MULTISPECIES: uberolysin/carnocyclin family circular bacteriocin [Bacillus]
Protein Classification
uberolysin/carnocyclin family circular bacteriocin( domain architecture ID 10022736)
uberolysin/carnocyclin family circular bacteriocin similar to Streptococcus uberis bacteriocin uberolysin, a cyclopeptide antibiotic with bacteriolytic activity against most streptococci
List of domain hits
| Name | Accession | Description | Interval | E-value | ||
| circ_ocin_uber | TIGR03651 | circular bacteriocin, circularin A/uberolysin family; Circular bacteriocins are antibiotic ... |
31-84 | 4.58e-06 | ||
circular bacteriocin, circularin A/uberolysin family; Circular bacteriocins are antibiotic proteins made by ribosomal translation of a precursor molecular, followed by cleavage and circularization. Members of this subclass of the circular bacteriocins include circularin A from Clostridium beijerinckii, bacteriocin AS-48 from Enterococcus faecalis, uberolysin from Streptococcus uberis, and carnocyclin A from Carnobacterium maltaromaticum. The mature circularized peptides average about 70 amino acids in size. [Cellular processes, Toxin production and resistance] : Pssm-ID: 274700 Cd Length: 73 Bit Score: 40.55 E-value: 4.58e-06
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| Name | Accession | Description | Interval | E-value | ||
| circ_ocin_uber | TIGR03651 | circular bacteriocin, circularin A/uberolysin family; Circular bacteriocins are antibiotic ... |
31-84 | 4.58e-06 | ||
circular bacteriocin, circularin A/uberolysin family; Circular bacteriocins are antibiotic proteins made by ribosomal translation of a precursor molecular, followed by cleavage and circularization. Members of this subclass of the circular bacteriocins include circularin A from Clostridium beijerinckii, bacteriocin AS-48 from Enterococcus faecalis, uberolysin from Streptococcus uberis, and carnocyclin A from Carnobacterium maltaromaticum. The mature circularized peptides average about 70 amino acids in size. [Cellular processes, Toxin production and resistance] Pssm-ID: 274700 Cd Length: 73 Bit Score: 40.55 E-value: 4.58e-06
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| Bacteriocin_IId | pfam09221 | Bacteriocin class IId cyclical uberolysin-like; Members of this family are ... |
34-83 | 3.47e-05 | ||
Bacteriocin class IId cyclical uberolysin-like; Members of this family are membrane-interacting peptides, produced by Firmicutes that display a broad anti-microbial spectrum against Gram-positive and Gram-negative bacteria. They adopt a helical structure, with four or five alpha helices forming a Saposin-like fold. The structure has been found to be cyclical. It should be pointed out that one reference implies that both circularin A and gassericin A are class V or IIc-type bacteriocins; however we find that these two proteins fall into different Pfam families families, this one and BacteriocIIc_cy, pfam12173. Pssm-ID: 401240 Cd Length: 67 Bit Score: 38.22 E-value: 3.47e-05
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| Name | Accession | Description | Interval | E-value | ||
| circ_ocin_uber | TIGR03651 | circular bacteriocin, circularin A/uberolysin family; Circular bacteriocins are antibiotic ... |
31-84 | 4.58e-06 | ||
circular bacteriocin, circularin A/uberolysin family; Circular bacteriocins are antibiotic proteins made by ribosomal translation of a precursor molecular, followed by cleavage and circularization. Members of this subclass of the circular bacteriocins include circularin A from Clostridium beijerinckii, bacteriocin AS-48 from Enterococcus faecalis, uberolysin from Streptococcus uberis, and carnocyclin A from Carnobacterium maltaromaticum. The mature circularized peptides average about 70 amino acids in size. [Cellular processes, Toxin production and resistance] Pssm-ID: 274700 Cd Length: 73 Bit Score: 40.55 E-value: 4.58e-06
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| Bacteriocin_IId | pfam09221 | Bacteriocin class IId cyclical uberolysin-like; Members of this family are ... |
34-83 | 3.47e-05 | ||
Bacteriocin class IId cyclical uberolysin-like; Members of this family are membrane-interacting peptides, produced by Firmicutes that display a broad anti-microbial spectrum against Gram-positive and Gram-negative bacteria. They adopt a helical structure, with four or five alpha helices forming a Saposin-like fold. The structure has been found to be cyclical. It should be pointed out that one reference implies that both circularin A and gassericin A are class V or IIc-type bacteriocins; however we find that these two proteins fall into different Pfam families families, this one and BacteriocIIc_cy, pfam12173. Pssm-ID: 401240 Cd Length: 67 Bit Score: 38.22 E-value: 3.47e-05
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