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Conserved domains on  [gi|489821789|ref|WP_003725588|]
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YuzD family protein [Listeria monocytogenes]

Protein Classification

YuzD family protein( domain architecture ID 10538154)

YuzD family protein is a DUF1462 domain-containing protein similar to Bacillus subtilis putative disulfide oxidoreductase YuzD

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF1462 pfam07315
Protein of unknown function (DUF1462); This family consists of several hypothetical bacterial ...
 8-99 9.15e-55

Protein of unknown function (DUF1462); This family consists of several hypothetical bacterial proteins of around 100 residues in length. The function of this family is unknown.


:

Pssm-ID: 429405  Cd Length: 93  Bit Score: 165.10  E-value: 9.15e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489821789    8 YVYGSTTICASCVGAPSSKETEEWLRAAIGRKFSGQPFVVEYVDIFNPPNEKALADMANKIVEEDYMYPVIVVDGEIIAE 87
Cdd:pfam07315   1 TVYGAEVICASCVNLPSSKETYEWLEAALKRKYPNQPFSFTYIDIFEPPNDDEDQEFAERILEDELFYPLVVINDEVVAE 80

                          90
                  ....*....|..
gi 489821789   88 GNPRLKDIYQVM 99
Cdd:pfam07315  81 GNPRLKDIYEEI 92
 
Name Accession Description Interval E-value
DUF1462 pfam07315
Protein of unknown function (DUF1462); This family consists of several hypothetical bacterial ...
 8-99 9.15e-55

Protein of unknown function (DUF1462); This family consists of several hypothetical bacterial proteins of around 100 residues in length. The function of this family is unknown.


Pssm-ID: 429405  Cd Length: 93  Bit Score: 165.10  E-value: 9.15e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489821789    8 YVYGSTTICASCVGAPSSKETEEWLRAAIGRKFSGQPFVVEYVDIFNPPNEKALADMANKIVEEDYMYPVIVVDGEIIAE 87
Cdd:pfam07315   1 TVYGAEVICASCVNLPSSKETYEWLEAALKRKYPNQPFSFTYIDIFEPPNDDEDQEFAERILEDELFYPLVVINDEVVAE 80

                          90
                  ....*....|..
gi 489821789   88 GNPRLKDIYQVM 99
Cdd:pfam07315  81 GNPRLKDIYEEI 92
YuzD COG4837
Disulfide oxidoreductase YuzD [Posttranslational modification, protein turnover, chaperones];
7-104 9.47e-54

Disulfide oxidoreductase YuzD [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 443865  Cd Length: 99  Bit Score: 162.74  E-value: 9.47e-54
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489821789   7 LYVYGSTTICASCVGAPSSKETEEWLRAAIGRKFSGQPFVVEYVDIFNPPNEKALADMANKIVEEDYMYPVIVVDGEIIA 86
Cdd:COG4837    1 ITVYGAEVICASCVNAPSSKDTYEWLQAALGRKYPDQPFNYTYIDIEEPPENEEDQQFAERILEDELFYPLVVINDEIVG 80

                         90
                 ....*....|....*...
gi 489821789  87 EGNPRLKDIYQVMTDRGY 104
Cdd:COG4837   81 EGYPQLKPIYRFLEKHGY 98
 
Name Accession Description Interval E-value
DUF1462 pfam07315
Protein of unknown function (DUF1462); This family consists of several hypothetical bacterial ...
 8-99 9.15e-55

Protein of unknown function (DUF1462); This family consists of several hypothetical bacterial proteins of around 100 residues in length. The function of this family is unknown.


Pssm-ID: 429405  Cd Length: 93  Bit Score: 165.10  E-value: 9.15e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489821789    8 YVYGSTTICASCVGAPSSKETEEWLRAAIGRKFSGQPFVVEYVDIFNPPNEKALADMANKIVEEDYMYPVIVVDGEIIAE 87
Cdd:pfam07315   1 TVYGAEVICASCVNLPSSKETYEWLEAALKRKYPNQPFSFTYIDIFEPPNDDEDQEFAERILEDELFYPLVVINDEVVAE 80

                          90
                  ....*....|..
gi 489821789   88 GNPRLKDIYQVM 99
Cdd:pfam07315  81 GNPRLKDIYEEI 92
YuzD COG4837
Disulfide oxidoreductase YuzD [Posttranslational modification, protein turnover, chaperones];
7-104 9.47e-54

Disulfide oxidoreductase YuzD [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 443865  Cd Length: 99  Bit Score: 162.74  E-value: 9.47e-54
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489821789   7 LYVYGSTTICASCVGAPSSKETEEWLRAAIGRKFSGQPFVVEYVDIFNPPNEKALADMANKIVEEDYMYPVIVVDGEIIA 86
Cdd:COG4837    1 ITVYGAEVICASCVNAPSSKDTYEWLQAALGRKYPDQPFNYTYIDIEEPPENEEDQQFAERILEDELFYPLVVINDEIVG 80

                         90
                 ....*....|....*...
gi 489821789  87 EGNPRLKDIYQVMTDRGY 104
Cdd:COG4837   81 EGYPQLKPIYRFLEKHGY 98
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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