|
Name |
Accession |
Description |
Interval |
E-value |
| SpoU |
COG0566 |
tRNA G18 (ribose-2'-O)-methylase SpoU [Translation, ribosomal structure and biogenesis]; tRNA ... |
21-280 |
7.82e-91 |
|
tRNA G18 (ribose-2'-O)-methylase SpoU [Translation, ribosomal structure and biogenesis]; tRNA G18 (ribose-2'-O)-methylase SpoU is part of the Pathway/BioSystem: tRNA modification
Pssm-ID: 440332 [Multi-domain] Cd Length: 265 Bit Score: 270.14 E-value: 7.82e-91
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489623269 21 VTSLTNPIVKDIRALTQKKHRDETRSFMAEGLKLVIDALDLGWKIKTLVYAKAAKGKpqVEQVAAKTVARGGLVLEVNEK 100
Cdd:COG0566 1 MTSPSNPRVKDLRKLRDKKYREEEGLFLAEGRHAVEEALKAGREIEELLVTEGALDR--LAELLALAKAAGIPVYEVSRE 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489623269 101 VISTITRRDNPQMVVGIFEQ-RYSPLRDIHPQEGET--YVALDRVRDPGNLGTIIRTADAAGASGIILVGETTDPFSLET 177
Cdd:COG0566 79 VLDKLSGTETHQGVLAVVRPpEYADLEDLLAEAGEPplLLVLDGVQDPGNLGAILRSAAAFGVDGVILPKRRADPYNPKV 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489623269 178 VRATMGSVFAIPIAR-ANTEDFIRWQRAAGVQVVATHLAGSVDYRTIDYKsKPVVLLMGNEQAGLPVELAREAGALARIP 256
Cdd:COG0566 159 VRASAGALFHVPVARvTNLADALEELKEAGFWVVGTDLDGEASLYEVDLP-GPVALVLGNEGKGLSRLVLEACDELVRIP 237
|
250 260
....*....|....*....|....
gi 489623269 257 QAGRADSLNLAIATGIMLFEARRH 280
Cdd:COG0566 238 MAGGVESLNVAVAAAILLYEAARQ 261
|
|
| SpoU-like_rRNA-MTase |
cd18095 |
SAM-dependent rRNA methylase related to SpoU-TrmH; RNA 2'-O ribose methyltransferase catalyzes ... |
136-277 |
2.65e-58 |
|
SAM-dependent rRNA methylase related to SpoU-TrmH; RNA 2'-O ribose methyltransferase catalyzes the methyltransfer from S-adenosyl-L-methionine (AdoMet) to the 2'-OH group of ribose in tRNA or rRNA. It is part of the SpoU family of MTases, a subfamily of the SPOUT methyltransferase superfamily. The SPOUT methyltransferase superfamily is a large class of S-adenosyl-L-methionine (AdoMet or SAM)-dependent RNA MTases which are structurally characterized by a deep trefoil knot.
Pssm-ID: 349968 Cd Length: 143 Bit Score: 183.01 E-value: 2.65e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489623269 136 YVALDRVRDPGNLGTIIRTADAAGASGIILVGETTDPFSLETVRATMGSVFAIPIARA-NTEDFIRWQRAAGVQVVATHL 214
Cdd:cd18095 2 VLVLDGVQDPGNLGTIIRTAAAFGVDGVILSKGTVDPYNPKVVRASMGALFRLPIIRVdDLEELLEELKEAGYKVVAADL 81
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 489623269 215 AGSVDYRTIDYKsKPVVLLMGNEQAGLPVELAREAGALARIPQAGRADSLNLAIATGIMLFEA 277
Cdd:cd18095 82 DGGSSLYDLDLP-KPVALVLGNEGNGLSDELLELCDKRVTIPMSGGVESLNVAVAAAILLYEL 143
|
|
| SpoU_methylase |
pfam00588 |
SpoU rRNA Methylase family; This family of proteins probably use S-AdoMet. |
136-275 |
1.29e-43 |
|
SpoU rRNA Methylase family; This family of proteins probably use S-AdoMet.
Pssm-ID: 425768 Cd Length: 142 Bit Score: 145.37 E-value: 1.29e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489623269 136 YVALDRVRDPGNLGTIIRTADAAGASGIILVGETT-DPFSLETVRATMGSVFAIPIAR-ANTEDFIRWQRAAGVQVVATH 213
Cdd:pfam00588 3 VVVLDNIQDPGNLGAIIRTAAAFGADGLILVEPRSaDPYNPKAIRASAGALFHLPLVVvDNLEEALKDLKEAGYAVVATS 82
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 489623269 214 LAGsVDYRTIDYKsKPVVLLMGNEQAGLPVELAREAGALARIPQAGRADSLNLAIATGIMLF 275
Cdd:pfam00588 83 LGG-KSLYEIDFP-KKVALVFGNEGTGLSNEVLELCDRLVRIPMSGDVESLNVAVAAAIALY 142
|
|
| rRNA_methyl_3 |
TIGR00186 |
rRNA methylase, putative, group 3; this is part of the trmH (spoU) family of rRNA methylases ... |
51-279 |
9.89e-29 |
|
rRNA methylase, putative, group 3; this is part of the trmH (spoU) family of rRNA methylases [Protein synthesis, tRNA and rRNA base modification]
Pssm-ID: 129290 [Multi-domain] Cd Length: 237 Bit Score: 109.74 E-value: 9.89e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489623269 51 GLKLVIDALDLGWKIKtlVYAKAAKGKPQ-VEQVAAKtvaRGGLVLEVNEKVISTITRRDNPQMVVGIFE-QRYSPLRDI 128
Cdd:TIGR00186 6 GKNAVLEALLNQQRVF--ILKGLESKRLKkLIQLAKK---QGINIQLVDRQKLDQLTKGGNHQGIAAKVKpILYKDLNDL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489623269 129 HP----QEGETYVALDRVRDPGNLGTIIRTADAAGASGIILVGETTDPFSLETVRATMGSVFAIPIAR-ANTEDFIRWQR 203
Cdd:TIGR00186 81 YKtaksKKQPFLLILDEITDPHNLGAILRTAEAFGVDGVILPKRRSAPLNSTVVKTSSGAVEYVPLARvTNLSRTITKLK 160
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 489623269 204 AAGVQVVAT-HLAGSVDYRTIDYKskPVVLLMGNEQAGLPVELAREAGALARIPQAGRADSLNLAIATGIMLFEARR 279
Cdd:TIGR00186 161 ESGFWTVGTdLDAQDTLYQVKLTK--PLALVVGNEGEGVSRLIKENCDFLIKIPMAGKVDSLNVSVAAGILLFEIKR 235
|
|
| PRK11081 |
PRK11081 |
tRNA guanosine-2'-O-methyltransferase; Provisional |
137-279 |
3.67e-19 |
|
tRNA guanosine-2'-O-methyltransferase; Provisional
Pssm-ID: 236837 [Multi-domain] Cd Length: 229 Bit Score: 83.89 E-value: 3.67e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489623269 137 VALDRVRDPGNLGTIIRTADAAGASGIILVGETTDpfsLETVRAT-MGSVFAIPIAR-ANTEDFIRWQRAAGVQVVATHL 214
Cdd:PRK11081 22 VCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR---MRTMGSTaAGSNSWVQVKThRTIGDAVAHLKGQGMQILATHL 98
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489623269 215 -AGSVDYRTIDYkSKPVVLLMGNEQAGlpveLAREAGALAR----IPQAGRADSLNLAIATGIMLFEARR 279
Cdd:PRK11081 99 sDTAVDFREIDY-TRPTCILMGQEKTG----ISQEALALADqdiiIPMIGMVQSLNVSVASALILYEAQR 163
|
|
| SpoU_sub_bind |
smart00967 |
RNA 2'-O ribose methyltransferase substrate binding; This domain is a RNA 2'-O ribose ... |
49-120 |
1.29e-08 |
|
RNA 2'-O ribose methyltransferase substrate binding; This domain is a RNA 2'-O ribose methyltransferase substrate binding domain.
Pssm-ID: 214943 [Multi-domain] Cd Length: 70 Bit Score: 50.61 E-value: 1.29e-08
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 489623269 49 AEGLKLVIDALDLGWKIKTLVYAKAAKGKPQVEQVAAKtvARGGLVLEVNEKVISTITRRDNPQMVVGIFEQ 120
Cdd:smart00967 1 IEGRHAVEEALKSGRRIKELYLTEGRAERLKELLKLAK--ERGIKVIEVSKKELDKLSGTANHQGVVAVVKP 70
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| SpoU |
COG0566 |
tRNA G18 (ribose-2'-O)-methylase SpoU [Translation, ribosomal structure and biogenesis]; tRNA ... |
21-280 |
7.82e-91 |
|
tRNA G18 (ribose-2'-O)-methylase SpoU [Translation, ribosomal structure and biogenesis]; tRNA G18 (ribose-2'-O)-methylase SpoU is part of the Pathway/BioSystem: tRNA modification
Pssm-ID: 440332 [Multi-domain] Cd Length: 265 Bit Score: 270.14 E-value: 7.82e-91
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489623269 21 VTSLTNPIVKDIRALTQKKHRDETRSFMAEGLKLVIDALDLGWKIKTLVYAKAAKGKpqVEQVAAKTVARGGLVLEVNEK 100
Cdd:COG0566 1 MTSPSNPRVKDLRKLRDKKYREEEGLFLAEGRHAVEEALKAGREIEELLVTEGALDR--LAELLALAKAAGIPVYEVSRE 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489623269 101 VISTITRRDNPQMVVGIFEQ-RYSPLRDIHPQEGET--YVALDRVRDPGNLGTIIRTADAAGASGIILVGETTDPFSLET 177
Cdd:COG0566 79 VLDKLSGTETHQGVLAVVRPpEYADLEDLLAEAGEPplLLVLDGVQDPGNLGAILRSAAAFGVDGVILPKRRADPYNPKV 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489623269 178 VRATMGSVFAIPIAR-ANTEDFIRWQRAAGVQVVATHLAGSVDYRTIDYKsKPVVLLMGNEQAGLPVELAREAGALARIP 256
Cdd:COG0566 159 VRASAGALFHVPVARvTNLADALEELKEAGFWVVGTDLDGEASLYEVDLP-GPVALVLGNEGKGLSRLVLEACDELVRIP 237
|
250 260
....*....|....*....|....
gi 489623269 257 QAGRADSLNLAIATGIMLFEARRH 280
Cdd:COG0566 238 MAGGVESLNVAVAAAILLYEAARQ 261
|
|
| SpoU-like_rRNA-MTase |
cd18095 |
SAM-dependent rRNA methylase related to SpoU-TrmH; RNA 2'-O ribose methyltransferase catalyzes ... |
136-277 |
2.65e-58 |
|
SAM-dependent rRNA methylase related to SpoU-TrmH; RNA 2'-O ribose methyltransferase catalyzes the methyltransfer from S-adenosyl-L-methionine (AdoMet) to the 2'-OH group of ribose in tRNA or rRNA. It is part of the SpoU family of MTases, a subfamily of the SPOUT methyltransferase superfamily. The SPOUT methyltransferase superfamily is a large class of S-adenosyl-L-methionine (AdoMet or SAM)-dependent RNA MTases which are structurally characterized by a deep trefoil knot.
Pssm-ID: 349968 Cd Length: 143 Bit Score: 183.01 E-value: 2.65e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489623269 136 YVALDRVRDPGNLGTIIRTADAAGASGIILVGETTDPFSLETVRATMGSVFAIPIARA-NTEDFIRWQRAAGVQVVATHL 214
Cdd:cd18095 2 VLVLDGVQDPGNLGTIIRTAAAFGVDGVILSKGTVDPYNPKVVRASMGALFRLPIIRVdDLEELLEELKEAGYKVVAADL 81
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 489623269 215 AGSVDYRTIDYKsKPVVLLMGNEQAGLPVELAREAGALARIPQAGRADSLNLAIATGIMLFEA 277
Cdd:cd18095 82 DGGSSLYDLDLP-KPVALVLGNEGNGLSDELLELCDKRVTIPMSGGVESLNVAVAAAILLYEL 143
|
|
| SpoU-like_RNA-MTase |
cd18104 |
SAM-dependent RNA methylase related to SpoU-TrmH; RNA 2'-O ribose methyltransferase catalyzes ... |
136-279 |
1.92e-45 |
|
SAM-dependent RNA methylase related to SpoU-TrmH; RNA 2'-O ribose methyltransferase catalyzes the methyltransfer from S-adenosyl-L-methionine (AdoMet) to the 2'-OH group of ribose in tRNA or rRNA. It is part of the SpoU family of MTases, a subfamily of the SPOUT methyltransferase superfamily. The SPOUT methyltransferase superfamily is a large class of S-adenosyl-L-methionine (AdoMet or SAM)-dependent RNA MTases which are structurally characterized by a deep trefoil knot.
Pssm-ID: 349977 Cd Length: 146 Bit Score: 150.42 E-value: 1.92e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489623269 136 YVALDRVRDPGNLGTIIRTADAAGASGIILVGETTDPFSLETVRATMGSVFAIPIARANTEDFIRWQRAAGVQVVATHLA 215
Cdd:cd18104 2 ILVLEGLEKPGNLGAILRSADAAGADAVILCDPKTDLFNPNVIRASLGAVFTLPVAEASSEETLAWLKENKIRILATTPK 81
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 489623269 216 GSVDYRTIDYKsKPVVLLMGNEQAGLPVELAREAGALARIPQAGRADSLNLAIATGIMLFEARR 279
Cdd:cd18104 82 AEKLYYEADLR-GPIAIVVGSESEGLSEFWLKAADERVRIPMAGQADSLNVSVAAAILLYEALR 144
|
|
| SpoU_methylase |
pfam00588 |
SpoU rRNA Methylase family; This family of proteins probably use S-AdoMet. |
136-275 |
1.29e-43 |
|
SpoU rRNA Methylase family; This family of proteins probably use S-AdoMet.
Pssm-ID: 425768 Cd Length: 142 Bit Score: 145.37 E-value: 1.29e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489623269 136 YVALDRVRDPGNLGTIIRTADAAGASGIILVGETT-DPFSLETVRATMGSVFAIPIAR-ANTEDFIRWQRAAGVQVVATH 213
Cdd:pfam00588 3 VVVLDNIQDPGNLGAIIRTAAAFGADGLILVEPRSaDPYNPKAIRASAGALFHLPLVVvDNLEEALKDLKEAGYAVVATS 82
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 489623269 214 LAGsVDYRTIDYKsKPVVLLMGNEQAGLPVELAREAGALARIPQAGRADSLNLAIATGIMLF 275
Cdd:pfam00588 83 LGG-KSLYEIDFP-KKVALVFGNEGTGLSNEVLELCDRLVRIPMSGDVESLNVAVAAAIALY 142
|
|
| SpoU-like_family |
cd18082 |
SAM-dependent rRNA or tRNA methylase related to SpoU; RNA 2'-O ribose methyltransferase ... |
136-277 |
1.30e-39 |
|
SAM-dependent rRNA or tRNA methylase related to SpoU; RNA 2'-O ribose methyltransferase catalyzes the methyltransfer from S-adenosyl-L-methionine (AdoMet) to the 2'-OH group of ribose in tRNA or rRNA. It is part of the SpoU family of MTases, a subfamily of the SPOUT methyltransferase superfamily. The SPOUT methyltransferase superfamily is a large class of S-adenosyl-L-methionine (AdoMet or SAM)-dependent RNA MTases which are structurally characterized by a deep trefoil knot.
Pssm-ID: 349955 Cd Length: 145 Bit Score: 135.43 E-value: 1.30e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489623269 136 YVALDRVRDPGNLGTIIRTADAAGASGIILVGETTDPFSLETVRATMGSVFAIPIAR-ANTEDFIRWQRAAGVQVVATHL 214
Cdd:cd18082 1 HLVLDNIRSPGNIGSIFRTADAFGVEKIYLVGPTADIFDPKAKRTSRGTHFSVPYERvDNFEEYLKSLKEEGYPLIGLEL 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 489623269 215 -AGSVDYRTIDYK-SKPVVLLMGNEQAGLPVELAREAGALARIPQAGRADSLNLAIATGIMLFEA 277
Cdd:cd18082 81 tDGSIPLSEFKFKkPKKIALIFGNERSGLSPELLALCDYTVHIPMSGKNSSLNVSVATGIALYEF 145
|
|
| SpoU-like_AviRb |
cd18107 |
SAM-dependent rRNA methylase related to AviRb; AviRb from Streptomyces viridochromogenes ... |
137-277 |
2.33e-37 |
|
SAM-dependent rRNA methylase related to AviRb; AviRb from Streptomyces viridochromogenes methylates the 2'-O atom of U2479 of the 23S ribosomal RNA. AviRb is a member of the SPOUT (SpoU-TrmD) methyltransferase (MTase) superfamily, a large class of S-adenosyl-L-methionine (AdoMet or SAM)-dependent RNA MTases which are structurally characterized by a deep trefoil knot.
Pssm-ID: 349980 Cd Length: 148 Bit Score: 129.43 E-value: 2.33e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489623269 137 VALDRVRDPGNLGTIIRTADAAGASGIILVGETTDPFSLETVRATMGSVFAIPIAR----ANTEDFIRWQRAAGV--QVV 210
Cdd:cd18107 3 VLFDRPTSPGNLGTIIRSADALGAHGLVVTGHAADVYDPKTIRASTGSLFSLPIVRvpsnRELEDWVEARKARGTplQLV 82
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 489623269 211 ATHLAGSVDYRTIDYKSkPVVLLMGNEQAGLPVELAREAGALARIPQAGRADSLNLAIATGIMLFEA 277
Cdd:cd18107 83 GTDEHGDHQIADHDFTR-PTLLLIGNETAGLSAAWRELCDETVSIPMAGSASSLNAACAASIFLYEA 148
|
|
| SpoU-like_RNA-MTase |
cd18109 |
SAM-dependent RNA methylase related to SpoU-TrmH; RNA 2'-O ribose methyltransferase catalyzes ... |
137-276 |
1.04e-36 |
|
SAM-dependent RNA methylase related to SpoU-TrmH; RNA 2'-O ribose methyltransferase catalyzes the methyltransfer from S-adenosyl-L-methionine (AdoMet) to the 2'-OH group of ribose in tRNA or rRNA. It is part of the SpoU family of MTases, a subfamily of the SPOUT methyltransferase superfamily. The SPOUT methyltransferase superfamily is a large class of S-adenosyl-L-methionine (AdoMet or SAM)-dependent RNA MTases which are structurally characterized by a deep trefoil knot.
Pssm-ID: 349982 Cd Length: 141 Bit Score: 127.66 E-value: 1.04e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489623269 137 VALDRVRDPGNLGTIIRTADAAGASGIILVGETTDPFSLETVRATMGSVFAIPIARANTEDFIRwQRAAGVQVVATHLAG 216
Cdd:cd18109 3 LALDGIQDPGNLGTIIRTADWFGIRQIICSPDTVDPYNPKVVQASMGSIFRVQIHYTDLPALLA-ELKKAFPVYGADLDG 81
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 489623269 217 SvDYRTIDYkSKPVVLLMGNEQAGLPVELAREAGALARIPQAGR-ADSLNLAIATGIMLFE 276
Cdd:cd18109 82 E-NLYEFTL-PEKGILVMGNEGHGISPEVLKLLTHRLTIPRYGKgAESLNVAVATAILLSE 140
|
|
| SpoU-like_RlmB |
cd18103 |
SAM-dependent rRNA methylase related to RlmB; 23S rRNA-M2G2251-MTase RlmB catalyzes the ... |
136-277 |
1.09e-36 |
|
SAM-dependent rRNA methylase related to RlmB; 23S rRNA-M2G2251-MTase RlmB catalyzes the methylation of guanosine 2251, a modification conserved in the peptidyltransferase domain of 23S rRNA. It is part of the SpoU family of MTases, a subfamily of the SPOUT methyltransferase superfamily. The SPOUT methyltransferase superfamily is a large class of S-adenosyl-L-methionine (AdoMet or SAM)-dependent RNA MTases which are structurally characterized by a deep trefoil knot.
Pssm-ID: 349976 Cd Length: 143 Bit Score: 127.50 E-value: 1.09e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489623269 136 YVALDRVRDPGNLGTIIRTADAAGASGIIL-----VGETtdpfslETV-RATMGSVFAIPIARA-NTEDFIRWQRAAGVQ 208
Cdd:cd18103 2 LLILDGITDPHNLGAIIRSAEAFGVDGVIIpkrrsAPLT------PTVaKASAGALEHLPIARVtNLARALEELKEAGFW 75
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 489623269 209 VVATHLAGSVDYRTIDYKsKPVVLLMGNEQAGLPVELAREAGALARIPQAGRADSLNLAIATGIMLFEA 277
Cdd:cd18103 76 IYGADGEAEKSLYDVDLT-GPLALVLGSEGKGLRRLVLKNCDFLVKIPMAGKVDSLNVSVAAGIILYEI 143
|
|
| SpoU-like_RNMTL1 |
cd18106 |
SAM-dependent rRNA methylase related to RNMTL1; RNMTL1 (also known as HC90, MRM3 and RMTL1) ... |
137-277 |
1.33e-29 |
|
SAM-dependent rRNA methylase related to RNMTL1; RNMTL1 (also known as HC90, MRM3 and RMTL1) catalyzes the methylation of 2'-O-ribose residues G1370 to GmG residue of the mitochondrial 16S rRNA. RNMTL1 is a member of the SPOUT (SpoU-TrmD) methyltransferase (MTase) superfamily, a large class of S-adenosyl-L-methionine (AdoMet or SAM)-dependent RNA MTases which are structurally characterized by a deep trefoil knot.
Pssm-ID: 349979 Cd Length: 148 Bit Score: 109.26 E-value: 1.33e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489623269 137 VALDRVRDPGNLGTIIRTADAAGASGIILVGETTDPFSLETVRATMGSVFAIPIARANTEDFIRWQRAAGVQV-VA-THL 214
Cdd:cd18106 3 VICDNIRDPGNLGSILRSAAAAGCSKVLLTKGCVDPWEPKVLRAGAGAHFRLPIYGNLSWDDIPNYLPDDSKVfLAdNNL 82
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 489623269 215 AgSVDYRTIDYKSKPVVLLMGNEQAGLPVE---LAREAGALA-RIPQAGRADSLNLAIATGIMLFEA 277
Cdd:cd18106 83 P-VQPYDSIDYCSGPIVLVIGGETHGVSPEaykLAHSTGGSRvHIPLANGVDSLNSAVAASILLFEM 148
|
|
| rRNA_methyl_3 |
TIGR00186 |
rRNA methylase, putative, group 3; this is part of the trmH (spoU) family of rRNA methylases ... |
51-279 |
9.89e-29 |
|
rRNA methylase, putative, group 3; this is part of the trmH (spoU) family of rRNA methylases [Protein synthesis, tRNA and rRNA base modification]
Pssm-ID: 129290 [Multi-domain] Cd Length: 237 Bit Score: 109.74 E-value: 9.89e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489623269 51 GLKLVIDALDLGWKIKtlVYAKAAKGKPQ-VEQVAAKtvaRGGLVLEVNEKVISTITRRDNPQMVVGIFE-QRYSPLRDI 128
Cdd:TIGR00186 6 GKNAVLEALLNQQRVF--ILKGLESKRLKkLIQLAKK---QGINIQLVDRQKLDQLTKGGNHQGIAAKVKpILYKDLNDL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489623269 129 HP----QEGETYVALDRVRDPGNLGTIIRTADAAGASGIILVGETTDPFSLETVRATMGSVFAIPIAR-ANTEDFIRWQR 203
Cdd:TIGR00186 81 YKtaksKKQPFLLILDEITDPHNLGAILRTAEAFGVDGVILPKRRSAPLNSTVVKTSSGAVEYVPLARvTNLSRTITKLK 160
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 489623269 204 AAGVQVVAT-HLAGSVDYRTIDYKskPVVLLMGNEQAGLPVELAREAGALARIPQAGRADSLNLAIATGIMLFEARR 279
Cdd:TIGR00186 161 ESGFWTVGTdLDAQDTLYQVKLTK--PLALVVGNEGEGVSRLIKENCDFLIKIPMAGKVDSLNVSVAAGILLFEIKR 235
|
|
| SpoU-like_TrmH |
cd18092 |
SAM-dependent tRNA methylase related to TrmH; TrmH catalyzes the transfer of the methyl group ... |
137-279 |
5.54e-26 |
|
SAM-dependent tRNA methylase related to TrmH; TrmH catalyzes the transfer of the methyl group from S-adenosyl-L-methionine (AdoMet) to the 2'-OH group of the ribose of the universally conserved guanosine 18 (G18) position in tRNA. It is part of the SpoU family of MTases, a subfamily of the SPOUT methyltransferase superfamily. The SPOUT methyltransferase superfamily is a large class of S-adenosyl-L-methionine (AdoMet or SAM)-dependent RNA MTases which are structurally characterized by a deep trefoil knot.
Pssm-ID: 349965 Cd Length: 162 Bit Score: 100.23 E-value: 5.54e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489623269 137 VALDRVRDPGNLGTIIRTADAAGASGIILVgETTDPFsLETVRATMGSVFAIPIAR-ANTEDFIRWQRAAGVQVVATHL- 214
Cdd:cd18092 19 VVLENVHDPHNASAVLRTCDAFGVQDVHVI-EPKNKF-KKNRGVAMGADKWLDVHRhDSTEECLAALKEQGYRIVATSLs 96
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 489623269 215 AGSVDYRTIDYkSKPVVLLMGNEQAGLPVELAREAGALARIPQAGRADSLNLAIATGIMLFEARR 279
Cdd:cd18092 97 PDAVPLDELDY-TRPTALVFGNEKDGVSEEALAAADERVYIPMYGFVESLNVSVAAAIILYELQR 160
|
|
| SpoU-like |
cd18097 |
SAM-dependent rRNA or tRNA methylase related to SpoU; RNA 2'-O ribose methyltransferase ... |
136-277 |
8.15e-26 |
|
SAM-dependent rRNA or tRNA methylase related to SpoU; RNA 2'-O ribose methyltransferase catalyzes the methyltransfer from S-adenosyl-L-methionine (AdoMet) to the 2'-OH group of ribose in tRNA or rRNA. It is part of the SpoU family of MTases, a subfamily of the SPOUT methyltransferase superfamily. The SPOUT methyltransferase superfamily is a large class of S-adenosyl-L-methionine (AdoMet or SAM)-dependent RNA MTases which are structurally characterized by a deep trefoil knot.
Pssm-ID: 349970 Cd Length: 144 Bit Score: 99.18 E-value: 8.15e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489623269 136 YVALDRVRDPGNLGTIIRTADAAGASGIILVGETTDPFSLETVRATMGSVFAIPIAR-ANTEDFIRWQRAAGVQVVATHL 214
Cdd:cd18097 2 VVVLDNLRSAHNVGSIFRTADAAGVEKIYLCGYTPTPPHPKVAKTALGAEESVPWEHfEDTLEAVRALKARGYTIIALET 81
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 489623269 215 A-GSVDYRTIDYkSKPVVLLMGNEQAGLPVELAREAGALARIPQAGRADSLNLAIATGIMLFEA 277
Cdd:cd18097 82 TeNSVPLHEARL-PRPLALVLGNEVRGVSPEVLALCDAVVEIPMFGRKNSLNVAVAAAVALYEL 144
|
|
| SpoU-like_MRM1 |
cd18105 |
SAM-dependent rRNA methylase related to MRM1; MRM1 catalyzes the methylation of 2'-O-ribose ... |
136-274 |
1.70e-25 |
|
SAM-dependent rRNA methylase related to MRM1; MRM1 catalyzes the methylation of 2'-O-ribose residues G1145 to GmG residue of the mitochondrial 16S rRNA. MRM1 is a member of the SPOUT (SpoU-TrmD) methyltransferase (MTase) superfamily, a large class of S-adenosyl-L-methionine (AdoMet or SAM)-dependent RNA MTases which are structurally characterized by a deep trefoil knot.
Pssm-ID: 349978 Cd Length: 158 Bit Score: 98.74 E-value: 1.70e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489623269 136 YVALDRVRDPGNLGTIIRTADAAGASGIILVGETTDPFSLETVRATMGSVFAIPIAR-ANTEDFIRWQRAAGVQVVATHL 214
Cdd:cd18105 2 WLLLDEITDPQNLGAILRSAYFLGVDGVVVSSKNSAPLSPVVSKASAGALELMPIYSvDNLASFLKSSKENGWKVVGTSA 81
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 489623269 215 AGSV--DYRTIDYKS-------KPVVLLMGNEQAGLPVELAREAGALARIPQAGRA-----DSLNLAIATGIML 274
Cdd:cd18105 82 PPSAssDKKTIPANElsellleKPTILVLGNEGRGLRTNIKNLCDYLVSIPGGRSAenpgvDSLNVSVAAGILL 155
|
|
| SpoU-like_NHR |
cd18108 |
Nosiheptide-resistance methyltransferase (NHR); Nosiheptide-resistance methyltransferase (NHR) ... |
137-276 |
2.32e-24 |
|
Nosiheptide-resistance methyltransferase (NHR); Nosiheptide-resistance methyltransferase (NHR) confers resistance to the thiazole antibiotic nosiheptide via catalyzing 2'O-methylation of 23S rRNA at the nucleotide A1067. NHR is a member of the SPOUT (SpoU-TrmD) methyltransferase (MTase) superfamily, a large class of S-adenosyl-L-methionine (AdoMet or SAM)-dependent RNA MTases which are structurally characterized by a deep trefoil knot.
Pssm-ID: 349981 Cd Length: 144 Bit Score: 95.62 E-value: 2.32e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489623269 137 VALDRVRDPGNLGTIIRTADAAGASGIILV-GETTDPFSLETVRATMGSVFAIPIARANTEDFIRWQRAAGVQVVATHLA 215
Cdd:cd18108 3 VVLDGVRIVGNIGAIVRTSLALGAAGIVLVdSDLATVADRRLLRASRGYVFSLPVVLADREEAVAFLRDNDIPLMTLDAD 82
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 489623269 216 GSVDYRTIDYKSKPVVLLMGNEQAGLPVELAREAGALARIPQAGRADSLNLAIATGIMLFE 276
Cdd:cd18108 83 GDVPVKELGDRPDRLALVFGSEKGGPSGLFEEAAAGTVSIPMSSSTESLNVSVSAGIALHE 143
|
|
| PRK11081 |
PRK11081 |
tRNA guanosine-2'-O-methyltransferase; Provisional |
137-279 |
3.67e-19 |
|
tRNA guanosine-2'-O-methyltransferase; Provisional
Pssm-ID: 236837 [Multi-domain] Cd Length: 229 Bit Score: 83.89 E-value: 3.67e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489623269 137 VALDRVRDPGNLGTIIRTADAAGASGIILVGETTDpfsLETVRAT-MGSVFAIPIAR-ANTEDFIRWQRAAGVQVVATHL 214
Cdd:PRK11081 22 VCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSR---MRTMGSTaAGSNSWVQVKThRTIGDAVAHLKGQGMQILATHL 98
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489623269 215 -AGSVDYRTIDYkSKPVVLLMGNEQAGlpveLAREAGALAR----IPQAGRADSLNLAIATGIMLFEARR 279
Cdd:PRK11081 99 sDTAVDFREIDY-TRPTCILMGQEKTG----ISQEALALADqdiiIPMIGMVQSLNVSVASALILYEAQR 163
|
|
| SpoU-like_TrmL |
cd18094 |
SAM-dependent tRNA methylase related to TrmL; tRNA (Um34/Cm34) methyltransferase TrmL ... |
145-281 |
2.04e-16 |
|
SAM-dependent tRNA methylase related to TrmL; tRNA (Um34/Cm34) methyltransferase TrmL catalyzes the methyl transfer from S-adenosyl-L-methionine (AdoMet) to the 2'-OH at position 34 in both tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). It is part of the SpoU family of MTases, a subfamily of the SPOUT methyltransferase superfamily. The SPOUT methyltransferase superfamily is a large class of S-adenosyl-L-methionine (AdoMet or SAM)-dependent RNA MTases which are structurally characterized by a deep trefoil knot.
Pssm-ID: 349967 Cd Length: 145 Bit Score: 74.41 E-value: 2.04e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489623269 145 PGNLGTIIRTADAAGASgIILVGETtdPFSLE---TVRATMGSvfaIPIAR----ANTEDFIRWQRAAGVQVVATHlaGS 217
Cdd:cd18094 10 PQNTGNIARTCAATGAR-LHLIEPL--GFSLDdkrLKRAGLDY---WDHVDltvhDSWEAFLEALPPGRLFLFTTK--GT 81
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 489623269 218 VDYRTIDYKSKpVVLLMGNEQAGLPVE-LAREAGALARIPQAGRADSLNLAIATGIMLFEARRHL 281
Cdd:cd18094 82 KPYTDFDFKPG-DYLVFGRESTGLPEEiLDAFPDRRLRIPMRPKVRSLNLSNSVAIVLYEALRQL 145
|
|
| PRK11181 |
PRK11181 |
23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB; |
139-283 |
3.27e-16 |
|
23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;
Pssm-ID: 183021 [Multi-domain] Cd Length: 244 Bit Score: 76.16 E-value: 3.27e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489623269 139 LDRVRDPGNLGTIIRTADAAGASGIILVGETTDPFSLETVRATMGSVFAIPIAR-ANTEDFIRWQRAAGVQVVAThlAGS 217
Cdd:PRK11181 100 LDGVTDPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAETVPLIRvTNLARTMRMLQEKNIWIVGT--AGE 177
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489623269 218 VDYrTIdYKSK---PVVLLMGNEQAGLPvELAREA-GALARIPQAGRADSLNLAIATGIMLFEARRHLLS 283
Cdd:PRK11181 178 ADH-TL-YQSKltgPLALVMGAEGEGMR-RLTREHcDELISIPMAGSVSSLNVSVATGICLFEAVRQRSA 244
|
|
| TrmL |
COG0219 |
tRNA(Leu) C34 or U34 (ribose-2'-O)-methylase TrmL, contains SPOUT domain [Translation, ... |
145-281 |
2.77e-13 |
|
tRNA(Leu) C34 or U34 (ribose-2'-O)-methylase TrmL, contains SPOUT domain [Translation, ribosomal structure and biogenesis]; tRNA(Leu) C34 or U34 (ribose-2'-O)-methylase TrmL, contains SPOUT domain is part of the Pathway/BioSystem: tRNA modification
Pssm-ID: 439989 Cd Length: 153 Bit Score: 65.83 E-value: 2.77e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489623269 145 PGNLGTIIRTADAAGASgIILVGettdP--FSLET---VRATMGSVFAIPIAR-ANTEDFIRWQRAAGVQVVATHlaGSV 218
Cdd:COG0219 12 PQNTGNIIRLCAATGAR-LHLIE----PlgFSLDDkklKRAGLDYWELVDLTVhDSWEAFLEALPGGRLFLFTTK--GTK 84
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 489623269 219 DYRTIDYKsKPVVLLMGNEQAGLPVE-LAREAGALARIPQAGRADSLNLAIATGIMLFEARRHL 281
Cdd:COG0219 85 PYTDVDYQ-PGDVLLFGRETAGLPEEvLAAPADQRLRIPMRPGVRSLNLSNAVAIVLYEALRQL 147
|
|
| SpoU-like_TRM3-like |
cd18091 |
SAM-dependent tRNA methylase related to TRM3; Yeast tRNA (guanosine(18)-2'-O) ... |
142-276 |
5.70e-13 |
|
SAM-dependent tRNA methylase related to TRM3; Yeast tRNA (guanosine(18)-2'-O)-methyltransferase TRM3 catalyzes the formation of 2'-O-methylguanosine at position 18 (Gm18) in various tRNAs. TRM3 is similar to C-terminal domain of TAR (HIV-1) RNA binding protein 1 (TARBP1), a protein binding to TAR, which functions as a RNA regulatory signal by forming a stable stem-loop structure to which transactivator protein Tat binds. The role of TARBP1 is believed to be to disengage RNA polymerase II from TAR during transcriptional elongation. TRM3 and the C-terminal methyltransferase domain of TARBP1 are members of the SPOUT methyltransferase superfamily.
Pssm-ID: 349964 Cd Length: 145 Bit Score: 64.86 E-value: 5.70e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489623269 142 VRDPGNLGTIIRTADAAGASGIILvgetTDPFSLETVRATMGSVFA---IPI---ARANTEDFIRWQRAAGVQVVATHL- 214
Cdd:cd18091 8 IDKPPNLGGLCRTCEIFGVSKLVL----PNLAVVEDKQFKALSVSAekwLPIeevKPEDLLPYLKEKKQEGYTIVGLEQt 83
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 489623269 215 AGSVDYRtiDYK-SKPVVLLMGNEQAGLPVELAREAGALARIPQAGRADSLNLAIATGIMLFE 276
Cdd:cd18091 84 ANSVSLH--DFQfPKKTVLVLGNEKEGIPAELLSLLDVCVEIPQLGVIRSLNVHVSGAIAIYE 144
|
|
| SpoU-like |
cd18096 |
SAM-dependent rRNA or tRNA methylase related to SpoU; RNA 2'-O ribose methyltransferase ... |
135-276 |
2.51e-11 |
|
SAM-dependent rRNA or tRNA methylase related to SpoU; RNA 2'-O ribose methyltransferase catalyzes the methyltransfer from S-adenosyl-L-methionine (AdoMet) to the 2'-OH group of ribose in tRNA or rRNA. It is part of the SpoU family of MTases, a subfamily of the SPOUT methyltransferase superfamily. The SPOUT methyltransferase superfamily is a large class of S-adenosyl-L-methionine (AdoMet or SAM)-dependent RNA MTases which are structurally characterized by a deep trefoil knot.
Pssm-ID: 349969 Cd Length: 140 Bit Score: 60.31 E-value: 2.51e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489623269 135 TYVALDRVRDPGNLGTIIRTADAAGASGIILVGetTDPFSLetvRATMGSVFAIPIAR-ANTEDFIRWQRAAGVQVVATH 213
Cdd:cd18096 1 LYLVLHNVAKRHNIGTIVRSANAFGVKEVHLVG--RRKFNP---FGAMGTDRHVKFRHfDTLAEAKEYLKERGIRLVGVE 75
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 489623269 214 LA-GSVDYRTIDYKSKpVVLLMGNEQAGL---PVELAReagALARIPQAGRA-DSLNLAIATGIMLFE 276
Cdd:cd18096 76 IVpGAEPIETHPFPGD-TAFVLGNEGTGLsdeQLAICD---GFVYIPQYGSGtASLNVSVAASIVLHH 139
|
|
| PRK10864 |
PRK10864 |
putative methyltransferase; Provisional |
137-280 |
7.96e-10 |
|
putative methyltransferase; Provisional
Pssm-ID: 236779 [Multi-domain] Cd Length: 346 Bit Score: 58.64 E-value: 7.96e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489623269 137 VALDRVRDPGNLGTIIRTADAAGASGIILvgetTDPFSLET---VR-ATMGSVFAIPIARANTEDFIRWQRAAGVQVVAT 212
Cdd:PRK10864 201 LALEDVGNPHNLGGIMRSCAHFGVKGVVV----QDAALLESgaaIRtAEGGAEHVQPITGDSFVDVLDDFRQAGYTIVTT 276
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 489623269 213 hlagSVDYRTIDYKSK---PVVLLMGNEQAGLPvELAREAGALA-RIPQAGRADSLNLAIATGIMLFEARRH 280
Cdd:PRK10864 277 ----SSHKGTPLFKASlpaKMVLVLGQEYDGLS-DAARQQGDLSvSIDGTGNVESLNVSVATGVLLAEWWRQ 343
|
|
| SpoU-like |
cd18098 |
SAM-dependent rRNA or tRNA methylase related to SpoU; RNA 2'-O ribose methyltransferase ... |
137-275 |
2.16e-09 |
|
SAM-dependent rRNA or tRNA methylase related to SpoU; RNA 2'-O ribose methyltransferase catalyzes the methyltransfer from S-adenosyl-L-methionine (AdoMet) to the 2'-OH group of ribose in tRNA or rRNA. It is part of the SpoU family of MTases, a subfamily of the SPOUT methyltransferase superfamily. The SPOUT methyltransferase superfamily is a large class of S-adenosyl-L-methionine (AdoMet or SAM)-dependent RNA MTases which are structurally characterized by a deep trefoil knot.
Pssm-ID: 349971 Cd Length: 138 Bit Score: 54.58 E-value: 2.16e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489623269 137 VALDRVRDPGNLGTIIRTADAAGASGIILVGEttdpfSLETVRA---TMGSVFAIPIARANT-EDFIRWQrAAGVQVVAT 212
Cdd:cd18098 3 IGIENPKTPKNVGTLWRAAGCLGASFVFTIGA-----RYKRRKQstdTSKAWRHIPLFHYDDlEDLAEPL-PFGAVLVAV 76
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 489623269 213 HLA-GSVDYRTIDYkSKPVVLLMGNEQAGLPVELAREAGALARIPQAGradSLNLAIATGIMLF 275
Cdd:cd18098 77 ELTeGATPLPDFKH-PDRAVYLLGPEDGGLPQEVLARCHHVVYLPTRG---SLNVAVAGSIVLY 136
|
|
| SpoU_sub_bind |
pfam08032 |
RNA 2'-O ribose methyltransferase substrate binding; This domain is a RNA 2'-O ribose ... |
50-120 |
5.71e-09 |
|
RNA 2'-O ribose methyltransferase substrate binding; This domain is a RNA 2'-O ribose methyltransferase substrate binding domain.
Pssm-ID: 429793 [Multi-domain] Cd Length: 74 Bit Score: 51.86 E-value: 5.71e-09
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 489623269 50 EGLKLVIDALDLGWKIKTLvYAKAAKGKPQVEQVAAKTVARGGLVLEVNEKVISTITRRDNPQMVVGIFEQ 120
Cdd:pfam08032 3 YGRHAVLEALKSGPEIKKL-YLTEGRRDPRLKELLKLAKERGIKVEEVDRKKLDKLSGTANHQGVVAEVKP 72
|
|
| SpoU_sub_bind |
smart00967 |
RNA 2'-O ribose methyltransferase substrate binding; This domain is a RNA 2'-O ribose ... |
49-120 |
1.29e-08 |
|
RNA 2'-O ribose methyltransferase substrate binding; This domain is a RNA 2'-O ribose methyltransferase substrate binding domain.
Pssm-ID: 214943 [Multi-domain] Cd Length: 70 Bit Score: 50.61 E-value: 1.29e-08
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 489623269 49 AEGLKLVIDALDLGWKIKTLVYAKAAKGKPQVEQVAAKtvARGGLVLEVNEKVISTITRRDNPQMVVGIFEQ 120
Cdd:smart00967 1 IEGRHAVEEALKSGRRIKELYLTEGRAERLKELLKLAK--ERGIKVIEVSKKELDKLSGTANHQGVVAVVKP 70
|
|
| |
