EutP/PduV family microcompartment system protein [Clostridioides difficile]
EutP/PduV family microcompartment system protein( domain architecture ID 10566397)
EutP/PduV family microcompartment system protein
List of domain hits
Name | Accession | Description | Interval | E-value | |||
PduV-EutP | pfam10662 | Ethanolamine utilization - propanediol utilization; Members of this family function in ... |
1-136 | 1.37e-78 | |||
Ethanolamine utilization - propanediol utilization; Members of this family function in ethanolamine and propanediol degradation pathways. PduV may be involved in the association of the bacterial microcompartments (BMCs) to filaments. : Pssm-ID: 402341 [Multi-domain] Cd Length: 137 Bit Score: 228.70 E-value: 1.37e-78
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Name | Accession | Description | Interval | E-value | |||
PduV-EutP | pfam10662 | Ethanolamine utilization - propanediol utilization; Members of this family function in ... |
1-136 | 1.37e-78 | |||
Ethanolamine utilization - propanediol utilization; Members of this family function in ethanolamine and propanediol degradation pathways. PduV may be involved in the association of the bacterial microcompartments (BMCs) to filaments. Pssm-ID: 402341 [Multi-domain] Cd Length: 137 Bit Score: 228.70 E-value: 1.37e-78
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EutP | COG4917 | Ethanolamine utilization protein EutP, contains a P-loop NTPase domain [Amino acid transport ... |
1-143 | 4.37e-73 | |||
Ethanolamine utilization protein EutP, contains a P-loop NTPase domain [Amino acid transport and metabolism]; Pssm-ID: 443945 [Multi-domain] Cd Length: 145 Bit Score: 215.05 E-value: 4.37e-73
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EutP | TIGR02528 | ethanolamine utilization protein, EutP; This protein is found within operons which code for ... |
2-142 | 4.30e-64 | |||
ethanolamine utilization protein, EutP; This protein is found within operons which code for polyhedral organelles containing the enzyme ethanolamine ammonia lyase. The function of this gene is unknown, although the presence of an N-terminal GxxGxGK motif implies a GTP-binding site. [Energy metabolism, Amino acids and amines] Pssm-ID: 131580 [Multi-domain] Cd Length: 142 Bit Score: 192.27 E-value: 4.30e-64
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PRK15467 | PRK15467 | ethanolamine utilization acetate kinase EutP; |
1-148 | 1.08e-16 | |||
ethanolamine utilization acetate kinase EutP; Pssm-ID: 185364 [Multi-domain] Cd Length: 158 Bit Score: 71.92 E-value: 1.08e-16
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Ras_like_GTPase | cd00882 | Rat sarcoma (Ras)-like superfamily of small guanosine triphosphatases (GTPases); Ras-like ... |
6-140 | 6.18e-06 | |||
Rat sarcoma (Ras)-like superfamily of small guanosine triphosphatases (GTPases); Ras-like GTPase superfamily. The Ras-like superfamily of small GTPases consists of several families with an extremely high degree of structural and functional similarity. The Ras superfamily is divided into at least four families in eukaryotes: the Ras, Rho, Rab, and Sar1/Arf families. This superfamily also includes proteins like the GTP translation factors, Era-like GTPases, and G-alpha chain of the heterotrimeric G proteins. Members of the Ras superfamily regulate a wide variety of cellular functions: the Ras family regulates gene expression, the Rho family regulates cytoskeletal reorganization and gene expression, the Rab and Sar1/Arf families regulate vesicle trafficking, and the Ran family regulates nucleocytoplasmic transport and microtubule organization. The GTP translation factor family regulates initiation, elongation, termination, and release in translation, and the Era-like GTPase family regulates cell division, sporulation, and DNA replication. Members of the Ras superfamily are identified by the GTP binding site, which is made up of five characteristic sequence motifs, and the switch I and switch II regions. Pssm-ID: 206648 [Multi-domain] Cd Length: 161 Bit Score: 43.60 E-value: 6.18e-06
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Name | Accession | Description | Interval | E-value | ||||
PduV-EutP | pfam10662 | Ethanolamine utilization - propanediol utilization; Members of this family function in ... |
1-136 | 1.37e-78 | ||||
Ethanolamine utilization - propanediol utilization; Members of this family function in ethanolamine and propanediol degradation pathways. PduV may be involved in the association of the bacterial microcompartments (BMCs) to filaments. Pssm-ID: 402341 [Multi-domain] Cd Length: 137 Bit Score: 228.70 E-value: 1.37e-78
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EutP | COG4917 | Ethanolamine utilization protein EutP, contains a P-loop NTPase domain [Amino acid transport ... |
1-143 | 4.37e-73 | ||||
Ethanolamine utilization protein EutP, contains a P-loop NTPase domain [Amino acid transport and metabolism]; Pssm-ID: 443945 [Multi-domain] Cd Length: 145 Bit Score: 215.05 E-value: 4.37e-73
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EutP | TIGR02528 | ethanolamine utilization protein, EutP; This protein is found within operons which code for ... |
2-142 | 4.30e-64 | ||||
ethanolamine utilization protein, EutP; This protein is found within operons which code for polyhedral organelles containing the enzyme ethanolamine ammonia lyase. The function of this gene is unknown, although the presence of an N-terminal GxxGxGK motif implies a GTP-binding site. [Energy metabolism, Amino acids and amines] Pssm-ID: 131580 [Multi-domain] Cd Length: 142 Bit Score: 192.27 E-value: 4.30e-64
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PRK15467 | PRK15467 | ethanolamine utilization acetate kinase EutP; |
1-148 | 1.08e-16 | ||||
ethanolamine utilization acetate kinase EutP; Pssm-ID: 185364 [Multi-domain] Cd Length: 158 Bit Score: 71.92 E-value: 1.08e-16
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Gem1 | COG1100 | GTPase SAR1 family domain [General function prediction only]; |
2-140 | 1.88e-06 | ||||
GTPase SAR1 family domain [General function prediction only]; Pssm-ID: 440717 [Multi-domain] Cd Length: 177 Bit Score: 44.97 E-value: 1.88e-06
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Ras_like_GTPase | cd00882 | Rat sarcoma (Ras)-like superfamily of small guanosine triphosphatases (GTPases); Ras-like ... |
6-140 | 6.18e-06 | ||||
Rat sarcoma (Ras)-like superfamily of small guanosine triphosphatases (GTPases); Ras-like GTPase superfamily. The Ras-like superfamily of small GTPases consists of several families with an extremely high degree of structural and functional similarity. The Ras superfamily is divided into at least four families in eukaryotes: the Ras, Rho, Rab, and Sar1/Arf families. This superfamily also includes proteins like the GTP translation factors, Era-like GTPases, and G-alpha chain of the heterotrimeric G proteins. Members of the Ras superfamily regulate a wide variety of cellular functions: the Ras family regulates gene expression, the Rho family regulates cytoskeletal reorganization and gene expression, the Rab and Sar1/Arf families regulate vesicle trafficking, and the Ran family regulates nucleocytoplasmic transport and microtubule organization. The GTP translation factor family regulates initiation, elongation, termination, and release in translation, and the Era-like GTPase family regulates cell division, sporulation, and DNA replication. Members of the Ras superfamily are identified by the GTP binding site, which is made up of five characteristic sequence motifs, and the switch I and switch II regions. Pssm-ID: 206648 [Multi-domain] Cd Length: 161 Bit Score: 43.60 E-value: 6.18e-06
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Ras_dva | cd04147 | Ras - dorsal-ventral anterior localization (Ras-dva) family; Ras-dva subfamily. Ras-dva (Ras - ... |
4-79 | 1.39e-03 | ||||
Ras - dorsal-ventral anterior localization (Ras-dva) family; Ras-dva subfamily. Ras-dva (Ras - dorsal-ventral anterior localization) subfamily consists of a set of proteins characterized only in Xenopus leavis, to date. In Xenopus Ras-dva expression is activated by the transcription factor Otx2 and begins during gastrulation throughout the anterior ectoderm. Ras-dva expression is inhibited in the anterior neural plate by factor Xanf1. Downregulation of Ras-dva results in head development abnormalities through the inhibition of several regulators of the anterior neural plate and folds patterning, including Otx2, BF-1, Xag2, Pax6, Slug, and Sox9. Downregulation of Ras-dva also interferes with the FGF-8a signaling within the anterior ectoderm. Most Ras proteins contain a lipid modification site at the C-terminus, with a typical sequence motif CaaX, where a = an aliphatic amino acid and X = any amino acid. Lipid binding is essential for membrane attachment, a key feature of most Ras proteins. Pssm-ID: 206714 [Multi-domain] Cd Length: 197 Bit Score: 37.13 E-value: 1.39e-03
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DLIC | pfam05783 | Dynein light intermediate chain (DLIC); This family consists of several eukaryotic dynein ... |
2-42 | 2.09e-03 | ||||
Dynein light intermediate chain (DLIC); This family consists of several eukaryotic dynein light intermediate chain proteins. The light intermediate chains (LICs) of cytoplasmic dynein consist of multiple isoforms, which undergo post-translational modification to produce a large number of species. DLIC1 is known to be involved in assembly, organization, and function of centrosomes and mitotic spindles when bound to pericentrin. DLIC2 is a subunit of cytoplasmic dynein 2 that may play a role in maintaining Golgi organization by binding cytoplasmic dynein 2 to its Golgi-associated cargo. Pssm-ID: 368612 Cd Length: 468 Bit Score: 37.13 E-value: 2.09e-03
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YfjP | cd11383 | YfjP GTPase; The Era (E. coli Ras-like protein)-like YfjP subfamily includes several ... |
6-26 | 4.23e-03 | ||||
YfjP GTPase; The Era (E. coli Ras-like protein)-like YfjP subfamily includes several uncharacterized bacterial GTPases that are similar to Era. They generally show sequence conservation in the region between the Walker A and B motifs (G1 and G3 box motifs), to the exclusion of other GTPases. Era is characterized by a distinct derivative of the KH domain (the pseudo-KH domain) which is located C-terminal to the GTPase domain. Pssm-ID: 206743 [Multi-domain] Cd Length: 140 Bit Score: 35.39 E-value: 4.23e-03
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VirB11-like_ATPase | cd01130 | Type IV secretory pathway component VirB11-like; Type IV secretory pathway component VirB11, ... |
2-21 | 8.22e-03 | ||||
Type IV secretory pathway component VirB11-like; Type IV secretory pathway component VirB11, and related ATPases. The homohexamer, VirB11 is one of eleven Vir (virulence) proteins, which are required for T-pilus biogenesis and virulence in the transfer of T-DNA from the bacterial Ti (tumor-inducing)-plasmid into plant cells. The pilus is a fibrous cell surface organelle, which mediates adhesion between bacteria during conjugative transfer or between bacteria and host eukaryotic cells during infection. VirB11-related ATPases include Sulfolobus acidocaldarius FlaI, which plays key roles in archaellum (archaeal flagellum) assembly and motility functions, and the pilus assembly proteins CpaF/TadA and TrbB. This alignment contains the C-terminal domain, which is the ATPase. Pssm-ID: 410874 [Multi-domain] Cd Length: 177 Bit Score: 34.82 E-value: 8.22e-03
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Blast search parameters | ||||
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