|
Name |
Accession |
Description |
Interval |
E-value |
| T7SS_EccC_a |
TIGR03924 |
type VII secretion protein EccCa; This model represents the N-terminal domain or EccCa subunit ... |
26-646 |
0e+00 |
|
type VII secretion protein EccCa; This model represents the N-terminal domain or EccCa subunit of the type VII secretion protein EccC as found in the Actinobacteria. Type VII secretion is defined more broadly as including secretion systems for ESAT-6-like proteins in the Firmicutes as well as in the Actinobacteria, but this family does not show close homologs in the Firmicutes. [Protein fate, Protein and peptide secretion and trafficking]
Pssm-ID: 274858 [Multi-domain] Cd Length: 658 Bit Score: 877.77 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489513485 26 SSLLIRLLPVVMSVATVGVMVTVFLPGSPAtRHPTFLAFPMMMLVSLVVTAVTGRGRRHVSG--IHNDRVDYLGYLSVLR 103
Cdd:TIGR03924 1 GPLLQKLLPVVMVVAVVGMVVMMFASGGRQ-RNPMFLIFPLMMLVSMLGMLAGGRGGGGKKTpeLDEDRRDYLRYLDQLR 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489513485 104 TSVTQTAAAQHVSLNWTHPDPATLWTLIGGPRMWERRPGAADFCRIRVGVGSAPLATRLVVGQLPPAQRADPVTRAALRC 183
Cdd:TIGR03924 80 REVRETAAAQRAALEWRHPDPDTLWALVGTPRMWERRPGDPDFLEVRVGVGVQPLATRLVVPETGPVEDLEPVTAVALRR 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489513485 184 FLAAHATIADAPIAIPLRVGGPIAIDGDPTKVRGLLRAMICQLAVWHSPEELLIAGVVSDRnRAHWDWLKWLPHNQHPNA 263
Cdd:TIGR03924 160 FLRAHSTVPDLPVAVSLRGFARISLVGDRDQARALARAMLCQLAVFHGPDDVGIAVVTSDP-DRDWDWLKWLPHNQHPTR 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489513485 264 CDALGPAPMVYSTLAEMQNALAATVL-------------AHVVAIVDT-------AERGNGAITGVITIEVGARRDGAPP 323
Cdd:TIGR03924 239 FDAAGPARLVYTSLAELEAALAELLAdrgrfspddaaslPHLVVVVDGgdlpgweDLIGESGLDGVTVIDLGGSLPGLPD 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489513485 324 -------------VVRCAGEVTALA-CPDQLEPQDALVCARRLAAHRV---GHSGRTFIRGSGWAELVGIGDVAAFDPST 386
Cdd:TIGR03924 319 rrglrlvveadrlDARTADGVEEFGvAPDQLSIAEAEALARRLARWRAataGTVDAPLTGARDLLELLGIGDPATLDVDR 398
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489513485 387 LWRNVNQHDRLRVPIGVTPDGTAVQLDIKEAAEQGMGPHGLCVGATGSGKSELLRTIALGMMARNSPEVLNLLLVDFKGG 466
Cdd:TIGR03924 399 LWRPRPGRDRLRVPIGVGDDGEPVELDLKESAEGGMGPHGLCIGATGSGKSELLRTLVLGLAATHSPEQLNLVLVDFKGG 478
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489513485 467 ATFLDLAGAPHVAAVITNLAEEAPLVARMQDALAGEMSRRQQLLRMAGHLVSVTAYQRARQTGAQLPCLPILFIVVDEFS 546
Cdd:TIGR03924 479 ATFLGLEGLPHVSAVITNLADEAPLVDRMQDALAGEMNRRQELLRAAGNFANVAEYEKARAAGADLPPLPALFVVVDEFS 558
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489513485 547 ELLSQHPEFVDVFLAIGRVGRSLGMHLLLASQRLDEGRLRGLETHLSYRMCLKTWSASESRNVLGTQDAYQLPNTPGAGL 626
Cdd:TIGR03924 559 ELLSQHPDFADLFVAIGRLGRSLGVHLLLASQRLDEGRLRGLESHLSYRIGLKTFSASESRAVLGVPDAYHLPSTPGAGY 638
|
650 660
....*....|....*....|
gi 489513485 627 LQTGTGELIRFQTAFVSGPL 646
Cdd:TIGR03924 639 LKVDTAEPVRFRAAYVSGPY 658
|
|
| T7SS_EccC_b |
TIGR03925 |
type VII secretion protein EccCb; This model represents the C-terminal domain or EccCb subunit ... |
688-1231 |
0e+00 |
|
type VII secretion protein EccCb; This model represents the C-terminal domain or EccCb subunit of the type VII secretion protein EccC as found in the Actinobacteria. Type VII secretion is defined more broadly as including secretion systems for ESAT-6-like proteins in the Firmicutes as well as in the Actinobacteria, but this family does not show close homologs in the Firmicutes. [Protein fate, Protein and peptide secretion and trafficking]
Pssm-ID: 274859 [Multi-domain] Cd Length: 566 Bit Score: 786.88 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489513485 688 TVLHAVLDRLVGHGPAAHQVWLPPLDEPPMLGALLRDAEP--------AQAELAVPIGIVDRPFEQSRVPLTIDLSGAAG 759
Cdd:TIGR03925 1 TVLDVVVDRLAGQGPPAHQVWLPPLPEPPALDDLLPRLDVdpwrvdygQRGRLTVPVGIVDRPFEQRQDPLVVDLSGAAG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489513485 760 NVAVVGAPQTGKSTALRTLIMALAATHDAGRVQFYCLDFGGGALAQVDELPHVGAVAGRAQPQLASRMLAELESAVRFRE 839
Cdd:TIGR03925 81 HVAIVGAPQSGKSTALRTLILALALTHTPEEVQFYCLDFGGGGLASLADLPHVGGVAGRLDPERVRRTVAEVEGLLRRRE 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489513485 840 AFFRDHGIDSVARYRQLRAKSA--AESFADIFLVIDGWASLRQEFAALEESIVALAAQGLSFGVHVALSAARWAEIRPSL 917
Cdd:TIGR03925 161 RLFRTHGIDSMAQYRARRAAGRlpEDPFGDVFLVIDGWGTLRQDFEDLEDKVTDLAARGLAYGVHVVLTASRWSEIRPAL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489513485 918 RDQIGSRIELRLADPADSELDRRQAQRVPVDRPGRGLSRDGMHMVIALPDLDGVA-------------LRRRSGDPVAPP 984
Cdd:TIGR03925 241 RDLIGTRIELRLGDPMDSEIDRRAAARVPAGRPGRGLTPDGLHMLIALPRLDGIAsvddlgtrglvavIRDVWGGPPAPP 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489513485 985 IPLLPARVDYDSVVARaGDELGAHILLGLEERRGQPVAVDFGRHPHLLVLGDNECGKTAALRTLCREIVRTHTAARAQLL 1064
Cdd:TIGR03925 321 VRLLPARLPLSALPAG-GGAPRLRVPLGLGESDLAPVYVDFAESPHLLIFGDSESGKTTLLRTIARGIVRRYSPDQARLV 399
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489513485 1065 IVDFRHTLLDVIESEHMGGYVSSPAALGAKLSSLVDLLQARMPAPDVSQAQLRARSWWSGPDIYVVVDDYDLVAVSSGNP 1144
Cdd:TIGR03925 400 VVDYRRTLLGAVPEDYLAGYAATSAALTELIAALAALLERRLPGPDVTPQQLRARSWWSGPEIYVVVDDYDLVATGSGNP 479
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489513485 1145 LMVLLEYLPHARDLGLHLVVARRSGGAARALFEPVLASLRDLGCRALLMSGRPDEGALFGSSRPMPLPPGRGILVTGAGD 1224
Cdd:TIGR03925 480 LAPLVELLPHARDIGLHVVVARRSGGAARALMDPVLARLKDLGAPGLLLSGDRDEGPLLGGVRPRPLPPGRGVLVTRGGG 559
|
....*..
gi 489513485 1225 EQLVQVA 1231
Cdd:TIGR03925 560 PQLIQVA 566
|
|
| FtsK_SpoIIIE |
pfam01580 |
FtsK/SpoIIIE family; FtsK has extensive sequence similarity to wide variety of proteins from ... |
721-966 |
8.05e-65 |
|
FtsK/SpoIIIE family; FtsK has extensive sequence similarity to wide variety of proteins from prokaryotes and plasmids, termed the FtsK/SpoIIIE family. This domain contains a putative ATP binding P-loop motif. It is found in the FtsK cell division protein from E. coli and the stage III sporulation protein E SpoIIIE, which has roles in regulation of prespore specific gene expression in B. subtilis. A mutation in FtsK causes a temperature sensitive block in cell division and it is involved in peptidoglycan synthesis or modification. The SpoIIIE protein is implicated in intercellular chromosomal DNA transfer.
Pssm-ID: 279863 [Multi-domain] Cd Length: 219 Bit Score: 218.79 E-value: 8.05e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489513485 721 LLRDAEPAQAELAVPIGIVDRPFEQSRVPLTIDLSGAAGNVAVVGAPQTGKSTALRTLIMALAATHDAGRVQFYCLDFGG 800
Cdd:pfam01580 1 LLEVLESKPFDTDYSRLPIALGKDISGNPEVFDLKKMPVHLLIAGATGSGKSVALNTLILSLAYMHTPEEVQLYCIDPKM 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489513485 801 GALAQVDELPHVGAVAGRAQPQLASRMLAELESAVRFREAFFRDHGIDSVARYRQLRAKSAAESFADIFLVIdgwaslrq 880
Cdd:pfam01580 81 GELSAYEDIPHLLSVPVATDPKRALRALEWLVDEMERRYALFRALGVRSIAGYNGEIAEDPLDGFGDVFLVI-------- 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489513485 881 efaaleesivalaaqglsFGVHVALSAARWAEIRPSLRDQIGSRIELRLADPADSEldrrQAQRVPVDRPGRGLSRDGMH 960
Cdd:pfam01580 153 ------------------YGVHVMCTAGRWLEILPYLVVIVDERAELRLAAPKDSE----MRVEDAIVRLAQKGRAAGIH 210
|
....*.
gi 489513485 961 MVIALP 966
Cdd:pfam01580 211 LLLATQ 216
|
|
| FtsK_SpoIIIE |
pfam01580 |
FtsK/SpoIIIE family; FtsK has extensive sequence similarity to wide variety of proteins from ... |
387-580 |
6.46e-25 |
|
FtsK/SpoIIIE family; FtsK has extensive sequence similarity to wide variety of proteins from prokaryotes and plasmids, termed the FtsK/SpoIIIE family. This domain contains a putative ATP binding P-loop motif. It is found in the FtsK cell division protein from E. coli and the stage III sporulation protein E SpoIIIE, which has roles in regulation of prespore specific gene expression in B. subtilis. A mutation in FtsK causes a temperature sensitive block in cell division and it is involved in peptidoglycan synthesis or modification. The SpoIIIE protein is implicated in intercellular chromosomal DNA transfer.
Pssm-ID: 279863 [Multi-domain] Cd Length: 219 Bit Score: 104.38 E-value: 6.46e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489513485 387 LWRNVNQHDRLRVPIGVTPDGTavqlDIKEAAEQ-GMGPHGLCVGATGSGKSELLRTIALGMMARNSPEVLNLLLVDFKG 465
Cdd:pfam01580 5 LESKPFDTDYSRLPIALGKDIS----GNPEVFDLkKMPVHLLIAGATGSGKSVALNTLILSLAYMHTPEEVQLYCIDPKM 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489513485 466 GAtFLDLAGAPHVAAVitNLAEEAPLVARMQDALAGEMSRRQQLLRMAGhLVSVTAY----------------------Q 523
Cdd:pfam01580 81 GE-LSAYEDIPHLLSV--PVATDPKRALRALEWLVDEMERRYALFRALG-VRSIAGYngeiaedpldgfgdvflviygvH 156
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 489513485 524 RARQTGAQLPCLPILFIVVDEFSELLSQHPEF-----VDVFLAIGRVGRSLGMHLLLASQRL 580
Cdd:pfam01580 157 VMCTAGRWLEILPYLVVIVDERAELRLAAPKDsemrvEDAIVRLAQKGRAAGIHLLLATQRP 218
|
|
| FtsK |
COG1674 |
DNA segregation ATPase FtsK/SpoIIIE or related protein [Cell cycle control, cell division, ... |
372-643 |
3.64e-18 |
|
DNA segregation ATPase FtsK/SpoIIIE or related protein [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 441280 [Multi-domain] Cd Length: 611 Bit Score: 89.98 E-value: 3.64e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489513485 372 ELVGIGDVAAFDpstlwRNVNQHDRLRVPIGVTPDGTAVQLDIKEaaeqgMgPHGLCVGATGSGKSELLRTIALGMMARN 451
Cdd:COG1674 241 ETVYLREVLESD-----EFQNSKSPLPIALGKDISGEPVVADLAK-----M-PHLLIAGATGSGKSVCINAMILSLLYKA 309
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489513485 452 SPEVLNLLLVDFKggatFLDLA---GAPH-VAAVITNlaeeaplvarMQDALA------GEMSRRQQLLRMAG--HLVS- 518
Cdd:COG1674 310 TPDEVRLILIDPK----MVELSvynGIPHlLTPVVTD----------PKKAANalkwavREMERRYKLFAKAGvrNIAGy 375
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489513485 519 ---VTAYQRARQTGAQLPCLPILFIVVDEFSELLSQHPEfvDVFLAIGRV---GRSLGMHLLLASQRLDEGRLRGL-ETH 591
Cdd:COG1674 376 nekVREAKAKGEEEEGLEPLPYIVVIIDELADLMMVAGK--EVEEAIARLaqkARAAGIHLILATQRPSVDVITGLiKAN 453
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 489513485 592 LSYRMCLKTWSASESRNVLGTQDAYQLpntPGAG---LLQTGTGELIRFQTAFVS 643
Cdd:COG1674 454 IPSRIAFAVSSKIDSRTILDQGGAEKL---LGRGdmlFLPPGASKPIRVQGAFVS 505
|
|
| PRK10263 |
PRK10263 |
DNA translocase FtsK; Provisional |
424-655 |
2.07e-10 |
|
DNA translocase FtsK; Provisional
Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 65.49 E-value: 2.07e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489513485 424 PHGLCVGATGSGKSELLRTIALGMMARNSPEVLNLLLVDFKggatFLDLA---GAPH-VAAVITNLAEEAplvarmqDAL 499
Cdd:PRK10263 1011 PHLLVAGTTGSGKSVGVNAMILSMLYKAQPEDVRFIMIDPK----MLELSvyeGIPHlLTEVVTDMKDAA-------NAL 1079
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489513485 500 ---AGEMSRRQQLL------RMAGHLVSVTAYQR------------ARQTGAQLPCL---PILFIVVDEFSELLSQHPEF 555
Cdd:PRK10263 1080 rwcVNEMERRYKLMsalgvrNLAGYNEKIAEADRmmrpipdpywkpGDSMDAQHPVLkkePYIVVLVDEFADLMMTVGKK 1159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489513485 556 VDVFLA-IGRVGRSLGMHLLLASQRLDEGRLRGL-ETHLSYRMCLKTWSASESRNVLGtqdayqlpntpgagllQTGTGE 633
Cdd:PRK10263 1160 VEELIArLAQKARAAGIHLVLATQRPSVDVITGLiKANIPTRIAFTVSSKIDSRTILD----------------QAGAES 1223
|
250 260
....*....|....*....|..
gi 489513485 634 LIRFQTAFVSGPlRRASPSAVH 655
Cdd:PRK10263 1224 LLGMGDMLYSGP-NSTLPVRVH 1244
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| T7SS_EccC_a |
TIGR03924 |
type VII secretion protein EccCa; This model represents the N-terminal domain or EccCa subunit ... |
26-646 |
0e+00 |
|
type VII secretion protein EccCa; This model represents the N-terminal domain or EccCa subunit of the type VII secretion protein EccC as found in the Actinobacteria. Type VII secretion is defined more broadly as including secretion systems for ESAT-6-like proteins in the Firmicutes as well as in the Actinobacteria, but this family does not show close homologs in the Firmicutes. [Protein fate, Protein and peptide secretion and trafficking]
Pssm-ID: 274858 [Multi-domain] Cd Length: 658 Bit Score: 877.77 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489513485 26 SSLLIRLLPVVMSVATVGVMVTVFLPGSPAtRHPTFLAFPMMMLVSLVVTAVTGRGRRHVSG--IHNDRVDYLGYLSVLR 103
Cdd:TIGR03924 1 GPLLQKLLPVVMVVAVVGMVVMMFASGGRQ-RNPMFLIFPLMMLVSMLGMLAGGRGGGGKKTpeLDEDRRDYLRYLDQLR 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489513485 104 TSVTQTAAAQHVSLNWTHPDPATLWTLIGGPRMWERRPGAADFCRIRVGVGSAPLATRLVVGQLPPAQRADPVTRAALRC 183
Cdd:TIGR03924 80 REVRETAAAQRAALEWRHPDPDTLWALVGTPRMWERRPGDPDFLEVRVGVGVQPLATRLVVPETGPVEDLEPVTAVALRR 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489513485 184 FLAAHATIADAPIAIPLRVGGPIAIDGDPTKVRGLLRAMICQLAVWHSPEELLIAGVVSDRnRAHWDWLKWLPHNQHPNA 263
Cdd:TIGR03924 160 FLRAHSTVPDLPVAVSLRGFARISLVGDRDQARALARAMLCQLAVFHGPDDVGIAVVTSDP-DRDWDWLKWLPHNQHPTR 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489513485 264 CDALGPAPMVYSTLAEMQNALAATVL-------------AHVVAIVDT-------AERGNGAITGVITIEVGARRDGAPP 323
Cdd:TIGR03924 239 FDAAGPARLVYTSLAELEAALAELLAdrgrfspddaaslPHLVVVVDGgdlpgweDLIGESGLDGVTVIDLGGSLPGLPD 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489513485 324 -------------VVRCAGEVTALA-CPDQLEPQDALVCARRLAAHRV---GHSGRTFIRGSGWAELVGIGDVAAFDPST 386
Cdd:TIGR03924 319 rrglrlvveadrlDARTADGVEEFGvAPDQLSIAEAEALARRLARWRAataGTVDAPLTGARDLLELLGIGDPATLDVDR 398
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489513485 387 LWRNVNQHDRLRVPIGVTPDGTAVQLDIKEAAEQGMGPHGLCVGATGSGKSELLRTIALGMMARNSPEVLNLLLVDFKGG 466
Cdd:TIGR03924 399 LWRPRPGRDRLRVPIGVGDDGEPVELDLKESAEGGMGPHGLCIGATGSGKSELLRTLVLGLAATHSPEQLNLVLVDFKGG 478
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489513485 467 ATFLDLAGAPHVAAVITNLAEEAPLVARMQDALAGEMSRRQQLLRMAGHLVSVTAYQRARQTGAQLPCLPILFIVVDEFS 546
Cdd:TIGR03924 479 ATFLGLEGLPHVSAVITNLADEAPLVDRMQDALAGEMNRRQELLRAAGNFANVAEYEKARAAGADLPPLPALFVVVDEFS 558
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489513485 547 ELLSQHPEFVDVFLAIGRVGRSLGMHLLLASQRLDEGRLRGLETHLSYRMCLKTWSASESRNVLGTQDAYQLPNTPGAGL 626
Cdd:TIGR03924 559 ELLSQHPDFADLFVAIGRLGRSLGVHLLLASQRLDEGRLRGLESHLSYRIGLKTFSASESRAVLGVPDAYHLPSTPGAGY 638
|
650 660
....*....|....*....|
gi 489513485 627 LQTGTGELIRFQTAFVSGPL 646
Cdd:TIGR03924 639 LKVDTAEPVRFRAAYVSGPY 658
|
|
| T7SS_EccC_b |
TIGR03925 |
type VII secretion protein EccCb; This model represents the C-terminal domain or EccCb subunit ... |
688-1231 |
0e+00 |
|
type VII secretion protein EccCb; This model represents the C-terminal domain or EccCb subunit of the type VII secretion protein EccC as found in the Actinobacteria. Type VII secretion is defined more broadly as including secretion systems for ESAT-6-like proteins in the Firmicutes as well as in the Actinobacteria, but this family does not show close homologs in the Firmicutes. [Protein fate, Protein and peptide secretion and trafficking]
Pssm-ID: 274859 [Multi-domain] Cd Length: 566 Bit Score: 786.88 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489513485 688 TVLHAVLDRLVGHGPAAHQVWLPPLDEPPMLGALLRDAEP--------AQAELAVPIGIVDRPFEQSRVPLTIDLSGAAG 759
Cdd:TIGR03925 1 TVLDVVVDRLAGQGPPAHQVWLPPLPEPPALDDLLPRLDVdpwrvdygQRGRLTVPVGIVDRPFEQRQDPLVVDLSGAAG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489513485 760 NVAVVGAPQTGKSTALRTLIMALAATHDAGRVQFYCLDFGGGALAQVDELPHVGAVAGRAQPQLASRMLAELESAVRFRE 839
Cdd:TIGR03925 81 HVAIVGAPQSGKSTALRTLILALALTHTPEEVQFYCLDFGGGGLASLADLPHVGGVAGRLDPERVRRTVAEVEGLLRRRE 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489513485 840 AFFRDHGIDSVARYRQLRAKSA--AESFADIFLVIDGWASLRQEFAALEESIVALAAQGLSFGVHVALSAARWAEIRPSL 917
Cdd:TIGR03925 161 RLFRTHGIDSMAQYRARRAAGRlpEDPFGDVFLVIDGWGTLRQDFEDLEDKVTDLAARGLAYGVHVVLTASRWSEIRPAL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489513485 918 RDQIGSRIELRLADPADSELDRRQAQRVPVDRPGRGLSRDGMHMVIALPDLDGVA-------------LRRRSGDPVAPP 984
Cdd:TIGR03925 241 RDLIGTRIELRLGDPMDSEIDRRAAARVPAGRPGRGLTPDGLHMLIALPRLDGIAsvddlgtrglvavIRDVWGGPPAPP 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489513485 985 IPLLPARVDYDSVVARaGDELGAHILLGLEERRGQPVAVDFGRHPHLLVLGDNECGKTAALRTLCREIVRTHTAARAQLL 1064
Cdd:TIGR03925 321 VRLLPARLPLSALPAG-GGAPRLRVPLGLGESDLAPVYVDFAESPHLLIFGDSESGKTTLLRTIARGIVRRYSPDQARLV 399
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489513485 1065 IVDFRHTLLDVIESEHMGGYVSSPAALGAKLSSLVDLLQARMPAPDVSQAQLRARSWWSGPDIYVVVDDYDLVAVSSGNP 1144
Cdd:TIGR03925 400 VVDYRRTLLGAVPEDYLAGYAATSAALTELIAALAALLERRLPGPDVTPQQLRARSWWSGPEIYVVVDDYDLVATGSGNP 479
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489513485 1145 LMVLLEYLPHARDLGLHLVVARRSGGAARALFEPVLASLRDLGCRALLMSGRPDEGALFGSSRPMPLPPGRGILVTGAGD 1224
Cdd:TIGR03925 480 LAPLVELLPHARDIGLHVVVARRSGGAARALMDPVLARLKDLGAPGLLLSGDRDEGPLLGGVRPRPLPPGRGVLVTRGGG 559
|
....*..
gi 489513485 1225 EQLVQVA 1231
Cdd:TIGR03925 560 PQLIQVA 566
|
|
| T7_EssCb_Firm |
TIGR03928 |
type VII secretion protein EssC, C-terminal domain; This model describes the C-terminal domain, ... |
9-1165 |
1.41e-129 |
|
type VII secretion protein EssC, C-terminal domain; This model describes the C-terminal domain, or longer subunit, of the Firmicutes type VII secretion protein EssC. This protein (homologous to EccC in Actinobacteria) and the WXG100 target proteins are the only homologous parts of type VII secretion between Firmicutes and Actinobacteria. [Protein fate, Protein and peptide secretion and trafficking]
Pssm-ID: 274860 [Multi-domain] Cd Length: 1296 Bit Score: 429.79 E-value: 1.41e-129
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489513485 9 TADILVAPPPELRRSEPSSLLIRLLPvvmSVATVGVMVTVFLPgSPATrhpTFLAFPMMMLVSLVVTAVTGRGRRHVSgi 88
Cdd:TIGR03928 18 TDKVKISKPPQEPDKPKRGLLRIILP---PLVMIAVTVLISIF-QPRG---IFIIASIAMSLVTIIFSTTTYFREKKK-- 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489513485 89 HNDRV-----DYLGYLSVLRTSVTQTAAAQHVSLNWTHPDPATLWTLIG--GPRMWERRPGAADFCRIRVGVGSAPLATR 161
Cdd:TIGR03928 89 YKKDVekrnrSYRLYLDKKRKELQALSEKQRHVLHYHNPSVEELKEMVEnvNSRIWEKTPEHHDFLHVRLGTGNVPSSFE 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489513485 162 LVVGQLPPAQRADPVTRAAlRCFLAAHATIADAPIAIPLRvGGPIAIDGDPTKVRGLLRAMICQLAVWHSPEELLIAGVV 241
Cdd:TIGR03928 169 IKFPEEEFSQRKDELLDEA-QELKEKYNTIENVPIVLDLS-NGPIGYVGKRSLVLEELQNLVGQLAFFHSYHDVQFVTIF 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489513485 242 SDRNRAHWDWLKWLPHNQHPN-----------ACDAL-------------------GPAPMVYST--------------- 276
Cdd:TIGR03928 247 PEEEKKKWEWMRWLPHFWLRDinvrgfvynerTRDQLlnslyqilkerklalddanSKEKKRFSPhyvflitdrklildh 326
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489513485 277 -----LAEMQNALAATVL----------AHVVAIVDTAERGNGAItgVITIEVGARRDGAPpvvrcagevtalacpDQLE 341
Cdd:TIGR03928 327 vimeyLNEDPSELGISLIfvqdvmeslpENVKTVIDIKNRNEGEI--VLEEGELVEKSFTP---------------DHLD 389
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489513485 342 PQDALVCARRLAA--HRVGHSGR-----TFIrgsgwaELVGIGDVAAFDPSTLWRNVNQHDRLRVPIGVTPDGTAVQLDI 414
Cdd:TIGR03928 390 NEDLEEYSRTLAPlnHLQNLKNSipesvTFL------EMYGVKKVEELNIQERWAKNETYKSLAVPIGLRGKDDIVYLNL 463
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489513485 415 KEAAEqgmGPHGLCVGATGSGKSELLRTIALGMMARNSPEVLNLLLVDFKGGA---TFLDLagaPHVAAVITNLaeEAPL 491
Cdd:TIGR03928 464 HEKAH---GPHGLVAGTTGSGKSEILQTYILSLAVNFHPHEVAFLLIDYKGGGmanLFKNL---PHLLGTITNL--DGAQ 535
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489513485 492 VARMQDALAGEMSRRQQLLrmAGHLVS-VTAYQRARQTGAQLPCLPILFIVVDEFSELLSQHPEFVDVFLAIGRVGRSLG 570
Cdd:TIGR03928 536 SMRALASIKAELKKRQRLF--GENNVNhINQYQKLYKQGKAKEPMPHLFLISDEFAELKSEQPEFMKELVSTARIGRSLG 613
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489513485 571 MHLLLASQR----LDEGrlrgLETHLSYRMCLKTWSASESRNVLGTQDAYQLpNTPGAGLLQTGTGELIR-FQTAFvSGP 645
Cdd:TIGR03928 614 VHLILATQKpsgvVDDQ----IWSNSRFKLALKVQDASDSNEILKTPDAAEI-TVPGRAYLQVGNNEVYElFQSAW-SGA 687
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489513485 646 LRRASPSAVHPVAPPSVRPFTTHAAAPVTAGPVGGTAEVPT-PTVLHAVLDRLVG-----HGPAAHQVWLPPLDEPPMLG 719
Cdd:TIGR03928 688 PYDPDKDKKEEEDIYMINDLGQYELLNEDLSGLKRKKEIKEvPTELEAVIDEIQAyteelNIEALPSPWLPPLEEKIYLD 767
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489513485 720 ALLRDAE-----PAQAELAVPIGIVDRPFEQSRVPLTIDLSgAAGNVAVVGAPQTGKSTALRTLIMALAATHDAGRVQFY 794
Cdd:TIGR03928 768 DLHAVEFdklwsKPKEPLQATIGLLDDPELQSQEPLTLDLS-KDGHLAIFGSPGYGKSTFLQTLIMSLARQHSPEQLHFY 846
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489513485 795 CLDFGGGALAQVDELPHVGAVAGRAQPQLASRMLAELESAVRFREAFFRDHGIDSVARYRQLraksAAESFADIFLVIDG 874
Cdd:TIGR03928 847 LFDFGTNGLLPLKKLPHVADYFTLDEEEKIEKLIRRIKKEIDRRKKLFSEYGVASISMYNKA----SGEKLPQIVIIIDN 922
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489513485 875 WASLRQE--FAALEESIVALAAQGLSFGVHVALSAARWAEIRPSLRDQIGSRIELRLADPAD-SELDRRQaQRVPVDRPG 951
Cdd:TIGR03928 923 YDAVKEEpfYEDFEELLIQLAREGASLGIYLVMTAGRQNAVRMPLMNNIKTKIALYLIDKSEyRSIVGRT-KFTIEEIPG 1001
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489513485 952 RGLSRDGMHMV--IALP-----DL--------DGVALRRRSGDPVAPPIPLLPARVDYDSVVAR---AGDELGAHILLGL 1013
Cdd:TIGR03928 1002 RGLIKKDEPTLfqTALPvkgedDLevienikaEIQKMNEAWTGERPKPIPMVPEELSLEEFRERyevRKILEEGSIPIGL 1081
|
1130 1140 1150 1160 1170 1180 1190 1200
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489513485 1014 EERRGQPVAVDFGRHPHLLVLGDNECGKTAALRTLCREIVRTHTaarAQLLIVDFR-HTLLDVIESEHMGGYVSSPAALG 1092
Cdd:TIGR03928 1082 DEETVEPVYIDLTENPHLLIVGESDDGKTNVLKSLLKTLAKQEK---EKIGLIDSIdRGLLAYRDLKEVATYIEEKEDLK 1158
|
1210 1220 1230 1240 1250 1260 1270
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 489513485 1093 AKLSSLVDLLQARMPApdVSQAQLRARSWWSGPDIYVVVDDYD----LVAVSSGNPLMVLLEYLPHardLGLHLVVA 1165
Cdd:TIGR03928 1159 EILAELKEEIELREAA--YKEALQNETGEPAFKPILLIIDDLEdfiqRTDLEIQDILALIMKNGKK---LGIHFIVA 1230
|
|
| FtsK_SpoIIIE |
pfam01580 |
FtsK/SpoIIIE family; FtsK has extensive sequence similarity to wide variety of proteins from ... |
721-966 |
8.05e-65 |
|
FtsK/SpoIIIE family; FtsK has extensive sequence similarity to wide variety of proteins from prokaryotes and plasmids, termed the FtsK/SpoIIIE family. This domain contains a putative ATP binding P-loop motif. It is found in the FtsK cell division protein from E. coli and the stage III sporulation protein E SpoIIIE, which has roles in regulation of prespore specific gene expression in B. subtilis. A mutation in FtsK causes a temperature sensitive block in cell division and it is involved in peptidoglycan synthesis or modification. The SpoIIIE protein is implicated in intercellular chromosomal DNA transfer.
Pssm-ID: 279863 [Multi-domain] Cd Length: 219 Bit Score: 218.79 E-value: 8.05e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489513485 721 LLRDAEPAQAELAVPIGIVDRPFEQSRVPLTIDLSGAAGNVAVVGAPQTGKSTALRTLIMALAATHDAGRVQFYCLDFGG 800
Cdd:pfam01580 1 LLEVLESKPFDTDYSRLPIALGKDISGNPEVFDLKKMPVHLLIAGATGSGKSVALNTLILSLAYMHTPEEVQLYCIDPKM 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489513485 801 GALAQVDELPHVGAVAGRAQPQLASRMLAELESAVRFREAFFRDHGIDSVARYRQLRAKSAAESFADIFLVIdgwaslrq 880
Cdd:pfam01580 81 GELSAYEDIPHLLSVPVATDPKRALRALEWLVDEMERRYALFRALGVRSIAGYNGEIAEDPLDGFGDVFLVI-------- 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489513485 881 efaaleesivalaaqglsFGVHVALSAARWAEIRPSLRDQIGSRIELRLADPADSEldrrQAQRVPVDRPGRGLSRDGMH 960
Cdd:pfam01580 153 ------------------YGVHVMCTAGRWLEILPYLVVIVDERAELRLAAPKDSE----MRVEDAIVRLAQKGRAAGIH 210
|
....*.
gi 489513485 961 MVIALP 966
Cdd:pfam01580 211 LLLATQ 216
|
|
| FtsK_SpoIIIE |
pfam01580 |
FtsK/SpoIIIE family; FtsK has extensive sequence similarity to wide variety of proteins from ... |
387-580 |
6.46e-25 |
|
FtsK/SpoIIIE family; FtsK has extensive sequence similarity to wide variety of proteins from prokaryotes and plasmids, termed the FtsK/SpoIIIE family. This domain contains a putative ATP binding P-loop motif. It is found in the FtsK cell division protein from E. coli and the stage III sporulation protein E SpoIIIE, which has roles in regulation of prespore specific gene expression in B. subtilis. A mutation in FtsK causes a temperature sensitive block in cell division and it is involved in peptidoglycan synthesis or modification. The SpoIIIE protein is implicated in intercellular chromosomal DNA transfer.
Pssm-ID: 279863 [Multi-domain] Cd Length: 219 Bit Score: 104.38 E-value: 6.46e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489513485 387 LWRNVNQHDRLRVPIGVTPDGTavqlDIKEAAEQ-GMGPHGLCVGATGSGKSELLRTIALGMMARNSPEVLNLLLVDFKG 465
Cdd:pfam01580 5 LESKPFDTDYSRLPIALGKDIS----GNPEVFDLkKMPVHLLIAGATGSGKSVALNTLILSLAYMHTPEEVQLYCIDPKM 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489513485 466 GAtFLDLAGAPHVAAVitNLAEEAPLVARMQDALAGEMSRRQQLLRMAGhLVSVTAY----------------------Q 523
Cdd:pfam01580 81 GE-LSAYEDIPHLLSV--PVATDPKRALRALEWLVDEMERRYALFRALG-VRSIAGYngeiaedpldgfgdvflviygvH 156
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 489513485 524 RARQTGAQLPCLPILFIVVDEFSELLSQHPEF-----VDVFLAIGRVGRSLGMHLLLASQRL 580
Cdd:pfam01580 157 VMCTAGRWLEILPYLVVIVDERAELRLAAPKDsemrvEDAIVRLAQKGRAAGIHLLLATQRP 218
|
|
| T7SS_EccC_b |
TIGR03925 |
type VII secretion protein EccCb; This model represents the C-terminal domain or EccCb subunit ... |
379-903 |
4.38e-24 |
|
type VII secretion protein EccCb; This model represents the C-terminal domain or EccCb subunit of the type VII secretion protein EccC as found in the Actinobacteria. Type VII secretion is defined more broadly as including secretion systems for ESAT-6-like proteins in the Firmicutes as well as in the Actinobacteria, but this family does not show close homologs in the Firmicutes. [Protein fate, Protein and peptide secretion and trafficking]
Pssm-ID: 274859 [Multi-domain] Cd Length: 566 Bit Score: 108.54 E-value: 4.38e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489513485 379 VAAFDPSTLWRNVNQHDRLRVPIGVTPDGTAVQLDIKEAAEQGMGPHGLCVGATGSGKSELLRTIALGMMARNSPEVLNL 458
Cdd:TIGR03925 35 LPRLDVDPWRVDYGQRGRLTVPVGIVDRPFEQRQDPLVVDLSGAAGHVAIVGAPQSGKSTALRTLILALALTHTPEEVQF 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489513485 459 LLVDFkGGATFLDLAGAPHVAAVITNLAEEapLVARMQDALAGEMSRRQQLLRMAGhlVSVTAYQRARQTGAQLPCLPI- 537
Cdd:TIGR03925 115 YCLDF-GGGGLASLADLPHVGGVAGRLDPE--RVRRTVAEVEGLLRRRERLFRTHG--IDSMAQYRARRAAGRLPEDPFg 189
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489513485 538 -LFIVVDEFSELLSQHPEFVDVFLAIGRVGRSLGMHLLLASQRLDEGRLRgLETHLSYRMCLKTWSASESrnVLGTQDAY 616
Cdd:TIGR03925 190 dVFLVIDGWGTLRQDFEDLEDKVTDLAARGLAYGVHVVLTASRWSEIRPA-LRDLIGTRIELRLGDPMDS--EIDRRAAA 266
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489513485 617 QLPN-TPGAGLlqtgtgelirfqtafvsgplrraSPSAVHPVappsvrpftthAAAPVTAGPvgGTAEVPTPTVLHAVLd 695
Cdd:TIGR03925 267 RVPAgRPGRGL-----------------------TPDGLHML-----------IALPRLDGI--ASVDDLGTRGLVAVI- 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489513485 696 RLVGHGPAAHQVWLPPLDEPPmlgALLrDAEPAQAELAVPIGIVDRPFEqsrvPLTIDLsGAAGNVAVVGAPQTGKSTAL 775
Cdd:TIGR03925 310 RDVWGGPPAPPVRLLPARLPL---SAL-PAGGGAPRLRVPLGLGESDLA----PVYVDF-AESPHLLIFGDSESGKTTLL 380
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489513485 776 RTLIMALAATHDAGRVQFYCLDFGGGALAQVDElPHVGAVAGRaqpqlASRMLAELESAVRFREAFFRDHGIDSvaryRQ 855
Cdd:TIGR03925 381 RTIARGIVRRYSPDQARLVVVDYRRTLLGAVPE-DYLAGYAAT-----SAALTELIAALAALLERRLPGPDVTP----QQ 450
|
490 500 510 520
....*....|....*....|....*....|....*....|....*...
gi 489513485 856 LRAKSAAESfADIFLVIDGWASLRQEFAALEESIVALAAQGLSFGVHV 903
Cdd:TIGR03925 451 LRARSWWSG-PEIYVVVDDYDLVATGSGNPLAPLVELLPHARDIGLHV 497
|
|
| T7_EssCb_Firm |
TIGR03928 |
type VII secretion protein EssC, C-terminal domain; This model describes the C-terminal domain, ... |
732-1218 |
2.43e-19 |
|
type VII secretion protein EssC, C-terminal domain; This model describes the C-terminal domain, or longer subunit, of the Firmicutes type VII secretion protein EssC. This protein (homologous to EccC in Actinobacteria) and the WXG100 target proteins are the only homologous parts of type VII secretion between Firmicutes and Actinobacteria. [Protein fate, Protein and peptide secretion and trafficking]
Pssm-ID: 274860 [Multi-domain] Cd Length: 1296 Bit Score: 94.67 E-value: 2.43e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489513485 732 LAVPIGIV--DRPFEqsrvpltIDLS----GAAGNVAvvGAPQTGKSTALRTLIMALAATHDAGRVQFYCLDFGGGALAQ 805
Cdd:TIGR03928 446 LAVPIGLRgkDDIVY-------LNLHekahGPHGLVA--GTTGSGKSEILQTYILSLAVNFHPHEVAFLLIDYKGGGMAN 516
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489513485 806 V-DELPH-VGAVAGRAQPQLAsRMLAELESAVRFREAFFRDHGIDSVARYRQL-RAKSAAESFADIFLVIDGWASLRQEF 882
Cdd:TIGR03928 517 LfKNLPHlLGTITNLDGAQSM-RALASIKAELKKRQRLFGENNVNHINQYQKLyKQGKAKEPMPHLFLISDEFAELKSEQ 595
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489513485 883 AALEESIVALAAQGLSFGVHVALsaarwAEIRPS--LRDQIGS----RIELRLADPADSE--LDRRQAQRVPVdrPGRG- 953
Cdd:TIGR03928 596 PEFMKELVSTARIGRSLGVHLIL-----ATQKPSgvVDDQIWSnsrfKLALKVQDASDSNeiLKTPDAAEITV--PGRAy 668
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489513485 954 ---------------------------LSRDGMHMV-------IALPDLDGVALRRRSGDPVA----------------- 982
Cdd:TIGR03928 669 lqvgnnevyelfqsawsgapydpdkdkKEEEDIYMIndlgqyeLLNEDLSGLKRKKEIKEVPTeleavideiqayteeln 748
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489513485 983 ------PPIPLLPARVDYDSVVARAGDELGA------HILLGL----EERRGQPVAVDFGRHPHLLVLGDNECGKTAALR 1046
Cdd:TIGR03928 749 iealpsPWLPPLEEKIYLDDLHAVEFDKLWSkpkeplQATIGLlddpELQSQEPLTLDLSKDGHLAIFGSPGYGKSTFLQ 828
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489513485 1047 TLCREIVRTHTAARAQLLIVDF-RHTLLDVIESEHMGGYVSSP-----AALGAKLSSLVDLLQARMPAPDVSQAQL-RAR 1119
Cdd:TIGR03928 829 TLIMSLARQHSPEQLHFYLFDFgTNGLLPLKKLPHVADYFTLDeeekiEKLIRRIKKEIDRRKKLFSEYGVASISMyNKA 908
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489513485 1120 SWWSGPDIYVVVDDYDLVAVSSG----NPLMVLLeylphARD---LGLHLVVarrSGGAARALFEPVLASLRDLgcRALL 1192
Cdd:TIGR03928 909 SGEKLPQIVIIIDNYDAVKEEPFyedfEELLIQL-----AREgasLGIYLVM---TAGRQNAVRMPLMNNIKTK--IALY 978
|
570 580
....*....|....*....|....*..
gi 489513485 1193 MSGRPDEGALFGSSRPMPLP-PGRGIL 1218
Cdd:TIGR03928 979 LIDKSEYRSIVGRTKFTIEEiPGRGLI 1005
|
|
| FtsK |
COG1674 |
DNA segregation ATPase FtsK/SpoIIIE or related protein [Cell cycle control, cell division, ... |
372-643 |
3.64e-18 |
|
DNA segregation ATPase FtsK/SpoIIIE or related protein [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 441280 [Multi-domain] Cd Length: 611 Bit Score: 89.98 E-value: 3.64e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489513485 372 ELVGIGDVAAFDpstlwRNVNQHDRLRVPIGVTPDGTAVQLDIKEaaeqgMgPHGLCVGATGSGKSELLRTIALGMMARN 451
Cdd:COG1674 241 ETVYLREVLESD-----EFQNSKSPLPIALGKDISGEPVVADLAK-----M-PHLLIAGATGSGKSVCINAMILSLLYKA 309
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489513485 452 SPEVLNLLLVDFKggatFLDLA---GAPH-VAAVITNlaeeaplvarMQDALA------GEMSRRQQLLRMAG--HLVS- 518
Cdd:COG1674 310 TPDEVRLILIDPK----MVELSvynGIPHlLTPVVTD----------PKKAANalkwavREMERRYKLFAKAGvrNIAGy 375
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489513485 519 ---VTAYQRARQTGAQLPCLPILFIVVDEFSELLSQHPEfvDVFLAIGRV---GRSLGMHLLLASQRLDEGRLRGL-ETH 591
Cdd:COG1674 376 nekVREAKAKGEEEEGLEPLPYIVVIIDELADLMMVAGK--EVEEAIARLaqkARAAGIHLILATQRPSVDVITGLiKAN 453
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 489513485 592 LSYRMCLKTWSASESRNVLGTQDAYQLpntPGAG---LLQTGTGELIRFQTAFVS 643
Cdd:COG1674 454 IPSRIAFAVSSKIDSRTILDQGGAEKL---LGRGdmlFLPPGASKPIRVQGAFVS 505
|
|
| T7SS_EccC_a |
TIGR03924 |
type VII secretion protein EccCa; This model represents the N-terminal domain or EccCa subunit ... |
678-935 |
4.83e-16 |
|
type VII secretion protein EccCa; This model represents the N-terminal domain or EccCa subunit of the type VII secretion protein EccC as found in the Actinobacteria. Type VII secretion is defined more broadly as including secretion systems for ESAT-6-like proteins in the Firmicutes as well as in the Actinobacteria, but this family does not show close homologs in the Firmicutes. [Protein fate, Protein and peptide secretion and trafficking]
Pssm-ID: 274858 [Multi-domain] Cd Length: 658 Bit Score: 83.10 E-value: 4.83e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489513485 678 VGGTAEVPTPTVLHAVLDRLVGHGPAAH----QVWLPPldeppmlgallrdaePAQAELAVPIGIVDrpfeqSRVPLTID 753
Cdd:TIGR03924 366 AATAGTVDAPLTGARDLLELLGIGDPATldvdRLWRPR---------------PGRDRLRVPIGVGD-----DGEPVELD 425
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489513485 754 LSGAAGNVA-----VVGAPQTGKSTALRTLIMALAATHDAGRVQFYCLDFGGGALAQV-DELPHVGAVA---GRAQPqLA 824
Cdd:TIGR03924 426 LKESAEGGMgphglCIGATGSGKSELLRTLVLGLAATHSPEQLNLVLVDFKGGATFLGlEGLPHVSAVItnlADEAP-LV 504
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489513485 825 SRMLAELESAVRFREAFFRDHG-IDSVARYRQLRAKSAA-ESFADIFLVIDGWASL---RQEFAALeesIVALAAQGLSF 899
Cdd:TIGR03924 505 DRMQDALAGEMNRRQELLRAAGnFANVAEYEKARAAGADlPPLPALFVVVDEFSELlsqHPDFADL---FVAIGRLGRSL 581
|
250 260 270
....*....|....*....|....*....|....*..
gi 489513485 900 GVHVALSAARWAEIR-PSLRDQIGSRIELRLADPADS 935
Cdd:TIGR03924 582 GVHLLLASQRLDEGRlRGLESHLSYRIGLKTFSASES 618
|
|
| PRK10263 |
PRK10263 |
DNA translocase FtsK; Provisional |
424-655 |
2.07e-10 |
|
DNA translocase FtsK; Provisional
Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 65.49 E-value: 2.07e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489513485 424 PHGLCVGATGSGKSELLRTIALGMMARNSPEVLNLLLVDFKggatFLDLA---GAPH-VAAVITNLAEEAplvarmqDAL 499
Cdd:PRK10263 1011 PHLLVAGTTGSGKSVGVNAMILSMLYKAQPEDVRFIMIDPK----MLELSvyeGIPHlLTEVVTDMKDAA-------NAL 1079
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489513485 500 ---AGEMSRRQQLL------RMAGHLVSVTAYQR------------ARQTGAQLPCL---PILFIVVDEFSELLSQHPEF 555
Cdd:PRK10263 1080 rwcVNEMERRYKLMsalgvrNLAGYNEKIAEADRmmrpipdpywkpGDSMDAQHPVLkkePYIVVLVDEFADLMMTVGKK 1159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489513485 556 VDVFLA-IGRVGRSLGMHLLLASQRLDEGRLRGL-ETHLSYRMCLKTWSASESRNVLGtqdayqlpntpgagllQTGTGE 633
Cdd:PRK10263 1160 VEELIArLAQKARAAGIHLVLATQRPSVDVITGLiKANIPTRIAFTVSSKIDSRTILD----------------QAGAES 1223
|
250 260
....*....|....*....|..
gi 489513485 634 LIRFQTAFVSGPlRRASPSAVH 655
Cdd:PRK10263 1224 LLGMGDMLYSGP-NSTLPVRVH 1244
|
|
| T7SS_EccC_b |
TIGR03925 |
type VII secretion protein EccCb; This model represents the C-terminal domain or EccCb subunit ... |
395-576 |
3.30e-09 |
|
type VII secretion protein EccCb; This model represents the C-terminal domain or EccCb subunit of the type VII secretion protein EccC as found in the Actinobacteria. Type VII secretion is defined more broadly as including secretion systems for ESAT-6-like proteins in the Firmicutes as well as in the Actinobacteria, but this family does not show close homologs in the Firmicutes. [Protein fate, Protein and peptide secretion and trafficking]
Pssm-ID: 274859 [Multi-domain] Cd Length: 566 Bit Score: 61.16 E-value: 3.30e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489513485 395 DRLRVPIGVT-PDGTAVQLDIKEAaeqgmgPHGLCVGATGSGKSELLRTIALGMMARNSPEVLNLLLVDFKggATFLDLA 473
Cdd:TIGR03925 340 PRLRVPLGLGeSDLAPVYVDFAES------PHLLIFGDSESGKTTLLRTIARGIVRRYSPDQARLVVVDYR--RTLLGAV 411
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489513485 474 GAPHVAAVITNLAEEAPLVArmqdALAGEMSRrqqllRMAGHlvSVTAYQ-RARQ--TGaqlpclPILFIVVDEFSELLS 550
Cdd:TIGR03925 412 PEDYLAGYAATSAALTELIA----ALAALLER-----RLPGP--DVTPQQlRARSwwSG------PEIYVVVDDYDLVAT 474
|
170 180
....*....|....*....|....*.
gi 489513485 551 QHPEFVDVFLAIGRVGRSLGMHLLLA 576
Cdd:TIGR03925 475 GSGNPLAPLVELLPHARDIGLHVVVA 500
|
|
| HerA |
COG0433 |
Archaeal DNA helicase HerA or a related bacterial ATPase, contains HAS-barrel and ATPase ... |
398-491 |
2.34e-04 |
|
Archaeal DNA helicase HerA or a related bacterial ATPase, contains HAS-barrel and ATPase domains [Replication, recombination and repair];
Pssm-ID: 440202 [Multi-domain] Cd Length: 388 Bit Score: 44.98 E-value: 2.34e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489513485 398 RVPIG-VTPDGTAVQLDIKEAaeqgMGPHGLCVGATGSGKSELLRTIALGMMARNSPevlnLLLVDFKGGATFLDLAGAP 476
Cdd:COG0433 25 GILIGkLLSPGVPVYLDLDKL----LNRHILILGATGSGKSNTLQVLLEELSRAGVP----VLVFDPHGEYSGLAEPGAE 96
|
90
....*....|....*
gi 489513485 477 HVAAVITNLAEEAPL 491
Cdd:COG0433 97 RADVGVFDPGAGRPL 111
|
|
| |
