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Conserved domains on  [gi|489402353|ref|WP_003308715|]
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pentapeptide repeat-containing protein [Bacillus thuringiensis]

Protein Classification

pentapeptide repeat-containing protein( domain architecture ID 11442852)

pentapeptide repeat-containing protein (PRP) adopts a beta-helical structure and may have a targeting or structural function

CATH:  2.160.20.10
PubMed:  33925937|9655353

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
YjbI COG1357
Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];
81-222 9.81e-30

Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];


:

Pssm-ID: 440968 [Multi-domain]  Cd Length: 178  Bit Score: 108.88  E-value: 9.81e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489402353  81 EAILQKANYIDILDIHKFIKNNGKNLDLEAGNFQGALLEGADLREANLSNCSFKGANL--------KLANFKNANLEGAN 152
Cdd:COG1357   19 GADLSGANLSGALSGANLSGANLSGANLTGANLSGADLSGADLSGANLSGADLSGANLtgadlsgaNLANLSGANLSGAN 98

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489402353 153 LEGANLIEANLFGANLKNTDLRRANLTLSELRKTKLDGTSLRGAELWSSSIWGVDFSKAFTEGVDLSRAD 222
Cdd:COG1357   99 LSGANLRGANLSGANLSGADLSGADLSGANLSGADLSGANLSGANLSGADLSGADLSGANLSGANLSGAN 168
 
Name Accession Description Interval E-value
YjbI COG1357
Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];
81-222 9.81e-30

Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];


Pssm-ID: 440968 [Multi-domain]  Cd Length: 178  Bit Score: 108.88  E-value: 9.81e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489402353  81 EAILQKANYIDILDIHKFIKNNGKNLDLEAGNFQGALLEGADLREANLSNCSFKGANL--------KLANFKNANLEGAN 152
Cdd:COG1357   19 GADLSGANLSGALSGANLSGANLSGANLTGANLSGADLSGADLSGANLSGADLSGANLtgadlsgaNLANLSGANLSGAN 98

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489402353 153 LEGANLIEANLFGANLKNTDLRRANLTLSELRKTKLDGTSLRGAELWSSSIWGVDFSKAFTEGVDLSRAD 222
Cdd:COG1357   99 LSGANLRGANLSGANLSGADLSGADLSGANLSGADLSGANLSGANLSGADLSGADLSGANLSGANLSGAN 168
PRK15196 PRK15196
type III secretion system effector PipB2;
107-226 1.20e-15

type III secretion system effector PipB2;


Pssm-ID: 185118 [Multi-domain]  Cd Length: 350  Bit Score: 74.66  E-value: 1.20e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489402353 107 DLEAGNFQGALLEGADLREANLSNCSFK-----GANLKLANFKNANLEGANLEGANLIEANLFGANLKNTDLRRANLTLS 181
Cdd:PRK15196 188 DCEGANFKGANLSGTSLGDSNFKNACLEdsimcGATLDHANLTGANLQHASLLGCSMIECNCSGANMDHTNLSGATLIRA 267

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|
gi 489402353 182 ELRKTKLDGTS-----LRGAELWSSSIWGVDFSKAFTEGVDLSRADNRGS 226
Cdd:PRK15196 268 DMSGATLQGATimaaiMEGAVLTRANLRKASFISTNLDGADLAEANLNNT 317
Pentapeptide pfam00805
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ...
 141-179 6.65e-11

Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.


Pssm-ID: 459943 [Multi-domain]  Cd Length: 40  Bit Score: 55.42  E-value: 6.65e-11
                          10        20        30
                  ....*....|....*....|....*....|....*....
gi 489402353  141 ANFKNANLEGANLEGANLIEANLFGANLKNTDLRRANLT 179
Cdd:pfam00805   1 ANLSGANLSGANLSGANLSGANLTGANLSGADLSGANLS 39
 
Name Accession Description Interval E-value
YjbI COG1357
Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];
81-222 9.81e-30

Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];


Pssm-ID: 440968 [Multi-domain]  Cd Length: 178  Bit Score: 108.88  E-value: 9.81e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489402353  81 EAILQKANYIDILDIHKFIKNNGKNLDLEAGNFQGALLEGADLREANLSNCSFKGANL--------KLANFKNANLEGAN 152
Cdd:COG1357   19 GADLSGANLSGALSGANLSGANLSGANLTGANLSGADLSGADLSGANLSGADLSGANLtgadlsgaNLANLSGANLSGAN 98

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489402353 153 LEGANLIEANLFGANLKNTDLRRANLTLSELRKTKLDGTSLRGAELWSSSIWGVDFSKAFTEGVDLSRAD 222
Cdd:COG1357   99 LSGANLRGANLSGANLSGADLSGADLSGANLSGADLSGANLSGANLSGADLSGADLSGANLSGANLSGAN 168
YjbI COG1357
Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];
104-222 3.74e-26

Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];


Pssm-ID: 440968 [Multi-domain]  Cd Length: 178  Bit Score: 99.63  E-value: 3.74e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489402353 104 KNLDLEAGNFQGALLEGADLREANLS----NCSFKGANLKLANFKNANLEGANLEGANLIEANLFGANLKNTDLRRANLT 179
Cdd:COG1357    3 SGADLSGADLSGADLSGADLSGANLSgalsGANLSGANLSGANLTGANLSGADLSGADLSGANLSGADLSGANLTGADLS 82

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*.
gi 489402353 180 ---LSELRKTKLDGTSLRGAELWSSSIWGVDFSKAFTEGVDLSRAD 222
Cdd:COG1357   83 ganLANLSGANLSGANLSGANLRGANLSGANLSGADLSGADLSGAN 128
YjbI COG1357
Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];
105-225 2.17e-24

Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];


Pssm-ID: 440968 [Multi-domain]  Cd Length: 178  Bit Score: 95.01  E-value: 2.17e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489402353 105 NLDLEAGNFQGAL----LEGADLREANLSNCSFKGANLKLANFKNANLEGANLEGANLIEANLFGANL---KNTDLRRAN 177
Cdd:COG1357   19 GADLSGANLSGALsganLSGANLSGANLTGANLSGADLSGADLSGANLSGADLSGANLTGADLSGANLanlSGANLSGAN 98

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*...
gi 489402353 178 LTLSELRKTKLDGTSLRGAELWSSSIWGVDFSKAFTEGVDLSRADNRG 225
Cdd:COG1357   99 LSGANLRGANLSGANLSGADLSGADLSGANLSGADLSGANLSGANLSG 146
YjbI COG1357
Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];
112-193 1.59e-23

Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];


Pssm-ID: 440968 [Multi-domain]  Cd Length: 178  Bit Score: 92.70  E-value: 1.59e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489402353 112 NFQGALLEGADLREANLSNCSFKGANLKLANFKNANLEGANLEGANLIEANLFGANLKNTDLRRANLTLSELRKTKLDGT 191
Cdd:COG1357   88 NLSGANLSGANLSGANLRGANLSGANLSGADLSGADLSGANLSGADLSGANLSGANLSGADLSGADLSGANLSGANLSGA 167


                 ..
gi 489402353 192 SL 193
Cdd:COG1357  168 NL 169
YjbI COG1357
Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];
104-198 1.13e-22

Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];


Pssm-ID: 440968 [Multi-domain]  Cd Length: 178  Bit Score: 90.39  E-value: 1.13e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489402353 104 KNLDLEAGNFQGA---LLEGADLREANLSNCSFKGANLKLANFKNANLEGANLEGANLIEANLFGANLKNTDLRRANLTL 180
Cdd:COG1357   72 SGANLTGADLSGAnlaNLSGANLSGANLSGANLRGANLSGANLSGADLSGADLSGANLSGADLSGANLSGANLSGADLSG 151

                         90
                 ....*....|....*...
gi 489402353 181 SELRKTKLDGTSLRGAEL 198
Cdd:COG1357  152 ADLSGANLSGANLSGANL 169
YjbI COG1357
Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];
107-179 2.13e-19

Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];


Pssm-ID: 440968 [Multi-domain]  Cd Length: 178  Bit Score: 81.91  E-value: 2.13e-19
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 489402353 107 DLEAGNFQGALLEGADLREANLSNCSFKGANLKLANFKNANLEGANLEGANLIEANLFGANLKNTDLRRANLT 179
Cdd:COG1357   98 NLSGANLRGANLSGANLSGADLSGADLSGANLSGADLSGANLSGANLSGADLSGADLSGANLSGANLSGANLA 170
PRK15196 PRK15196
type III secretion system effector PipB2;
107-226 1.20e-15

type III secretion system effector PipB2;


Pssm-ID: 185118 [Multi-domain]  Cd Length: 350  Bit Score: 74.66  E-value: 1.20e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489402353 107 DLEAGNFQGALLEGADLREANLSNCSFK-----GANLKLANFKNANLEGANLEGANLIEANLFGANLKNTDLRRANLTLS 181
Cdd:PRK15196 188 DCEGANFKGANLSGTSLGDSNFKNACLEdsimcGATLDHANLTGANLQHASLLGCSMIECNCSGANMDHTNLSGATLIRA 267

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|
gi 489402353 182 ELRKTKLDGTS-----LRGAELWSSSIWGVDFSKAFTEGVDLSRADNRGS 226
Cdd:PRK15196 268 DMSGATLQGATimaaiMEGAVLTRANLRKASFISTNLDGADLAEANLNNT 317
PRK15196 PRK15196
type III secretion system effector PipB2;
78-222 2.70e-14

type III secretion system effector PipB2;


Pssm-ID: 185118 [Multi-domain]  Cd Length: 350  Bit Score: 70.81  E-value: 2.70e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489402353  78 NDKEAILQKANyidildihkFIKNNGKNLDLEAGNFQGALLEGADLREANLSNCSFKGANLKLANFKNANLEGANLEGAN 157
Cdd:PRK15196 153 NLKGAVLTGAN---------LTAENLCDADLSGANLEGAVLFMADCEGANFKGANLSGTSLGDSNFKNACLEDSIMCGAT 223

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489402353 158 LIEANLFGANLKNTDLR-----RANLTLSELRKTKLDGTSLRGAELWSSSIWGVDFSKAFTEGVDLSRAD 222
Cdd:PRK15196 224 LDHANLTGANLQHASLLgcsmiECNCSGANMDHTNLSGATLIRADMSGATLQGATIMAAIMEGAVLTRAN 293
PRK15196 PRK15196
type III secretion system effector PipB2;
112-226 3.85e-12

type III secretion system effector PipB2;


Pssm-ID: 185118 [Multi-domain]  Cd Length: 350  Bit Score: 64.64  E-value: 3.85e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489402353 112 NFQGALLEGADLREANLSNCSFKGANLK-----LANFKNANLEGANLEGANLIEANLFGANLKNTDLRRANLTLSELRKT 186
Cdd:PRK15196 153 NLKGAVLTGANLTAENLCDADLSGANLEgavlfMADCEGANFKGANLSGTSLGDSNFKNACLEDSIMCGATLDHANLTGA 232

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|
gi 489402353 187 KLDGTSLRGAELWSSSIWGVDFSKAFTEGVDLSRADNRGS 226
Cdd:PRK15196 233 NLQHASLLGCSMIECNCSGANMDHTNLSGATLIRADMSGA 272
PRK15197 PRK15197
type III secretion system effector PipB;
106-226 1.37e-11

type III secretion system effector PipB;


Pssm-ID: 185119 [Multi-domain]  Cd Length: 291  Bit Score: 62.64  E-value: 1.37e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489402353 106 LDLEAGNFQGALLEGADLREANLSNCSFKGANLKLANFKNANLEGANLEGANLIEANLFGANLKNTDLRRANLTlselrK 185
Cdd:PRK15197 154 LNLRGVNLAHKDFQGEDLSDIDASNADFRETTLSNVNLVGANLCCANLHAVNLMGSNMTKANLTHADLTCANMS-----G 228

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|..
gi 489402353 186 TKLDGTSLRGAELWSSSIWGVDFSK-AFTEGVDLSRADNRGS 226
Cdd:PRK15197 229 VNLTAAILFGSDLTDTKLNGAKLDKiALTLAKALTGADLTGS 270
PRK15197 PRK15197
type III secretion system effector PipB;
102-211 2.23e-11

type III secretion system effector PipB;


Pssm-ID: 185119 [Multi-domain]  Cd Length: 291  Bit Score: 61.87  E-value: 2.23e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489402353 102 NGKNLDLEAGNFQGALLE-----GADLREANLSNCSFKGANLKLANFKNANLEGANLEGANLIEANLFGANLKNTDLRRA 176
Cdd:PRK15197 155 NLRGVNLAHKDFQGEDLSdidasNADFRETTLSNVNLVGANLCCANLHAVNLMGSNMTKANLTHADLTCANMSGVNLTAA 234

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 489402353 177 NLTLSELRKTKLDGTSLRGAEL-WSSSIWGVDFSKA 211
Cdd:PRK15197 235 ILFGSDLTDTKLNGAKLDKIALtLAKALTGADLTGS 270
PRK15196 PRK15196
type III secretion system effector PipB2;
101-208 2.98e-11

type III secretion system effector PipB2;


Pssm-ID: 185118 [Multi-domain]  Cd Length: 350  Bit Score: 61.95  E-value: 2.98e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489402353 101 NNGKNLDLEAGNFQGALLE-----GADLREANLSNCSFKGANLKLANFKNANLEGANLEGANLIEANLFGANLKNTDLRR 175
Cdd:PRK15196 207 SNFKNACLEDSIMCGATLDhanltGANLQHASLLGCSMIECNCSGANMDHTNLSGATLIRADMSGATLQGATIMAAIMEG 286

                         90       100       110
                 ....*....|....*....|....*....|...
gi 489402353 176 ANLTLSELRKTKLDGTSLRGAELWSSSIWGVDF 208
Cdd:PRK15196 287 AVLTRANLRKASFISTNLDGADLAEANLNNTCF 319
YjbI COG1357
Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];
142-222 4.84e-11

Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];


Pssm-ID: 440968 [Multi-domain]  Cd Length: 178  Bit Score: 59.57  E-value: 4.84e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489402353 142 NFKNANLEGANLEGANLIEANLFGANL----KNTDLRRANLTLSELRKTKLDGTSLRGAELWSSSIWGVDFSKAFTEGVD 217
Cdd:COG1357    1 DLSGADLSGADLSGADLSGADLSGANLsgalSGANLSGANLSGANLTGANLSGADLSGADLSGANLSGADLSGANLTGAD 80


                 ....*
gi 489402353 218 LSRAD 222
Cdd:COG1357   81 LSGAN 85
Pentapeptide pfam00805
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ...
 141-179 6.65e-11

Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.


Pssm-ID: 459943 [Multi-domain]  Cd Length: 40  Bit Score: 55.42  E-value: 6.65e-11
                          10        20        30
                  ....*....|....*....|....*....|....*....
gi 489402353  141 ANFKNANLEGANLEGANLIEANLFGANLKNTDLRRANLT 179
Cdd:pfam00805   1 ANLSGANLSGANLSGANLSGANLTGANLSGADLSGANLS 39
PRK15196 PRK15196
type III secretion system effector PipB2;
108-219 8.79e-11

type III secretion system effector PipB2;


Pssm-ID: 185118 [Multi-domain]  Cd Length: 350  Bit Score: 60.41  E-value: 8.79e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489402353 108 LEAGNFQGALLEGADLREANLSNCSFKGANLKLANFKNANLEGANLEGANLIEANLFGANLKNTDLRRANLTLSELRKTK 187
Cdd:PRK15196 224 LDHANLTGANLQHASLLGCSMIECNCSGANMDHTNLSGATLIRADMSGATLQGATIMAAIMEGAVLTRANLRKASFISTN 303

                         90       100       110
                 ....*....|....*....|....*....|..
gi 489402353 188 LDGTSLRGAELWSSSIWGVDFSKAFTEGVDLS 219
Cdd:PRK15196 304 LDGADLAEANLNNTCFKDCTLTHLRTEDATMS 335
Pentapeptide pfam00805
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ...
 136-175 1.72e-10

Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.


Pssm-ID: 459943 [Multi-domain]  Cd Length: 40  Bit Score: 54.27  E-value: 1.72e-10
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|
gi 489402353  136 ANLKLANFKNANLEGANLEGANLIEANLFGANLKNTDLRR 175
Cdd:pfam00805   1 ANLSGANLSGANLSGANLSGANLTGANLSGADLSGANLSG 40
Pentapeptide pfam00805
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ...
 121-158 4.85e-10

Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.


Pssm-ID: 459943 [Multi-domain]  Cd Length: 40  Bit Score: 53.11  E-value: 4.85e-10
                          10        20        30
                  ....*....|....*....|....*....|....*...
gi 489402353  121 ADLREANLSNCSFKGANLKLANFKNANLEGANLEGANL 158
Cdd:pfam00805   1 ANLSGANLSGANLSGANLSGANLTGANLSGADLSGANL 38
Pentapeptide pfam00805
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ...
 116-155 3.37e-09

Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.


Pssm-ID: 459943 [Multi-domain]  Cd Length: 40  Bit Score: 50.80  E-value: 3.37e-09
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|
gi 489402353  116 ALLEGADLREANLSNCSFKGANLKLANFKNANLEGANLEG 155
Cdd:pfam00805   1 ANLSGANLSGANLSGANLSGANLTGANLSGADLSGANLSG 40
Pentapeptide pfam00805
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ...
 126-163 3.84e-09

Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.


Pssm-ID: 459943 [Multi-domain]  Cd Length: 40  Bit Score: 50.80  E-value: 3.84e-09
                          10        20        30
                  ....*....|....*....|....*....|....*...
gi 489402353  126 ANLSNCSFKGANLKLANFKNANLEGANLEGANLIEANL 163
Cdd:pfam00805   1 ANLSGANLSGANLSGANLSGANLTGANLSGADLSGANL 38
Pentapeptide_4 pfam13599
Pentapeptide repeats (9 copies);
126-198 9.48e-09

Pentapeptide repeats (9 copies);


Pssm-ID: 433339 [Multi-domain]  Cd Length: 78  Bit Score: 50.74  E-value: 9.48e-09
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 489402353  126 ANLSNCSFKGANLKLANFKNANLEGANLEGANLIEANLFGANLKNTD-----LRRANLTLSELRKTKLDGTSLRGAEL 198
Cdd:pfam13599   1 ADFTRCSFEGCKLSGTEFYHATLKDCNFTECNLVNVNFDDCNLRDVDfleaqLKNAQFSGCNLKNSNFSDVKLKGADF 78
Pentapeptide pfam00805
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ...
 112-150 1.87e-08

Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.


Pssm-ID: 459943 [Multi-domain]  Cd Length: 40  Bit Score: 48.88  E-value: 1.87e-08
                          10        20        30
                  ....*....|....*....|....*....|....*....
gi 489402353  112 NFQGALLEGADLREANLSNCSFKGANLKLANFKNANLEG 150
Cdd:pfam00805   2 NLSGANLSGANLSGANLSGANLTGANLSGADLSGANLSG 40
PRK15196 PRK15196
type III secretion system effector PipB2;
99-184 2.55e-08

type III secretion system effector PipB2;


Pssm-ID: 185118 [Multi-domain]  Cd Length: 350  Bit Score: 53.47  E-value: 2.55e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489402353  99 IKNNGKNLDLEAGNFQGALLEGADLREANLSNCSFKGANLKLANFKNANLEGANLEGANLIEANLFGANLKNTDLRraNL 178
Cdd:PRK15196 245 IECNCSGANMDHTNLSGATLIRADMSGATLQGATIMAAIMEGAVLTRANLRKASFISTNLDGADLAEANLNNTCFK--DC 322


                 ....*.
gi 489402353 179 TLSELR 184
Cdd:PRK15196 323 TLTHLR 328
Pentapeptide pfam00805
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ...
 131-170 2.59e-08

Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.


Pssm-ID: 459943 [Multi-domain]  Cd Length: 40  Bit Score: 48.49  E-value: 2.59e-08
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|
gi 489402353  131 CSFKGANLKLANFKNANLEGANLEGANLIEANLFGANLKN 170
Cdd:pfam00805   1 ANLSGANLSGANLSGANLSGANLTGANLSGADLSGANLSG 40
Pentapeptide pfam00805
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ...
 146-184 8.83e-08

Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.


Pssm-ID: 459943 [Multi-domain]  Cd Length: 40  Bit Score: 46.95  E-value: 8.83e-08
                          10        20        30
                  ....*....|....*....|....*....|....*....
gi 489402353  146 ANLEGANLEGANLIEANLFGANLKNTDLRRANLTLSELR 184
Cdd:pfam00805   1 ANLSGANLSGANLSGANLSGANLTGANLSGADLSGANLS 39
PRK15196 PRK15196
type III secretion system effector PipB2;
112-216 1.12e-07

type III secretion system effector PipB2;


Pssm-ID: 185118 [Multi-domain]  Cd Length: 350  Bit Score: 51.55  E-value: 1.12e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489402353 112 NFQGALLEGADLREANLSNCSFKGANLKLANFKNANLEGANLEGANLIEANLFGANLKNTDLRRANLTLSELRKTKLdgT 191
Cdd:PRK15196 248 NCSGANMDHTNLSGATLIRADMSGATLQGATIMAAIMEGAVLTRANLRKASFISTNLDGADLAEANLNNTCFKDCTL--T 325

                         90       100
                 ....*....|....*....|....*
gi 489402353 192 SLRGAELWSSSIWGVDFSKAFTEGV 216
Cdd:PRK15196 326 HLRTEDATMSTSTQTLFNEFYSENI 350
Pentapeptide pfam00805
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ...
 156-195 2.15e-07

Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.


Pssm-ID: 459943 [Multi-domain]  Cd Length: 40  Bit Score: 45.79  E-value: 2.15e-07
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|
gi 489402353  156 ANLIEANLFGANLKNTDLRRANLTLSELRKTKLDGTSLRG 195
Cdd:pfam00805   1 ANLSGANLSGANLSGANLSGANLTGANLSGADLSGANLSG 40
PRK15197 PRK15197
type III secretion system effector PipB;
98-197 1.16e-06

type III secretion system effector PipB;


Pssm-ID: 185119 [Multi-domain]  Cd Length: 291  Bit Score: 48.00  E-value: 1.16e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489402353  98 FIKNNGKNLDLEAGNFQGALLEGADLREANLSNCSFKGANLKLANFKNANLEGANLEGANLIEANLFGANLKntdlrRAN 177
Cdd:PRK15197 181 FRETTLSNVNLVGANLCCANLHAVNLMGSNMTKANLTHADLTCANMSGVNLTAAILFGSDLTDTKLNGAKLD-----KIA 255

                         90       100
                 ....*....|....*....|
gi 489402353 178 LTLSElrktKLDGTSLRGAE 197
Cdd:PRK15197 256 LTLAK----ALTGADLTGSQ 271
Pentapeptide pfam00805
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ...
 107-145 1.32e-06

Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.


Pssm-ID: 459943 [Multi-domain]  Cd Length: 40  Bit Score: 43.87  E-value: 1.32e-06
                          10        20        30
                  ....*....|....*....|....*....|....*....
gi 489402353  107 DLEAGNFQGALLEGADLREANLSNCSFKGANLKLANFKN 145
Cdd:pfam00805   2 NLSGANLSGANLSGANLSGANLTGANLSGADLSGANLSG 40
PRK15196 PRK15196
type III secretion system effector PipB2;
103-186 2.39e-06

type III secretion system effector PipB2;


Pssm-ID: 185118 [Multi-domain]  Cd Length: 350  Bit Score: 47.31  E-value: 2.39e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489402353 103 GKNLD--------LEAGNFQGALLEGADLREANLSNCSFKGANLKLANFKNANLEGANLEGANLIEANLFGANLknTDLR 174
Cdd:PRK15196 251 GANMDhtnlsgatLIRADMSGATLQGATIMAAIMEGAVLTRANLRKASFISTNLDGADLAEANLNNTCFKDCTL--THLR 328

                         90
                 ....*....|..
gi 489402353 175 RANLTLSELRKT 186
Cdd:PRK15196 329 TEDATMSTSTQT 340
Pentapeptide_4 pfam13599
Pentapeptide repeats (9 copies);
113-179 2.66e-06

Pentapeptide repeats (9 copies);


Pssm-ID: 433339 [Multi-domain]  Cd Length: 78  Bit Score: 44.19  E-value: 2.66e-06
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 489402353  113 FQGALLEGADLREANLSNCSFKGANLKLANFKNANLEGANLEGANLIEANLFGANLKNTDLRRANLT 179
Cdd:pfam13599   8 FEGCKLSGTEFYHATLKDCNFTECNLVNVNFDDCNLRDVDFLEAQLKNAQFSGCNLKNSNFSDVKLK 74
PRK15196 PRK15196
type III secretion system effector PipB2;
103-193 3.76e-06

type III secretion system effector PipB2;


Pssm-ID: 185118 [Multi-domain]  Cd Length: 350  Bit Score: 46.92  E-value: 3.76e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489402353 103 GKNLD---LEAGNFQGALLEGADLRE-----ANLSNCSFKGANLKLANFKNANLEGANL-----EGANLIEANLFGANLK 169
Cdd:PRK15196 221 GATLDhanLTGANLQHASLLGCSMIEcncsgANMDHTNLSGATLIRADMSGATLQGATImaaimEGAVLTRANLRKASFI 300

                         90       100
                 ....*....|....*....|....
gi 489402353 170 NTDLRRANLTLSELRKTKLDGTSL 193
Cdd:PRK15196 301 STNLDGADLAEANLNNTCFKDCTL 324
Pentapeptide pfam00805
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ...
 161-199 5.66e-06

Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.


Pssm-ID: 459943 [Multi-domain]  Cd Length: 40  Bit Score: 41.94  E-value: 5.66e-06
                          10        20        30
                  ....*....|....*....|....*....|....*....
gi 489402353  161 ANLFGANLKNTDLRRANLTLSELRKTKLDGTSLRGAELW 199
Cdd:pfam00805   1 ANLSGANLSGANLSGANLSGANLTGANLSGADLSGANLS 39
Pentapeptide_4 pfam13599
Pentapeptide repeats (9 copies);
125-193 6.05e-06

Pentapeptide repeats (9 copies);


Pssm-ID: 433339 [Multi-domain]  Cd Length: 78  Bit Score: 43.03  E-value: 6.05e-06
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 489402353  125 EANLSNCSFKGANLKLANFKNANLEGANLEGANLIEANLFGANLKNTDLRRANLTLSELRKTKLDGTSL 193
Cdd:pfam13599  10 GCKLSGTEFYHATLKDCNFTECNLVNVNFDDCNLRDVDFLEAQLKNAQFSGCNLKNSNFSDVKLKGADF 78
PRK15196 PRK15196
type III secretion system effector PipB2;
135-226 8.61e-05

type III secretion system effector PipB2;


Pssm-ID: 185118 [Multi-domain]  Cd Length: 350  Bit Score: 42.69  E-value: 8.61e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489402353 135 GANLKLANFKNANLEGANL--------------------EGANLIEANLFGANLKNTDLRRANLTLSELRKTKLDGTSLR 194
Cdd:PRK15196 151 GMNLKGAVLTGANLTAENLcdadlsganlegavlfmadcEGANFKGANLSGTSLGDSNFKNACLEDSIMCGATLDHANLT 230

                         90       100       110
                 ....*....|....*....|....*....|..
gi 489402353 195 GAELWSSSIWGVDFSKAFTEGVDLSRADNRGS 226
Cdd:PRK15196 231 GANLQHASLLGCSMIECNCSGANMDHTNLSGA 262
Pentapeptide_4 pfam13599
Pentapeptide repeats (9 copies);
98-158 1.02e-04

Pentapeptide repeats (9 copies);


Pssm-ID: 433339 [Multi-domain]  Cd Length: 78  Bit Score: 39.56  E-value: 1.02e-04
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 489402353   98 FIKNNGKNLDLEAGNFQGALLEGADLREANLSNCSFKGANLKLANFKNANLEGANLEGANL 158
Cdd:pfam13599  18 FYHATLKDCNFTECNLVNVNFDDCNLRDVDFLEAQLKNAQFSGCNLKNSNFSDVKLKGADF 78
Pentapeptide_4 pfam13599
Pentapeptide repeats (9 copies);
108-163 1.07e-04

Pentapeptide repeats (9 copies);


Pssm-ID: 433339 [Multi-domain]  Cd Length: 78  Bit Score: 39.56  E-value: 1.07e-04
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 489402353  108 LEAGNFQGALLEGADLREANLSNCSFKGANLKLANFKNANLEGANLEGANLIEANL 163
Cdd:pfam13599  23 LKDCNFTECNLVNVNFDDCNLRDVDFLEAQLKNAQFSGCNLKNSNFSDVKLKGADF 78
PRK15377 PRK15377
type III secretion system effector HECT-type E3 ubiquitin transferase;
109-192 2.47e-04

type III secretion system effector HECT-type E3 ubiquitin transferase;


Pssm-ID: 185275 [Multi-domain]  Cd Length: 782  Bit Score: 41.59  E-value: 2.47e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489402353 109 EAGNFQGALLEGADLREANLSNCSFKGA------NLKLANFKNANLEGANLEGANLIEANLFGANLKNTDLRRANLTLSE 182
Cdd:PRK15377 188 EELTYADRDFSNADFRNINFSKINPSGFmlrdgdIIKGFNFSNSKFTYSDISHLHFDECRFTYSTLSDVVCSNTKFSNSD 267

                         90
                 ....*....|
gi 489402353 183 LRKTKLDGTS 192
Cdd:PRK15377 268 MNEASLKYSI 277
PRK15377 PRK15377
type III secretion system effector HECT-type E3 ubiquitin transferase;
104-204 7.83e-04

type III secretion system effector HECT-type E3 ubiquitin transferase;


Pssm-ID: 185275 [Multi-domain]  Cd Length: 782  Bit Score: 40.05  E-value: 7.83e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489402353 104 KNLDLEAGNFQGALLE------GADLREANLSNCSFKGANLKLANFKNANL-----EGANLEGANLIEANLFG------- 165
Cdd:PRK15377 203 RNINFSKINPSGFMLRdgdiikGFNFSNSKFTYSDISHLHFDECRFTYSTLsdvvcSNTKFSNSDMNEASLKYsittqqq 282

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*...
gi 489402353 166 -----ANLKNTDLR-RANLT---LSELRKTKLDGTSLRGAELWSSSIW 204
Cdd:PRK15377 283 psfieTTLKNTIIIhKANLSgviLNEPDNSSPPSVSLGGNFIRLGDIW 330
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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