTYLLVGFWYAQP-----LVVTAARDAFLTKRVGDLLLLMGVVAL----SPLAGTL 201
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 206 TFD--YATLLKTQLSPHVEWLLMLGFFVAFAVKMPVVPVHSWLPDAhAQAPTAGSVDLAGILLKTAAYGLIRFAlPLFpn 283
Cdd:PRK07390 202 NFSdlAAWAATANLDPLTATLLGLALIAGPTGKCAQFPLHLWLDEA-MEGPNPASILRNSVVVATGAWVLIKLQ-PVL-- 277
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 284 asaEFAPIA----MWLGIIGIFYGALLSFAQTDIKRLVAYSSVSHMGFVMIGIYSG-SQVALQgvvvQMIAHGLSAAALF 358
Cdd:PRK07390 278 ---ALSPVAltvlIVIGTVTAIGASLVAIAQIDIKRALSYSTSAYLGLVFIAVGLQqPDIALL----LLLTHAIAKALLF 350
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 359 ILCGQLYERLHTRDMRKMGGLWSRMPyLPAISLFFASASL-GLPGTGNFVGeFLILIGAFKVVPVIIVIATFGLVFASVY 437
Cdd:PRK07390 351 MSVGSIILTTITQDLTELGGLWSRMP-ATTLAFLVGSAGLvALLPLGGFWA-LLRLADGLWAVSPWLVGVLLLVNALTAF 428
|
330
....*....|.
gi 489188289 438 SLIMIHRAYFG 448
Cdd:PRK07390 429 NLTRVFRLVFL 439
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
140-413 |
4.26e-13 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 71.91 E-value: 4.26e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 140 FFFFWEMMLVPMYFLIALWGHSSDDGKktriyAATKFFIFTQAS------GLVMLVAILG-LVFVNFNA----TGVITFD 208
Cdd:MTH00032 136 LFIGWEGVGVCSYLLVAFWTTRIQANK-----AAIKAIVVNRVGdvgvilGMVLIYKTIGsLDFLTFNGgsvgSGIMDRG 210
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 209 YATLLKTQLSPHVEWLLMLGFFVAFAVKMPVVPVHSWLPDAhAQAPTAGSVDLAGILLKTAAYGLIRFALPLFPNASAEF 288
Cdd:MTH00032 211 YYGGGAYESPLAPFAIIGILLLIGCIGKSAQLGLHTWLPDA-MEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTL 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 289 APIAMWlGIIGIFYGALLSFAQTDIKRLVAYSSVSHMGF--VMIGIYSGSQVALqgvvVQMIAHGLSAAALFILCGQLYE 366
Cdd:MTH00032 290 LIITIF-GALTAFFAATVGLVQNDLKKVIAYSTCSQLGYmvLIIGIEGSHNVGL----FHLVNHAFFKALLFLSAGSVIH 364
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 489188289 367 RLHT--RDMRKMGGLWSRMPYLPAISLFFASASLGLPGTGNFVGEFLIL 413
Cdd:MTH00032 365 STTVdeQDMRKMGGLIHSIPFTYTMMLIGSFSIMGLPYLTGFYSKDLIL 413
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
85-350 |
4.28e-12 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 68.15 E-value: 4.28e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 85 DGLSLLMVALTGLLGVLSVLCSWNEIQRR---IGFFHLNLLWILGGviGVFL--AIDLFLFFFFWEMMLVPMYFLIalwG 159
Cdd:PRK02504 77 DNLSIAFRAIIALSTLVTLLMSWRYVEQSgtpLGEFAAILLTATLG--GMFLsgATELVMIFISLETLSIASYLLT---G 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 160 HSSDDGKKTRiyAATKFFIFTQASGLVMLVAILGLvfvnFNATGVITFDYATLLKTQLSPHVEWLLMLGFFVA-FAVKMP 238
Cdd:PRK02504 152 YMKRDPRSNE--AALKYLLIGAASSAIFLYGSSLL----YGLSGGSTQLSAIALALITSPSLGLALALVFVIAgIAFKIS 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 239 VVPVHSWLPDAHAQAPTAgSVDLAGILLKTAAYGL-IRFALPLFPNASAEFAPIAMWLGIIGIFYGALLSFAQTDIKRLV 317
Cdd:PRK02504 226 AVPFHQWTPDVYEGSPTP-VVAFLSVGSKAAGFALaIRLLVTAFPSFDEQWKLLFTALAILSMVLGNVVALAQTSMKRML 304
|
250 260 270
....*....|....*....|....*....|...
gi 489188289 318 AYSSVSHMGFVMIGIYSGSQVALQGVVVQMIAH 350
Cdd:PRK02504 305 AYSSIGQAGFVMIGLVAGTEAGYASMVFYLLAY 337
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
90-429 |
6.12e-12 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 67.75 E-value: 6.12e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 90 LMVALTGLLGVLSVLCSWNEiQRRIGFFHLNLLWILGGVIGVFLAIDLFLFFFFWEMMLVPMYFLIALWGhsSDDGKKTr 169
Cdd:PRK06277 76 IIIFVLSLIASLVLITGLGE-KKSSGLYVFLMLMGLASVSAIVLADDIFNLYVFFEIAAIVQVGLVIASG--TEEAYKA- 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 170 iyaATKFFIFTQASGLVML--VAILGLVFVNFNATGVITFdyatLLKTQLSPHVEW-LLMLGFFVAFAVKMPvvPVHSWL 246
Cdd:PRK06277 152 ---ALKYMILGNVAGSILLlgIGFLLASTGTLNITDIHNA----LLVNPTSPVIYGgLLLLIFGLLYGSGLP--PFHTIK 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 247 PDAHAQAPTAGSVDLAGI-LLKTAAYGLIRF----ALPLFPNASAefapIAMWLGIIGIFYGALLSFAQTDIKRLVAYSS 321
Cdd:PRK06277 223 SDIYAKAKPFGSALLQTFsKFVLVALMLVIFklfgGLSYFPSAQG----VLIALSVLAMVFGVVMALLQTDYKRLLAYHA 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 322 VSHMGFVMIGIYSGSQVALQGVVVQMIAHGLSAAALFILCGQLYERLHTRDMRKMGGLWSRMPYLPAISLFFASASLGLP 401
Cdd:PRK06277 299 ISQGGYVAAGLALGTPLGIVAGIFHAINHVIYKSALFLGAGIVSYRTKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVP 378
|
330 340 350
....*....|....*....|....*....|....*
gi 489188289 402 GTGNFVGEFLILIGAFKV-------VPVIIVIATF 429
Cdd:PRK06277 379 PFNGFQSKLMLAQAAMQAnmpelaiIMIIVSIGTF 413
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
126-417 |
2.86e-11 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 65.97 E-value: 2.86e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 126 GGVIGVFLAIDLFLFFFFWEMMLVPMYFLIALWGHSSddgkktriYAATKFFIFTQASGLVMLVAILglvfVNFNATGVI 205
Cdd:PRK06459 83 LGMAIVLTSDNYLLFLAGWEIMTIPSYVAIALTKKNK--------RPAFVFMAFGELSTVLILAGFA----WAFIISGTT 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 206 TFDYatlLKTQLSphvewLLMLGFfvAFAVKMPVVPVH--SWLPDAHAQAPTAGSVDLAGILLKTAAYGLIRFALPLFPN 283
Cdd:PRK06459 151 NFSY---LPSPVP-----LILASF--GFIIKMGMMPFLvsEWLPIAHGNAPSNFSAILSATMTLMGVYGILKMTILTQTI 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 284 ASAEFAPIAMWLGIIGIFYGALLSFAQTDIKRLVAYSSVSHMG--FVMIGIYSGS--------QVALQGVVVQMIAHGLS 353
Cdd:PRK06459 221 PIGYFGLTILAIGAFSILFGALYAYVSENVKGLLAFSTIENNGaiLVALGLYMVTkqlitsieHFSLITVILYSFAHSVA 300
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 489188289 354 AAALFILCGQLYERLHTRDMRKMGGLWSRMPYLPAISLffasasLGLPGTGNFVGEFLILIGAF 417
Cdd:PRK06459 301 KTGLFLSSGLQEKQSITYSKKIRNRWIELGLTLLASSL------SGLLPNIGGVASWLLLESLF 358
|
|
| PRK12664 |
PRK12664 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
129-413 |
3.14e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237164 [Multi-domain] Cd Length: 527 Bit Score: 65.52 E-value: 3.14e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 129 IGVFLAIDLFLFFFFWEMMLVPMYFLIALWGHSSDDGKKTRiYAATKFFiftqaSGLVMLVAILGLVfvnfnatgvitfd 208
Cdd:PRK12664 77 IAAISSSSLTLVVIGFEFMALSALMIIAAGCPGGNIGAFIH-YACVHFF-----SGVLLLVGASGQA------------- 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 209 yatlLKTQLSPHVEWLLMLGFFVAFAVkmpvVPVHSWLPDAHAQAPTAGSVDLAGILLKTAAYGLIRFAlplfpnasaEF 288
Cdd:PRK12664 138 ----QNGQYTGYCKLLFMLGLLINCAC----FPASSWVVDAYPAASNFGIIVLSLFTTKVAALVLLLFF---------SG 200
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 289 APIAMWLGIIGIFYGALLSFAQTDIKRLVAYSSVSHMGFVM--IGIYSGSQVALQGVVVQMIAHGLSAAALFILCGQLYE 366
Cdd:PRK12664 201 EEILLFLGIITAIYGIIFASLEQNIRRLLCYNVVGQMGLLIiaIGFSGSSGVAIGILILQIVLSVVYQTLLFMVADSVIN 280
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 489188289 367 RLHTRDMRKMGGLWSRmpYLPAISLFFASASLG-LPGTGNFVGEFLIL 413
Cdd:PRK12664 281 RTRKFNLNRVGGLFKM--SLEAMCCIIAILNMGaFPGTAGFVSKSLIT 326
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
231-452 |
3.60e-11 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 64.67 E-value: 3.60e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 231 VAFAVKMPVVPVHSWLPDAHAQAPTAGSVDLAgILLKTAAYGLIrfaLPLFPNASaefapIAMWLGIIGIFYGALLSFAQ 310
Cdd:MTH00196 103 VALLFKLSVAPFHMWAPDVYEGAPTKTTALLA-IVPKLGIFSIL---VSIGLNVN-----ILLIGGLFSLFVGAIGALNQ 173
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 311 TDIKRLVAYSSVSHMGFVMIGIYSGSQVALQGVVVQMIAHGLSAAALF--ILCGQLYERLhtrdMRKMGGLWSRMPYLpA 388
Cdd:MTH00196 174 TKIKRLLAYSGIGHMGFVLWGIEIGSFESIQASLVYLFIYIIMSICVFsiILALNVYKNL----IIEFSGLSRRLPIL-A 248
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 489188289 389 ISL---FFASAslGLPGTGNFVGEFLILI-GAFKVVPVIIVIATFGLVFASVYSLIMIHRAYFGPSQS 452
Cdd:MTH00196 249 ITLaltFLSIA--GIPPLVGFLGKWLILLsGVVYQYYLIFLLAVFCSVIAGVYYVRIVKILFFQANSF 314
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
223-408 |
4.82e-11 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 65.03 E-value: 4.82e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 223 WLLMLGFFVAFAVKMPVVPVHSWLPDAHAQAPTAgSVDLAGILLKTAAYGL-IRFALPLFPNASAEFAPIAMWLGIIGIF 301
Cdd:CHL00049 214 SIALIFITVGIGFKLSLAPFHQWTPDVYEGSPTP-VVAFLSVTSKVAASALaTRIFDIPFYFSSNEWHLLLEILAILSMI 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 302 YGALLSFAQTDIKRLVAYSSVSHMGFVMIGIYSG-SQVALQGVVVQMIAH---GLSAAALFILCGQlyeRLHTRDMRKMG 377
Cdd:CHL00049 293 LGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGdSNDGYASMITYMLFYifmNLGTFACIVLFGL---RTGTDNIRDYA 369
|
170 180 190
....*....|....*....|....*....|..
gi 489188289 378 GLWSRMPYLpAISLFFASASL-GLPGTGNFVG 408
Cdd:CHL00049 370 GLYTKDPFL-ALSLALCLLSLgGIPPLAGFFG 400
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
210-432 |
6.88e-11 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 64.49 E-value: 6.88e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 210 ATLLKTQLSPHVEWLLMLGFFVAFAVKMPVVPVHSWLPDAHAQAPTAGSVdLAGILLKTAAYGLIrfalplfpNASAEFA 289
Cdd:MTH00198 286 ATLETTNIELRQGSLGYLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTA-LIAIIPKFTVYILL--------TSLVITS 356
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 290 PIAMWLGIIGIFYGALLSFAQTDIKRLVAYSSVSHMGFVMIGIYSGSQVALQGVVVQMIAHGLSAAALF-ILC-----GQ 363
Cdd:MTH00198 357 KLLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVSAGTYESLQASWTYAVTYLVSALASFtVICtleefGT 436
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 364 LYERLHTRDMRKMGGLWSR-----------MPYLpAISLFFASASL-GLPGTGNFVGEFLILIGAFKV-----VPVIIVI 426
Cdd:MTH00198 437 RTPTSRQRDGSFGNYNLVRrlvdltilsrgQPYI-AFSLAIVFLSLaGIPPLLGFLGKWFILVGSIKIafsssLSIYYLV 515
|
....*.
gi 489188289 427 ATFGLV 432
Cdd:MTH00198 516 ALFAII 521
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
224-466 |
1.11e-10 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 64.02 E-value: 1.11e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 224 LLMLGFFVAFAVKMPVVPVHSWLPDAHAqAPTAGSVDLAGILLKTAA-YGLIRFALplFPNASAEFAPIAMWLGIIGIFY 302
Cdd:MTH00207 180 YIALSIMIAAMTKSAQMPFSSWLPAAMA-APTPVSALVHSSTLVTAGvFLLIRFYP--FLSSTYWFNPALLLTASLTMLM 256
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 303 GALLSFAQTDIKRLVAYSSVSHMGFVMIGIYSGSQ-VALqgvvVQMIAHGLSAAALFILCGQL-YERLHTRDMRKMGGLW 380
Cdd:MTH00207 257 AGLSAMTECDMKKIIALSTLSQLGVMMASLGLGMPkLAL----FHLITHALFKALLFVCAGSLiHSHHHSQDLRTMGNLT 332
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 381 SRMPyLPAISLFFASASL-GLPGTGNFVGEFLILIGA--FKVVPVIIVIATFGLVFASVYSLIMIHRAYFGPSQSdEPIL 457
Cdd:MTH00207 333 NQMP-LTTSCLLIANLALcGSPFLSGFYSKDLILESSlfYPHNSLMILMIFLATALTAAYSTRFTLAVLWSPNSS-SPYH 410
|
....*....
gi 489188289 458 GLDARELSM 466
Cdd:MTH00207 411 HLEDEDKSL 419
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
218-440 |
1.56e-10 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 62.60 E-value: 1.56e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 218 SPHVEWLLMLGFFVAFAVKMPVVPVHSWLPDAHAQAPTAGSVDLAGILlKTAayglIRFALPLFpNASAEFAPIAMWLGI 297
Cdd:MTH00144 79 NLSFSWFSMSLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQ-KVA----PLFLLSNF-LDLYWLAYLLCVISV 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 298 IGIFYGALLSFAQTDIKRLVAYSSVSHMGFVMIGIYSGSQValqgVVVQMIAHGLSAAALFILCGQLYerlhTRDMRKMG 377
Cdd:MTH00144 153 LSALVGSIGGLNQTQVRALLAYSSISHTGWMLVAILHGSWL----MWMYFLIYIVSSGFLFFSLWSGD----SGSMKDLG 224
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 489188289 378 GLWSRMPYLPAISLFFASASlGLPGTGNFVGEFLILIGAFKVVPviiVIATFGLVFASVYSLI 440
Cdd:MTH00144 225 SLKPSYKTGLSIISLLLSLG-GLPPFLGFCSKLLVLISSMESSP---LLLILLLLLGSLISLF 283
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
141-452 |
3.99e-10 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 62.40 E-value: 3.99e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 141 FFFWEMMLVPMYFLIALWghssddgkKTRIYA---ATKFFIFTQASGLVMLVAILGLvfvnFNATGVITFDYA-TLLKTQ 216
Cdd:MTH00020 137 FIGWEGVGLCSYLLINFW--------LTRIEAnkaAIKAMLVNRVGDIGLLLAMFLL----WDRFGSLDFSSVfNMVVSA 204
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 217 LSPHVEWLLMLGFFVAFAvKMPVVPVHSWLPDAhAQAPTAGSVDLAGILLKTAAYGLIRFALPLFpnasaEFAPIA-MWL 295
Cdd:MTH00020 205 PSSDITLICLFLFIGAVG-KSAQLGLHTWLPDA-MEGPTPVSALIHAATMVTAGVFLLIRSSPLF-----EQAPLAlIIV 277
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 296 GIIG---IFYGALLSFAQTDIKRLVAYSSVSHMGFvMIGIYSGSQVALQgvVVQMIAHGLSAAALFILCGQLYERL-HTR 371
Cdd:MTH00020 278 TIVGsltVFFAATVGLVQNDLKKVIAYSTCSQLGY-MVVACGLSHYSIS--LFHLMNHAFFKALLFLSAGSVIHALsDEQ 354
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 372 DMRKMGGLWSRMPyLPAISLFFASASL-GLPGTGNFVGEFLILIGAFKVVPVIIV--IATFGLVFASVYSLIMIHRAYFG 448
Cdd:MTH00020 355 DMRKMGGLISFLP-LTYIFFLIGSLSLmGFPYLTGFYSKDLILELAFGQYYLIFAywLGCFSALLTAFYSIRLIYLTFLS 433
|
....
gi 489188289 449 PSQS 452
Cdd:MTH00020 434 NTNL 437
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
221-448 |
3.69e-09 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 59.19 E-value: 3.69e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 221 VEWLLMLGFFVAFAVKMPVVPVHSWLPDAHAqAPTAGSVDL-------AGILLktaaygLIRFaLPLFPNaSAEFAPIAM 293
Cdd:MTH00211 202 DLTLFLLGLLLAAMGKSAQFGFHPWLPSAME-GPTPVSALLhsstmvvAGVFL------LIRL-SPLFQN-NQLILGAVL 272
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 294 WLGIIGIFYGALLSFAQTDIKRLVAYSSVSHMGFVMIGIYSG-SQVALqgvvVQMIAHGLSAAALFILCGQLyerLHTR- 371
Cdd:MTH00211 273 LLGALTMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLNqPQLAF----LHICTHAFFKAMLFMCSGSI---IHGLn 345
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 372 ---DMRKMGGLWSRMPyLPAISLFFASASL-GLPGTGNFVGEFLIL-------IGAFKVVPVIIviatfGLVFASVYSLI 440
Cdd:MTH00211 346 neqDIRKMGGLSKNLP-FTSSCLFLGSLALmGFPFLSGFFSKDLILesmngsyLNAWALLLTLL-----ATSLTAAYSFR 419
|
....*...
gi 489188289 441 MIHRAYFG 448
Cdd:MTH00211 420 LIFLSLGG 427
|
|
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
241-384 |
8.84e-09 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 57.98 E-value: 8.84e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 241 PVHSWLPDAhAQAPT-------AGSVDLAGILLktaayglIRFALPLFpnasaEFAPIAM----WLGIIGIFYGALLSFA 309
Cdd:CHL00025 245 PLHVWLPDA-MEGPTpisalihAATMVAAGIFL-------VARLLPLF-----IVIPYIMnlisLIGIITALLGATLALA 311
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 310 QTDIKRLVAYSSVSHMGFVMIGIYSGS-QVALqgvvVQMIAHGLSAAALFILCGQL---------YERLHTRDMRKMGGL 379
Cdd:CHL00025 312 QKDIKRGLAYSTMSQLGYMMLALGIGSyRAAL----FHLITHAYSKALLFLGSGSVihsmepivgYSPDKSQNMVLMGGL 387
|
....*
gi 489188289 380 WSRMP 384
Cdd:CHL00025 388 RKYMP 392
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
141-413 |
1.38e-08 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 57.33 E-value: 1.38e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 141 FFFWEMMLVPMYFLIALWGhssddgkkTRIyAATKFFIftqASGLVMLVAILGLV---FVNFNATGVITFD--YATLLKT 215
Cdd:MTH00210 137 FIGWEGVGLCSYLLINFWL--------TRI-KANKAAI---KAMLINRVGDIGLVlamIMILKEFGTLEFStiSSLLVTN 204
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 216 QLSPHVEWLLMLGFFVAFAvKMPVVPVHSWLPDAhAQAPTAGSVDLAGILLKTAAYGLIRFALPLFpnasaEFAPIAMWL 295
Cdd:MTH00210 205 INKESLTIICLLLFIGAVG-KSAQLGLHTWLPDA-MEGPTPVSALIHAATMVTAGVFLIIRSGPLF-----EGSPLALTI 277
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 296 -GIIG---IFYGALLSFAQTDIKRLVAYSSVSHMGF-VMIGIYSGSQVALqgvvVQMIAHGLSAAALFILCGQLYERLH- 369
Cdd:MTH00210 278 vTILGaltAFFAATVGVVQNDLKKVIAYSTCSQLGYmVMVCGISNYSTSL----FHLMNHAFFKALLFLSAGSVIHAVSd 353
|
250 260 270 280
....*....|....*....|....*....|....*....|....*
gi 489188289 370 TRDMRKMGGLWSRMPyLPAISLFFASASL-GLPGTGNFVGEFLIL 413
Cdd:MTH00210 354 EQDMRKMGGLIKSIP-FTYVMILIGSLSLmGFPYLTGFYSKDLIL 397
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
231-457 |
1.70e-08 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 56.56 E-value: 1.70e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 231 VAFAVKMPVVPVHSWLPDAHAQAPTAGSVDLAgILLKTAAYGLIRFALPLfpnasaefAPIAMWLGIIGIFYGALLSFAQ 310
Cdd:MTH00199 198 ISLLFKLSAAPFHMWAPDVYEGAPTITTALLA-TVPKIGVFSILVQIGPV--------TNVVLICAVLSIIYGAIGALNQ 268
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 311 TDIKRLVAYSSVSHMGFVMIGIYSGSQVALQGVVVQMIAHGLSAAALFILCGQLyeRLHTRDMRKMGGLWSRMPYLpAIS 390
Cdd:MTH00199 269 TKIKRLLAYSGIGHMGFILFGVAIGSFESIQASLIYMIIYVIMSICSFSIILSL--KLTKGLIVEVSGLSRKNPVI-ALT 345
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 489188289 391 LFFASASL-GLPGTGNFVGEFLILI----GAFKVVPVIIVIATfglVFASVYSLIMIHRAYFgpsQSDEPIL 457
Cdd:MTH00199 346 LALTFLSIaGIPPLAGFLSKWLILLsgvsSGYYLICIIAVLSS---VIAGVYYVRVVQIIYF---QADYSIL 411
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
121-441 |
7.61e-08 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 54.20 E-value: 7.61e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 121 LLWILGGVIGVFLAIDLFLFFFFWEMMLVPMYFLIALWGHssdDGKKTRIYAATKFFIFTQASGLVMLVAILglvfVNFN 200
Cdd:MTH00200 7 PLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIK---QHHPRKVEATTKYFIIQATASALLLFGGL----LNAW 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 201 ATGVITFDYatllktQLSPHVEWLLMLgffvAFAVKMPVVPVHSWLPDahaqapTAGSVDLAGILLKTAAYGLIRFALpL 280
Cdd:MTH00200 80 TSGQWGISE------MLGPLSETLILL----ALALKLGLAPGHFWVPD------VLQGLSLQTGLILSTWQKLAPFAL-L 142
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 281 FPNASAEFAPIAMWLGIIGIFYGALLSFAQTDIKRLVAYSSVSHMGFVMIGIYSGSQVALQGVVVQMIahglSAAALFIl 360
Cdd:MTH00200 143 IQLAPALNSNILLLLGLLSVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVI----ITLTVFL- 217
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 361 cgqLYERLHTRDMRKMGGLWSRMPYLPAISLFFASASLGLPGTGNFVGEFLILIGAFKvvpVIIVIATFGLVFASVYSLI 440
Cdd:MTH00200 218 ---LLNLLNSTKINSLSSSKTKNPILSMLLGLTLLSLGGLPPLTGFFPKWLILQELSK---QGLFIYATILLLGSLLSLF 291
|
.
gi 489188289 441 M 441
Cdd:MTH00200 292 F 292
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
112-383 |
4.67e-07 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 52.35 E-value: 4.67e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 112 RRIGFFHLNLLWILGGVIGVFLAIDLFLFFFFWEMMLVPMYFLIAL---WGHSSDDGKktriYAATKFFIftqaSGLVML 188
Cdd:PRK08601 100 RSYRKYFALFTFTTGFASLAWLSGDLRLMALCWGATLLGLTLLIGLnkgWKVAREAAK----ISGMLFLI----SWLALA 171
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 189 VAILGLvfvnFNATGVITFdYATLLKTQLSPHVEWL-LMLGFFVAFAVKMPVV--PVHSWLPDAhAQAPT-------AGS 258
Cdd:PRK08601 172 LAIVWL----FIATGEWQL-TSVLSNENLAQLGTWEkTGINLLLILAVMIPAAqwPFQRWLIES-AVAPTpvsaimhAGL 245
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 259 VDLAGILLKtaaygliRFAlPLFpnaSAEFAPIAMW-LGIIGIFYGALLSFAQTDIKRLVAYSSVSHMGFVMI----GIY 333
Cdd:PRK08601 246 VNAGGIMLT-------RFS-PLF---HDDIAQILLLiFASISVLIGTGISLVQVDYKRQLVGSTMAQMGFMLVqcalGAY 314
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 489188289 334 SGSqvalqgvVVQMIAHGLSAAALFILCGQLYER--LHTRDMRKMGGLWSRM 383
Cdd:PRK08601 315 SAA-------IIHLILHGLFKATLFLQSGSAVPRfnIVKQANEKKSYLWIVV 359
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
116-449 |
5.28e-07 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 52.28 E-value: 5.28e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 116 FFHLNLLWILGGVIGVFlAIDLFLFFFFWEMMLVPMYFLIALWGHSSDDGKktriyAATKFFIFTQA--SGLVMLVAILG 193
Cdd:MTH00208 140 FFRLLIIFLLNMLILTS-SNNLFLLFIGWEGVGFLSFLLISWWTTRNDANS-----SALQAVIYNRIgdIGIILFLSLSL 213
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 194 LVFVNFNATGVITFDyatllktQLSPHVEWLLMLGFFVAFAVKMPVVPVHSWLPDAhAQAPTAGSVDL-------AGILL 266
Cdd:MTH00208 214 INFNSWNLNEILSLN-------NSNSFLINILLFGILLAAAGKSAQFGLHPWLPAA-MEGPTPVSALLhsstmvvAGVFL 285
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 267 ktaaygLIRFAlPLFPNASAeFAPIAMWLGIIGIFYGALLSFAQTDIKRLVAYSSVSHMGFVMIGIYSGS-QVALqgvvV 345
Cdd:MTH00208 286 ------LIRTS-PLISNSPW-FLSLCLILGSLTALFAASTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQpNLAL----F 353
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 346 QMIAHGLSAAALFILCGQLYERLHT-RDMRKMGGLWSRMPYLPAiSLFFASASL-GLPGTGNFVGEFLIL-IGAFKVVPV 422
Cdd:MTH00208 354 HICTHAFFKAMLFLCSGSIIHSLNNeQDLRKMGGLSFLLPVTSS-CIILGSLALmGTPFLAGFYSKDLILeAGLASISNL 432
|
330 340
....*....|....*....|....*...
gi 489188289 423 I-IVIATFGLVFASVYSLIMIHRAYFGP 449
Cdd:MTH00208 433 LsIILALIATLLTAVYSFRIIFFCFLNN 460
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
223-413 |
7.16e-07 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 51.96 E-value: 7.16e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 223 WLLMLgFFVAFAVKMPVVPVHSWLPDAHAqAPTAGSVDLAGILLKTAA-YGLIRFALPLFpnASAEFAPIAMWLGIIGIF 301
Cdd:MTH00209 176 VISVL-IVLAAMTKSAQIPFSAWLPAAMA-APTPVSALVHSSTLVTAGvYLLIRFFPSLF--SSPFFSMSLLLLGSLTTL 251
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 302 YGALLSFAQTDIKRLVAYSSVSHMGFVMIGIYSGS-QVALqgvvVQMIAHGLSAAALFILCGQL-YERLHTRDMRKMGGL 379
Cdd:MTH00209 252 MASMSANVESDLKKIIALSTLSQLGLMMCSLGLNQpELAF----FHLITHALFKALLFICAGNIiHSHGHSQDIRMVGNL 327
|
170 180 190
....*....|....*....|....*....|....*
gi 489188289 380 WSRMPyLPAISLFFASASL-GLPGTGNFVGEFLIL 413
Cdd:MTH00209 328 WYQMP-ITSICLNIANLSLcGIPFLAGFYSKDLIL 361
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
224-384 |
1.19e-05 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 47.98 E-value: 1.19e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 224 LLMLGFFVAFAVKMPVVPVHSWLPDAhAQAPTAGSVDL-------AGILLktaaygLIRFAlPLFPNASAEFApIAMWLG 296
Cdd:MTH00066 208 LPLLGLILAAAGKSAQFGLHPWLPAA-MEGPTPVSALLhsstmvvAGIFL------LIRFH-PLLENNQTALT-ICLCLG 278
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 297 IIGIFYGALLSFAQTDIKRLVAYSSVSHMGFVMIGI-YSGSQVALqgvvVQMIAHGLSAAALFILCGQLYERLH-TRDMR 374
Cdd:MTH00066 279 ALTTLFTAACALTQNDIKKIVAFSTSSQLGLMMVTIgLNQPQLAF----FHICTHAFFKAMLFLCSGSIIHSLNdEQDIR 354
|
170
....*....|
gi 489188289 375 KMGGLWSRMP 384
Cdd:MTH00066 355 KMGGLQKALP 364
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
227-439 |
2.69e-05 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 46.76 E-value: 2.69e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 227 LGFFVAFA--VKMPVVPVHSWLPDAHAqAPTAGSVDLAGILLKTAA-YGLIRFalplFPNA--SAEFAPIAMWLGIIGIF 301
Cdd:MTH00151 178 LGLLLVLAamTKSAQIPFSSWLPAAMA-APTPVSALVHSSTLVTAGvFLLIRF----FPFLssSSGFSSFLLFISLLTLL 252
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 302 YGALLSFAQTDIKRLVAYSSVSHMGFVMIGIYSGS-QVALqgvvVQMIAHGLSAAALFILCGQLyerLH----TRDMRKM 376
Cdd:MTH00151 253 MAGISACYENDLKKIIALSTLSQLGVMMFSLGLGMpSLAL----FHLYTHALFKALLFLCAGSI---IHsssgTQDIRLL 325
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 489188289 377 GGLWSRMPyLPAISLFFASASL-GLPGTGNFVGEFLILIGAFK--VVPVIIVIATFGLVFASVYSL 439
Cdd:MTH00151 326 GSLFLSLP-LTSGCLNISSLSLcGAPFLSGFYSKDLILESSLMspTSLLMVLLMFVGVGLTALYSA 390
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
243-384 |
6.93e-05 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 45.61 E-value: 6.93e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 243 HSWLPDAhAQAPTAGSVDL-------AGILLktaaygLIRFAlPLFPNASAeFAPIAMWLGIIGIFYGALLSFAQTDIKR 315
Cdd:MTH00108 230 HPWLPSA-MEGPTPVSALLhsstmvvAGVFL------LIRFH-PLMENNKT-IQTLTLCLGAITTLFTAICALTQNDIKK 300
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 489188289 316 LVAYSSVSHMGFVM--IGIysgSQVALqgVVVQMIAHGLSAAALFILCGQLYERLHT-RDMRKMGGLWSRMP 384
Cdd:MTH00108 301 IVAFSTSSQLGLMMvtIGI---NQPHL--AFLHICTHAFFKAMLFMCSGSIIHNLNDeQDIRKMGGLFKTLP 367
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
224-362 |
1.85e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 44.14 E-value: 1.85e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 224 LLMLGFfvafaVKMPVVPVHSWLPDAHAqAPTAGSVDLAGILLKTAayGLIRFALPLFPNASAEFAPIAMWLGIIGIFYG 303
Cdd:MTH00095 170 LLLTSF-----TKSAQFPFSSWLPKAMS-APTPVSSLVHSSTLVTA--GLILLMNFSYLILNMNVMKIMLLIGLFTMFFS 241
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 304 ALLSFAQTDIKRLVAYSSVSHMGFVMIGIYSGsqvaLQGVV-VQMIAHGLSAAALFILCG 362
Cdd:MTH00095 242 SLSALVEEDMKKVVALSTLSQMGFSMLTFGSG----LSFVSfIHLLSHALFKSCLFMQVG 297
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
170-413 |
3.83e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 42.50 E-value: 3.83e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 170 IYAATKFFIfTQ--ASGLVMLVAILglvfvNFNATGviTFDYatllkTQLSPHVEWLLMLgffVAFAVKMPVVPVHSWLP 247
Cdd:MTH00112 53 TEAATKYFL-TQaaASALILFSSTT-----NAWNTG--QWDI-----TQLTNPTSCTLLT---LALAMKLGLAPFHFWLP 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 248 DAhaqapTAGSVDLAGILLKTaaygLIRFAlP---LFPNASAEFAPIAMWLGIIGIFYGALLSFAQTDIKRLVAYSSVSH 324
Cdd:MTH00112 117 EV-----LQGSTTTTALILST----WQKLA-PltlLLMTSNSLNPTLLLTLAILSTLIGGWGGLNQTQLRKIMAFSSIAH 186
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 325 MGFVMIGIYSGSQVALQGVVVQMIahgLSAAALFILcgqlyERLHTRDMRKMGGLWSRMPYLPAIsLFFASASL-GLPGT 403
Cdd:MTH00112 187 LGWMIAIITYSPKLTLLTFYIYIL---MTTPMFLTL-----NTTSTKTLKDMMTSWTKSPTLNTT-LMLTLLSLaGLPPL 257
|
250
....*....|
gi 489188289 404 GNFVGEFLIL 413
Cdd:MTH00112 258 TGFMPKWLIL 267
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
243-403 |
1.03e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 41.74 E-value: 1.03e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 243 HSWLPDAhAQAPTAGSVDL-------AGILLktaaygLIRFAlPLFPNASAEFApIAMWLGIIGIFYGALLSFAQTDIKR 315
Cdd:MTH00137 235 HPWLPSA-MEGPTPVSALLhsstmvvAGIFL------LIRLS-PLMENNQTALT-TCLCLGALTTLFTATCALTQNDIKK 305
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 316 LVAYSSVSHMGFVMIGIYSGS-QVALqgvvVQMIAHGLSAAALFILCGQLYERLH-TRDMRKMGGLWSRMPylpaislfF 393
Cdd:MTH00137 306 IVAFSTSSQLGLMMVTIGLNQpQLAF----LHICTHAFFKAMLFLCSGSIIHSLNdEQDIRKMGGLHHLTP--------F 373
|
170
....*....|....*
gi 489188289 394 ASA-----SLGLPGT 403
Cdd:MTH00137 374 TSScltigSLALTGT 388
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
170-413 |
3.45e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 39.52 E-value: 3.45e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 170 IYAATKFFIfTQ--ASGLVMLVAILglvfvNFNATGVITFdyaTLLKTQLSphvewLLMLGffVAFAVKMPVVPVHSWLP 247
Cdd:MTH00070 53 TEAATKYFL-TQasASALILFSSTI-----NAWFTGEWTI---MNMQTPLP-----TIMLT--IALMMKLGIAPFHFWLP 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 248 DAhaqaptagsvdLAGILLKTaayGLIR--------FALpLFPNASAEFAPIAMWLGIIGIFYGALLSFAQTDIKRLVAY 319
Cdd:MTH00070 117 EV-----------LQGLDLTT---GLILstwqklapMAL-LIQISHLLNSNLLIIMGLLSTLIGGWGGLNQTQLRKIMAY 181
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 320 SSVSHMGFVMIGIYSGSQVALQGVVVQMIAhglsAAALFIlcgqLYERLHTRDMRKMGGLWSRMPYLPAISLFFASASLG 399
Cdd:MTH00070 182 SSIAHLGWMIIILTFSPHLTLLNLLIYLIM----TSSMFL----MLMNLNSTNINKLSSSWSKNPTLTSMMMLTLLSLGG 253
|
250
....*....|....
gi 489188289 400 LPGTGNFVGEFLIL 413
Cdd:MTH00070 254 LPPTTGFIPKWLIL 267
|
|
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
172-330 |
5.55e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 39.06 E-value: 5.55e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 172 AATKFFIfTQ--ASGLVMLVAILglvfvNFNATGVITFdyatllkTQLSPHVEWLLMLgffVAFAVKMPVVPVHSWLPDA 249
Cdd:MTH00105 55 AATKYFL-TQatASMLLMMAIII-----NLMYSGQWTI-------TKLTNPTASTLMT---IALAMKLGLAPFHFWVPEV 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 250 haqapTAGSVDLAGILL----KTAAYG-LIRFALPLFPNasaefapIAMWLGIIGIFYGALLSFAQTDIKRLVAYSSVSH 324
Cdd:MTH00105 119 -----TQGIPLSSGMILltwqKLAPLSiLYQISPSINPN-------LLLTLAILSILIGGWGGLNQTQLRKILAYSSIAH 186
|
....*.
gi 489188289 325 MGFVMI 330
Cdd:MTH00105 187 MGWMTA 192
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
224-403 |
8.50e-03 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 38.61 E-value: 8.50e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 224 LLMLGFFVAFAVKMPVVPVHSWLPDAhAQAPTAGSVDL-------AGILLktaaygLIRFALPLFPNASAefAPIAMWLG 296
Cdd:MTH00004 210 LPLLGLILAATGKSAQFGLHPWLPAA-MEGPTPVSALLhsstmvvAGIFL------LIRTHPLLQNNQTA--LTICLCLG 280
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489188289 297 IIGIFYGALLSFAQTDIKRLVAYSSVSHMGF--VMIGIYSgSQVALqgvvVQMIAHGLSAAALFILCGQLyerLHT---- 370
Cdd:MTH00004 281 ALTTLFAATCALTQNDIKKIIAFSTSSQLGLmmVTIGLNQ-PQLAF----LHISTHAFFKAMLFLCSGSI---IHNlnne 352
|
170 180 190
....*....|....*....|....*....|...
gi 489188289 371 RDMRKMGGLwsrMPYLPAISLFFASASLGLPGT 403
Cdd:MTH00004 353 QDIRKMGGL---QKTLPITSSCLTIGNLALMGT 382
|
|
| |
