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Concise Results
Standard Results
Full Results
MULTISPECIES: amino acid permease [Sinorhizobium]
Protein Classification
APC family permease ( domain architecture ID 1903533 )
APC (amino acid/polyamine/organocation) family permease is involved in the uptake of a specific amino acid and/or polyamine substrate with the concomitant import of a proton
List of domain hits
Name
Accession
Description
Interval
E-value
AA_permease_2 super family
cl45918 Amino acid permease;
16-492
2.99e-51
Amino acid permease;
TIGR00907 :Pssm-ID: 459263 [Multi-domain]
Cd Length: 482
Bit Score: 181.87
E-value: 2.99e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489624747 16 L HSM GY AQ EL E R RM S QF S N F AVS FSI ICILS G GINSLAQAT S GA G GAA I GI GW PLGCFI S FVF A VAM A QI SSAYPT A GG L 95
Cdd:TIGR00907 1 L VAL GY KP EL K R EF S LW S I F GFA FSI SNSWT G ISTTYNYGL S SG G AMS I VW GW IIAGAG S ICI A LSL A EL SSAYPT S GG Q 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489624747 96 Y H W GSI L G ---- NR F TG W L T A WFNL L G L V -- T VLGAIN V GTYYFFMG S FG TP YFGLED T TMTRIVFLAI I TGAQ AL V N HM 169
Cdd:TIGR00907 81 Y F W SAK L A pprq MP F AS W M T G WFNL A G Q V ag T ASTDLS V AQLILGIV S LT TP GREYIP T RWHIFGIMIG I HLIH AL I N SL 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489624747 170 GIGLTAKL T DFSG Y LIFVTAILLALVC LA AADTYEISRL F T F S N YSGE TGG nvwp QTS G TWV FLLGLL L P IYTI TGYD AS 249
Cdd:TIGR00907 161 PTKWLPRI T SSAA Y WSLLGFLTICITL LA CKSPKFNDGK F V F T N FNNS TGG ---- WKP G GFA FLLGLL N P AWSM TGYD GT 236
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489624747 250 AH TS EE TVKAAHSV PR GM I SS V LWAALF G YIMLCSFVLMIP D M D ----- EAAKQGWNV F FW A MDAQVNP I ikd V L YLA I F 324
Cdd:TIGR00907 237 AH MA EE IENPEVVG PR AI I GA V AIGIVT G FCFNIVLFFSMG D I D sliss TTGQPIAQI F YN A LGNKAGA I --- F L LCL I L 313
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489624747 325 V SQWL C GLATV T SV SRMI F AFSRDGGLP A S KAL S K V S P TYRT P VA A I W TGSILAV L F vwgs S L VSI G DTPVYTIVV S CTV 404
Cdd:TIGR00907 314 V TSFF C AITCM T AN SRMI Y AFSRDGGLP F S PLW S R V N P RTQV P LN A V W LSAVWII L I ---- G L LGL G SSTAFQAIF S VCT 389
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489624747 405 IF L FF S FA IPI TLG L f A W G TSKWDK m GP WN LG E - G M F - KLF A ILSI V AMVLI F ---- VL GIQ P P N - DW A LYITV G F L IVT 477
Cdd:TIGR00907 390 VA L DV S YV IPI ICK L - A K G RNTIAP - GP FW LG K y G F F v NAV A VAWT V FSSVL F sfpp VL PVT P E N m NY A VVVFA G V L AIS 467
490
....*....|....*
gi 489624747 478 GII W FAFENRR F R GP 492
Cdd:TIGR00907 468 LVY W KYKGRKE F T GP 482
Name
Accession
Description
Interval
E-value
2A0304
TIGR00907 amino acid permease (GABA permease); [Transport and binding proteins, Amino acids, peptides ...
16-492
2.99e-51
amino acid permease (GABA permease); [Transport and binding proteins, Amino acids, peptides and amines]
Pssm-ID: 273331 [Multi-domain]
Cd Length: 482
Bit Score: 181.87
E-value: 2.99e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489624747 16 L HSM GY AQ EL E R RM S QF S N F AVS FSI ICILS G GINSLAQAT S GA G GAA I GI GW PLGCFI S FVF A VAM A QI SSAYPT A GG L 95
Cdd:TIGR00907 1 L VAL GY KP EL K R EF S LW S I F GFA FSI SNSWT G ISTTYNYGL S SG G AMS I VW GW IIAGAG S ICI A LSL A EL SSAYPT S GG Q 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489624747 96 Y H W GSI L G ---- NR F TG W L T A WFNL L G L V -- T VLGAIN V GTYYFFMG S FG TP YFGLED T TMTRIVFLAI I TGAQ AL V N HM 169
Cdd:TIGR00907 81 Y F W SAK L A pprq MP F AS W M T G WFNL A G Q V ag T ASTDLS V AQLILGIV S LT TP GREYIP T RWHIFGIMIG I HLIH AL I N SL 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489624747 170 GIGLTAKL T DFSG Y LIFVTAILLALVC LA AADTYEISRL F T F S N YSGE TGG nvwp QTS G TWV FLLGLL L P IYTI TGYD AS 249
Cdd:TIGR00907 161 PTKWLPRI T SSAA Y WSLLGFLTICITL LA CKSPKFNDGK F V F T N FNNS TGG ---- WKP G GFA FLLGLL N P AWSM TGYD GT 236
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489624747 250 AH TS EE TVKAAHSV PR GM I SS V LWAALF G YIMLCSFVLMIP D M D ----- EAAKQGWNV F FW A MDAQVNP I ikd V L YLA I F 324
Cdd:TIGR00907 237 AH MA EE IENPEVVG PR AI I GA V AIGIVT G FCFNIVLFFSMG D I D sliss TTGQPIAQI F YN A LGNKAGA I --- F L LCL I L 313
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489624747 325 V SQWL C GLATV T SV SRMI F AFSRDGGLP A S KAL S K V S P TYRT P VA A I W TGSILAV L F vwgs S L VSI G DTPVYTIVV S CTV 404
Cdd:TIGR00907 314 V TSFF C AITCM T AN SRMI Y AFSRDGGLP F S PLW S R V N P RTQV P LN A V W LSAVWII L I ---- G L LGL G SSTAFQAIF S VCT 389
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489624747 405 IF L FF S FA IPI TLG L f A W G TSKWDK m GP WN LG E - G M F - KLF A ILSI V AMVLI F ---- VL GIQ P P N - DW A LYITV G F L IVT 477
Cdd:TIGR00907 390 VA L DV S YV IPI ICK L - A K G RNTIAP - GP FW LG K y G F F v NAV A VAWT V FSSVL F sfpp VL PVT P E N m NY A VVVFA G V L AIS 467
490
....*....|....*
gi 489624747 478 GII W FAFENRR F R GP 492
Cdd:TIGR00907 468 LVY W KYKGRKE F T GP 482
PotE
COG0531 Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
18-488
9.79e-45
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
Pssm-ID: 440297 [Multi-domain]
Cd Length: 438
Bit Score: 163.14
E-value: 9.79e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489624747 18 S M G YAQ EL E R RMSQ F SNF A VSFSI I ci LSG GI NS L AQATS G AG G A A IGIG W PLGCFISFVF A VAM A QIS SA Y P T AGG L Y H 97
Cdd:COG0531 2 S R G ESS EL K R KLGL F DLV A LGVGA I -- IGA GI FV L PGLAA G LA G P A AILA W LIAGLLALLV A LSY A ELA SA F P R AGG A Y T 79
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489624747 98 WGSILGNRFT G W L TA W FN LL GL V TVLG A invgt YYFFM G SFGTPY F GLEDTTMTRI V FLAII T gaqa L V N HM G IGLT AK L 177
Cdd:COG0531 80 YARRALGPLL G F L AG W AL LL SY V LAVA A ----- VAVAF G GYLSSL F PAGGSVLIAL V LILLL T ---- L L N LR G VKES AK V 150
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489624747 178 TDFSGY L IFVTAI L LA lvclaaadtyeisr LFTFSNYSGETGGNVW P QTS G TWVF L LG L L L PIYTI TG YD A S A HTS EE TV 257
Cdd:COG0531 151 NNILTV L KLLVLL L FI -------------- VVGLFAFDPANFTPFL P AGG G LSGV L AA L A L AFFAF TG FE A I A NLA EE AK 216
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489624747 258 KAAHSV PR GM I S S V L WAALFGYIMLCSFVLMI P DMDE AA KQ gw NVFFW A MD A QVN P IIKDVLY L AIFV S QWLCGL A TVTS 337
Cdd:COG0531 217 NPKRNI PR AI I L S L L IVGVLYILVSLALTGVV P YDEL AA SG -- APLAD A AE A VFG P WGAILIA L GALL S LLGALN A SILG 294
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489624747 338 V SR MIF A FS RDG G LP as K ALS KV S P TYR TPV A AI WTGSIL A V L FVWGSS lvsigdt PVY T IVV S CTVIFLFFSFAI p IT L 417
Cdd:COG0531 295 A SR LLY A MA RDG L LP -- K VFA KV H P RFG TPV N AI LLTGVI A L L LLLLGA ------- ASF T ALA S LASVGVLLAYLL - VA L 364
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 489624747 418 GLFAWGTSKW D KMG P WNL geg MFK L FA IL S I VAMVLIFV L GIQ ppnd W AL Y I TVGF L IV t G IIWFAFEN RR 488
Cdd:COG0531 365 AVIVLRRRRP D LPR P FRV --- PLP L IP IL G I LLCLFLLY L LGP ---- G AL L I GLVL L AI - G LLLYLLYR RR 427
AA_permease_2
pfam13520 Amino acid permease;
30-481
9.54e-31
Amino acid permease;
Pssm-ID: 404414 [Multi-domain]
Cd Length: 427
Bit Score: 123.96
E-value: 9.54e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489624747 30 SQF S N FA VSFSII cils G G INSLAQATSGA GG A A IGIGWPLGCF I - S FVFAVAM A QI SSA Y P TA GG L Y HWGSILGNR F TG 108
Cdd:pfam13520 2 GLL S A FA LVIGSV ---- I G SGIFVAPLVAS GG P A LIVWGWIAAI I f S LAVGLVY A EL SSA L P RS GG I Y VYLENAFGK F VA 77
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489624747 109 W L TA W F N LLGL V TV L GAINVGTYYFFMGSF G TPYFG le D T TM T RIVFL AI ITG a Q A LV N HM G IGLT AK LTDFS G Y L IFVT 188
Cdd:pfam13520 78 F L AG W S N WFAY V LG L ASSASVAASYLLSAL G PDLVP -- T T WL T YGIAI AI LII - F A II N IR G VRES AK IQNIL G I L KLLL 154
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489624747 189 AIL L ALVCLA aadtye ISRLFTFS N YSGETGGNVW P qt S G TWVFLL G L L LPIYTI TG YDAS A HT SEE TV K AA hs VP RGMI 268
Cdd:pfam13520 155 PLI L IIILGL ------ VTADGGGF N LLSGEWHTFF P -- D G WPGVFA G F L GVLWSF TG FESA A NV SEE VK K RN -- VP KAIF 224
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489624747 269 SS V LWAALF g YI MLCSFVLMIPDM DE A A KQGWNVFFW A -- MD A QVNPIIKDVLYLAIFV S QWLCGLATVTSV SR MIF A FS 346
Cdd:pfam13520 225 IG V IIVGVL - YI LVNIAFFGVVPD DE I A LSSGLGQVA A ll FQ A VGGKWGAIIVVILLAL S LLGAVNTAIVGA SR LLY A LA 303
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489624747 347 RDG G LP A S KALS KV SP t YRT P VA AI WTGS IL AVLF vwgs S L VSIGDTPV Y TIVV S CTVIFLFF S FAI PI TLG L FAWGTSK 426
Cdd:pfam13520 304 RDG V LP F S RFFA KV NK - FGS P IR AI ILTA IL SLIL ---- L L LFLLSPAA Y NALL S LSAYGYLL S YLL PI IGL L ILRKKRP 378
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*
gi 489624747 427 WDKMG P W nlgegm FKLF AI LS I VAMVLIF V LGIQ PP NDW A LYITVGFL I VTGIIW 481
Cdd:pfam13520 379 DLGRI P G ------ RWPV AI FG I LFSLFLI V ALFF PP VGP A TGSSLNYA I ILIVAF 427
Name
Accession
Description
Interval
E-value
2A0304
TIGR00907 amino acid permease (GABA permease); [Transport and binding proteins, Amino acids, peptides ...
16-492
2.99e-51
amino acid permease (GABA permease); [Transport and binding proteins, Amino acids, peptides and amines]
Pssm-ID: 273331 [Multi-domain]
Cd Length: 482
Bit Score: 181.87
E-value: 2.99e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489624747 16 L HSM GY AQ EL E R RM S QF S N F AVS FSI ICILS G GINSLAQAT S GA G GAA I GI GW PLGCFI S FVF A VAM A QI SSAYPT A GG L 95
Cdd:TIGR00907 1 L VAL GY KP EL K R EF S LW S I F GFA FSI SNSWT G ISTTYNYGL S SG G AMS I VW GW IIAGAG S ICI A LSL A EL SSAYPT S GG Q 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489624747 96 Y H W GSI L G ---- NR F TG W L T A WFNL L G L V -- T VLGAIN V GTYYFFMG S FG TP YFGLED T TMTRIVFLAI I TGAQ AL V N HM 169
Cdd:TIGR00907 81 Y F W SAK L A pprq MP F AS W M T G WFNL A G Q V ag T ASTDLS V AQLILGIV S LT TP GREYIP T RWHIFGIMIG I HLIH AL I N SL 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489624747 170 GIGLTAKL T DFSG Y LIFVTAILLALVC LA AADTYEISRL F T F S N YSGE TGG nvwp QTS G TWV FLLGLL L P IYTI TGYD AS 249
Cdd:TIGR00907 161 PTKWLPRI T SSAA Y WSLLGFLTICITL LA CKSPKFNDGK F V F T N FNNS TGG ---- WKP G GFA FLLGLL N P AWSM TGYD GT 236
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489624747 250 AH TS EE TVKAAHSV PR GM I SS V LWAALF G YIMLCSFVLMIP D M D ----- EAAKQGWNV F FW A MDAQVNP I ikd V L YLA I F 324
Cdd:TIGR00907 237 AH MA EE IENPEVVG PR AI I GA V AIGIVT G FCFNIVLFFSMG D I D sliss TTGQPIAQI F YN A LGNKAGA I --- F L LCL I L 313
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489624747 325 V SQWL C GLATV T SV SRMI F AFSRDGGLP A S KAL S K V S P TYRT P VA A I W TGSILAV L F vwgs S L VSI G DTPVYTIVV S CTV 404
Cdd:TIGR00907 314 V TSFF C AITCM T AN SRMI Y AFSRDGGLP F S PLW S R V N P RTQV P LN A V W LSAVWII L I ---- G L LGL G SSTAFQAIF S VCT 389
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489624747 405 IF L FF S FA IPI TLG L f A W G TSKWDK m GP WN LG E - G M F - KLF A ILSI V AMVLI F ---- VL GIQ P P N - DW A LYITV G F L IVT 477
Cdd:TIGR00907 390 VA L DV S YV IPI ICK L - A K G RNTIAP - GP FW LG K y G F F v NAV A VAWT V FSSVL F sfpp VL PVT P E N m NY A VVVFA G V L AIS 467
490
....*....|....*
gi 489624747 478 GII W FAFENRR F R GP 492
Cdd:TIGR00907 468 LVY W KYKGRKE F T GP 482
PotE
COG0531 Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
18-488
9.79e-45
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
Pssm-ID: 440297 [Multi-domain]
Cd Length: 438
Bit Score: 163.14
E-value: 9.79e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489624747 18 S M G YAQ EL E R RMSQ F SNF A VSFSI I ci LSG GI NS L AQATS G AG G A A IGIG W PLGCFISFVF A VAM A QIS SA Y P T AGG L Y H 97
Cdd:COG0531 2 S R G ESS EL K R KLGL F DLV A LGVGA I -- IGA GI FV L PGLAA G LA G P A AILA W LIAGLLALLV A LSY A ELA SA F P R AGG A Y T 79
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489624747 98 WGSILGNRFT G W L TA W FN LL GL V TVLG A invgt YYFFM G SFGTPY F GLEDTTMTRI V FLAII T gaqa L V N HM G IGLT AK L 177
Cdd:COG0531 80 YARRALGPLL G F L AG W AL LL SY V LAVA A ----- VAVAF G GYLSSL F PAGGSVLIAL V LILLL T ---- L L N LR G VKES AK V 150
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489624747 178 TDFSGY L IFVTAI L LA lvclaaadtyeisr LFTFSNYSGETGGNVW P QTS G TWVF L LG L L L PIYTI TG YD A S A HTS EE TV 257
Cdd:COG0531 151 NNILTV L KLLVLL L FI -------------- VVGLFAFDPANFTPFL P AGG G LSGV L AA L A L AFFAF TG FE A I A NLA EE AK 216
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489624747 258 KAAHSV PR GM I S S V L WAALFGYIMLCSFVLMI P DMDE AA KQ gw NVFFW A MD A QVN P IIKDVLY L AIFV S QWLCGL A TVTS 337
Cdd:COG0531 217 NPKRNI PR AI I L S L L IVGVLYILVSLALTGVV P YDEL AA SG -- APLAD A AE A VFG P WGAILIA L GALL S LLGALN A SILG 294
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489624747 338 V SR MIF A FS RDG G LP as K ALS KV S P TYR TPV A AI WTGSIL A V L FVWGSS lvsigdt PVY T IVV S CTVIFLFFSFAI p IT L 417
Cdd:COG0531 295 A SR LLY A MA RDG L LP -- K VFA KV H P RFG TPV N AI LLTGVI A L L LLLLGA ------- ASF T ALA S LASVGVLLAYLL - VA L 364
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 489624747 418 GLFAWGTSKW D KMG P WNL geg MFK L FA IL S I VAMVLIFV L GIQ ppnd W AL Y I TVGF L IV t G IIWFAFEN RR 488
Cdd:COG0531 365 AVIVLRRRRP D LPR P FRV --- PLP L IP IL G I LLCLFLLY L LGP ---- G AL L I GLVL L AI - G LLLYLLYR RR 427
AA_permease_2
pfam13520 Amino acid permease;
30-481
9.54e-31
Amino acid permease;
Pssm-ID: 404414 [Multi-domain]
Cd Length: 427
Bit Score: 123.96
E-value: 9.54e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489624747 30 SQF S N FA VSFSII cils G G INSLAQATSGA GG A A IGIGWPLGCF I - S FVFAVAM A QI SSA Y P TA GG L Y HWGSILGNR F TG 108
Cdd:pfam13520 2 GLL S A FA LVIGSV ---- I G SGIFVAPLVAS GG P A LIVWGWIAAI I f S LAVGLVY A EL SSA L P RS GG I Y VYLENAFGK F VA 77
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489624747 109 W L TA W F N LLGL V TV L GAINVGTYYFFMGSF G TPYFG le D T TM T RIVFL AI ITG a Q A LV N HM G IGLT AK LTDFS G Y L IFVT 188
Cdd:pfam13520 78 F L AG W S N WFAY V LG L ASSASVAASYLLSAL G PDLVP -- T T WL T YGIAI AI LII - F A II N IR G VRES AK IQNIL G I L KLLL 154
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489624747 189 AIL L ALVCLA aadtye ISRLFTFS N YSGETGGNVW P qt S G TWVFLL G L L LPIYTI TG YDAS A HT SEE TV K AA hs VP RGMI 268
Cdd:pfam13520 155 PLI L IIILGL ------ VTADGGGF N LLSGEWHTFF P -- D G WPGVFA G F L GVLWSF TG FESA A NV SEE VK K RN -- VP KAIF 224
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489624747 269 SS V LWAALF g YI MLCSFVLMIPDM DE A A KQGWNVFFW A -- MD A QVNPIIKDVLYLAIFV S QWLCGLATVTSV SR MIF A FS 346
Cdd:pfam13520 225 IG V IIVGVL - YI LVNIAFFGVVPD DE I A LSSGLGQVA A ll FQ A VGGKWGAIIVVILLAL S LLGAVNTAIVGA SR LLY A LA 303
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489624747 347 RDG G LP A S KALS KV SP t YRT P VA AI WTGS IL AVLF vwgs S L VSIGDTPV Y TIVV S CTVIFLFF S FAI PI TLG L FAWGTSK 426
Cdd:pfam13520 304 RDG V LP F S RFFA KV NK - FGS P IR AI ILTA IL SLIL ---- L L LFLLSPAA Y NALL S LSAYGYLL S YLL PI IGL L ILRKKRP 378
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*
gi 489624747 427 WDKMG P W nlgegm FKLF AI LS I VAMVLIF V LGIQ PP NDW A LYITVGFL I VTGIIW 481
Cdd:pfam13520 379 DLGRI P G ------ RWPV AI FG I LFSLFLI V ALFF PP VGP A TGSSLNYA I ILIVAF 427
AA_permease
pfam00324 Amino acid permease;
68-490
6.17e-12
Amino acid permease;
Pssm-ID: 366028 [Multi-domain]
Cd Length: 467
Bit Score: 67.73
E-value: 6.17e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489624747 68 WPLGCFIS F VFAVAMAQ IS SAY P TA GG L Y HWG S ILGNRFT G WL T A W FNL L GLV TVL GA - INVGTYYFFMGSFGTPYFG L E 146
Cdd:pfam00324 35 YLISGVVI F LVMLSLGE IS TNG P VS GG F Y TYA S RFLGPSL G FA T G W NYW L SWI TVL AL e LTAASILIQFWELVPDIPY L W 114
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489624747 147 dtt MTRI VFL AII T G aqal V N HM G IGLTAKLTDFSGYLIFVTA I LLAL V CLAAADTYEISRLFT F SNYSGET G G N VW P QT 226
Cdd:pfam00324 115 --- VWGA VFL VLL T I ---- I N LV G VKWYGEAEFWFALIKIIAI I GFII V GIILLSGGNPNDGAI F RYLGDNG G K N NF P PG 187
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489624747 227 S G T w V F LLGLLLPIYTI TG YDASAHTSE E TVKAAH S V P RGMISSVLWAAL F GYIM L CSFV L MI P DM D ---- EAAKQGWNV 302
Cdd:pfam00324 188 F G K - G F ISVFVIAFFAF TG IELVGIAAG E VKNPEK S I P KAILQVIWRITI F YILS L LAIG L LV P WN D pgll NDSASAASP 266
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489624747 303 F FWAMDAQVNPIIKDVLYLA I FVSQWLCGLATVT S V SRM IFAFS RDG GL P as K A L S KV S p TYRT P VA AI WTGSILAV L FV 382
Cdd:pfam00324 267 F VIFFKFLGISGLAPLINAV I LTAALSAANSSLY S G SRM LYSLA RDG LA P -- K F L K KV D - KRGV P LR AI LVSMVISL L AL 343
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489624747 383 WGS SL VSIG dtp V YTIVVSCTVIFLFFSFAIPITLG L F --- A WGTSKWD -------- KM GP WNLGE G MFKLFA IL S I VAM 451
Cdd:pfam00324 344 LLA SL NPAI --- V FNFLLAISGLSGLIVWGLISLSH L R frk A FKYQGRS idelpfka PL GP LGVIL G LAAIII IL I I QFL 420
410 420 430 440
....*....|....*....|....*....|....*....|....*
gi 489624747 452 VLIFV l GIQP P ND W ------ A L Y IT V GFLIVTG I IWFAFENRRFR 490
Cdd:pfam00324 421 YAFLP - VPGG P KN W gagsfa A A Y LI V LLFLIIL I GVKLHVKNWKP 464
2A0303
TIGR00906 cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides ...
241-487
9.34e-05
cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides and amines]
Pssm-ID: 273330 [Multi-domain]
Cd Length: 557
Bit Score: 45.19
E-value: 9.34e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489624747 241 YTIT G Y DA S A H T S EE TVKAAHSV P R G MIS S V L WAALFGYI M LCSFV LM I P DMDEAAKQGWN V F F WAMDAQVNPI I KD V ly 320
Cdd:TIGR00906 242 FAFI G F DA I A T T G EE VKNPQRAI P I G IVT S L L VCFVAYFL M SAALT LM M P YYLLDPDAPFP V A F EYVGWDPAKY I VA V -- 319
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489624747 321 laifvs QW LCG LA T VTSVS ----- R M I F A FS RDG G L P as K A L SKVSPTYR TP VA A IWTGSIL A V L FVWGSS L ------ V S 389
Cdd:TIGR00906 320 ------ GA LCG MS T SLLGG mfplp R V I Y A MA RDG L L F -- K W L AQINSKTK TP IN A TVVSGAI A A L MAFLFD L kalvdl L S 391
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489624747 390 IG DTPV Y TI V VS C TV I FLFFSFAIPI --------- TL GLFAWG TSK WDKMGP wnl G EGMFK LF A -- IL SIVAMVLIFVLG 458
Cdd:TIGR00906 392 IG TLLA Y SL V AA C VL I LRYQPGLVYD qakdtdekd TL DSWVPF TSK SESQSE --- G FSLRT LF S gl IL GLSILTTYGRAA 468
250 260 270
....*....|....*....|....*....|...
gi 489624747 459 I Q p PND W ALYITVG FL I ---- V TGI IW FAFE N R 487
Cdd:TIGR00906 469 I A - EEA W SIALLTL FL V lfll V VLT IW RQPQ N K 500
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.21
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
