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Conserved domains on  [gi|489612307|ref|WP_003516748|]
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MULTISPECIES: F0F1 ATP synthase subunit gamma [Rhizobium/Agrobacterium group]

Protein Classification

FoF1 ATP synthase subunit gamma( domain architecture ID 10792582)

FoF1 ATP synthase subunit gamma is part of the catalytic core of the F-type ATPase that produces ATP from ADP in the presence of a proton gradient across the membrane

EC:  7.1.2.2
Gene Ontology:  GO:0045261|GO:0005524|GO:0046933|GO:0042777
PubMed:  25730883|30888962|25667968|18216260|8951091
SCOP:  4000503

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK05621 PRK05621
F0F1 ATP synthase subunit gamma; Validated
 1-292 1.81e-134

F0F1 ATP synthase subunit gamma; Validated


:

Pssm-ID: 235535  Cd Length: 284  Bit Score: 381.77  E-value: 1.81e-134
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489612307   1 MPSLKDLKNRIASVKATQKITKAMKMVAAAKLRRAQEAAEAARPYSQRMGAVLANIAKAVEADvaPALMTGTGkDNVHLL 80
Cdd:PRK05621   1 MASLKEIRRRIKSVKNTQKITKAMEMVAASKLRKAQERAEASRPYAEKIRKVISHLASASEYD--HPLLVERE-VKRVGY 77

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489612307  81 VVCTAERGLCGGFNSQISRFARDQARKLISEGKTVKIITVGKKGYDSLRREFAanIIERIELREVKKVGFENADQIAKKV 160
Cdd:PRK05621  78 IVVTSDRGLCGGYNSNIIKKVLELIKELEAQGKEVKLIVIGRKGVDFFKRRGI--NVVAEYTGLGDQPTFEEAIGIAKKL 155

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489612307 161 ISLFNAGEFDVCTLIYSEFKSVISQIPTGLQLIPAavpVVEEVEATQSAVYEYEPDAASILEDLIPRNISVQVFRALLEN 240
Cdd:PRK05621 156 LDAYDNGEFDELYIVYNKFVNTLSQEPTVEQLLPL---EKEEEEEETSWDYEYEPDAEEILDALLPRYVESQIYQALLEN 232

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|..
gi 489612307 241 VAGEMGAKMSAMDNATRNAGDMINKLTLSYNRQRQAQITKELIEIISGAEAL 292
Cdd:PRK05621 233 KASEQAARMTAMKNATDNAGDLIKKLTLVYNRARQAAITQEITEIVGGAEAL 284
 
Name Accession Description Interval E-value
PRK05621 PRK05621
F0F1 ATP synthase subunit gamma; Validated
 1-292 1.81e-134

F0F1 ATP synthase subunit gamma; Validated


Pssm-ID: 235535  Cd Length: 284  Bit Score: 381.77  E-value: 1.81e-134
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489612307   1 MPSLKDLKNRIASVKATQKITKAMKMVAAAKLRRAQEAAEAARPYSQRMGAVLANIAKAVEADvaPALMTGTGkDNVHLL 80
Cdd:PRK05621   1 MASLKEIRRRIKSVKNTQKITKAMEMVAASKLRKAQERAEASRPYAEKIRKVISHLASASEYD--HPLLVERE-VKRVGY 77

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489612307  81 VVCTAERGLCGGFNSQISRFARDQARKLISEGKTVKIITVGKKGYDSLRREFAanIIERIELREVKKVGFENADQIAKKV 160
Cdd:PRK05621  78 IVVTSDRGLCGGYNSNIIKKVLELIKELEAQGKEVKLIVIGRKGVDFFKRRGI--NVVAEYTGLGDQPTFEEAIGIAKKL 155

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489612307 161 ISLFNAGEFDVCTLIYSEFKSVISQIPTGLQLIPAavpVVEEVEATQSAVYEYEPDAASILEDLIPRNISVQVFRALLEN 240
Cdd:PRK05621 156 LDAYDNGEFDELYIVYNKFVNTLSQEPTVEQLLPL---EKEEEEEETSWDYEYEPDAEEILDALLPRYVESQIYQALLEN 232

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|..
gi 489612307 241 VAGEMGAKMSAMDNATRNAGDMINKLTLSYNRQRQAQITKELIEIISGAEAL 292
Cdd:PRK05621 233 KASEQAARMTAMKNATDNAGDLIKKLTLVYNRARQAAITQEITEIVGGAEAL 284
AtpG COG0224
FoF1-type ATP synthase, gamma subunit [Energy production and conversion]; FoF1-type ATP ...
 1-292 1.36e-129

FoF1-type ATP synthase, gamma subunit [Energy production and conversion]; FoF1-type ATP synthase, gamma subunit is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 439994  Cd Length: 288  Bit Score: 369.48  E-value: 1.36e-129
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489612307   1 MPSLKDLKNRIASVKATQKITKAMKMVAAAKLRRAQEAAEAARPYSQRMGAVLANIAKAVEaDVAPALMTGTgKDNVHLL 80
Cdd:COG0224    1 MASLKEIRRRIKSVKSTQKITKAMKMVAASKLRKAQERAEAARPYAEKLREVLAALAAASP-EYDHPLLEER-EVKRVGL 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489612307  81 VVCTAERGLCGGFNSQISRFARDQARKLISEGKTVKIITVGKKGYDSLRREFAANIIERIELREvkKVGFENADQIAKKV 160
Cdd:COG0224   79 IVITSDRGLCGGFNSNVLKAAEELIKELQAEGKEVELIVVGRKGRDFFKRRGINVVAEFTGLSD--KPSFEDAKEIAEEL 156

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489612307 161 ISLFNAGEFDVCTLIYSEFKSVISQIPTGLQLIPAAVPVVEEVEATQSAVYEYEPDAASILEDLIPRNISVQVFRALLEN 240
Cdd:COG0224  157 LDAFLAGEIDEVYLVYNRFVSAITQEPVVEQLLPLDPEELEEAEWETRADYIFEPSPEEILDALLPRYLESQIYQALLES 236

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|..
gi 489612307 241 VAGEMGAKMSAMDNATRNAGDMINKLTLSYNRQRQAQITKELIEIISGAEAL 292
Cdd:COG0224  237 AASEHAARMTAMKNATDNAGELIDDLTLEYNRARQAAITQELSEIVGGAEAL 288
ATP-synt pfam00231
ATP synthase;
3-291 4.53e-120

ATP synthase;


Pssm-ID: 459722  Cd Length: 285  Bit Score: 345.28  E-value: 4.53e-120
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489612307    3 SLKDLKNRIASVKATQKITKAMKMVAAAKLRRAQEAAEAARPYSQRMGAVLANIAKAVEADVAPalMTGTGKDNVHLLVV 82
Cdd:pfam00231   1 SLKEIKRRIKSVKSTQKITKAMKMVAAAKLRKAQEALEAARPYAEKLQEVLADLAAASPEDSHP--LLERREVKKVGLIV 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489612307   83 CTAERGLCGGFNSQISRFARDQARKLISEGKTVKIITVGKKGYDSLRREFAaNIIERIELREVKKVGFENADQIAKKVIS 162
Cdd:pfam00231  79 ITSDRGLCGGFNSNVIKAARALIEELLAEGKEVKLIVVGRKGRDYFKKRGY-EVILEFTGSLGDKPTFEEAAEIADELLD 157

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489612307  163 LFNAGEFDVCTLIYSEFKSVISQIPTGLQLIPAAvPVVEEVEATQSAVYEYEPDAASILEDLIPRNISVQVFRALLENVA 242
Cdd:pfam00231 158 AFLAGEIDEVYLVYNRFVSAISQEPTVEQLLPLD-PEEEEEEEESLADYEFEPSAEEVLDALLPRYLESQIYGALLESAA 236

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*....
gi 489612307  243 GEMGAKMSAMDNATRNAGDMINKLTLSYNRQRQAQITKELIEIISGAEA 291
Cdd:pfam00231 237 SEQAARMTAMDNATDNAGELIDKLTLQYNRARQAAITQELIEIVSGAEA 285
ATPsyn_F1gamma TIGR01146
ATP synthase, F1 gamma subunit; This model describes the ATP synthase gamma subunit in ...
 2-292 4.76e-105

ATP synthase, F1 gamma subunit; This model describes the ATP synthase gamma subunit in bacteria and its equivalents in organelles, namely, mitochondria and chloroplast. F1/F0-ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and organelles of higher eukaryotes, namely, mitochondria and chloroplast. This enzyme is principally involed in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. The gamma subunit is the part of F1 cluster. Surrounding the gamma subunit in a cylinder-like structure are three alpha and three subunits in an alternating fashion. This is the central catalytic unit whose different conformations permit the binding of ADP and inorganic phosphate and release of ATP. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273469  Cd Length: 286  Bit Score: 307.30  E-value: 4.76e-105
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489612307    2 PSLKDLKNRIASVKATQKITKAMKMVAAAKLRRAQEAAEAARPYSQRMGAVLANIAKAVEADVAPalMTGTGKDNVHLLV 81
Cdd:TIGR01146   1 ATLKEIRTRIKSVKNTQKITKAMKMVAASKLRRAQERAEAARPYAEKIRAVLGNLATKLLNVDHP--LLKSREVKKVGIL 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489612307   82 VCTAERGLCGGFNSQISRFARDQARKLISEGKTVKIITVGKKGYDSLRReFAANIIEriELREVKK-VGFENADQIAKKV 160
Cdd:TIGR01146  79 VITSDRGLCGGYNSNVLKRVRARAKELKAAGKEVKLVVIGRKGKSFFKR-RGDNIVL--SITGLSDqPTFEEASGIADKL 155

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489612307  161 ISLFNAGEFDVCTLIYSEFKSVISQIPTGLQLIPAAVPVVEEvEATQSAVYEYEPDAASILEDLIPRNISVQVFRALLEN 240
Cdd:TIGR01146 156 LDAFDAGEFDELYIVYNKFVSSISQEPTVKQLLPLSAQGPDE-GFKFSQDYIFEPDEEEILDDLLPRYLESQIYGALLES 234

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|..
gi 489612307  241 VAGEMGAKMSAMDNATRNAGDMINKLTLSYNRQRQAQITKELIEIISGAEAL 292
Cdd:TIGR01146 235 AASEQAARMTAMDNATDNAGDLIKKLTLSYNRARQAAITQELIEIVAGASAL 286
F1-ATPase_gamma cd12151
mitochondrial ATP synthase gamma subunit; The F-ATPase is found in bacterial plasma membranes, ...
 2-289 6.91e-101

mitochondrial ATP synthase gamma subunit; The F-ATPase is found in bacterial plasma membranes, mitochondrial inner membranes and in chloroplast thylakoid membranes. It has also been found in the archaea Methanosarcina barkeri. It uses a proton gradient to drive ATP synthesis and hydrolyzes ATP to build the proton gradient. The extrinisic membrane domain of F-ATPases is composed of alpha, beta, gamma, delta, and epsilon (not present in bacteria) subunits with a stoichiometry of 3:3:1:1:1. Alpha and beta subunit form the globular catalytic moiety, a hexameric ring of alternating subunits. Gamma, delta and epsilon subunits form a stalk, connecting F1 to F0, the integral membrane proton translocating domain.


Pssm-ID: 213394  Cd Length: 282  Bit Score: 296.80  E-value: 6.91e-101
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489612307   2 PSLKDLKNRIASVKATQKITKAMKMVAAAKLRRAQEAAEAARPYSQRMGAVLANIAKAVEADVAPALMTGTGKdnVHLLV 81
Cdd:cd12151    1 ASLKEIKRRIKSVKNTQKITKAMKMVAAAKLRKAQRALEAARPYAEKLEEVLQRLLSSLDDEDPPLLEKREVK--KVLLI 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489612307  82 VCTAERGLCGGFNSQISRFARDQARKliSEGKTVKIITVGKKGYDSLRREFAaNIIERIELREvKKVGFENADQIAKKVI 161
Cdd:cd12151   79 VITSDRGLCGGFNSNIIKAAEELIKE--ADGKEVKLIVVGKKGRDYLKRRGY-NIALPFSDIG-DDPTYFEAASIIEELI 154

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489612307 162 SLFNAGEFDVCTLIYSEFKSVISQIPTGLQLIPAAVPVVEEVEATQSAVYEYEPDAASILEDLIPRNISVQVFRALLENV 241
Cdd:cd12151  155 LDFLNGEIDEVYIIYNKFKSAISQEPVVEQLLPLDKEEEEEESEGSRSDYIFEPDPEEVLDALLPFYLASLLYRALLESL 234

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*...
gi 489612307 242 AGEMGAKMSAMDNATRNAGDMINKLTLSYNRQRQAQITKELIEIISGA 289
Cdd:cd12151  235 ASEQAARMTAMDNATDNAGELIDKLTLEYNRARQAAITQELIEIVSGA 282
 
Name Accession Description Interval E-value
PRK05621 PRK05621
F0F1 ATP synthase subunit gamma; Validated
 1-292 1.81e-134

F0F1 ATP synthase subunit gamma; Validated


Pssm-ID: 235535  Cd Length: 284  Bit Score: 381.77  E-value: 1.81e-134
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489612307   1 MPSLKDLKNRIASVKATQKITKAMKMVAAAKLRRAQEAAEAARPYSQRMGAVLANIAKAVEADvaPALMTGTGkDNVHLL 80
Cdd:PRK05621   1 MASLKEIRRRIKSVKNTQKITKAMEMVAASKLRKAQERAEASRPYAEKIRKVISHLASASEYD--HPLLVERE-VKRVGY 77

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489612307  81 VVCTAERGLCGGFNSQISRFARDQARKLISEGKTVKIITVGKKGYDSLRREFAanIIERIELREVKKVGFENADQIAKKV 160
Cdd:PRK05621  78 IVVTSDRGLCGGYNSNIIKKVLELIKELEAQGKEVKLIVIGRKGVDFFKRRGI--NVVAEYTGLGDQPTFEEAIGIAKKL 155

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489612307 161 ISLFNAGEFDVCTLIYSEFKSVISQIPTGLQLIPAavpVVEEVEATQSAVYEYEPDAASILEDLIPRNISVQVFRALLEN 240
Cdd:PRK05621 156 LDAYDNGEFDELYIVYNKFVNTLSQEPTVEQLLPL---EKEEEEEETSWDYEYEPDAEEILDALLPRYVESQIYQALLEN 232

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|..
gi 489612307 241 VAGEMGAKMSAMDNATRNAGDMINKLTLSYNRQRQAQITKELIEIISGAEAL 292
Cdd:PRK05621 233 KASEQAARMTAMKNATDNAGDLIKKLTLVYNRARQAAITQEITEIVGGAEAL 284
AtpG COG0224
FoF1-type ATP synthase, gamma subunit [Energy production and conversion]; FoF1-type ATP ...
 1-292 1.36e-129

FoF1-type ATP synthase, gamma subunit [Energy production and conversion]; FoF1-type ATP synthase, gamma subunit is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 439994  Cd Length: 288  Bit Score: 369.48  E-value: 1.36e-129
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489612307   1 MPSLKDLKNRIASVKATQKITKAMKMVAAAKLRRAQEAAEAARPYSQRMGAVLANIAKAVEaDVAPALMTGTgKDNVHLL 80
Cdd:COG0224    1 MASLKEIRRRIKSVKSTQKITKAMKMVAASKLRKAQERAEAARPYAEKLREVLAALAAASP-EYDHPLLEER-EVKRVGL 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489612307  81 VVCTAERGLCGGFNSQISRFARDQARKLISEGKTVKIITVGKKGYDSLRREFAANIIERIELREvkKVGFENADQIAKKV 160
Cdd:COG0224   79 IVITSDRGLCGGFNSNVLKAAEELIKELQAEGKEVELIVVGRKGRDFFKRRGINVVAEFTGLSD--KPSFEDAKEIAEEL 156

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489612307 161 ISLFNAGEFDVCTLIYSEFKSVISQIPTGLQLIPAAVPVVEEVEATQSAVYEYEPDAASILEDLIPRNISVQVFRALLEN 240
Cdd:COG0224  157 LDAFLAGEIDEVYLVYNRFVSAITQEPVVEQLLPLDPEELEEAEWETRADYIFEPSPEEILDALLPRYLESQIYQALLES 236

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|..
gi 489612307 241 VAGEMGAKMSAMDNATRNAGDMINKLTLSYNRQRQAQITKELIEIISGAEAL 292
Cdd:COG0224  237 AASEHAARMTAMKNATDNAGELIDDLTLEYNRARQAAITQELSEIVGGAEAL 288
ATP-synt pfam00231
ATP synthase;
3-291 4.53e-120

ATP synthase;


Pssm-ID: 459722  Cd Length: 285  Bit Score: 345.28  E-value: 4.53e-120
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489612307    3 SLKDLKNRIASVKATQKITKAMKMVAAAKLRRAQEAAEAARPYSQRMGAVLANIAKAVEADVAPalMTGTGKDNVHLLVV 82
Cdd:pfam00231   1 SLKEIKRRIKSVKSTQKITKAMKMVAAAKLRKAQEALEAARPYAEKLQEVLADLAAASPEDSHP--LLERREVKKVGLIV 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489612307   83 CTAERGLCGGFNSQISRFARDQARKLISEGKTVKIITVGKKGYDSLRREFAaNIIERIELREVKKVGFENADQIAKKVIS 162
Cdd:pfam00231  79 ITSDRGLCGGFNSNVIKAARALIEELLAEGKEVKLIVVGRKGRDYFKKRGY-EVILEFTGSLGDKPTFEEAAEIADELLD 157

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489612307  163 LFNAGEFDVCTLIYSEFKSVISQIPTGLQLIPAAvPVVEEVEATQSAVYEYEPDAASILEDLIPRNISVQVFRALLENVA 242
Cdd:pfam00231 158 AFLAGEIDEVYLVYNRFVSAISQEPTVEQLLPLD-PEEEEEEEESLADYEFEPSAEEVLDALLPRYLESQIYGALLESAA 236

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*....
gi 489612307  243 GEMGAKMSAMDNATRNAGDMINKLTLSYNRQRQAQITKELIEIISGAEA 291
Cdd:pfam00231 237 SEQAARMTAMDNATDNAGELIDKLTLQYNRARQAAITQELIEIVSGAEA 285
ATPsyn_F1gamma TIGR01146
ATP synthase, F1 gamma subunit; This model describes the ATP synthase gamma subunit in ...
 2-292 4.76e-105

ATP synthase, F1 gamma subunit; This model describes the ATP synthase gamma subunit in bacteria and its equivalents in organelles, namely, mitochondria and chloroplast. F1/F0-ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and organelles of higher eukaryotes, namely, mitochondria and chloroplast. This enzyme is principally involed in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. The gamma subunit is the part of F1 cluster. Surrounding the gamma subunit in a cylinder-like structure are three alpha and three subunits in an alternating fashion. This is the central catalytic unit whose different conformations permit the binding of ADP and inorganic phosphate and release of ATP. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273469  Cd Length: 286  Bit Score: 307.30  E-value: 4.76e-105
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489612307    2 PSLKDLKNRIASVKATQKITKAMKMVAAAKLRRAQEAAEAARPYSQRMGAVLANIAKAVEADVAPalMTGTGKDNVHLLV 81
Cdd:TIGR01146   1 ATLKEIRTRIKSVKNTQKITKAMKMVAASKLRRAQERAEAARPYAEKIRAVLGNLATKLLNVDHP--LLKSREVKKVGIL 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489612307   82 VCTAERGLCGGFNSQISRFARDQARKLISEGKTVKIITVGKKGYDSLRReFAANIIEriELREVKK-VGFENADQIAKKV 160
Cdd:TIGR01146  79 VITSDRGLCGGYNSNVLKRVRARAKELKAAGKEVKLVVIGRKGKSFFKR-RGDNIVL--SITGLSDqPTFEEASGIADKL 155

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489612307  161 ISLFNAGEFDVCTLIYSEFKSVISQIPTGLQLIPAAVPVVEEvEATQSAVYEYEPDAASILEDLIPRNISVQVFRALLEN 240
Cdd:TIGR01146 156 LDAFDAGEFDELYIVYNKFVSSISQEPTVKQLLPLSAQGPDE-GFKFSQDYIFEPDEEEILDDLLPRYLESQIYGALLES 234

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|..
gi 489612307  241 VAGEMGAKMSAMDNATRNAGDMINKLTLSYNRQRQAQITKELIEIISGAEAL 292
Cdd:TIGR01146 235 AASEQAARMTAMDNATDNAGDLIKKLTLSYNRARQAAITQELIEIVAGASAL 286
PRK13423 PRK13423
F0F1 ATP synthase subunit gamma; Provisional
 1-292 5.18e-105

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 237384  Cd Length: 288  Bit Score: 307.37  E-value: 5.18e-105
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489612307   1 MPSLKDLKNRIASVKATQKITKAMKMVAAAKLRRAQEAAEAARPYSQRMGAVLANIAKAVEADVAPaLMTGTGKDNVhLL 80
Cdd:PRK13423   1 MASLKDIKKRIVSVKNTRQITKAMKMVSAAKLRRAQENVVAARPYAAKLGEVLGSLAARAGEDAHP-LLVPREVKKA-LL 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489612307  81 VVCTAERGLCGGFNSQISRFARDQARKLISEGKTVKIITVGKKGYDSLRREfaANIIERIELREVKKVGFENADQIAKKV 160
Cdd:PRK13423  79 VVVTSDRGLCGGFNSNLCKAAERFLKENKDEFEEISLTTVGRKGREFLKNR--GLIIRKNYGGVVANLTYETAALLAQEL 156

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489612307 161 ISLFNAGEFDVCTLIYSEFKSVISQIPTGLQLIPAAVPVVEEVEAtqSAVYEYEPDAASILEDLIPRNISVQVFRALLEN 240
Cdd:PRK13423 157 IEGYLAGEYDEVYLVYNEFKSVMSQDITVQQLLPIDPPEAADDEY--LPEYIYEPSRDALLAELLPKHVEVQIYRALLES 234

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|..
gi 489612307 241 VAGEMGAKMSAMDNATRNAGDMINKLTLSYNRQRQAQITKELIEIISGAEAL 292
Cdd:PRK13423 235 VASEHGARMTAMDSATKNATEMIGKLTLQYNRARQAAITTELMEIVSGAEAL 286
F1-ATPase_gamma cd12151
mitochondrial ATP synthase gamma subunit; The F-ATPase is found in bacterial plasma membranes, ...
 2-289 6.91e-101

mitochondrial ATP synthase gamma subunit; The F-ATPase is found in bacterial plasma membranes, mitochondrial inner membranes and in chloroplast thylakoid membranes. It has also been found in the archaea Methanosarcina barkeri. It uses a proton gradient to drive ATP synthesis and hydrolyzes ATP to build the proton gradient. The extrinisic membrane domain of F-ATPases is composed of alpha, beta, gamma, delta, and epsilon (not present in bacteria) subunits with a stoichiometry of 3:3:1:1:1. Alpha and beta subunit form the globular catalytic moiety, a hexameric ring of alternating subunits. Gamma, delta and epsilon subunits form a stalk, connecting F1 to F0, the integral membrane proton translocating domain.


Pssm-ID: 213394  Cd Length: 282  Bit Score: 296.80  E-value: 6.91e-101
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489612307   2 PSLKDLKNRIASVKATQKITKAMKMVAAAKLRRAQEAAEAARPYSQRMGAVLANIAKAVEADVAPALMTGTGKdnVHLLV 81
Cdd:cd12151    1 ASLKEIKRRIKSVKNTQKITKAMKMVAAAKLRKAQRALEAARPYAEKLEEVLQRLLSSLDDEDPPLLEKREVK--KVLLI 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489612307  82 VCTAERGLCGGFNSQISRFARDQARKliSEGKTVKIITVGKKGYDSLRREFAaNIIERIELREvKKVGFENADQIAKKVI 161
Cdd:cd12151   79 VITSDRGLCGGFNSNIIKAAEELIKE--ADGKEVKLIVVGKKGRDYLKRRGY-NIALPFSDIG-DDPTYFEAASIIEELI 154

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489612307 162 SLFNAGEFDVCTLIYSEFKSVISQIPTGLQLIPAAVPVVEEVEATQSAVYEYEPDAASILEDLIPRNISVQVFRALLENV 241
Cdd:cd12151  155 LDFLNGEIDEVYIIYNKFKSAISQEPVVEQLLPLDKEEEEEESEGSRSDYIFEPDPEEVLDALLPFYLASLLYRALLESL 234

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*...
gi 489612307 242 AGEMGAKMSAMDNATRNAGDMINKLTLSYNRQRQAQITKELIEIISGA 289
Cdd:cd12151  235 ASEQAARMTAMDNATDNAGELIDKLTLEYNRARQAAITQELIEIVSGA 282
PRK13424 PRK13424
F0F1 ATP synthase subunit gamma; Provisional
 1-292 4.19e-85

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 172047  Cd Length: 291  Bit Score: 256.98  E-value: 4.19e-85
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489612307   1 MPSLKDLKNRIASVKATQKITKAMKMVAAAKLRRAQEAAEAARPYSQRMGAVLANIAKAVEADVAPALMTGTGKDNVhLL 80
Cdd:PRK13424   1 MPSLKDVKVKIAGVKKTKQITKAMNMVASAKLRGAQQRIERFRPYAEKFYDMLGDLASRADSSAHPLLEVREEIKTC-GI 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489612307  81 VVCTAERGLCGGFNSQISRFARDQARKLISEGKTVKIITVGKKGYDSLRR---EFAANIIErielrEVKKVGFENADQIA 157
Cdd:PRK13424  80 VLITSDRGLCGSFNANLINAALKLAKQKTAEGKTVKFYCVGKKGRDAIRKtdfEIVTAYAD-----QMTSFDFQLANSIG 154

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489612307 158 KKVISLFNAGEFDVCTLIYSEFKSVISQIPTGLQLIPAAVPVVEEVEATQSAVYEYEPDAASILEDLIPRNISVQVFRAL 237
Cdd:PRK13424 155 LEVIDGYLTGELDEVVLVYGEFVSMARQLPITLQILPIAPEEAEEEEAGASSEYIYEPSVEGLLAELLPRFIKVQIYRGL 234

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 489612307 238 LENVAGEMGAKMSAMDNATRNAGDMINKLTLSYNRQRQAQITKELIEIISGAEAL 292
Cdd:PRK13424 235 LDTSASEHAARMTAMDNATRNCDDMIGSLTLLYNKTRQASITRELMDIVGGAEAL 289
PRK14111 PRK14111
F0F1 ATP synthase subunit gamma; Provisional
 1-292 5.00e-67

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 184515  Cd Length: 290  Bit Score: 210.81  E-value: 5.00e-67
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489612307   1 MPSLKDLKNRIASVKATQKITKAMKMVAAAKLRRAQEAAEAARPYSQRMGAVLANIAKAV--EADVAPALMTGTGKDNVH 78
Cdd:PRK14111   1 MPSTREIRRRIRSVKNTAQITRAMEMVSASKMRRAQRNVLATRPYADRIRDVMGDLTARTvgAARVGPLLEKRPTVKRVA 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489612307  79 LLVVcTAERGLCGGFNSQISRFARDQARKLISEGKTVKIITVGKKGYDSLRREFAANIIERIELREVKKVgfENADQIAK 158
Cdd:PRK14111  81 LILV-TPDRGLAGSLNANVLRRAIRFITDERSMGRTVDVIAIGRKGRDFMVRTGQALVAEFTRLGDAPKL--EAILPVAT 157

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489612307 159 KVISLFNAGEFDVCTLIYSEFKSVISQIPTGLQLIPAAVPvveEVEATQSAVYEYEPDAASILEDLIPRNISVQVFRALL 238
Cdd:PRK14111 158 SAINGFQSGKYDEVYVLYSEFINTLVQRPTIKQLLPIEPP---EISTTTVVDYTYEPSPEEVLRALLPRFVEVQLYQAVL 234

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....
gi 489612307 239 ENVAGEMGAKMSAMDNATRNAGDMINKLTLSYNRQRQAQITKELIEIISGAEAL 292
Cdd:PRK14111 235 ESIASEHSARMVAMRNATDNAKELVRDLTLTYNKARQAAITKEVSEIASGAAAL 288
PRK13425 PRK13425
F0F1 ATP synthase subunit gamma; Provisional
 1-292 1.95e-65

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 139564  Cd Length: 291  Bit Score: 206.59  E-value: 1.95e-65
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489612307   1 MPSLKDLKNRIASVKATQKITKAMKMVAAAKLRRAQEAAEAARPYSQRMGAVLANIAKAVEADVAPaLMTGTGKDNVHLL 80
Cdd:PRK13425   1 MPTLKDIRVRIKGVKSTQQVTKAMKMVAAAKLRRAQERAIMARPYAAKLKEMLGSLSAKVDTSLNP-LLSPRSEVNKVLV 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489612307  81 VVCTAERGLCGGFNSQISRFARdqarKLISE--------GKtVKIITVGKKGYDSLR-REFaaNIIERIElREVKKVGFE 151
Cdd:PRK13425  80 ILITSDRGLCGAFNTNIIKLAQ----KVIHEdyaalhakGG-VSMICAGTRGFDFFRkRGY--NIVKGYP-GVFQNLDFS 151

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489612307 152 NADQIAKKVISLFNAGEFDVCTLIYSEFKSVISQIPTGLQLIPAAVpvvEEVEATQSAVYEYEPDAASILEDLIPRNISV 231
Cdd:PRK13425 152 VAKEIAETASGMYLRGEVDKVVVVYNEFKSVLAPNLKSEVLLPITP---EKPGAEGGSDYIYEPSPAAIIDELVPKHLNT 228

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 489612307 232 QVFRALLENVAGEMGAKMSAMDNATRNAGDMINKLTLSYNRQRQAQITKELIEIISGAEAL 292
Cdd:PRK13425 229 QVWRMMLESNAAEQAARMTAMDSATENAKELLRTLNISYNRARQAAITKELSEIVAGADAL 289
PRK13426 PRK13426
F0F1 ATP synthase subunit gamma; Provisional
 1-292 1.88e-57

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 237385  Cd Length: 291  Bit Score: 186.14  E-value: 1.88e-57
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489612307   1 MPSLKDLKNRIASVKATQKITKAMKMVAAAKLRRAQEAAEAARPYSQRMGAVLANIAKAvEADVAPALMTGTGKDNVhLL 80
Cdd:PRK13426   1 MASLKEIKTRIASVQSTRKITSAMKMVASAKLHKAQGAIENMLPYQRKLNHILTNFLSA-DLDVESPFTVERPVKRV-AI 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489612307  81 VVCTAERGLCGGFNSQISRfardQARKLISEGKT-----VKIITVGKKGYDSLRR---EFAANIIERIElrevkKVGFEN 152
Cdd:PRK13426  79 VVFSSNTSLCGGFNANIIK----LLLQTIGEYRTlgqdnILIYPVGKKIEEAVKKlgfKVQGDYQTLAD-----KPSYEE 149

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489612307 153 ADQIAKKVISLFNAGEFDVCTLIYSEFKSVISQIPTGLQLIPAAVPVVEEVEATQSAVYEY--EPDAASILEDLIPRNIS 230
Cdd:PRK13426 150 AAALAMRLMELFLEGEIDKVELIYHHFKSMGVQVLTRETYLPIDLSQEKNAEHAGGVANDYiiEPSADTVLNDLIPKLLS 229

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 489612307 231 VQVFRALLENVAGEMGAKMSAMDNATRNAGDMINKLTLSYNRQRQAQITKELIEIISGAEAL 292
Cdd:PRK13426 230 LKIYTALLDSNASEHAARMVAMQIATDNANELLQELTLQYNKSRQQAITNELLDIVGGSMAN 291
PRK13427 PRK13427
F0F1 ATP synthase subunit gamma; Provisional
 1-292 8.72e-57

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 172049  Cd Length: 289  Bit Score: 184.37  E-value: 8.72e-57
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489612307   1 MPSLKDLKNRIASVKATQKITKAMKMVAAAKLRRAQEAAEAARPYSQRMGAVLANIAKAVEADVAPALMTGTGKDNVHLL 80
Cdd:PRK13427   1 MATPREIKKRINSVKNTRKITRTMEMVSTAKSKKATDRVNAAHPYANKIKELVSSLASLEGVVHSPYLRRPEKIRTVALL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489612307  81 VVcTAERGLCGGFNSQISRFARDQARKLISEGKTVKIITVGKKGYDSLRreFAANIIERIELREVKKVGFENADQIAKKV 160
Cdd:PRK13427  81 II-TANRGLCGGFNSNLNRMAKARIAELKKKGVNVELHIVGKKGISFFK--FAGEKAEKTYTHIDDKSGYKEAEELANLF 157

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489612307 161 ISLFNAGEFDVCTLIYSEFKSVISQIPTGLQLIPAAvPVVEEVEATQSAVYEYEPDAASILEDLIPRNISVQVFRALLEN 240
Cdd:PRK13427 158 MERFANESVDAVEIASTVYYSAASQKPETTRVLPLE-PPTAAAEGSVQDDVVYEPSPEAILESLLPLVVKTAFLKAILEA 236

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|..
gi 489612307 241 VAGEMGAKMSAMDNATRNAGDMINKLTLSYNRQRQAQITKELIEIISGAEAL 292
Cdd:PRK13427 237 NASEQIARRIAMKSATDAASEMIKLLTRGYNRVRQAKITQEISEIVGGADAL 288
PRK14110 PRK14110
F0F1 ATP synthase subunit gamma; Provisional
 1-292 9.87e-56

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 184514  Cd Length: 291  Bit Score: 181.89  E-value: 9.87e-56
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489612307   1 MPSL--KDLKNRIASVKATQKITKAMKMVAAAKLRRAQEAAEAARPYSQRMGAVLANIAKAVEADVAPALMTGTGKdNVH 78
Cdd:PRK14110   1 MAKLspRDIKRKIQGIKNTRRITNAMKVVSAAKLRKAQELLYASRPYSEKLYELISDLAAHIDRESHPLLERREEK-NVD 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489612307  79 LLVVcTAERGLCGGFNSQISRFARDQARKLISEGKTVKIITVGKKGYDSLRREfAANIIERIELREVKKVGFENADQIAK 158
Cdd:PRK14110  80 LVII-TADRGLAGAFNSNVIKTAERLIQEKQSEGVRVNLILIGRKGVQYFSKR-GYNIIKSYEDVFRKEINFSVVKEVGG 157

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489612307 159 KVISLFNAGEFDVCTLIYSEFKSVISQIPTGLQLIPAAvPVVEEVEATQSAVYEYEPDAASILEDLIPRNISVQVFRALL 238
Cdd:PRK14110 158 ILASRYIEEETDAVYLINNEMITRATYKPKVRKFLPFE-VEAQEKKLDELSVYNIEVSEEEFLDKLLQLYLNYQLYRALV 236

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....
gi 489612307 239 ENVAGEMGAKMSAMDNATRNAGDMINKLTLSYNRQRQAQITKELIEIISGAEAL 292
Cdd:PRK14110 237 ESNAAEHFARMVAMDNATRNAGELIRKWTLIFNKARQEAITTELIDIVNAAEAM 290
PRK13422 PRK13422
F0F1 ATP synthase subunit gamma; Provisional
 1-292 1.12e-34

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 184046  Cd Length: 298  Bit Score: 127.09  E-value: 1.12e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489612307   1 MPSLKDLKNRIASVKATQKITKAMKMVAAAKLRRAQEAAEAARPYSQRMGAVLANIAKAVEADVAPALMTGTGKDNVHll 80
Cdd:PRK13422   1 MSNAREIRSKVQSVKNTQKITGAMELVAASKMRGAIVKMNNVRPYVESANTIIKNVTAASIDYPNPYLFDRDVKRVGY-- 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489612307  81 VVCTAERGLCGGFNSQISRFARDQARKLISEGKTVKIITVGKKGYDSLRREFAANIIERIELREVKKVGFENADQIAKKV 160
Cdd:PRK13422  79 IVTSTDRGLCGGLNINLFKHVLKEIKNNIEDRVGVDVCVIGSKAENFFAKLKDVNIVATAHYNDKDKEGSIRAIGGAVKV 158

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489612307 161 -ISLFNAGEFDVCTLIYSEFKSVISQIPTGLQLIPAA-VPVVEEVEATQSAV------YEYEPDAASILEDLIPRNISVQ 232
Cdd:PRK13422 159 mLDKFTAGEIDRLYMSSNQFVSTIKQRPRLQTLLPIQdIFSAEEIKANKEKAtkghwdYIYERDIEEVLNALCIRYIEAQ 238

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 489612307 233 VFRALLENVAGEMGAKMSAMDNATRNAGDMINKLTLSYNRQRQAQITKELIEIISGAEAL 292
Cdd:PRK13422 239 VRGAILENAACEQAARMMAMKNATDNASDIIDQLKLDYNKVRQAMITQELAEICSGAAAV 298
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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