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Conserved domains on  [gi|489306253|ref|WP_003213691|]
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MULTISPECIES: hemolysin XhlA family protein [Bacillus]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
XhlA super family cl11371
Haemolysin XhlA; XhlA is a cell-surface associated haemolysin that lyses the two most ...
 15-74 2.69e-07

Haemolysin XhlA; XhlA is a cell-surface associated haemolysin that lyses the two most prevalent types of insect immune cells (granulocytes and plasmatocytes) as well as rabbit and horse erythrocytes. This family has had DUF1267, pfam06895, merged into it.


The actual alignment was detected with superfamily member pfam10779:

Pssm-ID: 402419 [Multi-domain]  Cd Length: 67  Bit Score: 43.42  E-value: 2.69e-07
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 489306253  15 DIREWLVRIDTKVDffnDVKTKADQADEKADEALALAKENRADILDMRANTKWVWGVMLT 74
Cdd:pfam10779  1 EIKERLARIETKLD---NLEERVDKLERKAAEAETKIKNLCEDLKKIESNQKWLIRTIIG 57
 
Name Accession Description Interval E-value
XhlA pfam10779
Haemolysin XhlA; XhlA is a cell-surface associated haemolysin that lyses the two most ...
 15-74 2.69e-07

Haemolysin XhlA; XhlA is a cell-surface associated haemolysin that lyses the two most prevalent types of insect immune cells (granulocytes and plasmatocytes) as well as rabbit and horse erythrocytes. This family has had DUF1267, pfam06895, merged into it.


Pssm-ID: 402419 [Multi-domain]  Cd Length: 67  Bit Score: 43.42  E-value: 2.69e-07
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 489306253  15 DIREWLVRIDTKVDffnDVKTKADQADEKADEALALAKENRADILDMRANTKWVWGVMLT 74
Cdd:pfam10779  1 EIKERLARIETKLD---NLEERVDKLERKAAEAETKIKNLCEDLKKIESNQKWLIRTIIG 57
 
Name Accession Description Interval E-value
XhlA pfam10779
Haemolysin XhlA; XhlA is a cell-surface associated haemolysin that lyses the two most ...
 15-74 2.69e-07

Haemolysin XhlA; XhlA is a cell-surface associated haemolysin that lyses the two most prevalent types of insect immune cells (granulocytes and plasmatocytes) as well as rabbit and horse erythrocytes. This family has had DUF1267, pfam06895, merged into it.


Pssm-ID: 402419 [Multi-domain]  Cd Length: 67  Bit Score: 43.42  E-value: 2.69e-07
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 489306253  15 DIREWLVRIDTKVDffnDVKTKADQADEKADEALALAKENRADILDMRANTKWVWGVMLT 74
Cdd:pfam10779  1 EIKERLARIETKLD---NLEERVDKLERKAAEAETKIKNLCEDLKKIESNQKWLIRTIIG 57
DUF1798 pfam08807
Bacterial domain of unknown function (DUF1798); This domain is found in many hypothetical ...
 8-53 9.08e-03

Bacterial domain of unknown function (DUF1798); This domain is found in many hypothetical proteins. The structure of one of the proteins in this family has been solved and it adopts an all alpha helical fold.


Pssm-ID: 400936  Cd Length: 108  Bit Score: 32.62  E-value: 9.08e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*.
gi 489306253    8 ELNEKISDIREWLVRIDTKVDFFNDVKTKADQADEKADEALALAKE 53
Cdd:pfam08807   6 QYNEEAEERYQEVKEEGKEPDFFQDVKPFVDEVDQLLDEWKELALE 51
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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