|
Name |
Accession |
Description |
Interval |
E-value |
| FecA |
COG4772 |
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism]; |
108-784 |
0e+00 |
|
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism];
Pssm-ID: 443804 [Multi-domain] Cd Length: 681 Bit Score: 633.50 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 108 AYTLEALPVEDPANLQALTVVGDWLADAsaaDVFEHPGARDVVRREQFQAQGAASTREVLERIPGVSAPLNNGTGshdLA 187
Cdd:COG4772 9 LLLAAAAAAEAATTLETVVVTGSRAAEA---RLKDVPGSVSVVDREELENQAATSLREVLRRVPGVNVQEEDGFG---LR 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 188 LNFGIRGLNPRLASRSTVLMDGIPVPFAPYGQPQLSLAPvSIGNMDAVDVVRGGGAVRYGPQNVGGIVNFVTRAIPEDFA 267
Cdd:COG4772 83 PNIGIRGLGPRRSRGITLLEDGIPIAPAPYGDPAAYYFP-DLERMERIEVLRGAAALRYGPQTVGGAINFVTRTIPTAFG 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 268 TKLDVhselspSSSQDGLKTTHNVLigGTGANGLGGALLYSGTRGGDWREHSDTRIDDLILKGRFQPSDEHTFSAMTQYY 347
Cdd:COG4772 162 GELRV------TGGSFGYRRTHASV--GGTVGNFGYLVEYSRKRGDGFRDNSGFDINDFNAKLGYRLSDRQELTLKFQYY 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 348 DGEADMPGGLGTAAYHDDPYQSTRPYDKFWGRRTLASASYEYTPNASQKLNVTGFFTKTLRSGYLDQ--------GRNLT 419
Cdd:COG4772 234 DEDANTPGGLTDAQFDADPRQSYRPADQFDTRRTQLSLRYEHQLSDNTTLTTTAYYNDFSRNWYIRQntadpntpGLGLR 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 420 LSPREYWVRGLETRFSQGFELGESRHEVGIGHRYVNEASHELRYWTRADSGQlpsTGSRNDRDTRGSTEANAFYIDDRID 499
Cdd:COG4772 314 GNPRGYRSYGIEPRLTHRFELGGVPHTLEVGLRYHREEEDRKQYVNTYGQGR---SGAGLRRDRRFSADALAAYAQNRFE 390
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 500 I-GNWTITPGIRYEKIDSEQKNLLK-----NSKDSGRYNASLPALNVIYHLTPSWNLYANTEGSFGTVQYSQMGKAVRS- 572
Cdd:COG4772 391 LtGRLTLTPGLRYEHIRRDRTDRYStrtggDDSGSNSYSEFLPGLGLLYQLTDNLQLYANVSRGFEPPTFGDLAYGNGGn 470
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 573 GDIEPEKARTWELGSRYD-DGILRAELGAFLINFDNQYESNQ----QTDSVTARGKTRHKGIEAAIAYDLAdlDPLLSGF 647
Cdd:COG4772 471 PDLKPEKSWNYELGTRGRiGNGLSAEVALFYIDYDNELGSCSaaggDRSTFTNAGETRHQGLELALDYDLL--KGGGLGL 548
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 648 DVYASYAYVDASIRE--DGPNKGNQVPFSSKHKGTLGANYRTGAWSYNLDGSFQTSQYADNANTEsesADGSTGRIAGWM 725
Cdd:COG4772 549 PLFAAYTYTDAEFTSdfGPVFAGNRLPYVPRHQLTAGLGYEHGGWTANLNGRYVSEQFTDAANTV---ADGSFGKIPSYT 625
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|....*....
gi 489204697 726 VWSARGTYDFGPqlnDLKLGLGVKNLFDRRYYTRSFDDNNKGLYVGQPRTLYVQASVGF 784
Cdd:COG4772 626 VLDLSASYDFGK---NLSLFAGVNNLFDKRYIASRAPNYAAGIRPGPPRTVYAGLRLKF 681
|
|
| TonB-siderophor |
TIGR01783 |
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of ... |
142-784 |
3.60e-129 |
|
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of TonB-dependent outer membrane siderophore receptors. It has no overlap with TonB receptors known to transport other substances, but is likely incomplete due to lack of characterizations. It is likely that genuine siderophore receptors will be identified which score below the noise cutoff to this model at which point the model should be updated. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273805 [Multi-domain] Cd Length: 651 Bit Score: 399.48 E-value: 3.60e-129
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 142 EHPGARDVVRREQFQAQGAASTREVLERIPGVSAPLNNGTGSHDlalNFGIRGLNPRlASRSTVLMDGIPVPFAPygqpq 221
Cdd:TIGR01783 1 DIPQSVSVITRQELEDQQAGSLSEALQRVPGVVVGGSGGTTQFG---NITIRGFGLE-VDIDNVYLDGVPLLSRG----- 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 222 lSLAPVSIGNMDAVDVVRGGGAVRYGPQNVGGIVNFVTRAIPEDFATKLDVHSelsPSSSQDGLKTTHNVLIGGTGANGL 301
Cdd:TIGR01783 72 -NLAIVDPAMVERVEVLRGPASLLYGGSAPGGVINIVTKRPQDEPKGSVTFGA---GTRSGYRTAFDLGGPLGADGTFRG 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 302 ggALLYSGTRGGDWREHSDTRIDDLILKGRFQPsDEHTFSAMTQYYDGEADMPGGLGTAA--------YHDDPYQST--- 370
Cdd:TIGR01783 148 --RLNGARQDGDSFYDGAGEETRLGATATDWQL-DDRTLLRLGAYYQKERDRGGYGGLPAsggtsgrdLSSDRYLGTssn 224
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 371 RPYDKFWGRRTLASASYEYTPNASQKLNVTGFFTKTLR-----SGYLDQGRNLTLSPREYWVR----GLETRFSQGFELG 441
Cdd:TIGR01783 225 RNYDDREYLSYGLSLEYQFNDVWTGKQNLRYSYFDTDSnqvqaSGYSSDGGLFGRSLTVVNVKqdrvQIDAGLDGEFETG 304
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 442 ESRHEVGIGHRY----------VNEASHELRYWTRADSGQLPSTGSRNDRDTRGSTEA-NAFYIDDRIDIGNWTITPGIR 510
Cdd:TIGR01783 305 PIEHDLLLGVSYgqrttnrfnnTGYPSDNIYSLTATSSARTDIGDSPKDRALSSTTKAlNGVALQRILLADKWTLTLGGR 384
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 511 YEKIDSEQKNLLKNSKDSGRYNASLPALNVIYHLTPSWNLYANTEGSFGTVQYSQMGKAVRSGDIEPEKARTWELGSRYD 590
Cdd:TIGR01783 385 YDSVDVKSNNGVAGSTGKRDDSQFTPSLGVAYKPTDDWSLYASYAESFKPGGYYPKGAGNSGDILEPEKGKNYELGVRYD 464
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 591 DG-ILRAELGAFLINFDNQYESNQQTDSVTAR-GKTRHKGIEAAIAYDLADldpllsGFDVYASYAYVDASIREDGP--N 666
Cdd:TIGR01783 465 LGdSLLATAALFRITKDNQLVQDPVNGTFSVNaGKTRNRGVELEARGYLTP------GLSLSAGYTYTDAEFTEDTNgdT 538
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 667 KGNQVPFSSKHKGTLGANYRTGAWSYNLdGSFQTSQYADNANteseSADGSTGRIAGWMVWSARGTYDFGPQLNdLKLGL 746
Cdd:TIGR01783 539 QGNTVPFVPKHTASLWASYAPPVGDNGL-TLGGGVQYTGKAY----VDGGNTGKVPSYTVVDLSVRYDLTKKKN-LTLAL 612
|
650 660 670
....*....|....*....|....*....|....*....
gi 489204697 747 GVKNLFDRRYYTRSFD-DNNKGLYVGQPRTLYVQASVGF 784
Cdd:TIGR01783 613 NVNNLFDRDYYTSGYRwGPSAYIYPGAPRTVGLSVSYDF 651
|
|
| ligand_gated_channel |
cd01347 |
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ... |
148-784 |
2.03e-89 |
|
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.
Pssm-ID: 238657 [Multi-domain] Cd Length: 635 Bit Score: 294.74 E-value: 2.03e-89
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 148 DVVRREQFQAQGAASTREVLERIPGVSAPLNNGTGshdlALNFGIRGLNPrlaSRSTVLMDGIPVPFAPYGQpQLSLAPV 227
Cdd:cd01347 3 SVITAEDIEKQPATSLADLLRRIPGVSVTRGGGGG----GSTISIRGFGP---DRTLVLVDGLPLASSNYGR-GVDLNTI 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 228 SIGNMDAVDVVRGGGAVRYGPQNVGGIVNFVTRAIPEDFATKLDVHSELSPSSSQDGlkTTHNVLIGGTGANGLGGALLY 307
Cdd:cd01347 75 PPELIERVEVLKGPSSALYGSGAIGGVVNIITKRPTDEFGGSVTAGYGSDNSGSSGG--GGFDVSGALADDGAFGARLYG 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 308 SGTRGGDW------REHSDTRIDDLILKGRFQPSDEHTFSAMTQYYDGEADMPGGLGTAAYH--------DDPYQSTRPY 373
Cdd:cd01347 153 AYRDGDGTidgdgqADDSDEERYNVAGKLDWRPDDDTRLTLDAGYQDQDADGPGGTLPANGTgsslgggpSSNTNGDRDW 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 374 DKFWGRRTLASASYEYTPN---ASQKLNVT----------GFFTKTLRSGYLDQGRNLTLSPREYWVRGLETRFSQGFEL 440
Cdd:cd01347 233 DYRDRYRKRASLGLEHDLNdtgWTLRANLSysytdndgdpLILNGGNNAAGGDLGRSGYSSERDTTQLGFDAGLNAPFGT 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 441 GESRHEVGIGHRYVNEashelrywtradsgqlpstgsRNDRDTrgsteaNAFYIDDRIDIG-NWTITPGIRYEKIDSEQK 519
Cdd:cd01347 313 GPVAHTLTLGVEYRRE---------------------ELDEKQ------TALYAQDTIELTdDLTLTLGLRYDHYDQDSK 365
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 520 NLLK-NSKDSGRYNASLPALNVIYHLTPSWNLYANTEGSFGTVQYSQM--------GKAVRSGDIEPEKARTWELGSRYD 590
Cdd:cd01347 366 DTIAgGTTAKKSYSHWSPSLGLVYKLTDGLSLYASYSQGFRAPSLGELygggshggTAAVGNPNLKPEKSKQYELGLKYD 445
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 591 -DGILRAELGAFLINFDNQYESNQQTDSV------TARGKTRHKGIEAAIAYDLADldpllsGFDVYASYAYVDASIRE- 662
Cdd:cd01347 446 pGDGLTLSAALFRIDIKNEIVSTPTNTGLglvtvyVNGGKARIRGVELEASYDLTD------GLGLTGSYTYTDTEVKRt 519
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 663 DGPNKGNQVPFSSKHKGTLGANYRTGA--WSYNLDGSFQTSQYADNANTesesadGSTGRIAGWMVWSARGTYDFGPqln 740
Cdd:cd01347 520 DGATTGNRLPGIPKHTANLGLDYELPDegLTAGGGVRYRGKQYADTANG------NNTVKVPGYTLVDLSASYQFTK--- 590
|
650 660 670 680
....*....|....*....|....*....|....*....|....*
gi 489204697 741 DLKLGLGVKNLFDRRYYTR-SFDDNNKGLYVGQPRTLYVQASVGF 784
Cdd:cd01347 591 NLTLRLGVNNLFDKDYYTSlSVRGSGLYGYYGPGRTYYLSVSYKF 635
|
|
| TonB_dep_Rec |
pfam00593 |
TonB dependent receptor; This model now only covers the conserved part of the barrel structure. |
314-782 |
6.38e-48 |
|
TonB dependent receptor; This model now only covers the conserved part of the barrel structure.
Pssm-ID: 395474 [Multi-domain] Cd Length: 475 Bit Score: 176.88 E-value: 6.38e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 314 DWREHSDTRIDDLILKGRFQPSDEHTfsamtQYYDGEADMPGGLGTAAYHDDPYQSTRPYDKFWGRRTLASASYEYTPNA 393
Cdd:pfam00593 1 GWQLSLDLLGDDTLLTLGYDYSRYTD-----GLDLGLTLDGYGNDGGYLGDRPLYYGRDYSDTDRKRLSLGYDYDLGDGL 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 394 S--QKLNVTGFFTK-----TLRSGYLDQGRNLTLSPREYWVRGLETRFSQGFELgesRHEVGIGHRYVNEAShELRYWTR 466
Cdd:pfam00593 76 SwlSTLRLGLRYSSldgdyTSNSSGLSGAGDYLSDDRLYGLYGLDGDLELSLDL---SHDLLLGVELRTAGL-DYRRLDD 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 467 ADSGQLPSTGSRNDRDTRGSTEANAFYIDDRIDI-GNWTITPGIRYEKIDSEQKNLLKNSKDSGR-YNASLPALNVIYHL 544
Cdd:pfam00593 152 DAYDPYDPANPSSSSYSDTTTDSYGLYLQDNIKLtDRLTLTLGLRYDHYSTDGDDGNGGGDNFSRsYSAFSPRLGLVYKP 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 545 TPSWNLYAN----------TEGSFGTVQYSQMGKAVRSGDIEPEKARTWELGSRYDDGILRAELGAFLINFDNQYESNQQ 614
Cdd:pfam00593 232 TDNLSLYASysrgfrapslGELYGSGSGGGGGAVAGGNPDLKPETSDNYELGLKYDDGRLSLSLALFYIDIKNLITSDPD 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 615 TDSVTAR-------GKTRHKGIEAAIAYDladldpLLSGFDVYASYAYVDASIREDGPNKGNQVPFSSKHKGTLGANYR- 686
Cdd:pfam00593 312 GPGLGGTvytytnvGKARIRGVELELSGR------LWGLGLSGGGYTYTDADDDADADDTGNPLPNVPRHTANLGLTYDf 385
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 687 -TGAWSYNLDGSFQTSQYADNANtesesaDGSTGRIAGWMVWSARGTYDFGpqlNDLKLGLGVKNLFDRRY-YTRSFDDN 764
Cdd:pfam00593 386 pLGGWGARLGARYVGSGERRYGD------AANTFKTPGYTLVDLSAGYRLN---KNLTLRLGVNNLFDKYYkRYYSSGGG 456
|
490
....*....|....*...
gi 489204697 765 NKGLYVGQPRTLYVQASV 782
Cdd:pfam00593 457 NLGGYPGPGRTFYLGLSY 474
|
|
| PRK13486 |
PRK13486 |
TonB-dependent receptor; |
149-756 |
1.47e-14 |
|
TonB-dependent receptor;
Pssm-ID: 139606 [Multi-domain] Cd Length: 696 Bit Score: 77.75 E-value: 1.47e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 149 VVRREQFQAQGAASTREVLERIPGVSapLNNGTGSHDlALNFGIRGLNprlASRSTVLMDGI----PVPFAPYGQPQLS- 223
Cdd:PRK13486 48 VISQEELQSSQYHDLAEALRSVEGVD--VESGTGKTG-GLEISIRGMP---ASYTLILIDGVrqggSSDVTPNGFSAMNt 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 224 --LAPVSIgnMDAVDVVRGGGAVRYGPQNVGGIVNFVTRAIPEDFATKLDVHSELSPS-----SSQDGLKTTHNVLIGGT 296
Cdd:PRK13486 122 gfMPPLAA--IERIEVIRGPMSTLYGSDAMGGVVNIITRKNADKWLSSVNAGLNLQESnkwgnSSQFNFWSSGPLVDDSV 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 297 GANGLGGALLYSGTRGGDWREHSDTRI------DDLILKGRF--QPSDEHTF----SAMTQYYDGEADMPGGLGTAayhd 364
Cdd:PRK13486 200 SLQVRGSTQQRQGSSVTSLSDTAATRIpyptesQNYNLGARLdwKASEQDVLwfdmDTTRQRYDNRDGQLGSLTGG---- 275
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 365 dpYQSTRPYDkfwgrRTLASASYEYTpnasqklnvtgfFTKTLRSGYLD------QGRNLT---LSPREYWVRGLETRFS 435
Cdd:PRK13486 276 --YDRTLRYE-----RNKISAGYDHT------------FTFGTWKSYLNwnetenKGRELVrsvLKRDKWGLAGQPRELK 336
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 436 QG---------FELGESrHEVGIGHRYVNEashelrywTRADSGQLPSTGSRNDRDTRGSTEANAFYIDDRIdignwTIT 506
Cdd:PRK13486 337 ESnlilnslllTPLGES-HLVTVGGEFQSS--------SMKDGVVLASTGETFRQKSWSVFAEDEWHLTDAL-----ALT 402
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 507 PGIRYEKidseqknllkNSKDSGRYNaslPALNVIYHLTPSWNLYANTEGSFGTVQYSQMGKAVR--SG----------D 574
Cdd:PRK13486 403 AGSRYEH----------HEQFGGHFS---PRAYLVWDVADAWTLKGGVTTGYKAPRMGQLHKGISgvSGqgktnllgnpD 469
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 575 IEPEKARTWELGSRYDDGI-LRAELGAFLINFDNQ---YESNQQTDSVTARGKTRHKGIEAAIAYDLADLDPLLSgfdvy 650
Cdd:PRK13486 470 LKPEESVSYEAGVYYDNPAgLNANVTGFMTDFSNKivsYSINDNTNSYVNSGKARLHGVEFAGTLPLWSEDVTLS----- 544
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 651 ASYAYVDASIReDGPNKGNQVPFSSKHKGTLGANYRT----GAW---SYNLDGSFQTSQYADNANTESESADGSTGRIAG 723
Cdd:PRK13486 545 LNYTWTRSEQR-DGDNKGAPLSYTPEHMVNAKLNWQIteevASWlgaRYRGKTPRFTQNYSSLSAVQKKVYDEKGEYLKA 623
|
650 660 670
....*....|....*....|....*....|...
gi 489204697 724 WMVWSARGTYDFgpqLNDLKLGLGVKNLFDRRY 756
Cdd:PRK13486 624 WTVVDAGLSWKM---TDALTLNAAVNNLLNKDY 653
|
|
| STN |
smart00965 |
Secretin and TonB N terminus short domain; This is a short domain found at the N-terminus of ... |
63-113 |
2.12e-10 |
|
Secretin and TonB N terminus short domain; This is a short domain found at the N-terminus of the Secretins of the bacterial type II/III secretory system as well as the TonB-dependent receptor proteins. These proteins are involved in TonB-dependent active uptake of selective substrates.
Pssm-ID: 198033 [Multi-domain] Cd Length: 52 Bit Score: 56.36 E-value: 2.12e-10
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 489204697 63 VLIAFSPEQTAARRSQALDGEYTLEEALAALLVGSGLEARARGDGAYTLEA 113
Cdd:smart00965 1 LNFVYDPALVAGRRVSLLLGNVTVEQALDRLLAGTGLTYRRIGGNTIVLSP 51
|
|
| STN |
pfam07660 |
Secretin and TonB N terminus short domain; This is a short domain found at the N-terminus of ... |
65-113 |
3.92e-05 |
|
Secretin and TonB N terminus short domain; This is a short domain found at the N-terminus of the Secretins of the bacterial type II/III secretory system as well as the TonB-dependent receptor proteins. These proteins are involved in TonB-dependent active uptake of selective substrates.
Pssm-ID: 429580 [Multi-domain] Cd Length: 51 Bit Score: 41.73 E-value: 3.92e-05
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|
gi 489204697 65 IAFSPEQTAARRSQALD-GEYTLEEALAALLVGSGLEARaRGDGAYTLEA 113
Cdd:pfam07660 2 ILYDSDLVDGKQSVSLNvGNVTLEEALDQLLAGTGLSYE-IGGNTIVLRP 50
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| FecA |
COG4772 |
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism]; |
108-784 |
0e+00 |
|
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism];
Pssm-ID: 443804 [Multi-domain] Cd Length: 681 Bit Score: 633.50 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 108 AYTLEALPVEDPANLQALTVVGDWLADAsaaDVFEHPGARDVVRREQFQAQGAASTREVLERIPGVSAPLNNGTGshdLA 187
Cdd:COG4772 9 LLLAAAAAAEAATTLETVVVTGSRAAEA---RLKDVPGSVSVVDREELENQAATSLREVLRRVPGVNVQEEDGFG---LR 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 188 LNFGIRGLNPRLASRSTVLMDGIPVPFAPYGQPQLSLAPvSIGNMDAVDVVRGGGAVRYGPQNVGGIVNFVTRAIPEDFA 267
Cdd:COG4772 83 PNIGIRGLGPRRSRGITLLEDGIPIAPAPYGDPAAYYFP-DLERMERIEVLRGAAALRYGPQTVGGAINFVTRTIPTAFG 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 268 TKLDVhselspSSSQDGLKTTHNVLigGTGANGLGGALLYSGTRGGDWREHSDTRIDDLILKGRFQPSDEHTFSAMTQYY 347
Cdd:COG4772 162 GELRV------TGGSFGYRRTHASV--GGTVGNFGYLVEYSRKRGDGFRDNSGFDINDFNAKLGYRLSDRQELTLKFQYY 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 348 DGEADMPGGLGTAAYHDDPYQSTRPYDKFWGRRTLASASYEYTPNASQKLNVTGFFTKTLRSGYLDQ--------GRNLT 419
Cdd:COG4772 234 DEDANTPGGLTDAQFDADPRQSYRPADQFDTRRTQLSLRYEHQLSDNTTLTTTAYYNDFSRNWYIRQntadpntpGLGLR 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 420 LSPREYWVRGLETRFSQGFELGESRHEVGIGHRYVNEASHELRYWTRADSGQlpsTGSRNDRDTRGSTEANAFYIDDRID 499
Cdd:COG4772 314 GNPRGYRSYGIEPRLTHRFELGGVPHTLEVGLRYHREEEDRKQYVNTYGQGR---SGAGLRRDRRFSADALAAYAQNRFE 390
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 500 I-GNWTITPGIRYEKIDSEQKNLLK-----NSKDSGRYNASLPALNVIYHLTPSWNLYANTEGSFGTVQYSQMGKAVRS- 572
Cdd:COG4772 391 LtGRLTLTPGLRYEHIRRDRTDRYStrtggDDSGSNSYSEFLPGLGLLYQLTDNLQLYANVSRGFEPPTFGDLAYGNGGn 470
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 573 GDIEPEKARTWELGSRYD-DGILRAELGAFLINFDNQYESNQ----QTDSVTARGKTRHKGIEAAIAYDLAdlDPLLSGF 647
Cdd:COG4772 471 PDLKPEKSWNYELGTRGRiGNGLSAEVALFYIDYDNELGSCSaaggDRSTFTNAGETRHQGLELALDYDLL--KGGGLGL 548
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 648 DVYASYAYVDASIRE--DGPNKGNQVPFSSKHKGTLGANYRTGAWSYNLDGSFQTSQYADNANTEsesADGSTGRIAGWM 725
Cdd:COG4772 549 PLFAAYTYTDAEFTSdfGPVFAGNRLPYVPRHQLTAGLGYEHGGWTANLNGRYVSEQFTDAANTV---ADGSFGKIPSYT 625
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|....*....
gi 489204697 726 VWSARGTYDFGPqlnDLKLGLGVKNLFDRRYYTRSFDDNNKGLYVGQPRTLYVQASVGF 784
Cdd:COG4772 626 VLDLSASYDFGK---NLSLFAGVNNLFDKRYIASRAPNYAAGIRPGPPRTVYAGLRLKF 681
|
|
| TonB-siderophor |
TIGR01783 |
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of ... |
142-784 |
3.60e-129 |
|
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of TonB-dependent outer membrane siderophore receptors. It has no overlap with TonB receptors known to transport other substances, but is likely incomplete due to lack of characterizations. It is likely that genuine siderophore receptors will be identified which score below the noise cutoff to this model at which point the model should be updated. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273805 [Multi-domain] Cd Length: 651 Bit Score: 399.48 E-value: 3.60e-129
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 142 EHPGARDVVRREQFQAQGAASTREVLERIPGVSAPLNNGTGSHDlalNFGIRGLNPRlASRSTVLMDGIPVPFAPygqpq 221
Cdd:TIGR01783 1 DIPQSVSVITRQELEDQQAGSLSEALQRVPGVVVGGSGGTTQFG---NITIRGFGLE-VDIDNVYLDGVPLLSRG----- 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 222 lSLAPVSIGNMDAVDVVRGGGAVRYGPQNVGGIVNFVTRAIPEDFATKLDVHSelsPSSSQDGLKTTHNVLIGGTGANGL 301
Cdd:TIGR01783 72 -NLAIVDPAMVERVEVLRGPASLLYGGSAPGGVINIVTKRPQDEPKGSVTFGA---GTRSGYRTAFDLGGPLGADGTFRG 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 302 ggALLYSGTRGGDWREHSDTRIDDLILKGRFQPsDEHTFSAMTQYYDGEADMPGGLGTAA--------YHDDPYQST--- 370
Cdd:TIGR01783 148 --RLNGARQDGDSFYDGAGEETRLGATATDWQL-DDRTLLRLGAYYQKERDRGGYGGLPAsggtsgrdLSSDRYLGTssn 224
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 371 RPYDKFWGRRTLASASYEYTPNASQKLNVTGFFTKTLR-----SGYLDQGRNLTLSPREYWVR----GLETRFSQGFELG 441
Cdd:TIGR01783 225 RNYDDREYLSYGLSLEYQFNDVWTGKQNLRYSYFDTDSnqvqaSGYSSDGGLFGRSLTVVNVKqdrvQIDAGLDGEFETG 304
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 442 ESRHEVGIGHRY----------VNEASHELRYWTRADSGQLPSTGSRNDRDTRGSTEA-NAFYIDDRIDIGNWTITPGIR 510
Cdd:TIGR01783 305 PIEHDLLLGVSYgqrttnrfnnTGYPSDNIYSLTATSSARTDIGDSPKDRALSSTTKAlNGVALQRILLADKWTLTLGGR 384
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 511 YEKIDSEQKNLLKNSKDSGRYNASLPALNVIYHLTPSWNLYANTEGSFGTVQYSQMGKAVRSGDIEPEKARTWELGSRYD 590
Cdd:TIGR01783 385 YDSVDVKSNNGVAGSTGKRDDSQFTPSLGVAYKPTDDWSLYASYAESFKPGGYYPKGAGNSGDILEPEKGKNYELGVRYD 464
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 591 DG-ILRAELGAFLINFDNQYESNQQTDSVTAR-GKTRHKGIEAAIAYDLADldpllsGFDVYASYAYVDASIREDGP--N 666
Cdd:TIGR01783 465 LGdSLLATAALFRITKDNQLVQDPVNGTFSVNaGKTRNRGVELEARGYLTP------GLSLSAGYTYTDAEFTEDTNgdT 538
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 667 KGNQVPFSSKHKGTLGANYRTGAWSYNLdGSFQTSQYADNANteseSADGSTGRIAGWMVWSARGTYDFGPQLNdLKLGL 746
Cdd:TIGR01783 539 QGNTVPFVPKHTASLWASYAPPVGDNGL-TLGGGVQYTGKAY----VDGGNTGKVPSYTVVDLSVRYDLTKKKN-LTLAL 612
|
650 660 670
....*....|....*....|....*....|....*....
gi 489204697 747 GVKNLFDRRYYTRSFD-DNNKGLYVGQPRTLYVQASVGF 784
Cdd:TIGR01783 613 NVNNLFDRDYYTSGYRwGPSAYIYPGAPRTVGLSVSYDF 651
|
|
| ligand_gated_channel |
cd01347 |
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ... |
148-784 |
2.03e-89 |
|
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.
Pssm-ID: 238657 [Multi-domain] Cd Length: 635 Bit Score: 294.74 E-value: 2.03e-89
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 148 DVVRREQFQAQGAASTREVLERIPGVSAPLNNGTGshdlALNFGIRGLNPrlaSRSTVLMDGIPVPFAPYGQpQLSLAPV 227
Cdd:cd01347 3 SVITAEDIEKQPATSLADLLRRIPGVSVTRGGGGG----GSTISIRGFGP---DRTLVLVDGLPLASSNYGR-GVDLNTI 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 228 SIGNMDAVDVVRGGGAVRYGPQNVGGIVNFVTRAIPEDFATKLDVHSELSPSSSQDGlkTTHNVLIGGTGANGLGGALLY 307
Cdd:cd01347 75 PPELIERVEVLKGPSSALYGSGAIGGVVNIITKRPTDEFGGSVTAGYGSDNSGSSGG--GGFDVSGALADDGAFGARLYG 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 308 SGTRGGDW------REHSDTRIDDLILKGRFQPSDEHTFSAMTQYYDGEADMPGGLGTAAYH--------DDPYQSTRPY 373
Cdd:cd01347 153 AYRDGDGTidgdgqADDSDEERYNVAGKLDWRPDDDTRLTLDAGYQDQDADGPGGTLPANGTgsslgggpSSNTNGDRDW 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 374 DKFWGRRTLASASYEYTPN---ASQKLNVT----------GFFTKTLRSGYLDQGRNLTLSPREYWVRGLETRFSQGFEL 440
Cdd:cd01347 233 DYRDRYRKRASLGLEHDLNdtgWTLRANLSysytdndgdpLILNGGNNAAGGDLGRSGYSSERDTTQLGFDAGLNAPFGT 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 441 GESRHEVGIGHRYVNEashelrywtradsgqlpstgsRNDRDTrgsteaNAFYIDDRIDIG-NWTITPGIRYEKIDSEQK 519
Cdd:cd01347 313 GPVAHTLTLGVEYRRE---------------------ELDEKQ------TALYAQDTIELTdDLTLTLGLRYDHYDQDSK 365
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 520 NLLK-NSKDSGRYNASLPALNVIYHLTPSWNLYANTEGSFGTVQYSQM--------GKAVRSGDIEPEKARTWELGSRYD 590
Cdd:cd01347 366 DTIAgGTTAKKSYSHWSPSLGLVYKLTDGLSLYASYSQGFRAPSLGELygggshggTAAVGNPNLKPEKSKQYELGLKYD 445
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 591 -DGILRAELGAFLINFDNQYESNQQTDSV------TARGKTRHKGIEAAIAYDLADldpllsGFDVYASYAYVDASIRE- 662
Cdd:cd01347 446 pGDGLTLSAALFRIDIKNEIVSTPTNTGLglvtvyVNGGKARIRGVELEASYDLTD------GLGLTGSYTYTDTEVKRt 519
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 663 DGPNKGNQVPFSSKHKGTLGANYRTGA--WSYNLDGSFQTSQYADNANTesesadGSTGRIAGWMVWSARGTYDFGPqln 740
Cdd:cd01347 520 DGATTGNRLPGIPKHTANLGLDYELPDegLTAGGGVRYRGKQYADTANG------NNTVKVPGYTLVDLSASYQFTK--- 590
|
650 660 670 680
....*....|....*....|....*....|....*....|....*
gi 489204697 741 DLKLGLGVKNLFDRRYYTR-SFDDNNKGLYVGQPRTLYVQASVGF 784
Cdd:cd01347 591 NLTLRLGVNNLFDKDYYTSlSVRGSGLYGYYGPGRTYYLSVSYKF 635
|
|
| CirA |
COG1629 |
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism]; |
122-770 |
1.35e-86 |
|
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism];
Pssm-ID: 441236 [Multi-domain] Cd Length: 644 Bit Score: 287.49 E-value: 1.35e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 122 LQALTVVgdwlADASAADVFEHPGARDVVRREQFQAQGAASTREVLERIPGVSAPLNNGTGShdlalNFGIRGLNpRLAS 201
Cdd:COG1629 1 LEEVVVT----ATRTDESLQDVPGSVSVISREQLEDQPATDLGDLLRRVPGVSVTSAGGGAG-----QISIRGFG-GGGN 70
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 202 RSTVLMDGIPVPFAPYGQPQLSLAPVSigNMDAVDVVRGGGAVRYGPQNVGGIVNFVTRAIPEDFatkldvHSELSPSSS 281
Cdd:COG1629 71 RVLVLVDGVPLNDPSGGDGGLSYIDPE--DIERVEVLRGPSSALYGSGALGGVINIVTKKPKDGK------GGEVSASYG 142
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 282 QDGLKTTHnvlIGGTGANGLGGALL-YSGTRGGDWREHSDTRIDDLILKGRFQPSDEHTFSAMTQYYDGEADMPGGLGTA 360
Cdd:COG1629 143 SYGTYRAS---LSLSGGNGKLAYRLsASYRDSDGYRDNSDSDRYNLRAKLGYQLGDDTRLTLSASYSDSDQDSPGYLTLA 219
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 361 AY------HDDPYQSTRPYDKFWGRRTLASASYEYTPNASqKLNVTGFFTKTLRSGYLD------QGRNLTLSPREYWVR 428
Cdd:COG1629 220 ALrprgamDDGTNPYSNDTDDNTRDRYSLSLEYEHLGDGL-KLSASAYYRYDDTDLDSDftptpaDGGTLEQTDFDNRTY 298
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 429 GLETRFSQGFELGeSRHEVGIGHRYVNEASHELRYWTRADSGQLPSTGSRNDRDTRgsTEANAFYIDDRIDIG-NWTITP 507
Cdd:COG1629 299 GLELRLTYDLGFG-GKHTLLVGLDYQRQDLDGSGYPLDLGSGSLPTLTSGADDDGT--TTSLALYAQDTYKLTdKLTLTA 375
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 508 GIRYEKIDSEQKNLLKNSKDSGR---YNASLPALNVIYHLTPSWNLYANTEGSFGTVQYSQMGKAVRSG------DIEPE 578
Cdd:COG1629 376 GLRYDYVSYDVDDTVTGTDSASGsrsYSAFSPSLGLTYQLSPNLSLYASYSRGFRAPTFGELYANGTDPysvgnpDLKPE 455
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 579 KARTWELGSRYD--DGILRAELGAFLINFDNQYESNQQTDSVTAR------GKTRHKGIEAAIAYDLADldpllsGFDVY 650
Cdd:COG1629 456 TSTNYELGLRYRllDGRLSLSLALFYSDVDNEILSVPLPNDSGFStyytnaGKARSYGVELELSYQLTP------GLSLN 529
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 651 ASYAYVDASIREDGPN----KGNQVPFSSKHKGTLGANYR-TGAWSYNLDGSFQTSQYADNANTEsesadgstGRIAGWM 725
Cdd:COG1629 530 ASYSYTDAKFDDDTDGsadlDGNRLPGVPPLTANLGLTYEfPGGWSLGLGVRYVGDRYLDDANTQ--------GAPGGYT 601
|
650 660 670 680
....*....|....*....|....*....|....*....|....*
gi 489204697 726 VWSARGTYDFGpqlNDLKLGLGVKNLFDRRYYTRSFDDNNKGLYV 770
Cdd:COG1629 602 LVDLGAGYRFG---DNLTLSLGVDNLFDKKYATSLSVRASNVRGF 643
|
|
| Fiu |
COG4774 |
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism]; |
148-784 |
1.45e-71 |
|
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism];
Pssm-ID: 443806 [Multi-domain] Cd Length: 639 Bit Score: 246.71 E-value: 1.45e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 148 DVVRREQFQAQGAASTREVLERIPGVSApLNNGTGSHDlalNFGIRGLNprlaSRSTVLMDGIPVPfapygqpqlSLAPV 227
Cdd:COG4774 14 TVVTRELIEDQGATSLADALRNVPGVTF-GAGEGGNGD---SFSIRGFS----ASGDIYVDGLRDP---------GQYRR 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 228 SIGNMDAVDVVRGGGAVRYGPQNVGGIVNFVT-RAIPEDFAtkldvhsELSPSSSQDGLKTTH---NVLIggtganglGG 303
Cdd:COG4774 77 DTFNLERVEVLKGPASVLYGRGSPGGVINLVTkRPTDEPFT-------EVTLTYGSDGQRRATldvNGPL--------GD 141
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 304 ALLY----SGTRGGDWREHSDTRIDDLILKGRFQPSD--EHTFSAMTQYYDGEAD--MPGGLGTAAYHDDPyqSTR---P 372
Cdd:COG4774 142 DLAYrlngMYRDSDSYRDGVDNDRWGIAPSLTWRLGDrtRLTLDYEYQDDDRTPDygVPAVANGRPVDVDR--STFygqP 219
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 373 YDKFWGRRTLASASYEYTPNASQKLNVTGFFTKTLRSG------YLDQGRNLTLSP----REYWVRGLETRFSQGFELGE 442
Cdd:COG4774 220 DDYSDSETDSATLRLEHDFNDNWTLRNALRYSDYDRDYrntyptGGNATGTVTRSAyrrdQDNDTLSNQTDLTGKFDTGG 299
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 443 SRHEVGIGHRYVNEASHELRYWTRA----------DSGQLPSTGSRNDRDTRGSTEANAFYIDDRIDIG-NWTITPGIRY 511
Cdd:COG4774 300 VKHTLLAGVEYSREDSDNARYSGGGtaptvnlynpVYGAPVTGPTLGGADNDSRTDTTGLYLQDTISLTdRWSLLAGLRY 379
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 512 EKIDSEQKNLLKNSKDSGR-YNASLPALNVIYHLTPSWNLYANTEGSFgTVQYSQMGKAVRSGDIEPEKARTWELGSRYD 590
Cdd:COG4774 380 DRFDTDYTDRTTGATTSSYdDSAFSPRAGLVYKPTPNLSLYASYSTSF-NPGGGAPSLSNAGQALDPEKSRQYEVGVKWD 458
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 591 --DGILRAELGAFLINFDNQYESNQQTDSVTA-RGKTRHKGIEAAIAYDLADldpllsGFDVYASYAYVDASIRED--GP 665
Cdd:COG4774 459 llDGRLSLTAALFRIEKTNVRTTDPANPGVYVqTGEQRSRGVELEATGELTP------GWSVLAGYTYLDAEITKSanAA 532
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 666 NKGNQVPFSSKHKGTLGANYRTGA--WSYNLDGSFQTSQYADNANtesesadgsTGRIAGWMVWSARGTYDFGPqlnDLK 743
Cdd:COG4774 533 NVGNRLPNVPRHSASLWTTYDLPLpgLTLGGGVRYVGSRYADAAN---------TVKLPSYTRFDAGASYRLNK---NLT 600
|
650 660 670 680
....*....|....*....|....*....|....*....|.
gi 489204697 744 LGLGVKNLFDRRYYTRSFDDNNkgLYVGQPRTLYVQASVGF 784
Cdd:COG4774 601 LRLNVNNLTDKRYYASAYGSGY--VTPGAPRTVLLSASYRF 639
|
|
| FhuE |
COG4773 |
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion ... |
90-784 |
2.42e-67 |
|
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion transport and metabolism];
Pssm-ID: 443805 [Multi-domain] Cd Length: 692 Bit Score: 236.33 E-value: 2.42e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 90 LAALLVGSGLEARARGDGAYTLEALPvEDPANLQALTVVGDWLADAS------------AADVFEHPGARDVVRREQFQA 157
Cdd:COG4773 1 AAALLAGSGLAAAAAGALAQAAAAAA-AEATTLPEVTVTGTAEGTGGytakssstatklDTPLRETPQSVSVVTRQLIED 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 158 QGAASTREVLERIPGVSApLNNGTGSHDlalNFGIRGLNPrlasrSTVLMDGIPVPFAPYGQPQLSlapvsigNMDAVDV 237
Cdd:COG4773 80 QGATTLDDALRNVPGVTV-SSYDGGGRD---SFSIRGFSI-----DNYLRDGLPLGGFGGGQPDTA-------NLERVEV 143
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 238 VRGGGAVRYGPQNVGGIVNFVTRAIPEDFATKLDVhselspSSSQDGLKTTH-------NvliggtgangLGGALLY--- 307
Cdd:COG4773 144 LKGPAGLLYGAGSPGGLVNLVTKRPTAEPQGEVSL------SAGSWDTYRATadvggplN----------EDGTLRYrln 207
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 308 -SGTRGGDWREHSDTRIDDLILKGRFQPSDEHTFSAMTQYYDGEADMPGGLGTAAYHDDPYQSTR----PYDKFWGRRTL 382
Cdd:COG4773 208 aAYEDGDSFRDGVDNRRTLIAPSLDWDLTDDTTLTLGAEYQDDDSTGDRGFLPLDGTLLDLPRSTnlgePWDYYDTETTT 287
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 383 ASASYEYTPNASQKLNVTGFFTKTLRSGYL------------DQGRNLTLSPREYWVRGLETRFSQGFELGESRHEVGIG 450
Cdd:COG4773 288 LFAELEHRFNDDWSLRANARYSDSDRDGRSayaygapdaatgTLTRYASARDGDSRSDSLDANLNGKFETGGLEHTLLVG 367
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 451 HRYVNEASHELRYWTRA------DSGQLPSTGSRNDrDTRGSTEANAFYIDDRIDIG-NWTITPGIRYEKIDSEQKNLLK 523
Cdd:COG4773 368 ADYSRYDSDSDSATAGTiniynpVYGNLPEPDFDAS-DTDTTTRQTGLYAQDQISLTdRLSLLLGGRYDWYETDSTNRLG 446
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 524 NSKDSGRYNASLPALNVIYHLTPSWNLYANTEGSFgtvqYSQMGKAVRSGDIEPEKARTWELGSRYD--DGILRAELGAF 601
Cdd:COG4773 447 GSTTSYDDSAFTPRAGLVYDLTPGLSLYASYSESF----EPQSGADNNGNPLDPETGKQYEAGVKGElfDGRLNATLAVF 522
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 602 LINFDNQYESNQQTDSV-TARGKTRHKGIEAAIAYDLADldpllsGFDVYASYAYVDASIREDGP-NKGNQVPFSSKHKG 679
Cdd:COG4773 523 DITQKNVATTDPDNPNFyVQVGEVRSRGVELELSGELTP------GLNLIAGYTYTDAKITKDADaLEGKRLTNVPRHTA 596
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 680 TLGANYRTGA-----WSYNLDGSFQTSQYADNANTEsesadgstgRIAGWMVWSARGTYDFGPqlnDLKLGLGVKNLFDR 754
Cdd:COG4773 597 SLWTTYRFPSgalkgLGLGGGVRYVGERYGDAANTF---------TLPSYTLVDAGARYDLGK---NWTLQLNVNNLFDK 664
|
730 740 750
....*....|....*....|....*....|
gi 489204697 755 RYYTRSFDDNNkgLYVGQPRTLYVQASVGF 784
Cdd:COG4773 665 KYYASSGSRGY--VYYGAPRNVRLSLSYKF 692
|
|
| FepA |
COG4771 |
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and ... |
117-740 |
4.25e-58 |
|
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and metabolism];
Pssm-ID: 443803 [Multi-domain] Cd Length: 612 Bit Score: 208.94 E-value: 4.25e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 117 EDPANLQALTVVgdwlADASAADVFEHPGARDVVRREQFQAQGAASTREVLERIPGVSAPLNNGTGShdlALNFGIRGLN 196
Cdd:COG4771 22 EDATELEEVVVT----ATRTEQSLSDAPASVSVITAEEIEKLGATDLADALRLLPGVSVTRSGGRGG---SSGISIRGLG 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 197 PRlasRSTVLMDGIPVPFAPYGQPqLSLAPVSIGNMDAVDVVRGGGAVRYGPQNVGGIVNFVTRAIPEDFATKLDVHsel 276
Cdd:COG4771 95 GD---RVLVLIDGVPVNNPALGGG-GDLSYIPPDDIERIEVIRGPASALYGSDAIGGVINIITKKPTDELEGSVSLG--- 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 277 spSSSQDGLKTTHNVLIGGTGANGLGGALL-------YSGTRGGDWREHSDTRIDDLILKGRFQPSDEHTFSAMTQYYDG 349
Cdd:COG4771 168 --YGSNGNGTYSGSLSLGGPGDKLSFLLSGsyrdrdgYLDYRNGGFVGNSGYERYNLNAKLGYRLSDNHRLSLSGGYSRQ 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 350 EADMPGGLGTAAYHDDPYQSTRPYDKfwgRRTLASASYEYTPNASQKLNVTGFFTKTLRSGYLDQGRNLTLSPREYWVRG 429
Cdd:COG4771 246 DRDGGPPTLGDTEISSDNAGDRDTTT---DRGNYSLRYNGDLGDNLDLSLYYSRTDRDSTNGSLGGSTGSFSDSDDTTYG 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 430 LETRFSQGFelgESRHEVGIGHRYVNEASHELRYWTRADsgqlpstgsrndrdtrGSTEANAFYIDDRIDIG-NWTITPG 508
Cdd:COG4771 323 LELDLTYPL---GGNHTLTLGAEYRYDDLDSSSFLGGAD----------------ASRDTYGLFAQDEWKLTdKLTLTAG 383
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 509 IRYEKIdseqknllkNSKDSGRYNASLPALNVIYHLTPSWNLYANTEGSFGTVQYSQMGKAVRSG---------DIEPEK 579
Cdd:COG4771 384 LRYDYY---------STFGASNYTAFSPRLGLRYDLSDNLTLRASYGRGFRAPSLAELYGSGTGTpgryvlgnpDLKPET 454
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 580 ARTWELGSRYD--DGILRAELGAFLINFDNQYESNQQTDSVTA------RGKTRHKGIEAAIAYDLADldpllsGFDVYA 651
Cdd:COG4771 455 SDNYELGLEYRlgNGGLSLSLTGFYTDIKDLIVLVPVGPGPGDvlqyenVGKARTYGLELELKYRLGK------GLTLTA 528
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 652 SYAYVDASIREDGPNkgNQVPFSSKHKGTLGANYRTGAWSYNLDGSFQTSQYADNANTESesadgSTGRIAGWMVWSARG 731
Cdd:COG4771 529 SYTYLDSKIDDGDTG--EPLPNVPPHKANLGLDYRLPKWWLLLLLTRYYGGRYVTPPSGR-----LEGYTPGYTLLDLRA 601
|
....*....
gi 489204697 732 TYDFGPQLN 740
Cdd:COG4771 602 SYKLTKNLT 610
|
|
| TonB_dep_Rec |
pfam00593 |
TonB dependent receptor; This model now only covers the conserved part of the barrel structure. |
314-782 |
6.38e-48 |
|
TonB dependent receptor; This model now only covers the conserved part of the barrel structure.
Pssm-ID: 395474 [Multi-domain] Cd Length: 475 Bit Score: 176.88 E-value: 6.38e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 314 DWREHSDTRIDDLILKGRFQPSDEHTfsamtQYYDGEADMPGGLGTAAYHDDPYQSTRPYDKFWGRRTLASASYEYTPNA 393
Cdd:pfam00593 1 GWQLSLDLLGDDTLLTLGYDYSRYTD-----GLDLGLTLDGYGNDGGYLGDRPLYYGRDYSDTDRKRLSLGYDYDLGDGL 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 394 S--QKLNVTGFFTK-----TLRSGYLDQGRNLTLSPREYWVRGLETRFSQGFELgesRHEVGIGHRYVNEAShELRYWTR 466
Cdd:pfam00593 76 SwlSTLRLGLRYSSldgdyTSNSSGLSGAGDYLSDDRLYGLYGLDGDLELSLDL---SHDLLLGVELRTAGL-DYRRLDD 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 467 ADSGQLPSTGSRNDRDTRGSTEANAFYIDDRIDI-GNWTITPGIRYEKIDSEQKNLLKNSKDSGR-YNASLPALNVIYHL 544
Cdd:pfam00593 152 DAYDPYDPANPSSSSYSDTTTDSYGLYLQDNIKLtDRLTLTLGLRYDHYSTDGDDGNGGGDNFSRsYSAFSPRLGLVYKP 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 545 TPSWNLYAN----------TEGSFGTVQYSQMGKAVRSGDIEPEKARTWELGSRYDDGILRAELGAFLINFDNQYESNQQ 614
Cdd:pfam00593 232 TDNLSLYASysrgfrapslGELYGSGSGGGGGAVAGGNPDLKPETSDNYELGLKYDDGRLSLSLALFYIDIKNLITSDPD 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 615 TDSVTAR-------GKTRHKGIEAAIAYDladldpLLSGFDVYASYAYVDASIREDGPNKGNQVPFSSKHKGTLGANYR- 686
Cdd:pfam00593 312 GPGLGGTvytytnvGKARIRGVELELSGR------LWGLGLSGGGYTYTDADDDADADDTGNPLPNVPRHTANLGLTYDf 385
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 687 -TGAWSYNLDGSFQTSQYADNANtesesaDGSTGRIAGWMVWSARGTYDFGpqlNDLKLGLGVKNLFDRRY-YTRSFDDN 764
Cdd:pfam00593 386 pLGGWGARLGARYVGSGERRYGD------AANTFKTPGYTLVDLSAGYRLN---KNLTLRLGVNNLFDKYYkRYYSSGGG 456
|
490
....*....|....*...
gi 489204697 765 NKGLYVGQPRTLYVQASV 782
Cdd:pfam00593 457 NLGGYPGPGRTFYLGLSY 474
|
|
| TonB-hemlactrns |
TIGR01786 |
TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein; This model ... |
133-758 |
1.79e-41 |
|
TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein; This model represents a family of TonB-dependent outer membrane receptor/transporters acting on iron-containing proteins such as hemoglobin, transferrin and lactoferrin. Two subfamily models with a narrower scope are contained within this model, the heme/hemoglobin receptor family protein model (TIGR01785) and the transferrin/lactoferrin receptor family model (TIGR01776). Accessions which score above trusted to this model while not scoring above trusted to the more specific models are most likely to be hemoglobin transporters. Nearly all of the species containing trusted hits to this model have access to hemoglobin, transferrin or lactoferrin or related proteins in their biological niche. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273808 [Multi-domain] Cd Length: 715 Bit Score: 162.20 E-value: 1.79e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 133 ADASAADVFEHPGARDVVRREQFQAQGAASTREVLERIPGVSAplnNGTGShDLALNFGIRGLNPrlaSRSTVLMDGIPV 212
Cdd:TIGR01786 11 ADPQRRDLSVTPASVSVISREQLKSQQVRNLRDLLRYEPGVSV---VEGGR-GGSQGINIRGLDK---NRVAVLVDGIRQ 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 213 PFAPYGQPQLSLAPVSIG--NMDAVDVVRGGGAVRYGPQNVGGIVNFVTRAiPEDFAT---KLDVHSELSPSSSQDGLKT 287
Cdd:TIGR01786 84 NTSYGGQGSTFYAINSIDpeLIKSIEIVKGASSSLYGSGALGGVVAFRTKD-AADLLKpgkDLGGLSKLGYSSANNRFTQ 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 288 THNVligGTGANGLGGALLYSGTRGGDWREHSDTRIDDLI----------------LKGRFQPSDEHTFSAMTQYYDGEA 351
Cdd:TIGR01786 163 SVAA---AGRNDDVDALVQATYRRGHELKNGNKANIGNESkrskpnpsdyksqsflAKLGWQLNDAHRLGLSLEYTQTDY 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 352 DMPGGLGTAaYHDDPYQSTRPYDKF-------WGRRTlaSASYEYTPNAS-----------QKLNVTGFFTKTLRSGY-- 411
Cdd:TIGR01786 240 DEPEMTNTS-YLTKPLGAPLLSSTVvlgdsktRDRRT--GLDYELNPDNSwldtvklaldkQYIQLYNYLNATSASDYpg 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 412 LDQGRNLTLSpREYWVRGLETRFSQGFelGESRHEVGIG-HRYVNEASHELRYWTRADSGQLPSTGSRNDRDTRGSTEAn 490
Cdd:TIGR01786 317 VDKNGRYKDK-YDYYTLGFDTNNKIEF--SVHSLSLTYGlDRFKDKVSTGDSRRNLPTAAYNLYGYEGENRPVKGSNFG- 392
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 491 aFYIDDRIDIGNW-TITPGIRYE--KIDSEQKNLLKNSKDSGRYNASLPALNVIYHLTPSWNLYANTEGSFGTVQYSQM- 566
Cdd:TIGR01786 393 -LFLQDNIKLGDWlSLSAGLRYDhyKTDPKADESKDYGAISKTYSRWSPSLGLTYKPTPWLTLYYSYSQGFRAPSFDELy 471
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 567 ----------GKAVRSGDIEPEKARTWELGSRYDDGILRAELGAF------LINF---------DNQYESNQQTDSVTAR 621
Cdd:TIGR01786 472 gtgahpgggpYTFLPNPNLKPETSKNWEIGINLHFDQLDFKVSYFrndykdFIDLgigvtakgnMAQVGSNTITNYVNID 551
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 622 GkTRHKGIEAAIAYDLADLDPLLSGFDVYASYAYVdasireDGPNKGNQVPFSS--KHKGTLGANYRT--GAWSYNLDGS 697
Cdd:TIGR01786 552 N-ARIRGIELSGRYDLGSFFSGPDGWTTTLKYGYT------KGKDSDTNPWLNAitPLKVVLGLGYDHpdEKWGVGLTLT 624
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 489204697 698 FQTSQYADNA-NTESESADGSTG---RIAGWMVWSARGTYDFgpqLNDLKLGLGVKNLFDRRYYT 758
Cdd:TIGR01786 625 FSGAKDAVDAyATYYENGEAAKAgplRTPSYTVVDLYGYYKP---NKNLTLRFGVYNLLDRKYTT 686
|
|
| TonB-hemin |
TIGR01785 |
TonB-dependent heme/hemoglobin receptor family protein; This model represents the ... |
140-784 |
5.46e-39 |
|
TonB-dependent heme/hemoglobin receptor family protein; This model represents the TonB-dependent outer membrane heme/hemoglobin receptor/transporter found in bacteria which live in contact with animals (which contain hemoglobin or other heme-bearing globins) or legumes (which contain leghemoglobin). Some species having hits to this model such as Nostoc, Caulobacter and Chlorobium do not have an obvious source of hemoglobin-like proteins in their biological niche and so the possibility exists that they act on some other substance. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273807 [Multi-domain] Cd Length: 665 Bit Score: 154.09 E-value: 5.46e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 140 VFEHPGARDVVRREQFQAQGAASTREVLERIPGVSAplnNGTGShDLALNFGIRGLNPrlaSRSTVLMDGIPVPFApYGQ 219
Cdd:TIGR01785 15 LSEAPASVSVISGEQIESKQANNLADALNTVPGVDV---TGGGR-PPGQSINIRGLQD---NRVLVVVDGARQNYQ-RGG 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 220 PQLSLAPVSIGNMDAVDVVRGGGAVRYGPQNVGGIVNFVTRAIPEDFATKLDVHSELSPSSSQDGLKTTHNVLIGGTGAN 299
Cdd:TIGR01785 87 AHNGSLFVDPELLKRIEIVKGPSSSLYGSGALGGVVAFRTKDAADLLRPGQLFGGLAKLSYGSNNNSFGGSVAVAGRLDD 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 300 GLGGALLYSGTRGGDWR-------EHSDTRIDDLILKGRFQPSDEHTFSAMTQYYDGEADMP--GGLGTaayhDDPYQST 370
Cdd:TIGR01785 167 NLDALVAATYRDGGNYRngnkeeaTNSAYVQKNLLAKLGWQLDDAQRLEFSYFTTEGSLDEAqnSGPGT----EYVLGSS 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 371 RPYDKFWGRRTLASASYEYTPNASQKLNVTG--FFTKTLRSGYLDQGRNLTLSPREYWVRGLETRFSQGFELGESRHEVG 448
Cdd:TIGR01785 243 STLLASSTRDRSATLTYNWTPEDNPWLDATAslYYNRTENDNDRSARGVGREEGYQYTTYGATLQNTSRFDVASWSTLTY 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 449 IGHRYvneashelRYWTRADSGQLPSTGSRNDRDTRGSTEANAFYIDDRIDIGN--WTITPGIRYEKIDSEQKNLLKNSK 526
Cdd:TIGR01785 323 GVDWM--------KDKRRTESFDPNSVTTIVPNPPSAKEYFFGLFLQDNIPLLDdrLTLSAGLRYDHYKLSPKTTADTEA 394
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 527 DSGRYNASLPALNVIYHLTPSWNLYAN-TEG----SFGTVQYSQMGKAVRSG-------DIEPEKARTWELGSRY----- 589
Cdd:TIGR01785 395 VDRSYSRWSPSLGLSYKPVDWLTLYASySQGfrapSIDELYGTGDHPGTPGGytfapnpNLKPETSKTWELGANLsfdnl 474
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 590 --DDGILRAELGAFLINFDNQYESNQ-QTDSVTARG----------KTRHKGIEAAIAYDLADldpllsgFDVYASYAYV 656
Cdd:TIGR01785 475 llDNDQLQFKVAYFYNDVKDFIDLTIgVTDNVTAGMnnitqyvnidGARIRGIEASASYDAGL-------WATGLSYGYT 547
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 657 dasireDGPNKGNQVPFSS--KHKGTLGANYRTGAW--SYNLDGSFQTSQyaDNANTESESADGSTGRIAGWMVWSARGT 732
Cdd:TIGR01785 548 ------IGKDQNTNQWLSNipPLKLVVTVGYRFPDRrlDLGAKAAYYERQ--SESPTTEDVAANGLLTTPGYTVVDLYAT 619
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|..
gi 489204697 733 YDFGpQLNDLKLGLGVKNLFDrRYYTRSFDDnnkgLYVGQPRTLYVQASVGF 784
Cdd:TIGR01785 620 YQPN-AVKGLTVRFGVNNLTD-RKYTPAQSV----PGAGPGRNFKGSVKYQF 665
|
|
| BtuB |
COG4206 |
Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism]; |
144-411 |
7.27e-22 |
|
Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism];
Pssm-ID: 443355 [Multi-domain] Cd Length: 276 Bit Score: 96.48 E-value: 7.27e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 144 PGARDVVRREQFQAQGAASTREVLERIPGVSAPLNNGTGShdlALNFGIRGLNprlASRSTVLMDGIPVPFAPYGQPQLS 223
Cdd:COG4206 16 TGSVTVIDAEELERSGATSLADALRRVPGVQVSSSGGPGS---AASISIRGLG---SNQTLVLIDGVPLNDPSLGGVDLS 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 224 LAPVSigNMDAVDVVRGGGAVRYGPQNVGGIVNFVTRAIPEDFATKLDVhselspSSSQDGLKTTHNVLIGGTGANGLGG 303
Cdd:COG4206 90 LIPPD--DIERIEVLKGAASALYGSDAIGGVINITTKKGKKGFKGSVSA------SYGSFGTRRLSASLSGGAGKFSYSL 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 304 ALLYSGTRG-----GDWREHSDTRIDDLILKGRFQPSDEHTFSAMTQYYDGEADMPGGLGTAAYHDDPYQSTRPYDKFWG 378
Cdd:COG4206 162 SASYRRSDGyryndPDLRNNDGYENTSLNARLGYKLGDNGSLSLSGGYSDSERGYPGAVGSDRNLRLSLSLEYKLSDGWS 241
|
250 260 270
....*....|....*....|....*....|...
gi 489204697 379 RRTLASASYEYTPNASQKLNVTGFFTKTLRSGY 411
Cdd:COG4206 242 LLLLAYYYYDRDYEDGGGDSAGTSNTDGARAGL 274
|
|
| Plug |
pfam07715 |
TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently ... |
139-254 |
2.45e-20 |
|
TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently folding subunit of the TonB-dependent receptors. It acts as the channel gate, blocking the pore until the channel is bound by ligand. At this point it under goes conformational changes opens the channel.
Pssm-ID: 462243 [Multi-domain] Cd Length: 107 Bit Score: 86.55 E-value: 2.45e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 139 DVFEHPGARDVVRREQFQAQGAASTREVLERIPGVSAPLNNGTGshdlALNFGIRGLNPrlaSRSTVLMDGIPVPFAPYG 218
Cdd:pfam07715 1 DLRDTPGSVSVVTAEDIEDQGATNLADALRGVPGVSVSSGGGGG----GSSISIRGFGS---NRVLVLVDGVPLNSGGGG 73
|
90 100 110
....*....|....*....|....*....|....*.
gi 489204697 219 QPQLSLAPVSigNMDAVDVVRGGGAVRYGPQNVGGI 254
Cdd:pfam07715 74 SVDLNSIDPE--DIERVEVLKGPASALYGSGAIGGV 107
|
|
| PRK13486 |
PRK13486 |
TonB-dependent receptor; |
149-756 |
1.47e-14 |
|
TonB-dependent receptor;
Pssm-ID: 139606 [Multi-domain] Cd Length: 696 Bit Score: 77.75 E-value: 1.47e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 149 VVRREQFQAQGAASTREVLERIPGVSapLNNGTGSHDlALNFGIRGLNprlASRSTVLMDGI----PVPFAPYGQPQLS- 223
Cdd:PRK13486 48 VISQEELQSSQYHDLAEALRSVEGVD--VESGTGKTG-GLEISIRGMP---ASYTLILIDGVrqggSSDVTPNGFSAMNt 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 224 --LAPVSIgnMDAVDVVRGGGAVRYGPQNVGGIVNFVTRAIPEDFATKLDVHSELSPS-----SSQDGLKTTHNVLIGGT 296
Cdd:PRK13486 122 gfMPPLAA--IERIEVIRGPMSTLYGSDAMGGVVNIITRKNADKWLSSVNAGLNLQESnkwgnSSQFNFWSSGPLVDDSV 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 297 GANGLGGALLYSGTRGGDWREHSDTRI------DDLILKGRF--QPSDEHTF----SAMTQYYDGEADMPGGLGTAayhd 364
Cdd:PRK13486 200 SLQVRGSTQQRQGSSVTSLSDTAATRIpyptesQNYNLGARLdwKASEQDVLwfdmDTTRQRYDNRDGQLGSLTGG---- 275
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 365 dpYQSTRPYDkfwgrRTLASASYEYTpnasqklnvtgfFTKTLRSGYLD------QGRNLT---LSPREYWVRGLETRFS 435
Cdd:PRK13486 276 --YDRTLRYE-----RNKISAGYDHT------------FTFGTWKSYLNwnetenKGRELVrsvLKRDKWGLAGQPRELK 336
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 436 QG---------FELGESrHEVGIGHRYVNEashelrywTRADSGQLPSTGSRNDRDTRGSTEANAFYIDDRIdignwTIT 506
Cdd:PRK13486 337 ESnlilnslllTPLGES-HLVTVGGEFQSS--------SMKDGVVLASTGETFRQKSWSVFAEDEWHLTDAL-----ALT 402
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 507 PGIRYEKidseqknllkNSKDSGRYNaslPALNVIYHLTPSWNLYANTEGSFGTVQYSQMGKAVR--SG----------D 574
Cdd:PRK13486 403 AGSRYEH----------HEQFGGHFS---PRAYLVWDVADAWTLKGGVTTGYKAPRMGQLHKGISgvSGqgktnllgnpD 469
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 575 IEPEKARTWELGSRYDDGI-LRAELGAFLINFDNQ---YESNQQTDSVTARGKTRHKGIEAAIAYDLADLDPLLSgfdvy 650
Cdd:PRK13486 470 LKPEESVSYEAGVYYDNPAgLNANVTGFMTDFSNKivsYSINDNTNSYVNSGKARLHGVEFAGTLPLWSEDVTLS----- 544
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 651 ASYAYVDASIReDGPNKGNQVPFSSKHKGTLGANYRT----GAW---SYNLDGSFQTSQYADNANTESESADGSTGRIAG 723
Cdd:PRK13486 545 LNYTWTRSEQR-DGDNKGAPLSYTPEHMVNAKLNWQIteevASWlgaRYRGKTPRFTQNYSSLSAVQKKVYDEKGEYLKA 623
|
650 660 670
....*....|....*....|....*....|...
gi 489204697 724 WMVWSARGTYDFgpqLNDLKLGLGVKNLFDRRY 756
Cdd:PRK13486 624 WTVVDAGLSWKM---TDALTLNAAVNNLLNKDY 653
|
|
| PRK09840 |
PRK09840 |
catecholate siderophore receptor Fiu; Provisional |
91-784 |
3.23e-13 |
|
catecholate siderophore receptor Fiu; Provisional
Pssm-ID: 182105 [Multi-domain] Cd Length: 761 Bit Score: 73.30 E-value: 3.23e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 91 AALLVGSGLEArARGDGAYTLEALPVEDPANLQALTVVGDWLADASAADVFEHPGAR-----DVVRREQFQAQGAASTRE 165
Cdd:PRK09840 15 LAFFAGLCIGI-TPVAQALAAEGQTNADDTLVVEASTPSLYAPDQSADPKFSQPLADttqtiTVISEQVIKDQGATNLTE 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 166 VLERIPGVSAPL--NNGTGSHDLALNfgIRGLNprlaSRSTVLMDGIPvpfapygqpqlSLAPVS--IGNMDAVDVVRGG 241
Cdd:PRK09840 94 ALRNVPGVGTFFagENGNTTTGDAIY--MRGFD----TSNSIYVDGIR-----------DIGSISrdTFNTEQVEVIKGP 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 242 GAVRYGPQNVGGIVNFVT----------------------------RAIPEDFATKLDVHSELSPSSSQDGLKTTHNVLI 293
Cdd:PRK09840 157 SGTDYGRSAPTGSINMISkqprndsgidasasigsawfrrgtldvnQVIGDTTAVRLNVMGEKTHDAGRDKVKNERYGVA 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 294 GGTGANGLGGALLYSGTRGGDWREHSDTRIDDLILKGRFQPSDEHTFSAMTqyydGEADMPGGLGTAAYHDDPYQSTrpy 373
Cdd:PRK09840 237 PSVAFGLGTANRLYLNYLHVTQNNTPDGGIPTIGLPGYSAPSAGRAALNHA----GKVDTHNFYGTDSDYDDSTTDT--- 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 374 dkfwgrrtlASASYEYTPNASQKLNVTGFFTKT----LRSGYLDQGRNLT----LSPREY-WVRGL------------ET 432
Cdd:PRK09840 310 ---------ATMRFEHDINDNTTLRNTTRWSRVkqdyLLTAIMGGASNITtptpSDVNTWtWSRTAntkdvsnkiltnQT 380
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 433 RFSQGFELGESRHEVGIGHRYVNEASHELRY----WTRA-----DSGQLPSTGSRNDRDTRGSTEANAFYIDDRIDIG-N 502
Cdd:PRK09840 381 NLTSTFYTGSIGHDVSTGVEFTRETQTNYGVnpvtLPAVnlyhpDSSIHPGGLTRNGANANGQTDTFAIYAFDTLQLTrD 460
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 503 WTITPGIRYEKIDSEQkNLLKNSKDSGRYNASLPA-----------------------LNVIYHLTPSWNLYANTE---- 555
Cdd:PRK09840 461 WELNGGIRLDNYHTEY-DSATACGGSGRGAITCPAgvakgspvttvdtaksgnlvnwkAGALYKLTENGNVYINYAvsqq 539
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 556 ---GSFGTVQYSQMGKAVRSGDIEPEKARTWELGSRYDDGILRAELGAFLINFD--NQYESNqQTDSVTARGKTRHKGIE 630
Cdd:PRK09840 540 ppgGSNFALAQSGSGNSANRTDFKPQKANTSEIGTKWQVLDKRLLLTAALFRTDieNEVEQN-DDGTYSQYGKKRVEGYE 618
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 631 AAIAYDLADldpllsGFDVYASYAYVDASIREdGPNKG----NQVPFSSKHKGTLganyrtgaWS-YNLDGSFQT---SQ 702
Cdd:PRK09840 619 LSVAGNITP------AWQVIAGYTQQKATVKN-GKDVAqdgsSSLPYTPEHAFTL--------WSqYQATDDLSVgggAR 683
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 703 YADNANTESESADGSTGRIAGWMVWSARGTYdfgpQLN-DLKLGLGVKNLFDRRYYTRSfddnNKGLY---VGQPRTLYV 778
Cdd:PRK09840 684 YIGSMHRGSDGAVGTPAFTEGYWVADAKLGY----RVNrNLDLQLNVYNLFDTDYVASI----NKSGYryhPGEPRTFLL 755
|
....*.
gi 489204697 779 QASVGF 784
Cdd:PRK09840 756 TANMHF 761
|
|
| TonB-Xanth-Caul |
TIGR01782 |
TonB-dependent receptor; This model represents a family of TonB-dependent outer-membrane ... |
461-784 |
3.57e-13 |
|
TonB-dependent receptor; This model represents a family of TonB-dependent outer-membrane receptors which are found mainly in Xanthomonas and Caulobacter. These appear to represent the expansion of a paralogous family in that the 22 X. axonopodis (21 in X. campestris) and 18 C. crescentus sequences are more closely related to each other than any of the many TonB-dependent receptors found in other species. In fact, the Crescentus and Xanthomonas sequences are inseparable on a phylogenetic tree using a PAM-weighted neighbor-joining method, indicating that one of the two genuses may have acquired this set of receptors from the other. The mechanism by which this family is shared between Xanthomonas, a gamma proteobacterial plant pathogen and Caulobacter, an alpha proteobacterial aquatic organism is unclear. [Transport and binding proteins, Porins]
Pssm-ID: 273804 [Multi-domain] Cd Length: 845 Bit Score: 73.52 E-value: 3.57e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 461 LRYWTRADSGQLPSTGSRNDRDTRgSTEAN-AFYIDDRIDIG-NWTITPGIRYEKIDSE------------QKNLLKNSK 526
Cdd:TIGR01782 479 NAARGDAAGGGTYTYASTAPNTYT-VTEDTtAAYAMANFDTGlRLRGNVGVRYERTDQTsdgwqsqpaangTGSVLVPVS 557
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 527 DSGRYNASLPALNVIYHLTPSWNL------------YANTEGSFGTVQYSQMGKAVRSG---DIEPEKARTWELGSR-YD 590
Cdd:TIGR01782 558 ADRDYTDVLPSLNLAYDLTDDLVLrfaasktitrpdFGDLAANTSLSDDGTGGTVTVSGgnpDLKPYESDNLDLSLEwYF 637
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 591 DGILRAELGAFLINFDN---QYESNQQTDS----------VTAR---GKTRH-KGIEAAIAYDLADLDPLLSGFDVYASY 653
Cdd:TIGR01782 638 GPGGLLSAAVFYKDIKNfivTTTSTETNDGggglvvagvlVSRPvngGKAGKiRGVELGYQQTFDFLPGPLSGFGVQANY 717
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 654 AYVDAS--IREDGPnKGNQVPF--SSKHKGTLGANYRTGAW----SYNLDGSFQTSQYADNANTESESadgstgriagwm 725
Cdd:TIGR01782 718 TYVDSEadPSVDGV-QRRKLPLpgLSKNTANATLYYEKGGFsarlSYNYRSDYLLDVGGSNINRLDRY------------ 784
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 489204697 726 vWSARGTYDF--GPQLND-LKLGLGVKNLFDRRYYTRSFDDNNKGLYVGQPRTLYVQASVGF 784
Cdd:TIGR01782 785 -VDPRGQLDLsaSYQVSDhLSLGLQASNLTNEPSRWYTGGKQRPREYVETGRTYMLGLRYKF 845
|
|
| PRK13528 |
PRK13528 |
outer membrane receptor FepA; Provisional |
165-784 |
7.03e-13 |
|
outer membrane receptor FepA; Provisional
Pssm-ID: 237413 [Multi-domain] Cd Length: 727 Bit Score: 72.10 E-value: 7.03e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 165 EVLERIPGVSAPLNNGTGSHDLALNFGIRGLNPRlasRSTVLMDGIPVPfapygqpqlSLAPVSIG-------------- 230
Cdd:PRK13528 72 DIIRKMPGVNLTGNSASGTRGNNRQIDIRGMGPE---NTLILIDGVPVT---------SRNSVRYSwrgerdtrgdtnwv 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 231 ---NMDAVDVVRGGGAVRYGPQNVGGIVNFVTRAIPEDFATKLDVHSElSPSSSQDGLKTTHNVLIGGTGANGLGGALLY 307
Cdd:PRK13528 140 ppeMVERIEVIRGPAAARYGSGAAGGVVNIITKRPTNDWHGSLSLYTN-QPESSKEGATRRANFSLSGPLAGDALTMRLY 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 308 SG---TRGGDW-------------REHSDTRIDDLILKGRFQPSD----EHTFSAMTQYYDGeaDMPGGLGTA---AYHD 364
Cdd:PRK13528 219 GNlnkTDADSWdinssagtknaagREGVRNKDINGVLSWKMTPQQildfEAGYSRQGNIYAG--DTQNSNSSAvteSLAK 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 365 DPYQSTRPYDKFWG---------RRTLASASYEYTPNASQKLNVTGFFtktlrSGYLDQGRNLTLSPREYWVRG------ 429
Cdd:PRK13528 297 SGKETNRLYRQNYGlthngiwdwGQSRLGFYYEKTNNTRMNEGLAGGG-----EGRITADQTFTTSRLESYRTSgelnvp 371
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 430 LETRFSQGFELG-ESRHEVgighryVNEAShELRYWTraDSGQLPST-GSRNDRDTRGSTEANAFYIDDRIDIG-NWTIT 506
Cdd:PRK13528 372 LNWLFEQTLTVGaEWNRDE------LNDPS-STSLTV--KDGDIGGIsGSAADRSSKNKSEISALYVEDNIEPVpGTNLI 442
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 507 PGIRYEkidseqknllKNSKDSGRYNaslPALNVIYHLTPSW-------------NLYANTEGSFgtvqYSQMG----KA 569
Cdd:PRK13528 443 PGLRFD----------YHSEFGSNWS---PSLNLSQELGDYFkvkagiarafkapNLYQSSEGYL----LYSRGngcpKD 505
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 570 VRSG--------DIEPEKARTWELGSRYDDGILRAELGAFLINFDNQYESNQQTDSVTARG----------KTRHKGIEA 631
Cdd:PRK13528 506 ITSGgcylvgnkNLDPEISVNKEIGLEFTVDDYHASVTYFRNDYQNKIVAGDDVIGRTASGayilqwqnggKAVVEGLEG 585
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 632 AIAYDLADlDPLlsGFDVYASYAyvdasIREDGPNKGNqvPFSSKHKGTLGAN---YRTGAWSYNLD----GSFQTSQYA 704
Cdd:PRK13528 586 NLLVPLMK-DRL--NWNTNATYM-----ITSEQKDTGN--PLSVIPKYTINSTldwQITQALSANVNwtlyGKQKPRTHA 655
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 705 DNANTESESADGSTgrIAGWMVWSARGTYDFGpqlNDLKLGLGVKNLFDRRYYTrsfDDNNKGLYVGQPRTLYVQASVGF 784
Cdd:PRK13528 656 ESRSEETGGLSGKE--LGAYSLVGVNVNYDIN---KNLRLNVGVSNLFDKQIYR---EGEGANTYNEPGRAYYAGVTASF 727
|
|
| PRK14050 |
PRK14050 |
TonB-dependent siderophore receptor; |
89-756 |
1.83e-12 |
|
TonB-dependent siderophore receptor;
Pssm-ID: 237595 [Multi-domain] Cd Length: 728 Bit Score: 70.99 E-value: 1.83e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 89 ALAALLVgSGLeARARGDGAYTLEALPVE--DPANLQALTVVGDWLADASAA------DVFEHPGARDVVRREQFQAQGA 160
Cdd:PRK14050 19 ALAALVL-SGL-VAAQEGNTTQLETIVVEggNAASATATGPVDGYVAKATATgsktdtPITEIPQSVSVVGRQEMDDRGV 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 161 AS-TREVLERIPGV-SAPLNNgTGSHDLalnFGIRGLNprlASRSTVLMDGIPVpFApYGQPQLSLAPVSIgnmDAVDVV 238
Cdd:PRK14050 97 TNkVDEALRYTPGVlSQPFGT-DGDTDW---FYIRGFD---ATQTGVFLDGLNL-FS-YGFGGFQIDPFML---ERVEVL 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 239 RGGGAVRYGPQNVGGIVNFVTRAiPED---FATKLDVHS--------ELSPSSSQDGL---KTTHNVliggtganglgga 304
Cdd:PRK14050 165 KGPASVLYGGSNPGGIVNMVSKR-PLDeplYYTEIGINSygnaftgfDVGDKLSDDGTvryRVTGKV------------- 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 305 llysgtRGGDwrEHSDTRIDdliLKGRFQPS-----DEHT-------FSAMTQYYDGEADMP----------GGLGTAAY 362
Cdd:PRK14050 231 ------AGGD--NYSDYSED---LRGFIMPQityapDDATsltvygyLSGLDQVHVGNGFLPyvgtvvdapfGKIDRDAF 299
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 363 HDDPyqstrpyDKFWGRRTLASASYEYtpnaSQKLNVTGFFTKTLRSGYLDQ---------------GRNLTLSPREYWV 427
Cdd:PRK14050 300 YGEP-------DIDNGSYAQQMLGYEF----SHEFDNGWTFSQNARYGHLHKhekgpytygyvggatGLPDPTGPDYMLN 368
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 428 R------------GLETRFSQGFELGESRHEVGIGHRYvneashelRYWtRADsgQLPSTGSRNDRD----TRGSTE-AN 490
Cdd:PRK14050 369 RigfehrskvdsfSIDNRLEGEFDTGALTHNLLFGLDY--------KYY-RLD--QVQACCGATPISatnpVYGTTQgAN 437
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 491 AFYID-------------DRIDIGN-WTITPGIRYEKIDSEQKNLLKNSKDSGRYNASLPAlNVIYH----LTPswnlYA 552
Cdd:PRK14050 438 FVYLDqiltqqqigiyaqDQIRFGDgWLVTLNGRYDYVDTDSDARIGTSYESNDGALSGRA-GLAYEfdngLTP----YV 512
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 553 ntegSFGTVQYSQMGKAVRSGDIEPEKARTWELGSRYD----DGILRAELgaFLINFDNQYESNQQTDSVTARGKTRHKG 628
Cdd:PRK14050 513 ----SAATFFNPLVGTLASGPPLKPEEGEQYEAGIKYEpsfiDGLITASV--FQITKKNVTVTDPLTFASTQLGEVRSRG 586
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 629 IEAAIAYDLADldpllsGFDVYASYAYVDASIRED-GPNK-GNQVPFSSKHKGTLGANYR--TGAWS-YNLDGS--FQTS 701
Cdd:PRK14050 587 FELEGKVNLDD------NWKALASFTYTDLEITEDaNPSLiGNSPYLVPETQASLWLDYAvtDGAFEgVSLGAGvrYQGE 660
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|....*
gi 489204697 702 QYADNANTEsesadgstgRIAGWMVWSARGTYdfgpQLNDLKLGLGVKNLFDRRY 756
Cdd:PRK14050 661 SWADEANTL---------KVPAATLFDAAIRY----EKNDWGASLNVANLFDKEY 702
|
|
| PRK10064 |
PRK10064 |
catecholate siderophore receptor CirA; Provisional |
113-767 |
9.46e-12 |
|
catecholate siderophore receptor CirA; Provisional
Pssm-ID: 236646 [Multi-domain] Cd Length: 663 Bit Score: 68.37 E-value: 9.46e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 113 ALPVE-DPANLQALTVVgdwlADASAADVFEHPGARDVVRREQFQAQGAASTREVLERIPGVSAplnngTGSHDLALNFG 191
Cdd:PRK10064 20 AWPVLaVDDDGETMVVT----ASAVEQNLKDAPASISVITQEDLQRKPVQNLKDVLKEVPGVQL-----TNEGDNRKGVS 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 192 IRGLNprlASRSTVLMDGIPVPF--APYGQPQLSLAPVSIGNMDAVDVVRGGGAVRYGPQNVGGIVNFVTRAIPEDFATK 269
Cdd:PRK10064 91 IRGLD---SSYTLILIDGKRVNSrnAVFRHNDFDLNWIPVDAIERIEVVRGPMSSLYGSDALGGVVNIITKKIGQKWHGT 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 270 LDVHSELSPSS----SQDGLKTTHNVLIGGTGANGLGGALlysGTRGGDWREHSDT-------RID-----DLILKGRFQ 333
Cdd:PRK10064 168 VTVDTTIQEHRdrgdTYNGQFFTSGPLIDGVLGMKAYGSL---AKREKDDPQNSTTtdtgetpRIEgftsrDGNVEFAWT 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 334 PSDEHTFSAMTQYYDGEAD-------MPGGLGTAAYHDDPYQSTRPYDKFWGRRTLASASYEYTPNASQKLNVTGFFTKT 406
Cdd:PRK10064 245 PNQNHDFTAGYGFDRQDRDsdsldknRLERQNYSLSHNGRWDYGNSELKYYGEKVENKNPGNSSPITSESNSIDGKYTLP 324
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 407 LrsGYLDQgrNLTLSpreywvrgletrfsqgfelGESRHEvgighryvneashelrywTRADSGQLPSTGSrndrdTRGS 486
Cdd:PRK10064 325 L--TAINQ--FLTFG-------------------GEWRHD------------------KLSDAVNLTGGTS-----SKTS 358
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 487 TEANAFYIDDRIDI-GNWTITPGIR------YEKIDSEQKNLLKNSKDS----GRYNASLPALNVIyHLTPSWnlyanTE 555
Cdd:PRK10064 359 ASQYALFVEDEWRIfEPLALTTGVRmddhetYGDHWSPRAYLVYNATDTvtvkGGWATAFKAPSLL-QLSPDW-----TS 432
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 556 GSFGTVQYsqmgkAVRSGDIEPEKARTWELGSRYD--DGILR---AELGAFLINFDNQYESNQQTDSVTARG-------- 622
Cdd:PRK10064 433 NSCRGACK-----IVGSPDLKPETSESWELGLYYMgeEGWLEgveSSVTVFRNDVDDRISISRTSDVNAAPGyqnfvgfe 507
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 623 -----------------KTRHKGIEAAIAYDLADldpllsGFDVYASYAYVDASIREDGPNKG-NQVPFSSKHkGTLG-A 683
Cdd:PRK10064 508 tngrgrrvpvfryynvnKARIQGVETELKIPFND------EWKLSLNYTYNDGRDVSNGENKPlSDLPFHTAN-GTLDwK 580
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 684 NYRTGAWSYNLDGSFQTSQYADnanteseSADGSTGriAGWMVWSARGTYdfgpQLN-DLKLGLGVKNLFDRRYYTRSFD 762
Cdd:PRK10064 581 PLALEDWSFYVSGNYTGQKRAD-------SATAKTP--GGYTIWNTGAAW----QVTkDVKLRAGVLNLGDKDLSRDDYS 647
|
....*
gi 489204697 763 DNNKG 767
Cdd:PRK10064 648 YNEDG 652
|
|
| PRK13483 |
PRK13483 |
ligand-gated channel protein; |
133-784 |
1.76e-11 |
|
ligand-gated channel protein;
Pssm-ID: 184080 [Multi-domain] Cd Length: 660 Bit Score: 67.49 E-value: 1.76e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 133 ADASAADVFEHPGARDVVRREQFQAQGAASTREVLERIPGVsaplnNGTGSHDLAlNFGIRGLNprlASRSTVLMDGI-- 210
Cdd:PRK13483 40 ASGYEQQIRDAPASISVITREDLENRFYRDLTDALLDVPGV-----VVTGGGDRT-DISLRGMG---SQYTLILVDGKrq 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 211 ------PVPFAPyGQPQLSLAPvsIGNMDAVDVVRGGGAVRYGPQNVGGIVNFVTRAIPEDFATKLDVHSELSPSSSQDG 284
Cdd:PRK13483 111 ssretrPNSDGP-GVEQAWTPP--LAAIERIEVIRGPMSSLYGSDAIGGVINIITRKVPNEWQGEVRLDTTLQENSDSGN 187
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 285 LKTThNVLIGGTGANGLGGALLYSGT--RGGDWREHS--DTRIDDLILKGRFQPSDEH--TFSA--MTQYYDGEadmpgg 356
Cdd:PRK13483 188 VYQA-NFFVNGPLIKDLLGLQLYGQYtqREEDDIEGGyrDKDARSLTAKLALTPNEDHdiMLEVgtSNQERDST------ 260
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 357 LGTAAYHDDPYQSTrpydkfwGRRTLASASYEYTPNASQKLNVTGFFTKTLRSGYLDQGRNLTLSpREYWVRGLETRFSQ 436
Cdd:PRK13483 261 VGKTVAPLAPGESC-------GRRGCPESSTTEYERSTVSLSHTGRWDFGTSDTYIQHEEFDNKS-REMKIKNTDFQSSL 332
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 437 GFELGESrHEVGIGHRYVNEashELRYWTradSGQLpstgsrNDRdTRGSTEANAFYIDDRIDIG-NWTITPGIRYEkid 515
Cdd:PRK13483 333 VAPLGQE-HTLTFGAAYNHQ---DLTDET---SNQI------SDL-TDISRTQWAVFSEDEWRIAdDFALTGGLRLD--- 395
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 516 seqknllknskDSGRYNASL-PALNVIYHLTPSWNLYANTEGSFGTVQYSQM----GKAVRSG------DIEPEKARTWE 584
Cdd:PRK13483 396 -----------HDENFGGHVsPRVYGVWNLAPSWTVKGGVSTGFRAPSLRQTtpdwGQVSRGGniygnpDLKPETSLNKE 464
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 585 LGSRYDDGI-LRAELGAFLINFD-----------------NQYESNQQTDSVTARGKTRhkGIEAAIAYdladldPLLSG 646
Cdd:PRK13483 465 LGLYYDLGSgLTASLTVFYNEFKdkitrvacpatqctdgpNQFGADPTTYVNIDEAVTQ--GVEASLSY------PITST 536
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 647 FDVYASYAYVDaSIREDGPNKG---NQVPfssKHKGTLGANYRTGAwsynldgsfQTSQYAdNANTESESADGSTGRIAG 723
Cdd:PRK13483 537 LSLSGNYTYTD-SEQKSGAYKGsplNQLP---KHLFQASLNWEPTD---------RLNSWA-RVNYRGEESQPTTGPSSS 602
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 489204697 724 WMVWSARGTYDFGP--QLND-LKLGLGVKNLFDRRYYTRSFDdnnkglYVGQPRTLYVQASVGF 784
Cdd:PRK13483 603 SFIAPSYTFLDLGAnyQLTDnLKLSAGIYNLFDKEINYEEYG------YVEDGRRYWLGMTYSF 660
|
|
| STN |
smart00965 |
Secretin and TonB N terminus short domain; This is a short domain found at the N-terminus of ... |
63-113 |
2.12e-10 |
|
Secretin and TonB N terminus short domain; This is a short domain found at the N-terminus of the Secretins of the bacterial type II/III secretory system as well as the TonB-dependent receptor proteins. These proteins are involved in TonB-dependent active uptake of selective substrates.
Pssm-ID: 198033 [Multi-domain] Cd Length: 52 Bit Score: 56.36 E-value: 2.12e-10
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 489204697 63 VLIAFSPEQTAARRSQALDGEYTLEEALAALLVGSGLEARARGDGAYTLEA 113
Cdd:smart00965 1 LNFVYDPALVAGRRVSLLLGNVTVEQALDRLLAGTGLTYRRIGGNTIVLSP 51
|
|
| PRK14049 |
PRK14049 |
ferrioxamine B receptor precursor protein; Provisional |
493-755 |
2.01e-09 |
|
ferrioxamine B receptor precursor protein; Provisional
Pssm-ID: 172541 [Multi-domain] Cd Length: 726 Bit Score: 61.07 E-value: 2.01e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 493 YIDDRIDIGNWTITPGIRYEKIDSEQKNLLKNSKDSGRYNASLPALnviyhltpSWNLYANTEGSFGTVQYSQ------- 565
Cdd:PRK14049 435 YLQDQIRYDAWTLTAGGRYDWVSTDTDTTDLATDSLTTVSQKDKEF--------SGRIGLTYETDFGLAPYISystafsp 506
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 566 ---MGKAVRSgDIEPEKARTWELGSRYDDGILRAELGAFLINFDNQ----YESNQQTDSVTA----RGKTRHKG--IEAA 632
Cdd:PRK14049 507 nagFNRATNQ-PFKPTESEQQEVGVKYLLPNSNTLITAALFNIDQTnglyYEVVFLAAGPTNiqvqRGKLRSRGfeLEAN 585
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 633 IAYDladldpllSGFDVYASYAYVDASIrEDGPN--KGNQVPFSSKHKGTLGANYR--TGAWSYNLD----GSFQTSQYA 704
Cdd:PRK14049 586 TSLD--------NGLSLIASYTYTDVKI-IQGPEgtIGNEVSSVPNHMASAWAHYTlpEGGPLYGLGlgagARFVGSSYG 656
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 489204697 705 DNANTESESADgstgriagwMVWSARGTYDFG---PQLNDLKLGLGVKNLFDRR 755
Cdd:PRK14049 657 NDQNTFKNSSR---------VLFDASVGYDFAaidKKYEGLMLQVNATNLFDRR 701
|
|
| PRK13484 |
PRK13484 |
IreA family TonB-dependent siderophore receptor; |
474-784 |
8.12e-09 |
|
IreA family TonB-dependent siderophore receptor;
Pssm-ID: 139605 [Multi-domain] Cd Length: 682 Bit Score: 59.25 E-value: 8.12e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 474 STGSRNDRDTRGSTEANAFYIDDRIDI-GNWTITPGIRyekidseqknlLKNSKDSGRY-NaslPALNVIYHLTPSWNLY 551
Cdd:PRK13484 369 ATGKKTTETQSVSIKQKAVFIENEYAAtDSLALTGGLR-----------LDNHEIYGSYwN---PRLYAVYNLTDNLTLK 434
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 552 ANTEGSF------------GTVqySQMGKAVRSG--DIEPEKARTWELGSRYDDGI-LRAELGAFLINFDNQYESNQ--Q 614
Cdd:PRK13484 435 GGIAKAFrapsirevspgfGTL--TQGGASIMYGnrDLKPETSVTEEIGIIYSNDSgFSASATLFNTDFKNKLTSYDigT 512
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 615 TDSVTAR--------GKTRHKGIEAAIAYDLADldpllsGFDVYASYAYVDASIREDGPN------KGNQVPFSSKHkgt 680
Cdd:PRK13484 513 KDPVTGLntfiydnvGEANIRGVELATQIPVYD------KWHVSANYTFTDSRRKSDDESlngkslKGEPLERTPRH--- 583
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 681 lGANYRTgAWSYNLDGSFQTSQYADNANTESESADGSTG-RI-AGWMVWSARGTYDFGPqlnDLKLGLGVKNLFDRRyyT 758
Cdd:PRK13484 584 -AANAKL-EWDYTQDITFYSSLNYTGKQIWAAQRNGAKVpRVrNGFTSMDIGLNYQILP---DTLINFAVLNVTDRK--S 656
|
330 340
....*....|....*....|....*.
gi 489204697 759 RSFDDNNKGLYVGQPRTLYVQASVGF 784
Cdd:PRK13484 657 EDIDTIDGNWQVDEGRRYWANVRVSF 682
|
|
| PRK10044 |
PRK10044 |
ferrichrome outer membrane transporter; Provisional |
487-784 |
2.36e-08 |
|
ferrichrome outer membrane transporter; Provisional
Pssm-ID: 236643 [Multi-domain] Cd Length: 727 Bit Score: 57.46 E-value: 2.36e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 487 TEANAFYIDDRIDIGNWTITPGIRYEKIDSEQKNLLKNSKDSGRYNASL--PALNVIYH--LTPswnlYANTEGSFGTVq 562
Cdd:PRK10044 442 QKQTGLYVQDQAEWDKWLVTLGGRYDWADQSSLNRVNGTTDKRDDKQFTwrGGVNYLFDngITP----YFSYSESFEPS- 516
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 563 ySQMGKavrSGDI-EPEKARTWELGSRY--DDGILRAELGAFLINFDNQYES--NQQTDSVTArGKTRHKGIE----AAI 633
Cdd:PRK10044 517 -SGTGK---DGNIfAPSKGKQYEAGVKYvpKDRPIVVTGAVYQLTKTNNLTAdpENSFFSVQG-GEIRARGVEleakAAL 591
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 634 AYDLadldpllsgfDVYASYAYVDASIREDGPNKGN---QVPfssKHKGTLGANY--RTGAWS---YNLDGSFQTSQYAD 705
Cdd:PRK10044 592 SANV----------NVTGSYTYTDAEYTTDTTYKGNtpaQVP---KHMASLWADYtfFDGPLSgltLGTGGRYTGSSYGD 658
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 706 NANTESesadgstgrIAGWMVWSARGTYD---FGpqLNDLKLGLGVKNLFDRRYYTRSFddNNKGLYVGQPRTLYVQASV 782
Cdd:PRK10044 659 PANSFK---------VGSYTVVDALVKYDlarFG--MAGSSVALNVNNLFDREYVASCF--NTYGCFWGAERQVVATATF 725
|
..
gi 489204697 783 GF 784
Cdd:PRK10044 726 RF 727
|
|
| PRK13524 |
PRK13524 |
FepA family TonB-dependent siderophore receptor; |
377-757 |
3.74e-08 |
|
FepA family TonB-dependent siderophore receptor;
Pssm-ID: 237410 [Multi-domain] Cd Length: 744 Bit Score: 56.96 E-value: 3.74e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 377 WGRRTLASASYEYTPNAsqKLN------VTGFFTKTLRSGYLDQGRNLTLS-----PREYWVrgletrfSQGFELG-ESR 444
Cdd:PRK13524 326 NGVSTSNYAQYEHTRNS--RLPeglaggTEGIFNEKATQFSTIDLDDVMLHsevnlPFDLLV-------NQTLTLGtEWN 396
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 445 HEvgighRYVNEASHELrywTRADSGQLPSTGSRNdRDTRGSTEANAFYIDDRIDIGN-WTITPGIRYEkidseqknllk 523
Cdd:PRK13524 397 QQ-----RMKDPSSNTQ---ALTSGGAIPGVSATG-RSPYSKAEIFSLFAEDNMELTDsTMLTPGLRFD----------- 456
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 524 NSKDSGRyNASlPALNVIYHLTPSW-------------NLYANTEG----SFGTVQYSQMGKAVR---SGDIEPEKARTW 583
Cdd:PRK13524 457 HHSIVGN-NWS-PSLNLSQGLGDDFtlkmgiaraykapNLYQTNPNyilySKGQGCYASAGNGCYlqgNDDLKAETSVNK 534
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 584 ELGSRYDDGILRAELGAFLINFDNQYESNQQTDSVTARGKTR-----------HKGIEAAIAYDLADldpllsGFDVYAS 652
Cdd:PRK13524 535 EIGLEFKRDGWLAGLTWFRNDYRNKIEAGYVPVGTNSVGKTDiyqwenvpkavVEGLEGTLNVPVSE------TVNWTNN 608
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 653 YAYVdasIREDgpNKGNQVPFSSKHKGTLGA--NYR-TGAWSYNLDGSFQTSQYADNANTESESADGS-TGRIAGWMVWS 728
Cdd:PRK13524 609 LTYM---LQSK--NKTTGDPLSIIPEYTLNStlSWQaTEDLSLQSTFTWYGKQKPKKYNYKGQPVTGSaTKEVSPYSIVG 683
|
410 420
....*....|....*....|....*....
gi 489204697 729 ARGTYDFGPQLNdlkLGLGVKNLFDRRYY 757
Cdd:PRK13524 684 LSATYDVTKNVS---LTGGVDNLFDKRLW 709
|
|
| btuB |
PRK10641 |
TonB-dependent vitamin B12 receptor BtuB; |
148-259 |
9.67e-07 |
|
TonB-dependent vitamin B12 receptor BtuB;
Pssm-ID: 236730 [Multi-domain] Cd Length: 614 Bit Score: 52.30 E-value: 9.67e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 148 DVVRREQFQAQGAASTREVLERIPGVSAPLNNGTGSHDlalNFGIRGLNprlASRSTVLMDGIPVPFAPY-GQPQLSLAP 226
Cdd:PRK10641 47 TVVTRDDIDRWQSKSVNDVLRRLPGVDIAQNGGLGQLS---SLFIRGTN---SSHVLVLIDGVRLNQAGIsGSADLSQIP 120
|
90 100 110
....*....|....*....|....*....|...
gi 489204697 227 VSIgnMDAVDVVRGGGAVRYGPQNVGGIVNFVT 259
Cdd:PRK10641 121 ISL--VQRIEYIRGPRSAVYGSDAIGGVVNIIT 151
|
|
| STN |
pfam07660 |
Secretin and TonB N terminus short domain; This is a short domain found at the N-terminus of ... |
65-113 |
3.92e-05 |
|
Secretin and TonB N terminus short domain; This is a short domain found at the N-terminus of the Secretins of the bacterial type II/III secretory system as well as the TonB-dependent receptor proteins. These proteins are involved in TonB-dependent active uptake of selective substrates.
Pssm-ID: 429580 [Multi-domain] Cd Length: 51 Bit Score: 41.73 E-value: 3.92e-05
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|
gi 489204697 65 IAFSPEQTAARRSQALD-GEYTLEEALAALLVGSGLEARaRGDGAYTLEA 113
Cdd:pfam07660 2 ILYDSDLVDGKQSVSLNvGNVTLEEALDQLLAGTGLSYE-IGGNTIVLRP 50
|
|
| PRK13513 |
PRK13513 |
ligand-gated channel protein; |
144-762 |
1.25e-03 |
|
ligand-gated channel protein;
Pssm-ID: 184104 [Multi-domain] Cd Length: 659 Bit Score: 42.45 E-value: 1.25e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 144 PGARDVVRREQFQAQGAASTREVLERIPGVsapLNNGTGSHDlalNFGIRGLNP----------RLASRSTVL-MDGipv 212
Cdd:PRK13513 53 PASISVVTREQLENKAYRDVTDALKDVPGV---VVTGGGSTS---DISIRGMAAkytlilvdgkRVDTRSTRPnSDG--- 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 213 pfapYGQPQLSLAPVSIgnMDAVDVVRGGGAVRYGPQNVGGIVNFVTRAIPEDFATKLDVHSELSPSS-SQDGLKT---T 288
Cdd:PRK13513 124 ----SGIEQGWLPPLAA--IERIEVVRGPMSSLYGSDAMGGVINIITRKVQKEWHGSLRADATLQEDSkSGDIFQTnayA 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 289 HNVLIGGTGANGLGGalLYSgTRGGDWRE--HSDTRIDDLILKGRFQPSDEHTFSAMTQYYDGEADMPGGLGTAAyhdDP 366
Cdd:PRK13513 198 SGPLIDGLLGLKVSG--LLS-HRSEDKIIdgYNEQRMRNGTATFSLTPDDNNEFDFEIGRYVQDRNSTPGRTLAL---NG 271
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 367 YQSTRPYDkfwgrRTlasaSYEYTPNAsqklnVTGFFTKTlrsGYL--DQGRNltlSPREywVRGLETRFSQG--FELGE 442
Cdd:PRK13513 272 TNSDTQYD-----RN----NYAITHNG-----YYDFGNST---SYIqrDETRN---PSRQ--MKSVDTIFNTQtsFLLDD 329
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 443 srHEVGIGHRYvneashelRYWTRADSG-QLPStGSRNDRDTRGSTeanAFYIDDRIDIGN-WTITPGIRYEkidseqkn 520
Cdd:PRK13513 330 --HTLSLGGQY--------RYEELYDKGnQLPS-ASDLNKLTRWSW---ALFAEDEWQMTNdFALTGGIRMD-------- 387
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 521 llknsKDSGRYNASLPALNVIYHLTPSWNL-------YANTEGSFGTVQYSQM-------GKAVRSGDIEPEKARTWELG 586
Cdd:PRK13513 388 -----QDQNYGTHWTPRLYGVWHLADQWTLkggvstgYRSPDLRQATDNWGQLtgggglpALILGNSDLKPEKSISQEIG 462
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 587 SRYDDGI-LRAELGAFLINF---------------DNQYESNQQT-DSVTAR---GKTRHKGIEAAIAYDLADldpllsG 646
Cdd:PRK13513 463 ILWDNQEnLNASVTLFNTDFkdkitevrncdttntDGQCVFNGINyDFISDRinvDKANMRGVEATFNWDINQ------A 536
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489204697 647 FDVYASYAYVDaSIREDGPNKG---NQVPfssKHKGTLGANYRT----GAWSynldgsfqtsqyadNANTESESADGStg 719
Cdd:PRK13513 537 WSLATNYTFTQ-SEQKSGAFAGqplNQMP---KHMANATLNWQTtedfATWI--------------RINYRGKTSEYL-- 596
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|.
gi 489204697 720 riagWMVWSARGT-----YDFGPQLN---DLKLGLGVKNLFDRRYYTRSFD 762
Cdd:PRK13513 597 ----NRTSMGSGTpsytfVDLGASYQltkELRLMGGVYNLLDKRVDIDVND 643
|
|
| |
