MULTISPECIES: antitoxin ParD2 [Mycobacterium]
List of domain hits
Name | Accession | Description | Interval | E-value | ||
Unstab_antitox super family | cl09921 | Putative addiction module component; This entry defines several short bacterial proteins, ... |
12-69 | 5.62e-12 | ||
Putative addiction module component; This entry defines several short bacterial proteins, typically about 75 amino acids long, which are always found as part of a pair (at least) of small genes. The other protein in the pair always belongs to a family of plasmid stabilization proteins (IPR007712). It is likely that this protein and its partner comprise some form of addiction module - a pair of genes consisting of a stable toxin and an unstable antitoxin which mediate programmed cell death - although these gene-pairs are usually found on the bacterial main chromosome. The actual alignment was detected with superfamily member TIGR02574: Pssm-ID: 471951 Cd Length: 63 Bit Score: 54.71 E-value: 5.62e-12
|
||||||
Name | Accession | Description | Interval | E-value | ||
stabl_TIGR02574 | TIGR02574 | putative addiction module component, TIGR02574 family; Members of this family are bacterial ... |
12-69 | 5.62e-12 | ||
putative addiction module component, TIGR02574 family; Members of this family are bacterial proteins, typically are about 75 amino acids long, always found as part of a pair (at least) of two small genes. The other in the pair always belongs to a subfamily of the larger family pfam05016 (although not necessarily scoring above the designated cutoff), which contains plasmid stabilization proteins. It is likely that this protein and its pfam05016 member partner comprise some form of addiction module, although these gene pairs usually are found on the bacterial main chromosome. [Mobile and extrachromosomal element functions, Other] Pssm-ID: 131625 Cd Length: 63 Bit Score: 54.71 E-value: 5.62e-12
|
||||||
Name | Accession | Description | Interval | E-value | ||
stabl_TIGR02574 | TIGR02574 | putative addiction module component, TIGR02574 family; Members of this family are bacterial ... |
12-69 | 5.62e-12 | ||
putative addiction module component, TIGR02574 family; Members of this family are bacterial proteins, typically are about 75 amino acids long, always found as part of a pair (at least) of two small genes. The other in the pair always belongs to a subfamily of the larger family pfam05016 (although not necessarily scoring above the designated cutoff), which contains plasmid stabilization proteins. It is likely that this protein and its pfam05016 member partner comprise some form of addiction module, although these gene pairs usually are found on the bacterial main chromosome. [Mobile and extrachromosomal element functions, Other] Pssm-ID: 131625 Cd Length: 63 Bit Score: 54.71 E-value: 5.62e-12
|
||||||
Blast search parameters | ||||
|