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Conserved domains on  [gi|489192412|ref|WP_003101758|]
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MULTISPECIES: amino acid permease [Pseudomonas]

Protein Classification

amino acid permease( domain architecture ID 11438095)

amino acid permease facilitates the transport of amino acids; similar to Mycobacterium tuberculosis L-asparagine permease

Gene Ontology:  GO:0055085|GO:0006865|GO:0016020|GO:0015171
PubMed:  10931886|24038584|25043943
TCDB:  2.A.3.1

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
AnsP COG1113
L-asparagine transporter or related permease [Amino acid transport and metabolism];
2-454 0e+00

L-asparagine transporter or related permease [Amino acid transport and metabolism];


:

Pssm-ID: 440730 [Multi-domain]  Cd Length: 458  Bit Score: 615.21  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412   2 THDTGLRRGLNARHIRFMALGSAIGTGLFYGSASAIQMAGPAVLLAYLIAGAAVYMVMRALGEMAVHEPVSGSFGHYASS 81
Cdd:COG1113    8 SEEEGLKRGLKNRHIQMIALGGAIGTGLFLGSGKAIALAGPAVLLSYLIAGLIVFLVMRALGEMAVANPVSGSFSDYARE 87

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412  82 YLGPLAGFVTGWTYAFEMIIVCLADVTAFGIYMGFWFPDVPRWIWVLSIVLFIGGLNLCHVKVFGELEFWLSLVKVGAIV 161
Cdd:COG1113   88 YLGPWAGFVTGWLYWFFWVLVGMAEATAVGIYLQFWFPDVPQWVWALVFLVLLTAINLLSVKLFGEFEFWFALIKVVAIV 167

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412 162 AMILAGLGIMFFGFSLGGAAtsATGVHNLWQHGGFLPNGWAGLVASLSVVVFAFGGIEIIGITAGEAQDPQRVIPRAINA 241
Cdd:COG1113  168 AFIVVGLLLIFFGFGLPGGP--PAGLSNLWDHGGFFPNGIGGVLAALQIVVFAFGGIELVGIAAAEAKDPEKTIPKAINS 245

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412 242 VPLRILLFYVLTLFVLMAIFPWQQIGSNGSPFVQIFDGLGIESAAAILNVVVITAAISAINSDIFGAGRMLYGMARQGQA 321
Cdd:COG1113  246 VIWRILLFYVGSLFVILALVPWNQIGAGGSPFVTVFSLLGIPAAAGIMNFVVLTAALSSLNSGLYSTSRMLYSLAERGDA 325

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412 322 PVGFSRVSRHGVPWMTVLLMAVALLLGVALNYLIPQSVFLLIASIATFATVWVWLMILLAQVGMRRRMGPRQVAALKFPV 401
Cdd:COG1113  326 PKFFGKLSKRGVPVRAILLSAVVLLIGVVLNYLLPEKAFTFLLSISGFGALFVWLMILVSQLKFRRRLPREGAAALKFKM 405

                        410       420       430       440       450
                 ....*....|....*....|....*....|....*....|....*....|...
gi 489192412 402 PLWPFAPAAAIVFMLFIFVVLGYFPDTRPALWVGAIWIALLVIAYRRWVRPKG 454
Cdd:COG1113  406 PGFPYTSYLTLAFLAAVLVLMAFDPDTRIALIVGPVWLALLVVGYFLVRRRRA 458
 
Name Accession Description Interval E-value
AnsP COG1113
L-asparagine transporter or related permease [Amino acid transport and metabolism];
2-454 0e+00

L-asparagine transporter or related permease [Amino acid transport and metabolism];


Pssm-ID: 440730 [Multi-domain]  Cd Length: 458  Bit Score: 615.21  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412   2 THDTGLRRGLNARHIRFMALGSAIGTGLFYGSASAIQMAGPAVLLAYLIAGAAVYMVMRALGEMAVHEPVSGSFGHYASS 81
Cdd:COG1113    8 SEEEGLKRGLKNRHIQMIALGGAIGTGLFLGSGKAIALAGPAVLLSYLIAGLIVFLVMRALGEMAVANPVSGSFSDYARE 87

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412  82 YLGPLAGFVTGWTYAFEMIIVCLADVTAFGIYMGFWFPDVPRWIWVLSIVLFIGGLNLCHVKVFGELEFWLSLVKVGAIV 161
Cdd:COG1113   88 YLGPWAGFVTGWLYWFFWVLVGMAEATAVGIYLQFWFPDVPQWVWALVFLVLLTAINLLSVKLFGEFEFWFALIKVVAIV 167

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412 162 AMILAGLGIMFFGFSLGGAAtsATGVHNLWQHGGFLPNGWAGLVASLSVVVFAFGGIEIIGITAGEAQDPQRVIPRAINA 241
Cdd:COG1113  168 AFIVVGLLLIFFGFGLPGGP--PAGLSNLWDHGGFFPNGIGGVLAALQIVVFAFGGIELVGIAAAEAKDPEKTIPKAINS 245

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412 242 VPLRILLFYVLTLFVLMAIFPWQQIGSNGSPFVQIFDGLGIESAAAILNVVVITAAISAINSDIFGAGRMLYGMARQGQA 321
Cdd:COG1113  246 VIWRILLFYVGSLFVILALVPWNQIGAGGSPFVTVFSLLGIPAAAGIMNFVVLTAALSSLNSGLYSTSRMLYSLAERGDA 325

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412 322 PVGFSRVSRHGVPWMTVLLMAVALLLGVALNYLIPQSVFLLIASIATFATVWVWLMILLAQVGMRRRMGPRQVAALKFPV 401
Cdd:COG1113  326 PKFFGKLSKRGVPVRAILLSAVVLLIGVVLNYLLPEKAFTFLLSISGFGALFVWLMILVSQLKFRRRLPREGAAALKFKM 405

                        410       420       430       440       450
                 ....*....|....*....|....*....|....*....|....*....|...
gi 489192412 402 PLWPFAPAAAIVFMLFIFVVLGYFPDTRPALWVGAIWIALLVIAYRRWVRPKG 454
Cdd:COG1113  406 PGFPYTSYLTLAFLAAVLVLMAFDPDTRIALIVGPVWLALLVVGYFLVRRRRA 458
proY PRK10580
putative proline-specific permease; Provisional
 1-458 0e+00

putative proline-specific permease; Provisional


Pssm-ID: 182566 [Multi-domain]  Cd Length: 457  Bit Score: 562.52  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412   1 MTHDTGLRRGLNARHIRFMALGSAIGTGLFYGSASAIQMAGPAVLLAYLIAGAAVYMVMRALGEMAVHEPVSGSFGHYAS 80
Cdd:PRK10580   1 MESKNKLKRGLSTRHIRFMALGSAIGTGLFYGSADAIKMAGPSVLLAYIIGGVAAYIIMRALGEMSVHNPAASSFSRYAQ 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412  81 SYLGPLAGFVTGWTYAFEMIIVCLADVTAFGIYMGFWFPDVPRWIWVLSIVLFIGGLNLCHVKVFGELEFWLSLVKVGAI 160
Cdd:PRK10580  81 ENLGPLAGYITGWTYCFEILIVAIADVTAFGIYMGVWFPTVPHWIWVLSVVLIICAVNLMSVKVFGELEFWFSFFKVATI 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412 161 VAMILAGLGIMFFGFSLGGaatSATGVHNLWQHGGFLPNGWAGLVASLSVVVFAFGGIEIIGITAGEAQDPQRVIPRAIN 240
Cdd:PRK10580 161 IIMIVAGIGIIIWGIGNGG---QPTGIHNLWSNGGFFSNGWLGMVMSLQMVMFAYGGIEIIGITAGEAKDPEKSIPRAIN 237

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412 241 AVPLRILLFYVLTLFVLMAIFPWQQIGSNGSPFVQIFDGLGIESAAAILNVVVITAAISAINSDIFGAGRMLYGMARQGQ 320
Cdd:PRK10580 238 SVPMRILVFYVGTLFVIMSIYPWNQVGTNGSPFVLTFQHMGITFAASILNFVVLTASLSAINSDVFGVGRMLHGMAEQGS 317

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412 321 APVGFSRVSRHGVPWMTVLLMAVALLLGVALNYLIPQSVFLLIASIATFATVWVWLMILLAQVGMRRRMGPRQVAALKFP 400
Cdd:PRK10580 318 APKIFSKTSRRGIPWVTVLVMTTALLFAVYLNYIMPENVFLVIASLATFATVWVWIMILLSQIAFRRRLPPEEVKALKFK 397

                        410       420       430       440       450
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 489192412 401 VPLWPFAPAAAIVFMLFIFVVLGYFPDTRPALWVGAIWIALLVIAYRRWVRPKGDAAH 458
Cdd:PRK10580 398 VPGGVATTIGGLIFLVFIIGLIGYHPDTRISLYVGFAWIVLLLIGWMFKRRHDRQLAE 455
GABAperm TIGR01773
gamma-aminobutyrate permease; GABA permease (gabP) catalyzes the translocation of ...
 7-449 2.30e-88

gamma-aminobutyrate permease; GABA permease (gabP) catalyzes the translocation of 4-aminobutyrate (GABA) across the plasma membrane, with homologues expressed in Gram-negative and Gram-positive organisms. This permease is a highly hydrophobic transmembrane protein consisting of 12 transmembrane domains with hydrophilic N- and C-terminal ends. Induced by nitrogen-limited culture conditions in both Escherichia coli and Bacillus subtilis, gabP is an energy dependent transport system stimulated by membrane potential and has been observed adjacent and distant from other GABA degradation proteins. GabP is highly homologous to amino acid permeases from B. subtilis, E. coli, as well as to other members of the amino acid permease family (pfam00324). A member of the APC (amine-polyamine-choline) transporter superfamily, GABA permease possesses a "consensus amphiphatic region" (CAR) found to be evolutionarily conserved within this transport family. This amphiphatic region is located between helix 8 and cytoplasmic loop 8-9, forming a potential channel domain and suggested to play a significant role in ligand recognition and translocation. Unique to GABA permeases, a conserved cysteine residue (CYS-300, E.coli) located at the beginning of the amphiphatic domain, has been determined to be critical for catalytic specificity. [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273797  Cd Length: 452  Bit Score: 277.14  E-value: 2.30e-88
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412    7 LRRGLNARHIRFMALGSAIGTGLFYGSASAIQMAGPAVLLAYLIAGAAVYMVMRALGEMAVHEPVSGSFGHYASSYLGPL 86
Cdd:TIGR01773  10 LPNGLKTRHVTMLSIAGVIGAGLFVGSGSAIASAGPAALLAYLLAGLLVVFIMRMLGEMAVANPDTGSFSTYADDAIGRW 89

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412   87 AGFVTGWTYAFEMIIVCLADVTAFGIYMGFWFPDVPRWIWVLSIVLFIGGLNLCHVKVFGELEFWLSLVKVGAIVAMILA 166
Cdd:TIGR01773  90 AGFTIGWLYWWFWVLVIPLEAIAAAGILQYWFPDIPLWLFSLILTIVLTLTNLYSVKSYGEFEFWFALIKVIAIIAFIIL 169

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412  167 GlGIMFFGFSLGgaaTSATGVHNLWQHGGFLPNGWAGLVASLSVVVFAFGGIEIIGITAGEAQDPQRVIPRAINAVPLRI 246
Cdd:TIGR01773 170 G-AVAIFGFAPG---SEVSGFSNLTGKGGFFPNGIGAVLLAILVTMFSFMGTEIVTIAAAESSNPIKSITRATNSVIWRI 245

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412  247 LLFYVLTLFVLMAIFPWQQIGSNGS-PFVQIFDGLGIESAAAILNVVVITAAISAINSDIFGAGRMLYGMARQGQAPVGF 325
Cdd:TIGR01773 246 IVFYLGSIFIVVALLPWNSPNLLEVgSYVAVLELLGIPHAKLIMDFVVLTAVLSCLNSALYTTSRMLYSLAERGDAPRVF 325

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412  326 SRVSRHGVPWMTVLLMAVALLLGVALNYLIPQSVFLLIASIATFATVWVWLMILLAQVGMRRRMGPRQvAALKFPVPLWP 405
Cdd:TIGR01773 326 MKLNKKGVPVQAVLASTFFSFLTVVVNYFAPDKVFLFLVNSSGAIALLVYLVIAVSQLRMRKKLKANG-EAIKIRMWLYP 404

                         410       420       430       440
                  ....*....|....*....|....*....|....*....|....*..
gi 489192412  406 FAPAAAIVFMLFIFVVLGYFPDTRPALW---VGAIWIALLVIAYRRW 449
Cdd:TIGR01773 405 WLTWLVIIFICGILVSMLFIPSMRDEVLltgLLTIIVLCSYLVFARR 451
AA_permease pfam00324
Amino acid permease;
15-430 1.54e-85

Amino acid permease;


Pssm-ID: 366028 [Multi-domain]  Cd Length: 467  Bit Score: 270.35  E-value: 1.54e-85
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412   15 HIRFMALGSAIGTGLFYGSASAIQMAGPA-VLLAYLIAGAAVYMVMRALGEMAVHEPVSGSFGHYASSYLGPLAGFVTGW 93
Cdd:pfam00324   1 HVQMIALGGVIGTGLFVGSGSVLGQAGPAgALLGYLISGVVIFLVMLSLGEISTNGPVSGGFYTYASRFLGPSLGFATGW 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412   94 TYAFEMIIVCLADVTAFGIYMGFW--FPDVPR-WIWVLSIVLFIGGLNLCHVKVFGELEFWLSLVKVGAIVAMIlaglgI 170
Cdd:pfam00324  81 NYWLSWITVLALELTAASILIQFWelVPDIPYlWVWGAVFLVLLTIINLVGVKWYGEAEFWFALIKIIAIIGFI-----I 155

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412  171 MFFGFSLGGAATSATGVHNLWQHGG--FLPNGWAGLVAS-LSVVVFAFGGIEIIGITAGEAQDPQRVIPRAINAVPLRIL 247
Cdd:pfam00324 156 VGIILLSGGNPNDGAIFRYLGDNGGknNFPPGFGKGFISvFVIAFFAFTGIELVGIAAGEVKNPEKSIPKAILQVIWRIT 235

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412  248 LFYVLTLFVLMAIFPW------QQIGSNGSPFVQIFDGLGIESAAAILNVVVITAAISAINSDIFGAGRMLYGMARQGQA 321
Cdd:pfam00324 236 IFYILSLLAIGLLVPWndpgllNDSASAASPFVIFFKFLGISGLAPLINAVILTAALSAANSSLYSGSRMLYSLARDGLA 315

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412  322 PVGFSRVSRHGVPWMTVLLMAVALLLGVALNYLIPQSVFLLIASIATFATVWVWLMILLAQVGMRRRMGPRQVAALKFPV 401
Cdd:pfam00324 316 PKFLKKVDKRGVPLRAILVSMVISLLALLLASLNPAIVFNFLLAISGLSGLIVWGLISLSHLRFRKAFKYQGRSIDELPF 395

                         410       420       430
                  ....*....|....*....|....*....|.
gi 489192412  402 PLW--PFAPAAAIVFMLFIFVVLGYFPDTRP 430
Cdd:pfam00324 396 KAPlgPLGVILGLAAIIIILIIQFLYAFLPV 426
 
Name Accession Description Interval E-value
AnsP COG1113
L-asparagine transporter or related permease [Amino acid transport and metabolism];
2-454 0e+00

L-asparagine transporter or related permease [Amino acid transport and metabolism];


Pssm-ID: 440730 [Multi-domain]  Cd Length: 458  Bit Score: 615.21  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412   2 THDTGLRRGLNARHIRFMALGSAIGTGLFYGSASAIQMAGPAVLLAYLIAGAAVYMVMRALGEMAVHEPVSGSFGHYASS 81
Cdd:COG1113    8 SEEEGLKRGLKNRHIQMIALGGAIGTGLFLGSGKAIALAGPAVLLSYLIAGLIVFLVMRALGEMAVANPVSGSFSDYARE 87

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412  82 YLGPLAGFVTGWTYAFEMIIVCLADVTAFGIYMGFWFPDVPRWIWVLSIVLFIGGLNLCHVKVFGELEFWLSLVKVGAIV 161
Cdd:COG1113   88 YLGPWAGFVTGWLYWFFWVLVGMAEATAVGIYLQFWFPDVPQWVWALVFLVLLTAINLLSVKLFGEFEFWFALIKVVAIV 167

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412 162 AMILAGLGIMFFGFSLGGAAtsATGVHNLWQHGGFLPNGWAGLVASLSVVVFAFGGIEIIGITAGEAQDPQRVIPRAINA 241
Cdd:COG1113  168 AFIVVGLLLIFFGFGLPGGP--PAGLSNLWDHGGFFPNGIGGVLAALQIVVFAFGGIELVGIAAAEAKDPEKTIPKAINS 245

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412 242 VPLRILLFYVLTLFVLMAIFPWQQIGSNGSPFVQIFDGLGIESAAAILNVVVITAAISAINSDIFGAGRMLYGMARQGQA 321
Cdd:COG1113  246 VIWRILLFYVGSLFVILALVPWNQIGAGGSPFVTVFSLLGIPAAAGIMNFVVLTAALSSLNSGLYSTSRMLYSLAERGDA 325

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412 322 PVGFSRVSRHGVPWMTVLLMAVALLLGVALNYLIPQSVFLLIASIATFATVWVWLMILLAQVGMRRRMGPRQVAALKFPV 401
Cdd:COG1113  326 PKFFGKLSKRGVPVRAILLSAVVLLIGVVLNYLLPEKAFTFLLSISGFGALFVWLMILVSQLKFRRRLPREGAAALKFKM 405

                        410       420       430       440       450
                 ....*....|....*....|....*....|....*....|....*....|...
gi 489192412 402 PLWPFAPAAAIVFMLFIFVVLGYFPDTRPALWVGAIWIALLVIAYRRWVRPKG 454
Cdd:COG1113  406 PGFPYTSYLTLAFLAAVLVLMAFDPDTRIALIVGPVWLALLVVGYFLVRRRRA 458
proY PRK10580
putative proline-specific permease; Provisional
 1-458 0e+00

putative proline-specific permease; Provisional


Pssm-ID: 182566 [Multi-domain]  Cd Length: 457  Bit Score: 562.52  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412   1 MTHDTGLRRGLNARHIRFMALGSAIGTGLFYGSASAIQMAGPAVLLAYLIAGAAVYMVMRALGEMAVHEPVSGSFGHYAS 80
Cdd:PRK10580   1 MESKNKLKRGLSTRHIRFMALGSAIGTGLFYGSADAIKMAGPSVLLAYIIGGVAAYIIMRALGEMSVHNPAASSFSRYAQ 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412  81 SYLGPLAGFVTGWTYAFEMIIVCLADVTAFGIYMGFWFPDVPRWIWVLSIVLFIGGLNLCHVKVFGELEFWLSLVKVGAI 160
Cdd:PRK10580  81 ENLGPLAGYITGWTYCFEILIVAIADVTAFGIYMGVWFPTVPHWIWVLSVVLIICAVNLMSVKVFGELEFWFSFFKVATI 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412 161 VAMILAGLGIMFFGFSLGGaatSATGVHNLWQHGGFLPNGWAGLVASLSVVVFAFGGIEIIGITAGEAQDPQRVIPRAIN 240
Cdd:PRK10580 161 IIMIVAGIGIIIWGIGNGG---QPTGIHNLWSNGGFFSNGWLGMVMSLQMVMFAYGGIEIIGITAGEAKDPEKSIPRAIN 237

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412 241 AVPLRILLFYVLTLFVLMAIFPWQQIGSNGSPFVQIFDGLGIESAAAILNVVVITAAISAINSDIFGAGRMLYGMARQGQ 320
Cdd:PRK10580 238 SVPMRILVFYVGTLFVIMSIYPWNQVGTNGSPFVLTFQHMGITFAASILNFVVLTASLSAINSDVFGVGRMLHGMAEQGS 317

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412 321 APVGFSRVSRHGVPWMTVLLMAVALLLGVALNYLIPQSVFLLIASIATFATVWVWLMILLAQVGMRRRMGPRQVAALKFP 400
Cdd:PRK10580 318 APKIFSKTSRRGIPWVTVLVMTTALLFAVYLNYIMPENVFLVIASLATFATVWVWIMILLSQIAFRRRLPPEEVKALKFK 397

                        410       420       430       440       450
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 489192412 401 VPLWPFAPAAAIVFMLFIFVVLGYFPDTRPALWVGAIWIALLVIAYRRWVRPKGDAAH 458
Cdd:PRK10580 398 VPGGVATTIGGLIFLVFIIGLIGYHPDTRISLYVGFAWIVLLLIGWMFKRRHDRQLAE 455
LysP COG0833
Amino acid permease [Amino acid transport and metabolism];
1-453 2.11e-139

Amino acid permease [Amino acid transport and metabolism];


Pssm-ID: 440595 [Multi-domain]  Cd Length: 467  Bit Score: 408.41  E-value: 2.11e-139
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412   1 MTHDTGLRRGLNARHIRFMALGSAIGTGLFYGSASAIQMAGP-AVLLAYLIAGAAVYMVMRALGEMAVHEPVSGSFGHYA 79
Cdd:COG0833    4 SEKQNKLKRGLKSRHLSMIALGGVIGTGLFLASGYTISQAGPgGALLAYLLGGLMVYFLMTSLGELAVAMPVSGSFQTYA 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412  80 SSYLGPLAGFVTGWTYAFEMIIVCLADVTAFGIYMGFWFPDVPRWIWVLSIVLFIGGLNLCHVKVFGELEFWLSLVKVGA 159
Cdd:COG0833   84 TRFIDPAFGFAVGWNYWLNWAITVAAELTAAGIIMQYWFPDVPVWIWSLLFLALIFLLNALSVKAFGESEFWFSLIKVIT 163

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412 160 IVAMILAGLGiMFFGFsLGGaatSATGVHNLWQHGGFLPNGWAGLVASLSVVVFAFGGIEIIGITAGEAQDPQRVIPRAI 239
Cdd:COG0833  164 VIAFIIVGLL-MIFGI-IGG---HAPGFSNFTTGDGPFPGGFLAILGVMMIVGFSFQGTELIGIAAGESENPEKTIPKAI 238

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412 240 NAVPLRILLFYVLTLFVLMAIFPWQQIGSNGSPFVQIFDGLGIESAAAILNVVVITAAISAINSDIFGAGRMLYGMARQG 319
Cdd:COG0833  239 RQVFWRILLFYILAIFVIAALIPYTDAGVAESPFTLVFERAGIPYAADIMNAVILTAVLSAGNSGLYASTRMLWSLAKEG 318

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412 320 QAPVGFSRVSRHGVPWMTVLLMAVALLLGVALNYLIPQSVFLLIASIATFATVWVWLMILLAQVGMRRRM--GPRQVAAL 397
Cdd:COG0833  319 MAPKIFAKLNKRGVPLNALLATMAVGLLALLSSFFGAGTVYLWLLSISGLTGFIAWLGIAISHYRFRRAYvaQGGDLEDL 398

                        410       420       430       440       450
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 489192412 398 KFPVPLWPFAPAAAIVFMLFIFVVLGYFPDTRPALWVGAIWIALLVIAYRRWVRPK 453
Cdd:COG0833  399 KYKAPLFPFGPIFAFILCLIVIIGQAFDPEQRIALYIGIPFFLACYLGYKLKKKTK 454
PRK10249 PRK10249
phenylalanine transporter; Provisional
 7-452 7.28e-128

phenylalanine transporter; Provisional


Pssm-ID: 236667  Cd Length: 458  Bit Score: 378.56  E-value: 7.28e-128
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412   7 LRRGLNARHIRFMALGSAIGTGLFYGSASAIQMAGPAVLLAYLIAGAAVYMVMRALGEMAVHEPVSGSFGHYASSYLGPL 86
Cdd:PRK10249  19 LHRGLHNRHIQLIALGGAIGTGLFLGIGPAIQMAGPAVLLGYGVAGIIAFLIMRQLGEMVVEEPVSGSFAHFAYKYWGPF 98

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412  87 AGFVTGWTYAFEMIIVCLADVTAFGIYMGFWFPDVPRWIWVLSIVLFIGGLNLCHVKVFGELEFWLSLVKVGAIVAMILA 166
Cdd:PRK10249  99 AGFLSGWNYWVMFVLVGMAELTAAGIYMQYWFPDVPTWIWAAAFFIIINAVNLVNVRLYGETEFWFALIKVLAIIGMIGF 178

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412 167 GLGIMFfgfslGGAATSATGVHNLWQHGGFLPNGWAGLVASLSVVVFAFGGIEIIGITAGEAQDPQRVIPRAINAVPLRI 246
Cdd:PRK10249 179 GLWLLF-----SGHGGEKASIDNLWRYGGFFATGWNGLILSLAVIMFSFGGLELIGITAAEARDPEKSIPKAVNQVVYRI 253

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412 247 LLFYVLTLFVLMAIFPWQQIGSNGSPFVQIFDGLGIESAAAILNVVVITAAISAINSDIFGAGRMLYGMARQGQAPVGFS 326
Cdd:PRK10249 254 LLFYIGSLVVLLALYPWVEVKSNSSPFVMIFHNLDSNVVASALNFVILVASLSVYNSGVYSNSRMLFGLSVQGNAPKFLT 333

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412 327 RVSRHGVPWMTVLLMAVALLLGVALNYLIPQSVFLLIASIATFATVWVWLMILLAQVGMRRRMgPRQVAALKFPVPLWPF 406
Cdd:PRK10249 334 RVSRRGVPINSLMLSGAITSLVVLINYLLPQKAFGLLMALVVATLLLNWIMICLAHLRFRAAM-RRQGRETQFKALLYPF 412

                        410       420       430       440
                 ....*....|....*....|....*....|....*....|....*.
gi 489192412 407 APAAAIVFMLFIFVVLGYFPDTRPALWVGAIWIALLVIAYRRWVRP 452
Cdd:PRK10249 413 GNYLCIAFLGMILLLMCTMDDMRLSAILLPVWIVFLFVAFKTLRRK 458
PRK10238 PRK10238
aromatic amino acid transporter AroP;
3-446 7.99e-126

aromatic amino acid transporter AroP;


Pssm-ID: 182324 [Multi-domain]  Cd Length: 456  Bit Score: 373.52  E-value: 7.99e-126
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412   3 HDTGLRRGLNARHIRFMALGSAIGTGLFYGSASAIQMAGPAVLLAYLIAGAAVYMVMRALGEMAVHEPVSGSFGHYASSY 82
Cdd:PRK10238   6 HGEQLKRGLKNRHIQLIALGGAIGTGLFLGSASVIQSAGPGIILGYAIAGFIAFLIMRQLGEMVVEEPVAGSFSHFAYKY 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412  83 LGPLAGFVTGWTYAFEMIIVCLADVTAFGIYMGFWFPDVPRWIWVLSIVLFIGGLNLCHVKVFGELEFWLSLVKVGAIVA 162
Cdd:PRK10238  86 WGSFAGFASGWNYWVLYVLVAMAELTAVGKYIQFWYPEIPTWVSAAVFFVVINAINLTNVKVFGEMEFWFAIIKVIAVVA 165

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412 163 MILAGLGIMFfgfslGGAATSATGVHNLWQHGGFLPNGWAGLVASLSVVVFAFGGIEIIGITAGEAQDPQRVIPRAINAV 242
Cdd:PRK10238 166 MIIFGGWLLF-----SGNGGPQATVSNLWDQGGFLPHGFTGLVMMMAIIMFSFGGLELVGITAAEADNPEQSIPKATNQV 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412 243 PLRILLFYVLTLFVLMAIFPWQQIGSNGSPFVQIFDGLGIESAAAILNVVVITAAISAINSDIFGAGRMLYGMARQGQAP 322
Cdd:PRK10238 241 IYRILIFYIGSLAVLLSLMPWTRVTADTSPFVLIFHELGDTFVANALNIVVLTAALSVYNSCVYCNSRMLFGLAQQGNAP 320

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412 323 VGFSRVSRHGVPWMTVLLMAVALLLGVALNYLIPQSVFLLIASIATFATVWVWLMILLAQVgMRRRMGPRQVAALKFPVP 402
Cdd:PRK10238 321 KALASVDKRGVPVNTILVSALVTALCVLINYLAPESAFGLLMALVVSALVINWAMISLAHM-KFRRAKQEQGVVTRFPAL 399

                        410       420       430       440
                 ....*....|....*....|....*....|....*....|....
gi 489192412 403 LWPFAPAAAIVFMLFIFVVLGYFPDTRPALWVGAIWIALLVIAY 446
Cdd:PRK10238 400 LYPLGNWICLLFMAAVLVIMLMTPGMAISVYLIPVWLIVLGIGY 443
PRK11049 PRK11049
D-alanine/D-serine/glycine permease; Provisional
 7-447 6.10e-123

D-alanine/D-serine/glycine permease; Provisional


Pssm-ID: 236830  Cd Length: 469  Bit Score: 366.37  E-value: 6.10e-123
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412   7 LRRGLNARHIRFMALGSAIGTGLFYGSASAIQMAGPAVLLAYLIAGAAVYMVMRALGEMAVHEPVSGSFGHYASSYLGPL 86
Cdd:PRK11049  18 LRRNLTNRHIQLIAIGGAIGTGLFMGSGKTISLAGPSIIFVYMIIGFMLFFVMRAMGELLLSNLEYKSFSDFASDLLGPW 97

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412  87 AGFVTGWTYAFEMIIVCLADVTAFGIYMGFWFPDVPRWIWVLSIVLFIGGLNLCHVKVFGELEFWLSLVKVGAIVAMILA 166
Cdd:PRK11049  98 AGYFTGWTYWFCWVVTGIADVVAITAYAQFWFPDLSDWVASLAVVLLLLSLNLATVKMFGEMEFWFAMIKIVAIVALIVV 177

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412 167 GLGIMFFGFSLGGAATSAtgVHNLWQHGGFLPNGWAGLVASLSVVVFAFGGIEIIGITAGEAQDPQRVIPRAINAVPLRI 246
Cdd:PRK11049 178 GLVMVAMHFQSPTGVEAS--FAHLWNDGGMFPKGLSGFFAGFQIAVFAFVGIELVGTTAAETKDPEKSLPRAINSIPIRI 255

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412 247 LLFYVLTLFVLMAIFPWQQIGSNGSPFVQIFDGLGIESAAAILNVVVITAAISAINSDIFGAGRMLYGMARQGQAPVGFS 326
Cdd:PRK11049 256 IMFYVFALIVIMSVTPWSSVVPDKSPFVELFVLVGLPAAASVINFVVLTSAASSANSGVFSTSRMLFGLAQEGVAPKAFA 335

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412 327 RVSRHGVPWMTVLLMAVALLLGVALNYLIPQ--SVFLLIASIATFATVWVWLMILLAQVGMRRRMgPRQVAALKFPVPLW 404
Cdd:PRK11049 336 KLSKRAVPAKGLTFSCICLLGGVVLLYVNPSviGAFTLVTTVSAILFMFVWTIILCSYLVYRKQR-PHLHEKSIYKMPLG 414

                        410       420       430       440
                 ....*....|....*....|....*....|....*....|...
gi 489192412 405 PFAPAAAIVFMLFIFVVLGYFPDTRPALWVGAIWIALLVIAYR 447
Cdd:PRK11049 415 KLMCWVCMAFFAFVLVLLTLEDDTRQALIVTPLWFIALGLGYL 457
PRK10746 PRK10746
putative transport protein YifK; Provisional
 6-446 2.49e-118

putative transport protein YifK; Provisional


Pssm-ID: 182694  Cd Length: 461  Bit Score: 354.51  E-value: 2.49e-118
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412   6 GLRRGLNARHIRFMALGSAIGTGLFYGSASAIQMAGPAVLLAYLIAGAAVYMVMRALGEMAVHEPVSGSFGHYASSYLGP 85
Cdd:PRK10746   7 ELQRGLEARHIELIALGGTIGVGLFMGAASTLKWAGPSVLLAYIIAGLFVFFIMRSMGEMLFLEPVTGSFAVYAHRYMSP 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412  86 LAGFVTGWTYAFEMIIVCLADVTAFGIYMGFWFPDVPRWIWVLSIVLFIGGLNLCHVKVFGELEFWLSLVKVGAIVAMIL 165
Cdd:PRK10746  87 FFGYLTAWSYWFMWMAVGISEITAIGVYVQFWFPEMAQWIPALIAVALVALANLAAVRLYGEIEFWFAMIKVTTIIVMIV 166

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412 166 AGLGIMFFGFSLGGaatSATGVHNLWQHGGFLPNGWAGLVASLSVVVFAFGGIEIIGITAGEAQDPQRVIPRAINAVPLR 245
Cdd:PRK10746 167 IGLGVIFFGFGNGG---QSIGFSNLTEHGGFFAGGWKGFLTALCIVVASYQGVELIGITAGEAKNPQVTLRSAVGKVLWR 243

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412 246 ILLFYVLTLFVLMAIFPWQQIGSNGSPFVQIFDGLGIESAAAILNVVVITAAISAINSDIFGAGRMLYGMARQGQAPVGF 325
Cdd:PRK10746 244 ILIFYVGAIFVIVTIFPWNEIGSNGSPFVLTFAKIGITAAAGIINFVVLTAALSGCNSGMYSCGRMLYALAKNRQLPAAM 323

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412 326 SRVSRHGVPWMTVLLMAVALLLGVALNYLI--PQSVFLLIASIATFATVWVWLMILLAQVGMRRRMgPRQVAALKFPVPL 403
Cdd:PRK10746 324 AKVSRHGVPVAGVAVSILILLVGSCLNYIIpnPQRVFVYVYSASVLPGMVPWFVILISQLRFRRAH-KAAIASHPFRSIL 402

                        410       420       430       440
                 ....*....|....*....|....*....|....*....|...
gi 489192412 404 WPFAPAAAIVFMLFIFVVLGYFPDTRPALWVGAIWIALLVIAY 446
Cdd:PRK10746 403 FPWANYLTMAFLICVLIGMYFNEDTRMSLFVGIIFLLAVTLIY 445
PRK11387 PRK11387
S-methylmethionine permease;
7-446 4.76e-90

S-methylmethionine permease;


Pssm-ID: 236904  Cd Length: 471  Bit Score: 282.12  E-value: 4.76e-90
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412   7 LRRGLNARHIRFMALGSAIGTGLFYGSASAIQMAGPA-VLLAYLIAGAAVYMVMRALGEMAVHEPVSGSFGHYASSYLGP 85
Cdd:PRK11387  12 FKRTMKVRHLVMLSLGGVIGTGLFFNTGYIISTTGAAgTLLAYLIGALVVYLVMQCLGELSVAMPETGAFHVYAARYLGP 91

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412  86 LAGFVTGWTYAFEMIIVCLADVTAFGIYMGFWFPDVPRWIWVLSIVLFIGGLNLCHVKVFGELEFWLSLVKVGAIVAMIL 165
Cdd:PRK11387  92 ATGYTVAWLYWLTWTVALGSSLTAAGFCMQYWFPQVPVWPWCLLFCALIFGLNVVSTRFFAEGEFWFSLIKVVTILAFIV 171

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412 166 AGLGIMFfGFSLGGAATSATGVHNLWQHGGFlPNGWAGLVASLSVVVFAFGGIEIIGITAGEAQDPQRVIPRAINAVPLR 245
Cdd:PRK11387 172 LGGAAIF-GFIPMQDGSPAPGLRNLTAEGWF-PHGGLPILMTMVAVNFAFSGTELIGIAAGETENPAKVIPVAIRTTIAR 249

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412 246 ILLFYVLTLFVLMAIFPWQQIGSNGSPFVQIFDGLGIESAAAILNVVVITAAISAINSDIFGAGRMLYGMARQGQAPVGF 325
Cdd:PRK11387 250 LVIFFVGTVLVLAALIPMQQAGVEKSPFVLVFEKVGIPYAADIFNFVILTAILSAANSGLYASGRMLWSLSNEGTLPACF 329

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412 326 SRVSRHGVPWMTVLLMAVALLLGVALNYLIPQSVFLLIASIATFATVWVWLMILLAQVGMRRRM--GPRQVAALKFPVPL 403
Cdd:PRK11387 330 ARLTKRGIPLTALSVSMLGGLLALFSSVVAPDTVFVALSAISGFAVVAVWLSICASHFMFRRRHlrDGKALSELAYRAPW 409

                        410       420       430       440
                 ....*....|....*....|....*....|....*....|...
gi 489192412 404 WPFAPAAAIVFMLFIFVVLGYFPDTRPALWVGAIWIALLVIAY 446
Cdd:PRK11387 410 YPLTPILGFVLCLLACVGLAFDPSQRIALWCGIPFVALCYGAY 452
GABAperm TIGR01773
gamma-aminobutyrate permease; GABA permease (gabP) catalyzes the translocation of ...
 7-449 2.30e-88

gamma-aminobutyrate permease; GABA permease (gabP) catalyzes the translocation of 4-aminobutyrate (GABA) across the plasma membrane, with homologues expressed in Gram-negative and Gram-positive organisms. This permease is a highly hydrophobic transmembrane protein consisting of 12 transmembrane domains with hydrophilic N- and C-terminal ends. Induced by nitrogen-limited culture conditions in both Escherichia coli and Bacillus subtilis, gabP is an energy dependent transport system stimulated by membrane potential and has been observed adjacent and distant from other GABA degradation proteins. GabP is highly homologous to amino acid permeases from B. subtilis, E. coli, as well as to other members of the amino acid permease family (pfam00324). A member of the APC (amine-polyamine-choline) transporter superfamily, GABA permease possesses a "consensus amphiphatic region" (CAR) found to be evolutionarily conserved within this transport family. This amphiphatic region is located between helix 8 and cytoplasmic loop 8-9, forming a potential channel domain and suggested to play a significant role in ligand recognition and translocation. Unique to GABA permeases, a conserved cysteine residue (CYS-300, E.coli) located at the beginning of the amphiphatic domain, has been determined to be critical for catalytic specificity. [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273797  Cd Length: 452  Bit Score: 277.14  E-value: 2.30e-88
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412    7 LRRGLNARHIRFMALGSAIGTGLFYGSASAIQMAGPAVLLAYLIAGAAVYMVMRALGEMAVHEPVSGSFGHYASSYLGPL 86
Cdd:TIGR01773  10 LPNGLKTRHVTMLSIAGVIGAGLFVGSGSAIASAGPAALLAYLLAGLLVVFIMRMLGEMAVANPDTGSFSTYADDAIGRW 89

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412   87 AGFVTGWTYAFEMIIVCLADVTAFGIYMGFWFPDVPRWIWVLSIVLFIGGLNLCHVKVFGELEFWLSLVKVGAIVAMILA 166
Cdd:TIGR01773  90 AGFTIGWLYWWFWVLVIPLEAIAAAGILQYWFPDIPLWLFSLILTIVLTLTNLYSVKSYGEFEFWFALIKVIAIIAFIIL 169

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412  167 GlGIMFFGFSLGgaaTSATGVHNLWQHGGFLPNGWAGLVASLSVVVFAFGGIEIIGITAGEAQDPQRVIPRAINAVPLRI 246
Cdd:TIGR01773 170 G-AVAIFGFAPG---SEVSGFSNLTGKGGFFPNGIGAVLLAILVTMFSFMGTEIVTIAAAESSNPIKSITRATNSVIWRI 245

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412  247 LLFYVLTLFVLMAIFPWQQIGSNGS-PFVQIFDGLGIESAAAILNVVVITAAISAINSDIFGAGRMLYGMARQGQAPVGF 325
Cdd:TIGR01773 246 IVFYLGSIFIVVALLPWNSPNLLEVgSYVAVLELLGIPHAKLIMDFVVLTAVLSCLNSALYTTSRMLYSLAERGDAPRVF 325

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412  326 SRVSRHGVPWMTVLLMAVALLLGVALNYLIPQSVFLLIASIATFATVWVWLMILLAQVGMRRRMGPRQvAALKFPVPLWP 405
Cdd:TIGR01773 326 MKLNKKGVPVQAVLASTFFSFLTVVVNYFAPDKVFLFLVNSSGAIALLVYLVIAVSQLRMRKKLKANG-EAIKIRMWLYP 404

                         410       420       430       440
                  ....*....|....*....|....*....|....*....|....*..
gi 489192412  406 FAPAAAIVFMLFIFVVLGYFPDTRPALW---VGAIWIALLVIAYRRW 449
Cdd:TIGR01773 405 WLTWLVIIFICGILVSMLFIPSMRDEVLltgLLTIIVLCSYLVFARR 451
PRK15049 PRK15049
L-asparagine permease;
3-424 5.57e-88

L-asparagine permease;


Pssm-ID: 185009  Cd Length: 499  Bit Score: 277.66  E-value: 5.57e-88
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412   3 HDTGLRRGLNARHIRFMALGSAIGTGLFYGSASAIQMAGPAVLLAYLIAGAAVYMVMRALGEMAVHEPVSGSFGHYASSY 82
Cdd:PRK15049  22 HEEGYHKAMGNRQVQMIAIGGAIGTGLFLGAGARLQMAGPALALVYLICGLFSFFILRALGELVLHRPSSGSFVSYAREF 101

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412  83 LGPLAGFVTGWTYAFEMIIVCLADVTAFGIYMGFW--FPDVPRWIWVLSIVLFIGGLNLCHVKVFGELEFWLSLVKVGAI 160
Cdd:PRK15049 102 LGEKAAYVAGWMYFINWAMTGIVDITAVALYMHYWgaFGGVPQWVFALAALTIVGTMNMIGVKWFAEMEFWFALIKVLAI 181

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412 161 VAMILAGLGIMFFGFSLGGaatSATGVHNLWQHGGFLPNGWAGLVASLSVVVFAFGGIEIIGITAGEAQDPQRVIPRAIN 240
Cdd:PRK15049 182 VTFLVVGTVFLGSGQPLDG---NTTGFHLITDNGGFFPHGLLPALVLIQGVVFAFASIEMVGTAAGECKDPQTMVPKAIN 258

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412 241 AVPLRILLFYVLTLFVLMAIFPWQQIGSNGSPFVQIFDGLGIESAAAILNVVVITAAISAINSDIFGAGRMLYGMARQGQ 320
Cdd:PRK15049 259 SVIWRIGLFYVGSVVLLVMLLPWSAYQAGQSPFVTFFSKLGVPYIGSIMNIVVLTAALSSLNSGLYCTGRILRSMAMGGS 338

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412 321 APVGFSRVSRHGVPWMTVLLMAVALLLGVALNYLIPQSVFLLIASIATFATVWVWLMILLAQVGMRRRMGPRQVAALKFP 400
Cdd:PRK15049 339 APSFMAKMSRQHVPYAGILATLVVYVVGVFLNYLVPSRVFEIVLNFASLGIIASWAFIIVCQMRLRKAIKEGKAADVSFK 418

                        410       420
                 ....*....|....*....|....
gi 489192412 401 VPLWPFAPAAAIVFMLFIFVVLGY 424
Cdd:PRK15049 419 LPGAPFTSWLTLLFLLSVLVLMAF 442
AA_permease pfam00324
Amino acid permease;
15-430 1.54e-85

Amino acid permease;


Pssm-ID: 366028 [Multi-domain]  Cd Length: 467  Bit Score: 270.35  E-value: 1.54e-85
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412   15 HIRFMALGSAIGTGLFYGSASAIQMAGPA-VLLAYLIAGAAVYMVMRALGEMAVHEPVSGSFGHYASSYLGPLAGFVTGW 93
Cdd:pfam00324   1 HVQMIALGGVIGTGLFVGSGSVLGQAGPAgALLGYLISGVVIFLVMLSLGEISTNGPVSGGFYTYASRFLGPSLGFATGW 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412   94 TYAFEMIIVCLADVTAFGIYMGFW--FPDVPR-WIWVLSIVLFIGGLNLCHVKVFGELEFWLSLVKVGAIVAMIlaglgI 170
Cdd:pfam00324  81 NYWLSWITVLALELTAASILIQFWelVPDIPYlWVWGAVFLVLLTIINLVGVKWYGEAEFWFALIKIIAIIGFI-----I 155

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412  171 MFFGFSLGGAATSATGVHNLWQHGG--FLPNGWAGLVAS-LSVVVFAFGGIEIIGITAGEAQDPQRVIPRAINAVPLRIL 247
Cdd:pfam00324 156 VGIILLSGGNPNDGAIFRYLGDNGGknNFPPGFGKGFISvFVIAFFAFTGIELVGIAAGEVKNPEKSIPKAILQVIWRIT 235

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412  248 LFYVLTLFVLMAIFPW------QQIGSNGSPFVQIFDGLGIESAAAILNVVVITAAISAINSDIFGAGRMLYGMARQGQA 321
Cdd:pfam00324 236 IFYILSLLAIGLLVPWndpgllNDSASAASPFVIFFKFLGISGLAPLINAVILTAALSAANSSLYSGSRMLYSLARDGLA 315

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412  322 PVGFSRVSRHGVPWMTVLLMAVALLLGVALNYLIPQSVFLLIASIATFATVWVWLMILLAQVGMRRRMGPRQVAALKFPV 401
Cdd:pfam00324 316 PKFLKKVDKRGVPLRAILVSMVISLLALLLASLNPAIVFNFLLAISGLSGLIVWGLISLSHLRFRKAFKYQGRSIDELPF 395

                         410       420       430
                  ....*....|....*....|....*....|.
gi 489192412  402 PLW--PFAPAAAIVFMLFIFVVLGYFPDTRP 430
Cdd:pfam00324 396 KAPlgPLGVILGLAAIIIILIIQFLYAFLPV 426
PRK10836 PRK10836
lysine transporter; Provisional
 2-418 2.16e-77

lysine transporter; Provisional


Pssm-ID: 182767  Cd Length: 489  Bit Score: 249.74  E-value: 2.16e-77
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412   2 THDTGLRRGLNARHIRFMALGSAIGTGLFYGSASAIQMAGPA-VLLAYLIAGAAVYMVMRALGEMAVHEPVSGSFGHYAS 80
Cdd:PRK10836   8 TEAPGLRRELKARHLTMIAIGGSIGTGLFVASGATISQAGPGgALLSYMLIGLMVYFLMTSLGELAAYMPVSGSFATYGQ 87

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412  81 SYLGPLAGFVTGWTYAFEMIIVCLADVTAFGIYMGFWFPDVPRWIWVLSIVLFIGGLNLCHVKVFGELEFWLSLVKVGAI 160
Cdd:PRK10836  88 NYVEEGFGFALGWNYWYNWAVTIAVDLVAAQLVMSWWFPDTPGWIWSALFLGVIFLLNYISVRGFGEAEYWFSLIKVTTV 167

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412 161 VAMILAGLgIMFFGFSLGGaatSATGVHNlWQHG-GFLPNGWAGLVASLSVVVFAFGGIEIIGITAGEAQDPQRVIPRAI 239
Cdd:PRK10836 168 IVFIIVGV-LMIIGIFKGA---EPAGWSN-WTIGdAPFAGGFAAMIGVAMIVGFSFQGTELIGIAAGESEDPAKNIPRAV 242

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412 240 NAVPLRILLFYVLTLFVLMAIFPWQ--QIGSNG------SPFVQIFDGLGIESAAAILNVVVITAAISAINSDIFGAGRM 311
Cdd:PRK10836 243 RQVFWRILLFYVFAILIISLIIPYTdpSLLRNDvkdisvSPFTLVFQHAGLLSAAAVMNAVILTAVLSAGNSGMYASTRM 322

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412 312 LYGMARQGQAPVGFSRVSRHGVPWMTVLLMAVALLLGVALNYLIPQSVFLLIASIATFATVWVWLMILLAQVGMRRR--M 389
Cdd:PRK10836 323 LYTLACDGKAPRIFAKLSRGGVPRNALYATTVIAGLCFLTSMFGNQTVYLWLLNTSGMTGFIAWLGIAISHYRFRRGyvL 402

                        410       420
                 ....*....|....*....|....*....
gi 489192412 390 GPRQVAALKFPVPLWPFAPAAAIVFMLFI 418
Cdd:PRK10836 403 QGHDLNDLPYRSGFFPLGPIFAFVLCLII 431
2A0310 TIGR00913
amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]
 8-424 2.65e-72

amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273334  Cd Length: 478  Bit Score: 236.03  E-value: 2.65e-72
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412    8 RRGLNARHIRFMALGSAIGTGLFYGSASAIQMAGPA-VLLAYLIAGAAVYMVMRALGEMAVHEPV-SGSFGHYASSYLGP 85
Cdd:TIGR00913   1 KKSLKQRHIQMIALGGTIGTGLLVGSGTALATGGPAgLLIGYAIMGSIIYCVMQSLGEMATFYPVvSGSFATYASRFVDP 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412   86 LAGFVTGWTYAFEMIIVCLADVTAFGIYMGFWFPDVPRWIWVLSIVLFIGGLNLCHVKVFGELEFWLSLVKVGAIVAMIL 165
Cdd:TIGR00913  81 AFGFAVGWNYWLQWLIVLPLELVTASMTIQYWTDKVNPAVWIAIFYVFIVIINLFGVKGYGEAEFWFSSIKILAIIGFII 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412  166 AGLgIMFFGfslGGAATSATGVHnLWQHGGFLPNGWA-----GLVASLSVVVFAFGGIEIIGITAGEAQDPQRVIPRAIN 240
Cdd:TIGR00913 161 LSI-ILNCG---GGPNHGYIGFR-YWHDPGAFAGGTIggrfkGVCSVFVTAAFSFGGTELVALTAGEAANPRKSIPRAAK 235

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412  241 AVPLRILLFYVLTLFVLMAIFPWQ---------QIGSNGSPFVQIFDGLGIESAAAILNVVVITAAISAINSDIFGAGRM 311
Cdd:TIGR00913 236 RTFWRILVFYILTLFLIGFLVPYNdprllssssSSDSAASPFVIAIQNHGIKVLPHIFNAVILISVLSAANSSLYASSRT 315

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412  312 LYGMARQGQAPVGFSRVSRHGVPWMTVLLMAVALLLGVALNYLIPQSVFLLIASIATFATVWVWLMILLAQVGMRRRMGP 391
Cdd:TIGR00913 316 LYALAHQGLAPKIFAYVDRRGVPYVAVIVSSLFGLLAFLAVSKKEAEVFTWLLNISGLSGFFTWMCICLSHIRFRKAMKA 395

                         410       420       430
                  ....*....|....*....|....*....|....*
gi 489192412  392 --RQVAALKFPVPLWPFAPAAAIVFMLFIFVVLGY 424
Cdd:TIGR00913 396 qgRSLDELPYKSQTGPYGSYYALFFNILILIAQGY 430
PRK10197 PRK10197
GABA permease;
19-426 2.09e-68

GABA permease;


Pssm-ID: 182297  Cd Length: 446  Bit Score: 224.89  E-value: 2.09e-68
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412  19 MALGSAIGTGLFYGSASAIQMAGPAVLLAYLIAGAAVYMVMRALGEMAVHEPVSGSFGHYASSYLGPLAGFVTGWTYAFE 98
Cdd:PRK10197   2 LSIAGVIGASLFVGSSVAIAEAGPAVLLAYLFAGLLVVMIMRMLAEMAVATPDTGSFSTYADKAIGRWAGYTIGWLYWWF 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412  99 MIIVCLADVTAFGIYMGFWFPDVPRWIWVLSIVLFIGGLNLCHVKVFGELEFWLSLVKVGAIVAMILAGlGIMFFGFSlg 178
Cdd:PRK10197  82 WVLVIPLEANIAAMILHSWVPGIPIWLFSLVITLALTGSNLLSVKNYGEFEFWLALCKVIAILAFIFLG-AVAISGFY-- 158

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412 179 gAATSATGVHNLWQHGGFLPNGWAGLVASLSVVVFAFGGIEIIGITAGEAQDPQRVIPRAINAVPLRILLFYVLTLFVLM 258
Cdd:PRK10197 159 -PYAEVSGISRLWDSGGFMPNGFGAVLSAMLITMFSFMGAEIVTIAAAESDTPEKHIVRATNSVIWRISIFYLCSIFVVV 237

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412 259 AIFPWQQIGSNG-SPFVQIFDGLGIESAAAILNVVVITAAISAINSDIFGAGRMLYGMARQGQAPVGFSRVSRHGVPWMT 337
Cdd:PRK10197 238 ALIPWNMPGLKAvGSYRSVLELLNIPHAKLIMDCVILLSVTSCLNSALYTASRMLYSLSRRGDAPAVMGKINRSKTPYVA 317

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412 338 VLLMAVALLLGVALNYLIPQSVFLLIASIATFATVWVWLMILLAQVGMRRRMGPrQVAALKFPVPLWPFAPAAAIVFMLF 417
Cdd:PRK10197 318 VLLSTGAAFLTVVVNYYAPAKVFKFLIDSSGAIALLVYLVIAVSQLRMRKILRA-EGSEIRLRMWLYPWLTWLVIGFITF 396


                 ....*....
gi 489192412 418 IFVVLGYFP 426
Cdd:PRK10197 397 VLVVMLFRP 405
PotE COG0531
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
2-457 1.52e-53

Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];


Pssm-ID: 440297 [Multi-domain]  Cd Length: 438  Bit Score: 185.49  E-value: 1.52e-53
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412   2 THDTGLRRGLNARHIRFMALGSAIGTGLFYGSASAIQMAGPAVLLAYLIAGAAVYMVMRALGEMAVHEPVSGSFGHYASS 81
Cdd:COG0531    4 GESSELKRKLGLFDLVALGVGAIIGAGIFVLPGLAAGLAGPAAILAWLIAGLLALLVALSYAELASAFPRAGGAYTYARR 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412  82 YLGPLAGFVTGWTYAFEMIIVCLADVTAFGIYMGFWFPDVPRWIWVLSIVLFIGGLNLCHVKVFGELEFWLSLVKVGAIV 161
Cdd:COG0531   84 ALGPLLGFLAGWALLLSYVLAVAAVAVAFGGYLSSLFPAGGSVLIALVLILLLTLLNLRGVKESAKVNNILTVLKLLVLL 163

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412 162 AMILAGLgimffgfslggaatsATGVHNLWQHGGFLPNGWAGLVASLSVVVFAFGGIEIIGITAGEAQDPQRVIPRAINA 241
Cdd:COG0531  164 LFIVVGL---------------FAFDPANFTPFLPAGGGLSGVLAALALAFFAFTGFEAIANLAEEAKNPKRNIPRAIIL 228

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412 242 VPLRILLFYVLTLFVLMAIFPWQQIGSNGSPFVQIFDGLGIESAAAILNVVVITAAISAINSDIFGAGRMLYGMARQGQA 321
Cdd:COG0531  229 SLLIVGVLYILVSLALTGVVPYDELAASGAPLADAAEAVFGPWGAILIALGALLSLLGALNASILGASRLLYAMARDGLL 308

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412 322 PVGFSRVS-RHGVPWMTVLLMAVALLLGValnyLIPQSVFLLIASIATFATVWVWLMILLAQVGMRRRmGPRQVAALKFP 400
Cdd:COG0531  309 PKVFAKVHpRFGTPVNAILLTGVIALLLL----LLGAASFTALASLASVGVLLAYLLVALAVIVLRRR-RPDLPRPFRVP 383

                        410       420       430       440       450
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 489192412 401 VPLWPFAPAAAIVFMLFIFVVLgyfpdtrpALWVGAIWIALLVIAYRRWVRPKGDAA 457
Cdd:COG0531  384 LPLIPILGILLCLFLLYLLGPG--------ALLIGLVLLAIGLLLYLLYRRRHPKLL 432
AA_permease_2 pfam13520
Amino acid permease;
18-442 3.92e-24

Amino acid permease;


Pssm-ID: 404414 [Multi-domain]  Cd Length: 427  Bit Score: 104.31  E-value: 3.92e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412   18 FMALGSAIGTGLFYGSASAiqMAGPAVLLAYLIA-GAAVYMVMRALGEMAVHEPVSGSFGHYASSYLGPLAGFVTGWTYA 96
Cdd:pfam13520   8 ALVIGSVIGSGIFVAPLVA--SGGPALIVWGWIAaIIFSLAVGLVYAELSSALPRSGGIYVYLENAFGKFVAFLAGWSNW 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412   97 FE-MIIVCLADVTAFGIYMGFWFPDVPRWIWVL-----SIVLFIGGLNLCHVKVFGELEFWLSLVKVGAIVA-MILAGLG 169
Cdd:pfam13520  86 FAyVLGLASSASVAASYLLSALGPDLVPTTWLTygiaiAILIIFAIINIRGVRESAKIQNILGILKLLLPLIlIIILGLV 165

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412  170 IMFFGFSLGgaatsatgvhNLWQHGGFLPNGWAGLVASLSVVVFAFGGIEIIGITAGEAqdPQRVIPRAINAVPLRILLF 249
Cdd:pfam13520 166 TADGGGFNL----------LSGEWHTFFPDGWPGVFAGFLGVLWSFTGFESAANVSEEV--KKRNVPKAIFIGVIIVGVL 233

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412  250 YVLTLFVLMAIFPWQQIGSN---GSPFVQIFDGLGIESAAAILNVVVITAAISAINSDIFGAGRMLYGMARQGQAPVG-- 324
Cdd:pfam13520 234 YILVNIAFFGVVPDDEIALSsglGQVAALLFQAVGGKWGAIIVVILLALSLLGAVNTAIVGASRLLYALARDGVLPFSrf 313

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412  325 FSRVSRHGVPWMTVLLMAVALLLGVALNYLIPqSVFLLIASIATFATVWVWLMILLAQVGMRRRmgpRQVAALKFPVPLW 404
Cdd:pfam13520 314 FAKVNKFGSPIRAIILTAILSLILLLLFLLSP-AAYNALLSLSAYGYLLSYLLPIIGLLILRKK---RPDLGRIPGRWPV 389

                         410       420       430
                  ....*....|....*....|....*....|....*...
gi 489192412  405 PFAPAAAIVFMLFIFVVLGYFPDTRPALWVGAIWIALL 442
Cdd:pfam13520 390 AIFGILFSLFLIVALFFPPVGPATGSSLNYAIILIVAF 427
2A0303 TIGR00906
cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides ...
 4-385 1.71e-19

cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273330 [Multi-domain]  Cd Length: 557  Bit Score: 91.03  E-value: 1.71e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412    4 DTGLRRGLNARHIRFMALGSAIGTGLFYGSAS-AIQMAGPAVLLAYLIAGAAVYMVMRALGEMAVHEPVSGSFGHYASSY 82
Cdd:TIGR00906  23 ESKMKRCLTTWDLMALGIGSTIGAGIYVLTGEvARNDSGPAIVLSFLISGLAAVLSGFCYAEFGARVPKAGSAYLYSYVT 102

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412   83 LGPLAGFVTGWTYAFEMIIVCLADVTAFGIY--------MGFWFPDV-----PRWIWVLSIVLFIGGLNLCHVKVFGELE 149
Cdd:TIGR00906 103 VGELWAFITGWNLILEYVIGTAAVARSWSAYfdellnkqIGQFRRTYfklnyDGLAEYPDFFAVCLILLLAVLLSFGVKE 182

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412  150 FwlSLVKVGAIVAMILAGLGIMFFGFSLGGAATSATGVHNlwQHGGFLPNGWAGLVASLSVVVFAFGGIEIIGITAGEAQ 229
Cdd:TIGR00906 183 S--AWVNKIFTAINILVLLFVIIAGFTKADVANWSITEEK--GAGGFMPYGFTGVLSGAATCFFAFIGFDAIATTGEEVK 258

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412  230 DPQRVIPRAINAVPLRILLFYVLTLFVLMAIFPWQQIGSNgSPFVQIFDGLGIESAAAILNVVVITAAISAINSDIFGAG 309
Cdd:TIGR00906 259 NPQRAIPIGIVTSLLVCFVAYFLMSAALTLMMPYYLLDPD-APFPVAFEYVGWDPAKYIVAVGALCGMSTSLLGGMFPLP 337

                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 489192412  310 RMLYGMARQGQAPVGFSRV-SRHGVPWMTVLLMAVALLLGVALNYLIPQSVFLLIASIATFATVWVWLMILLAQVGM 385
Cdd:TIGR00906 338 RVIYAMARDGLLFKWLAQInSKTKTPINATVVSGAIAALMAFLFDLKALVDLLSIGTLLAYSLVAACVLILRYQPGL 414
2A0308 TIGR00911
L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and ...
 22-427 7.39e-12

L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273332 [Multi-domain]  Cd Length: 501  Bit Score: 67.08  E-value: 7.39e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412   22 GSAIGTGLFYGSASAIQMAGP--------AVLLAYLIAGAAVYMvmralgEMAVHEPVSGSFGHYASSYLGPLAGFVTGW 93
Cdd:TIGR00911  55 GTIIGSGIFVSPKGVLKNAGSvglalimwAVCGIFSIVGALVYA------ELGTTIPKSGGEYNYILEVFGPLLAFLRLW 128

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412   94 tYAFEMIIV--CLADVTAFGIY-MGFWFPDVPRWIWVLSIVLFIGGLNLCHVKVFGelefwlslVKVGAIVAMILAG--L 168
Cdd:TIGR00911 129 -IELLVIRPgsQAVNALNFAIYiLTPVFPDCEVPEWAIRLVAVLCVLLLTLVNCLS--------VKWATRVQDIFTAckL 199

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412  169 GIMFFGFSLGGAATSATGVHNLWQHGGF--LPNGWAGLVASLSVVVFAFGGIEIIGITAGEAQDPQRVIPRAINAVPLRI 246
Cdd:TIGR00911 200 LALLLIIITGWVQLGKGGVESLNPKNAFegTETSAGGIVLAFYSGIWAYGGWNYLNFVTEEVKNPYRTLPIAIIISMPIV 279

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412  247 LLFYVLTLFVLMAIFPWQQIGSNGSPFVQIFDGLgIESAAAILNVVVITAAISAINSDIFGAGRMLYGMARQGQAPVGFS 326
Cdd:TIGR00911 280 TFIYVLTNIAYFTVLSPEELLASLAVAVDFGERL-LGVMSWAMPALVGLSCFGSVNGSLFSSSRLFFVGGREGHLPSLLS 358

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412  327 RVSRHGVPWMTVLLMAVAlllgVALNYLIPQSVFLLIASIATFatvwVWLMILLAQVGMR--RRMGPRQVAALKFPVplw 404
Cdd:TIGR00911 359 MIHVKRLTPLPSLLIVCT----LTLLMLFSGDIYSLINLISFA----NWLFNALAVAGLLwlRYKRPEMNRPIKVPL--- 427

                         410       420
                  ....*....|....*....|...
gi 489192412  405 pFAPAAAIVFMLFIfVVLGYFPD 427
Cdd:TIGR00911 428 -FFPVFFLLSCLFL-IILSLYSP 448
frlA PRK11357
amino acid permease;
6-319 3.09e-11

amino acid permease;


Pssm-ID: 183096 [Multi-domain]  Cd Length: 445  Bit Score: 65.26  E-value: 3.09e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412   6 GLRRGLNARHIRFMALGSAIGTGLFYGSASAIQMAGPAVL--LAYLIAGAAVYMVMRALGEMAVHEPVSGSFGHYASSYL 83
Cdd:PRK11357   5 ELQRKLGFWAVLAIAVGTTVGSGIFVSVGEVAKAAGTPWLtvLAFVIGGLIVIPQMCVYAELSTAYPENGADYVYLKNAG 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412  84 GPLAGFVTGW-----TYAFEMIIVCLADVTAFGIYMGfWFPDVPRWIWVLSIVLFIGgLNLCHVKVFGELEFWLSLVKVg 158
Cdd:PRK11357  85 SRPLAFLSGWasfwaNDAPSLSIMALAIVSNLGFLTP-IDPLLGKFIAAGLIIAFML-LHLRSVEGGAAFQTLITIAKI- 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412 159 aIVAMILAGLGIMFF-GFSLGGAATSATGVHnlwqhGGFLpngwaGLVASLSVVVFAFGGIEIIGITAGEAQDPQRVIPR 237
Cdd:PRK11357 162 -IPFTIVIGLGIFWFkAENFAAPTTTAIGAT-----GSFM-----ALLAGISATSWSYTGMASICYMTGEIKNPGKTMPR 230

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412 238 AINAVPLRILLFYVLTLFVLMAIFPWQQIGSNGSPFVQIFD---GLGIESA--AAILNVVVITAAISainSDIFGAGRML 312
Cdd:PRK11357 231 ALIGSCLLVLVLYTLLALVISGLMPFDKLANSETPISDALTwipALGSTAGifVAITAMIVILGSLS---SCVMYQPRLE 307


                 ....*..
gi 489192412 313 YGMARQG 319
Cdd:PRK11357 308 YAMAKDN 314
PRK11021 PRK11021
putative transporter; Provisional
 23-334 7.50e-10

putative transporter; Provisional


Pssm-ID: 236823 [Multi-domain]  Cd Length: 410  Bit Score: 60.69  E-value: 7.50e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412  23 SAIGTGLFYGSASAIQMAGPAVLLAYLIAGAAVYMVMRALGEMAVHEPVSGSFGHYASSYLGPLAGFVTGWTYafeMIIV 102
Cdd:PRK11021  13 SLLGTGVFAVPALAALVAGNNSLWAWPLLILLIFPIAIVFARLGRHFPHAGGPAHFVGMAFGPRLGRVTGWLF---LSVI 89

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412 103 CLADVTAFGIYMGFW-----FPDVPRWIWVLSIVLFIGGLNLCHVKVFGELEFWLSLVKVGAIVAMILAGlgimffGFSL 177
Cdd:PRK11021  90 PVGLPAALQIAAGFGqalfgWSSWQLLLAELLTLALLWLLNLRGASSSANLQTVIALLIVALVVAIWWAG------DIKP 163

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412 178 GGAATSATGVHNLWQhggflpngwagLVASLSVVVFAFGGIEIIGITAGEAQDPQRVIPRAINAVPLRILLFYVLTLFVL 257
Cdd:PRK11021 164 ADIPFPAPGSIEWSG-----------LFAALGVMFWCFVGIEAFAHLASEFKNPERDFPRALMIGLLLAGLVYWACTVVV 232

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 489192412 258 MAIFPWQQIGSNGSPFVQIFDGLGIESAAAILNVVVITAAISAINSDIFGAGRMLYGMARQGQAPVGFSRVSRHGVP 334
Cdd:PRK11021 233 LHFPAYGDKQAAAASLPGIFVQLFGGYALWVICVIGYLACFASVNIYTQSFARLVWSQAREGRPPSYLARLSARGVP 309
PRK10644 PRK10644
arginine/agmatine antiporter;
18-334 4.31e-08

arginine/agmatine antiporter;


Pssm-ID: 182613 [Multi-domain]  Cd Length: 445  Bit Score: 55.18  E-value: 4.31e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412  18 FMALGSAIGTGLFYGSASAIQMAGPAVLlAYLIAGAAVYMVMRALGEMAVHEPVSGSFGHYASSYLGPLAGFVTGWTYAF 97
Cdd:PRK10644  17 LMVAGNIMGSGVFLLPANLASTGGIAIY-GWLVTIIGALGLSMVYAKMSSLDPSPGGSYAYARRCFGPFLGYQTNVLYWL 95

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412  98 EMIIVCLADVTAFGIYMGFWFP----DVPRWIWVLSIVLFIGGLNLCHVKVFGELEfwlslvKVGAIVAMILAgLGIMFF 173
Cdd:PRK10644  96 ACWIGNIAMVVIGVGYLSYFFPilkdPLVLTITCVVVLWIFVLLNIVGPKMITRVQ------AVATVLALIPI-VGIAVF 168

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412 174 GFSLGGAATSATGvhnlWQHGGFlpNGWAGLVASLSVVVFAFGGIEIIGITAGEAQDPQRVIPRAINAVPLRILLFYVLT 253
Cdd:PRK10644 169 GWFWFRGETYMAA----WNVSGL--GTFGAIQSTLNVTLWSFIGVESASVAAGVVKNPKRNVPIATIGGVLIAAVCYVLS 242

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412 254 LFVLMAIFPWQQIGSNGSPFVqifDGLGIESAAAILNVVVITAAISAINSD---IFGAGRMLYGMARQGQAPVGFSRVSR 330
Cdd:PRK10644 243 STAIMGMIPNAALRVSASPFG---DAARMALGDTAGAIVSFCAAAGCLGSLggwTLLAGQTAKAAADDGLFPPIFARVNK 319


                 ....
gi 489192412 331 HGVP 334
Cdd:PRK10644 320 AGTP 323
GerAB COG5902
Spore germination receptor GerABC, GerB subunit (amino acid transporter) [Cell cycle control, ...
 11-277 9.42e-06

Spore germination receptor GerABC, GerB subunit (amino acid transporter) [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 444604  Cd Length: 365  Bit Score: 47.50  E-value: 9.42e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412  11 LNARHIRFMALGSAIGTGLFYGSASAIQMAGPAVLLAYLIAGAAVYMVMRALGEMAVHEPvSGSFGHYASSYLGPLAGFV 90
Cdd:COG5902    6 ISARQLFFLIILTIIGVGILTLPRLLAKIAGQDAWISVLLAGLIGLLLALIIVKLLKRFP-GKTLVEISEKILGKWLGKL 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412  91 TGWTYAFEMIIVCLADVTAFGIYMGFW-FPDVPrwIWVLSIVLFIGGLNLchvkVFGELEfwlSLVKVGAIVAMILAGLG 169
Cdd:COG5902   85 LGLLYILYFLLIAALVLREFGEFIKTTlLPETP--IWVIILLFLLVAVYA----VRGGIE---VIARVAEILFPLILILL 155

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412 170 IMFFGFSLggaatsatgvhNLWQHGGFLP---NGWAGLVASLSVVVFAFGGIEIIGITAGEAQDPQRVIPRAINAVPLrI 246
Cdd:COG5902  156 LLLLLLSL-----------PEIDFSNLLPvleNGLKPILKGALPTSFPFGGFEILLMLYPYVKKKKKAKKAALIGILI-S 223

                        250       260       270
                 ....*....|....*....|....*....|.
gi 489192412 247 LLFYVLTLFVLMAIFPWQQIGSNGSPFVQIF 277
Cdd:COG5902  224 GLLLTLVVLVSIGVFGPEETSRLTFPTLELA 254
2A0304 TIGR00907
amino acid permease (GABA permease); [Transport and binding proteins, Amino acids, peptides ...
 42-430 1.02e-04

amino acid permease (GABA permease); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273331 [Multi-domain]  Cd Length: 482  Bit Score: 44.74  E-value: 1.02e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412   42 PAVLLAYLIAGAAVYMVMRALGEMAVHEPVSGSFGHYASSYLG----PLAGFVTGW-TYAFEMIIVCLADVTAFGIYMGF 116
Cdd:TIGR00907  47 MSIVWGWIIAGAGSICIALSLAELSSAYPTSGGQYFWSAKLAPprqmPFASWMTGWfNLAGQVAGTASTDLSVAQLILGI 126

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412  117 WFPDVPRWIWVLS---IVLFIGGLNLCHVKVFGELEFWLSLVKVGAIVAMILAGLGIMFFGFSLG-GAATSATGVHNLWQ 192
Cdd:TIGR00907 127 VSLTTPGREYIPTrwhIFGIMIGIHLIHALINSLPTKWLPRITSSAAYWSLLGFLTICITLLACKsPKFNDGKFVFTNFN 206

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412  193 H--GGFLPNGWAGLVASLSVVvFAFGGIEIIGITAGEAQDPQRVIPRAI-NAVPLRIL--LFYVLTLFVLMAIFPWQQIG 267
Cdd:TIGR00907 207 NstGGWKPGGFAFLLGLLNPA-WSMTGYDGTAHMAEEIENPEVVGPRAIiGAVAIGIVtgFCFNIVLFFSMGDIDSLISS 285

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412  268 SNGSPFVQIF-DGLGIESAAAILNVVVITAAISAINSDIFGAGRMLYGMARQGQAPVG--FSRVSRH-GVP----WMTVL 339
Cdd:TIGR00907 286 TTGQPIAQIFyNALGNKAGAIFLLCLILVTSFFCAITCMTANSRMIYAFSRDGGLPFSplWSRVNPRtQVPlnavWLSAV 365

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412  340 LMAValllgVALNYLIPQSVFLLIASIATFATVWVWLM-ILLAQVGMRRRMGPRQVAALKFPVplwpFAPAAAIVFMLFI 418
Cdd:TIGR00907 366 WIIL-----IGLLGLGSSTAFQAIFSVCTVALDVSYVIpIICKLAKGRNTIAPGPFWLGKYGF----FVNAVAVAWTVFS 436

                         410
                  ....*....|..
gi 489192412  419 fVVLGYFPDTRP 430
Cdd:TIGR00907 437 -SVLFSFPPVLP 447
Spore_permease pfam03845
Spore germination protein;
11-261 4.94e-03

Spore germination protein;


Pssm-ID: 281794  Cd Length: 321  Bit Score: 38.77  E-value: 4.94e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412   11 LNARHIRFMALGSAIGTGLFYGSASAIQMAGP----AVLLAYLIAGAAVYMVMRALGEMAvhepvSGSFGHYASSYLGPL 86
Cdd:pfam03845   2 ISTKQTFFLIVSFQLGSGILTLPRSVAEQAGPdgwiSVLLAGIIGLILVYLYYYLLKKFP-----EKTLIEYMKKILGKW 76

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412   87 AGFVTGWTYAFEMIIVCLADVTAFGIYMGFW-FPDVPRWIWVLSIVLfigglnLCHVKVFGELEfwlSLVKVGAIVAMIL 165
Cdd:pfam03845  77 LGSLLSILFMLYFLYIAGRVLRIFSEVIQFFlLPDTPTWIIILTLLL------VSLYLISKGIE---VLAREFCFIIPIL 147

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489192412  166 AGLGIMFFGFSLGGAAtsatgVHNLWQhggFLPNGWAGLVASLSVVVFAFGGIEIIGITAGEAQDPQRVIPRAINAVPLR 245
Cdd:pfam03845 148 LIILLLILLFSLKIAH-----IDNLRP---VLGNGISPVLKGLKVTSLPFGGFEILLMLYPFMKDKKKSKKAALLGVGIS 219

                         250
                  ....*....|....*.
gi 489192412  246 IlLFYVLTLFVLMAIF 261
Cdd:pfam03845 220 G-LLYTLTTIIVIGVL 234
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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