NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|489631917|ref|WP_003536357|]
View 

MULTISPECIES: DUF2325 domain-containing protein [Sinorhizobium]

Protein Classification

DUF2325 domain-containing protein( domain architecture ID 10562266)

DUF2325 domain-containing protein similar to Desulfitobacterium hafniense UPF0751 protein DSY3086

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
DUF2325 pfam10087
Uncharacterized protein conserved in bacteria (DUF2325); Members of this family of ...
 37-130 7.50e-29

Uncharacterized protein conserved in bacteria (DUF2325); Members of this family of hypothetical bacterial proteins have no known function.


:

Pssm-ID: 431042  Cd Length: 94  Bit Score: 100.69  E-value: 7.50e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489631917   37 SFLYVGGRDCQVAHLRQIASSYGAELIHHDGGLREAVSRIDRVLPSVDCVFCPIDCISHDACLRVKTGCKKWGKAFVPLR 116
Cdd:pfam10087   1 SVLIVGGHDRMVRQYRDLCEKYGGKFKVFDGMKGGGVKRLEKKIGSADLVVLFTDTVSHKMVKTAKKEAKKKGKPVVRLH 80

                          90
                  ....*....|....
gi 489631917  117 NGSKSSLERALQDL 130
Cdd:pfam10087  81 SSSVSALRRALEQL 94
 
Name Accession Description Interval E-value
DUF2325 pfam10087
Uncharacterized protein conserved in bacteria (DUF2325); Members of this family of ...
 37-130 7.50e-29

Uncharacterized protein conserved in bacteria (DUF2325); Members of this family of hypothetical bacterial proteins have no known function.


Pssm-ID: 431042  Cd Length: 94  Bit Score: 100.69  E-value: 7.50e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489631917   37 SFLYVGGRDCQVAHLRQIASSYGAELIHHDGGLREAVSRIDRVLPSVDCVFCPIDCISHDACLRVKTGCKKWGKAFVPLR 116
Cdd:pfam10087   1 SVLIVGGHDRMVRQYRDLCEKYGGKFKVFDGMKGGGVKRLEKKIGSADLVVLFTDTVSHKMVKTAKKEAKKKGKPVVRLH 80

                          90
                  ....*....|....
gi 489631917  117 NGSKSSLERALQDL 130
Cdd:pfam10087  81 SSSVSALRRALEQL 94
 
Name Accession Description Interval E-value
DUF2325 pfam10087
Uncharacterized protein conserved in bacteria (DUF2325); Members of this family of ...
 37-130 7.50e-29

Uncharacterized protein conserved in bacteria (DUF2325); Members of this family of hypothetical bacterial proteins have no known function.


Pssm-ID: 431042  Cd Length: 94  Bit Score: 100.69  E-value: 7.50e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489631917   37 SFLYVGGRDCQVAHLRQIASSYGAELIHHDGGLREAVSRIDRVLPSVDCVFCPIDCISHDACLRVKTGCKKWGKAFVPLR 116
Cdd:pfam10087   1 SVLIVGGHDRMVRQYRDLCEKYGGKFKVFDGMKGGGVKRLEKKIGSADLVVLFTDTVSHKMVKTAKKEAKKKGKPVVRLH 80

                          90
                  ....*....|....
gi 489631917  117 NGSKSSLERALQDL 130
Cdd:pfam10087  81 SSSVSALRRALEQL 94
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH