|
Name |
Accession |
Description |
Interval |
E-value |
| Fiu |
COG4774 |
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism]; |
70-734 |
0e+00 |
|
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism];
Pssm-ID: 443806 [Multi-domain] Cd Length: 639 Bit Score: 573.36 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 70 LGTRDNLETPFSITAYTNELIQDRQAKGVGDVLQNDPGVRVARGFGNFQESYFIRGFiLSSDDIAYNGLYgLLPRQYIST 149
Cdd:COG4774 1 KTDTPLLDTPQSVTVVTRELIEDQGATSLADALRNVPGVTFGAGEGGNGDSFSIRGF-SASGDIYVDGLR-DPGQYRRDT 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 150 QLFERVEVLRGASAFLTGAppsgGGIGGVINLVPKRAPNEPLTRFSAGYGSDSMLEASADIGRRFGpdDSVGIRINAAQR 229
Cdd:COG4774 79 FNLERVEVLKGPASVLYGR----GSPGGVINLVTKRPTDEPFTEVTLTYGSDGQRRATLDVNGPLG--DDLAYRLNGMYR 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 230 GGETAIDGERTRTTVFALGLDWR-GERARLSADIGYQDNRLkraRPNVTLAGDAAKVPGAPDAGSNYAQPWSYSNERDVF 308
Cdd:COG4774 153 DSDSYRDGVDNDRWGIAPSLTWRlGDRTRLTLDYEYQDDDR---TPDYGVPAVANGRPVDVDRSTFYGQPDDYSDSETDS 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 309 GTLRGEYDFNDRITGWAAYGMRQSKEENSLANLNGVNGAGQGKFYRFDNAREDTVNTGEIGLRAKARTGPVGHELVASAS 388
Cdd:COG4774 230 ATLRLEHDFNDNWTLRNALRYSDYDRDYRNTYPTGGNATGTVTRSAYRRDQDNDTLSNQTDLTGKFDTGGVKHTLLAGVE 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 389 YFDLEKKNAYVMDFFNQFDTSIYDPVSYAkpaisstAFRGNDMDDPAKQGVIRLASYALGDTMSfFDDKVLLTAGIRHQR 468
Cdd:COG4774 310 YSREDSDNARYSGGGTAPTVNLYNPVYGA-------PVTGPTLGGADNDSRTDTTGLYLQDTIS-LTDRWSLLAGLRYDR 381
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 469 LYQRDYSYDTGIGGTPYEQSHNSPAAGLVVRVTPQVSLYANYIEALSAGDTAPQTANGlpvvnhGESLAPYVSKQKEVGV 548
Cdd:COG4774 382 FDTDYTDRTTGATTSSYDDSAFSPRAGLVYKPTPNLSLYASYSTSFNPGGGAPSLSNA------GQALDPEKSRQYEVGV 455
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 549 KFE--HDGLGGGLALFSTDKPRGFVGD---DQVFRASGKDRHRGVELTTYGELTRSVRVLGGLTWLDAKQLSTGNAATDG 623
Cdd:COG4774 456 KWDllDGRLSLTAALFRIEKTNVRTTDpanPGVYVQTGEQRSRGVELEATGELTPGWSVLAGYTYLDAEITKSANAANVG 535
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 624 KRVIGVPRFQANLGVEWDIPgVQGLTVDGRVVYTGSSYADAANTLEVPGWTRLDAGLRYmtDIGGHlVTWRARVENIANR 703
Cdd:COG4774 536 NRLPNVPRHSASLWTTYDLP-LPGLTLGGGVRYVGSRYADAANTVKLPSYTRFDAGASY--RLNKN-LTLRLNVNNLTDK 611
|
650 660 670
....*....|....*....|....*....|.
gi 489906778 704 DYWSSVGgypGNGYLVLGGPRTFTLSASMEF 734
Cdd:COG4774 612 RYYASAY---GSGYVTPGAPRTVLLSASYRF 639
|
|
| ligand_gated_channel |
cd01347 |
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ... |
81-734 |
8.67e-122 |
|
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.
Pssm-ID: 238657 [Multi-domain] Cd Length: 635 Bit Score: 378.33 E-value: 8.67e-122
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 81 SITAYTNELIQDRQAKGVGDVLQNDPGVRVARGFGNFQESYFIRGFILSSDDIAYNGLYGLLPRQ-------YISTQLFE 153
Cdd:cd01347 1 SVSVITAEDIEKQPATSLADLLRRIPGVSVTRGGGGGGSTISIRGFGPDRTLVLVDGLPLASSNYgrgvdlnTIPPELIE 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 154 RVEVLRGASAFLTGappsGGGIGGVINLVPKRAPNEPLTRFSAGYGSDSML---EASADIGRRFGPDDSVGIRINAAQRG 230
Cdd:cd01347 81 RVEVLKGPSSALYG----SGAIGGVVNIITKRPTDEFGGSVTAGYGSDNSGssgGGGFDVSGALADDGAFGARLYGAYRD 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 231 GETAI------DGERTRTTVFALGLDWRG-ERARLSADIGYQDNRLKRARPNVTLAGDAAKVPGAPDAGSNYAQPWSYSN 303
Cdd:cd01347 157 GDGTIdgdgqaDDSDEERYNVAGKLDWRPdDDTRLTLDAGYQDQDADGPGGTLPANGTGSSLGGGPSSNTNGDRDWDYRD 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 304 ERDVFGTLRGEYDFNDR-ITGWAAYGMRQSKEENSLANLNGVNGAGQGKF--YRFDNAREDTVNTGEIGLRAKARTGPVG 380
Cdd:cd01347 237 RYRKRASLGLEHDLNDTgWTLRANLSYSYTDNDGDPLILNGGNNAAGGDLgrSGYSSERDTTQLGFDAGLNAPFGTGPVA 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 381 HELVASASYFDLEKKnayvmdffnqfdtsiydpvsyakpaisstafrgndmddpakqgvIRLASYALGDTMSFfDDKVLL 460
Cdd:cd01347 317 HTLTLGVEYRREELD--------------------------------------------EKQTALYAQDTIEL-TDDLTL 351
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 461 TAGIRHQRLYQRDYSYDTGIGGTPYEQSHNSPAAGLVVRVTPQVSLYANYIEALSAGDTAPQTANGLP---VVNHGESLA 537
Cdd:cd01347 352 TLGLRYDHYDQDSKDTIAGGTTAKKSYSHWSPSLGLVYKLTDGLSLYASYSQGFRAPSLGELYGGGSHggtAAVGNPNLK 431
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 538 PYVSKQKEVGVKFEHD-GLGGGLALFSTDKPRGFVGDDQ--------VFRASGKDRHRGVELTTYGELTRSVRVLGGLTW 608
Cdd:cd01347 432 PEKSKQYELGLKYDPGdGLTLSAALFRIDIKNEIVSTPTntglglvtVYVNGGKARIRGVELEASYDLTDGLGLTGSYTY 511
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 609 LDAKQLsTGNAATDGKRVIGVPRFQANLGVEWDIPGvQGLTVDGRVVYTGSSYADAA---NTLEVPGWTRLDAGLRYMTD 685
Cdd:cd01347 512 TDTEVK-RTDGATTGNRLPGIPKHTANLGLDYELPD-EGLTAGGGVRYRGKQYADTAngnNTVKVPGYTLVDLSASYQFT 589
|
650 660 670 680
....*....|....*....|....*....|....*....|....*....
gi 489906778 686 IGghlVTWRARVENIANRDYWSSVGGYPGNGYLVLGGPRTFTLSASMEF 734
Cdd:cd01347 590 KN---LTLRLGVNNLFDKDYYTSLSVRGSGLYGYYGPGRTYYLSVSYKF 635
|
|
| TonB-siderophor |
TIGR01783 |
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of ... |
77-734 |
2.89e-102 |
|
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of TonB-dependent outer membrane siderophore receptors. It has no overlap with TonB receptors known to transport other substances, but is likely incomplete due to lack of characterizations. It is likely that genuine siderophore receptors will be identified which score below the noise cutoff to this model at which point the model should be updated. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273805 [Multi-domain] Cd Length: 651 Bit Score: 327.83 E-value: 2.89e-102
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 77 ETPFSITAYTNELIQDRQAKGVGDVLQNDPGVRVA-RGFGNFQESYFIRGFILSS--DDIAYNGLYGLLPRQY--ISTQL 151
Cdd:TIGR01783 1 DIPQSVSVITRQELEDQQAGSLSEALQRVPGVVVGgSGGTTQFGNITIRGFGLEVdiDNVYLDGVPLLSRGNLaiVDPAM 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 152 FERVEVLRGASAFLTGappsGGGIGGVINLVPKRAPNEPLTRFSAGYGSDSMLEASADIGRRFGPDDSVGIRINAAQRGG 231
Cdd:TIGR01783 81 VERVEVLRGPASLLYG----GSAPGGVINIVTKRPQDEPKGSVTFGAGTRSGYRTAFDLGGPLGADGTFRGRLNGARQDG 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 232 ETAIDGERTRTTVFALGLDWR-GERARLSADIGYQDNRLKRARPNVTLAGDAAKVPGAPDAGSNYAQPWSYSNERDVFGT 310
Cdd:TIGR01783 157 DSFYDGAGEETRLGATATDWQlDDRTLLRLGAYYQKERDRGGYGGLPASGGTSGRDLSSDRYLGTSSNRNYDDREYLSYG 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 311 LRGEYDFNDRITGWAAYGMRQSKEENSLANLNGVNGAGQG---KFYRFDNARedTVNTGEIGLRAKARTGPVGHELVASA 387
Cdd:TIGR01783 237 LSLEYQFNDVWTGKQNLRYSYFDTDSNQVQASGYSSDGGLfgrSLTVVNVKQ--DRVQIDAGLDGEFETGPIEHDLLLGV 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 388 SYFdLEKKNAYVMDFfnQFDTSIYDPVSYAKP-AISSTAFRGNDMDDPAKqgvirlASYALGDTMSFFDDKVLLTAGIRH 466
Cdd:TIGR01783 315 SYG-QRTTNRFNNTG--YPSDNIYSLTATSSArTDIGDSPKDRALSSTTK------ALNGVALQRILLADKWTLTLGGRY 385
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 467 QRLyqrDYSYDTGIGGTPYE--QSHNSPAAGLVVRVTPQVSLYANYIEALSAGDTAPQTANglpvvNHGESLAPYVSKQK 544
Cdd:TIGR01783 386 DSV---DVKSNNGVAGSTGKrdDSQFTPSLGVAYKPTDDWSLYASYAESFKPGGYYPKGAG-----NSGDILEPEKGKNY 457
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 545 EVGVKFE-HDGLGGGLALFSTDKPRGFVGD---DQVFRASGKDRHRGVELTTYGELTRSVRVLGGLTWLDAKQLSTGNAA 620
Cdd:TIGR01783 458 ELGVRYDlGDSLLATAALFRITKDNQLVQDpvnGTFSVNAGKTRNRGVELEARGYLTPGLSLSAGYTYTDAEFTEDTNGD 537
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 621 TDGKRVIGVPRFQANLGVEWDIPGVQ-GLTVDGRVVYTGSSYADAANTLEVPGWTRLDAGLRYMTDIGGHLvTWRARVEN 699
Cdd:TIGR01783 538 TQGNTVPFVPKHTASLWASYAPPVGDnGLTLGGGVQYTGKAYVDGGNTGKVPSYTVVDLSVRYDLTKKKNL-TLALNVNN 616
|
650 660 670
....*....|....*....|....*....|....*
gi 489906778 700 IANRDYWSSVGGYPGNGYLVLGGPRTFTLSASMEF 734
Cdd:TIGR01783 617 LFDRDYYTSGYRWGPSAYIYPGAPRTVGLSVSYDF 651
|
|
| TonB_dep_Rec |
pfam00593 |
TonB dependent receptor; This model now only covers the conserved part of the barrel structure. |
245-733 |
3.33e-39 |
|
TonB dependent receptor; This model now only covers the conserved part of the barrel structure.
Pssm-ID: 395474 [Multi-domain] Cd Length: 475 Bit Score: 151.46 E-value: 3.33e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 245 FALGLDWRGERARLSADIGYQDNRlKRARPNVTLAGDAAKVPGAPDAGSNYAQPWSYSNERDVFGTLRGEYDFND----R 320
Cdd:pfam00593 2 WQLSLDLLGDDTLLTLGYDYSRYT-DGLDLGLTLDGYGNDGGYLGDRPLYYGRDYSDTDRKRLSLGYDYDLGDGLswlsT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 321 ITGWAAYGMRQSKEENSLANLNGVNGAGQGKFYrFDNAREDTVNTGEIGLRAKARTGPVGHELVASasyfdlekknayvm 400
Cdd:pfam00593 81 LRLGLRYSSLDGDYTSNSSGLSGAGDYLSDDRL-YGLYGLDGDLELSLDLSHDLLLGVELRTAGLD-------------- 145
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 401 dfFNQFDTSIYDPVSYAKPAISSTAFRGNDmddpakqgviRLASYALgDTMSFfDDKVLLTAGIRHQRLYQRDYSYDTGI 480
Cdd:pfam00593 146 --YRRLDDDAYDPYDPANPSSSSYSDTTTD----------SYGLYLQ-DNIKL-TDRLTLTLGLRYDHYSTDGDDGNGGG 211
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 481 GGTPYEQSHNSPAAGLVVRVTPQVSLYANYIEALSAGDTAPQTANGLP-----VVNHGESLAPYVSKQKEVGVKFEHDGL 555
Cdd:pfam00593 212 DNFSRSYSAFSPRLGLVYKPTDNLSLYASYSRGFRAPSLGELYGSGSGggggaVAGGNPDLKPETSDNYELGLKYDDGRL 291
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 556 GGGLALFSTDK---------PRGFVGDDQVFRASGKDRHRGVELTTYGELTRSVRVLGGLTWLDAKQlsTGNAATDGKRV 626
Cdd:pfam00593 292 SLSLALFYIDIknlitsdpdGPGLGGTVYTYTNVGKARIRGVELELSGRLWGLGLSGGGYTYTDADD--DADADDTGNPL 369
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 627 IGVPRFQANLGVEWDIPGVQ-GLTVDGRVVYTGSS-YADAANTLEVPGWTRLDAGLRYMTDIGghlVTWRARVENIANRD 704
Cdd:pfam00593 370 PNVPRHTANLGLTYDFPLGGwGARLGARYVGSGERrYGDAANTFKTPGYTLVDLSAGYRLNKN---LTLRLGVNNLFDKY 446
|
490 500
....*....|....*....|....*....
gi 489906778 705 YWSSVGGYPGNGYLVLGGPRTFTLSASME 733
Cdd:pfam00593 447 YKRYYSSGGGNLGGYPGPGRTFYLGLSYK 475
|
|
| PRK14050 |
PRK14050 |
TonB-dependent siderophore receptor; |
36-731 |
2.37e-34 |
|
TonB-dependent siderophore receptor;
Pssm-ID: 237595 [Multi-domain] Cd Length: 728 Bit Score: 140.32 E-value: 2.37e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 36 LDAVRVEASADASAGGLAPAfaGGQVATGAKVGILGTRDNLETPFSITAYTNELIQDRQA-KGVGDVLQNDPGVrVARGF 114
Cdd:PRK14050 39 LETIVVEGGNAASATATGPV--DGYVAKATATGSKTDTPITEIPQSVSVVGRQEMDDRGVtNKVDEALRYTPGV-LSQPF 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 115 GNFQES--YFIRGFILSSDDIAYNGL----YGLLPRQyISTQLFERVEVLRGASAFLTGappsGGGIGGVINLVPKRAPN 188
Cdd:PRK14050 116 GTDGDTdwFYIRGFDATQTGVFLDGLnlfsYGFGGFQ-IDPFMLERVEVLKGPASVLYG----GSNPGGIVNMVSKRPLD 190
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 189 EPLTRFSAGYGSDSMLEASADIGRRFGPDDSVGIRINAAQRGGETAIDG-----------------ERTRTTVFAL--GL 249
Cdd:PRK14050 191 EPLYYTEIGINSYGNAFTGFDVGDKLSDDGTVRYRVTGKVAGGDNYSDYsedlrgfimpqityapdDATSLTVYGYlsGL 270
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 250 DwrgeraRLSADIGYqdnrlkraRPNVtlaGDAAKVP-GAPDAGSNYAQPW--SYSNERDVFGtlrgeYDF-NDRITGW- 324
Cdd:PRK14050 271 D------QVHVGNGF--------LPYV---GTVVDAPfGKIDRDAFYGEPDidNGSYAQQMLG-----YEFsHEFDNGWt 328
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 325 ----AAYGMRQSKEENSLAN--LNGVNGAGQ---GKFY--RFDNAREDTVNTGEIGLRAKAR--TGPVGHELVASA--SY 389
Cdd:PRK14050 329 fsqnARYGHLHKHEKGPYTYgyVGGATGLPDptgPDYMlnRIGFEHRSKVDSFSIDNRLEGEfdTGALTHNLLFGLdyKY 408
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 390 FDLEKKNAYVMDffnqfdTSI--YDPVsYAKPAISSTAFRGNDMddpAKQgviRLASYAlGDTMSFfDDKVLLTAGIRHq 467
Cdd:PRK14050 409 YRLDQVQACCGA------TPIsaTNPV-YGTTQGANFVYLDQIL---TQQ---QIGIYA-QDQIRF-GDGWLVTLNGRY- 472
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 468 rlyqrDYSYDTGIGGTPYEQSHNSPA----AGLVVR----VTPQVSL--YANYIEALSAGDTApqtanglpvvnhgesLA 537
Cdd:PRK14050 473 -----DYVDTDSDARIGTSYESNDGAlsgrAGLAYEfdngLTPYVSAatFFNPLVGTLASGPP---------------LK 532
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 538 PYVSKQKEVGVKFEHDGLGGGL--ALFSTDKPRGFVGDDQVFRAS--GKDRHRGVELTTYGELTRSVRVLGGLTWLDAKQ 613
Cdd:PRK14050 533 PEEGEQYEAGIKYEPSFIDGLItaSVFQITKKNVTVTDPLTFASTqlGEVRSRGFELEGKVNLDDNWKALASFTYTDLEI 612
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 614 LSTGNAATDGKRVIGVPRFQANLGVEWDIP--GVQGLTVDGRVVYTGSSYADAANTLEVPGWTRLDAGLRYMTDigghlv 691
Cdd:PRK14050 613 TEDANPSLIGNSPYLVPETQASLWLDYAVTdgAFEGVSLGAGVRYQGESWADEANTLKVPAATLFDAAIRYEKN------ 686
|
730 740 750 760
....*....|....*....|....*....|....*....|..
gi 489906778 692 TWRA--RVENIANRDYWSSVGGYPGNGYlvlGGPRTFTLSAS 731
Cdd:PRK14050 687 DWGAslNVANLFDKEYVAGCQGLLVCGY---GESRTITLKLS 725
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| Fiu |
COG4774 |
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism]; |
70-734 |
0e+00 |
|
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism];
Pssm-ID: 443806 [Multi-domain] Cd Length: 639 Bit Score: 573.36 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 70 LGTRDNLETPFSITAYTNELIQDRQAKGVGDVLQNDPGVRVARGFGNFQESYFIRGFiLSSDDIAYNGLYgLLPRQYIST 149
Cdd:COG4774 1 KTDTPLLDTPQSVTVVTRELIEDQGATSLADALRNVPGVTFGAGEGGNGDSFSIRGF-SASGDIYVDGLR-DPGQYRRDT 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 150 QLFERVEVLRGASAFLTGAppsgGGIGGVINLVPKRAPNEPLTRFSAGYGSDSMLEASADIGRRFGpdDSVGIRINAAQR 229
Cdd:COG4774 79 FNLERVEVLKGPASVLYGR----GSPGGVINLVTKRPTDEPFTEVTLTYGSDGQRRATLDVNGPLG--DDLAYRLNGMYR 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 230 GGETAIDGERTRTTVFALGLDWR-GERARLSADIGYQDNRLkraRPNVTLAGDAAKVPGAPDAGSNYAQPWSYSNERDVF 308
Cdd:COG4774 153 DSDSYRDGVDNDRWGIAPSLTWRlGDRTRLTLDYEYQDDDR---TPDYGVPAVANGRPVDVDRSTFYGQPDDYSDSETDS 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 309 GTLRGEYDFNDRITGWAAYGMRQSKEENSLANLNGVNGAGQGKFYRFDNAREDTVNTGEIGLRAKARTGPVGHELVASAS 388
Cdd:COG4774 230 ATLRLEHDFNDNWTLRNALRYSDYDRDYRNTYPTGGNATGTVTRSAYRRDQDNDTLSNQTDLTGKFDTGGVKHTLLAGVE 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 389 YFDLEKKNAYVMDFFNQFDTSIYDPVSYAkpaisstAFRGNDMDDPAKQGVIRLASYALGDTMSfFDDKVLLTAGIRHQR 468
Cdd:COG4774 310 YSREDSDNARYSGGGTAPTVNLYNPVYGA-------PVTGPTLGGADNDSRTDTTGLYLQDTIS-LTDRWSLLAGLRYDR 381
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 469 LYQRDYSYDTGIGGTPYEQSHNSPAAGLVVRVTPQVSLYANYIEALSAGDTAPQTANGlpvvnhGESLAPYVSKQKEVGV 548
Cdd:COG4774 382 FDTDYTDRTTGATTSSYDDSAFSPRAGLVYKPTPNLSLYASYSTSFNPGGGAPSLSNA------GQALDPEKSRQYEVGV 455
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 549 KFE--HDGLGGGLALFSTDKPRGFVGD---DQVFRASGKDRHRGVELTTYGELTRSVRVLGGLTWLDAKQLSTGNAATDG 623
Cdd:COG4774 456 KWDllDGRLSLTAALFRIEKTNVRTTDpanPGVYVQTGEQRSRGVELEATGELTPGWSVLAGYTYLDAEITKSANAANVG 535
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 624 KRVIGVPRFQANLGVEWDIPgVQGLTVDGRVVYTGSSYADAANTLEVPGWTRLDAGLRYmtDIGGHlVTWRARVENIANR 703
Cdd:COG4774 536 NRLPNVPRHSASLWTTYDLP-LPGLTLGGGVRYVGSRYADAANTVKLPSYTRFDAGASY--RLNKN-LTLRLNVNNLTDK 611
|
650 660 670
....*....|....*....|....*....|.
gi 489906778 704 DYWSSVGgypGNGYLVLGGPRTFTLSASMEF 734
Cdd:COG4774 612 RYYASAY---GSGYVTPGAPRTVLLSASYRF 639
|
|
| FhuE |
COG4773 |
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion ... |
33-734 |
2.54e-160 |
|
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion transport and metabolism];
Pssm-ID: 443805 [Multi-domain] Cd Length: 692 Bit Score: 479.78 E-value: 2.54e-160
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 33 SITLDAVRVEASADASAGglapaFAGGQVATGAKvgilGTRDNLETPFSITAYTNELIQDRQAKGVGDVLQNDPGVRVAR 112
Cdd:COG4773 29 ATTLPEVTVTGTAEGTGG-----YTAKSSSTATK----LDTPLRETPQSVSVVTRQLIEDQGATTLDDALRNVPGVTVSS 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 113 GFGNFQESYFIRGFilSSDDIAYNGL-YGLLPRQYISTQLFERVEVLRGASAFLTGAppsgGGIGGVINLVPKRAPNEPL 191
Cdd:COG4773 100 YDGGGRDSFSIRGF--SIDNYLRDGLpLGGFGGGQPDTANLERVEVLKGPAGLLYGA----GSPGGLVNLVTKRPTAEPQ 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 192 TRFSAGYGSDSMLEASADIGRRFGPDDSVGIRINAAQRGGETAIDGERTRTTVFALGLDWR-GERARLSADIGYQDNRLK 270
Cdd:COG4773 174 GEVSLSAGSWDTYRATADVGGPLNEDGTLRYRLNAAYEDGDSFRDGVDNRRTLIAPSLDWDlTDDTTLTLGAEYQDDDST 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 271 RARPNVTLAGDAAKVPgapdAGSNYAQPWSYSNERDVFGTLRGEYDFNDRITGWAAYGMRQSKEENSLANLNGVNGAGQG 350
Cdd:COG4773 254 GDRGFLPLDGTLLDLP----RSTNLGEPWDYYDTETTTLFAELEHRFNDDWSLRANARYSDSDRDGRSAYAYGAPDAATG 329
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 351 KFYR--FDNAREDTVNTGEIGLRAKARTGPVGHELVASASYFDLEKKNAYvmdfFNQFDTSIYDPV--SYAKPAISSTAF 426
Cdd:COG4773 330 TLTRyaSARDGDSRSDSLDANLNGKFETGGLEHTLLVGADYSRYDSDSDS----ATAGTINIYNPVygNLPEPDFDASDT 405
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 427 RGNdmddpakqgvIRLASYALGDTMSFFdDKVLLTAGIRHQRLYQRDYSYDTGiGGTPYEQSHNSPAAGLVVRVTPQVSL 506
Cdd:COG4773 406 DTT----------TRQTGLYAQDQISLT-DRLSLLLGGRYDWYETDSTNRLGG-STTSYDDSAFTPRAGLVYDLTPGLSL 473
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 507 YANYIEALSagdtaPQTAnglpVVNHGESLAPYVSKQKEVGVKFE--HDGLGGGLALFSTDKPRGFVGD---DQVFRASG 581
Cdd:COG4773 474 YASYSESFE-----PQSG----ADNNGNPLDPETGKQYEAGVKGElfDGRLNATLAVFDITQKNVATTDpdnPNFYVQVG 544
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 582 KDRHRGVELTTYGELTRSVRVLGGLTWLDAKQLSTgNAATDGKRVIGVPRFQANLGVEWDIPGV--QGLTVDGRVVYTGS 659
Cdd:COG4773 545 EVRSRGVELELSGELTPGLNLIAGYTYTDAKITKD-ADALEGKRLTNVPRHTASLWTTYRFPSGalKGLGLGGGVRYVGE 623
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 489906778 660 SYADAANTLEVPGWTRLDAGLRYmtDIGGHLvTWRARVENIANRDYWSSVGGYpgnGYLVLGGPRTFTLSASMEF 734
Cdd:COG4773 624 RYGDAANTFTLPSYTLVDAGARY--DLGKNW-TLQLNVNNLFDKKYYASSGSR---GYVYYGAPRNVRLSLSYKF 692
|
|
| ligand_gated_channel |
cd01347 |
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ... |
81-734 |
8.67e-122 |
|
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.
Pssm-ID: 238657 [Multi-domain] Cd Length: 635 Bit Score: 378.33 E-value: 8.67e-122
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 81 SITAYTNELIQDRQAKGVGDVLQNDPGVRVARGFGNFQESYFIRGFILSSDDIAYNGLYGLLPRQ-------YISTQLFE 153
Cdd:cd01347 1 SVSVITAEDIEKQPATSLADLLRRIPGVSVTRGGGGGGSTISIRGFGPDRTLVLVDGLPLASSNYgrgvdlnTIPPELIE 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 154 RVEVLRGASAFLTGappsGGGIGGVINLVPKRAPNEPLTRFSAGYGSDSML---EASADIGRRFGPDDSVGIRINAAQRG 230
Cdd:cd01347 81 RVEVLKGPSSALYG----SGAIGGVVNIITKRPTDEFGGSVTAGYGSDNSGssgGGGFDVSGALADDGAFGARLYGAYRD 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 231 GETAI------DGERTRTTVFALGLDWRG-ERARLSADIGYQDNRLKRARPNVTLAGDAAKVPGAPDAGSNYAQPWSYSN 303
Cdd:cd01347 157 GDGTIdgdgqaDDSDEERYNVAGKLDWRPdDDTRLTLDAGYQDQDADGPGGTLPANGTGSSLGGGPSSNTNGDRDWDYRD 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 304 ERDVFGTLRGEYDFNDR-ITGWAAYGMRQSKEENSLANLNGVNGAGQGKF--YRFDNAREDTVNTGEIGLRAKARTGPVG 380
Cdd:cd01347 237 RYRKRASLGLEHDLNDTgWTLRANLSYSYTDNDGDPLILNGGNNAAGGDLgrSGYSSERDTTQLGFDAGLNAPFGTGPVA 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 381 HELVASASYFDLEKKnayvmdffnqfdtsiydpvsyakpaisstafrgndmddpakqgvIRLASYALGDTMSFfDDKVLL 460
Cdd:cd01347 317 HTLTLGVEYRREELD--------------------------------------------EKQTALYAQDTIEL-TDDLTL 351
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 461 TAGIRHQRLYQRDYSYDTGIGGTPYEQSHNSPAAGLVVRVTPQVSLYANYIEALSAGDTAPQTANGLP---VVNHGESLA 537
Cdd:cd01347 352 TLGLRYDHYDQDSKDTIAGGTTAKKSYSHWSPSLGLVYKLTDGLSLYASYSQGFRAPSLGELYGGGSHggtAAVGNPNLK 431
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 538 PYVSKQKEVGVKFEHD-GLGGGLALFSTDKPRGFVGDDQ--------VFRASGKDRHRGVELTTYGELTRSVRVLGGLTW 608
Cdd:cd01347 432 PEKSKQYELGLKYDPGdGLTLSAALFRIDIKNEIVSTPTntglglvtVYVNGGKARIRGVELEASYDLTDGLGLTGSYTY 511
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 609 LDAKQLsTGNAATDGKRVIGVPRFQANLGVEWDIPGvQGLTVDGRVVYTGSSYADAA---NTLEVPGWTRLDAGLRYMTD 685
Cdd:cd01347 512 TDTEVK-RTDGATTGNRLPGIPKHTANLGLDYELPD-EGLTAGGGVRYRGKQYADTAngnNTVKVPGYTLVDLSASYQFT 589
|
650 660 670 680
....*....|....*....|....*....|....*....|....*....
gi 489906778 686 IGghlVTWRARVENIANRDYWSSVGGYPGNGYLVLGGPRTFTLSASMEF 734
Cdd:cd01347 590 KN---LTLRLGVNNLFDKDYYTSLSVRGSGLYGYYGPGRTYYLSVSYKF 635
|
|
| TonB-siderophor |
TIGR01783 |
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of ... |
77-734 |
2.89e-102 |
|
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of TonB-dependent outer membrane siderophore receptors. It has no overlap with TonB receptors known to transport other substances, but is likely incomplete due to lack of characterizations. It is likely that genuine siderophore receptors will be identified which score below the noise cutoff to this model at which point the model should be updated. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273805 [Multi-domain] Cd Length: 651 Bit Score: 327.83 E-value: 2.89e-102
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 77 ETPFSITAYTNELIQDRQAKGVGDVLQNDPGVRVA-RGFGNFQESYFIRGFILSS--DDIAYNGLYGLLPRQY--ISTQL 151
Cdd:TIGR01783 1 DIPQSVSVITRQELEDQQAGSLSEALQRVPGVVVGgSGGTTQFGNITIRGFGLEVdiDNVYLDGVPLLSRGNLaiVDPAM 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 152 FERVEVLRGASAFLTGappsGGGIGGVINLVPKRAPNEPLTRFSAGYGSDSMLEASADIGRRFGPDDSVGIRINAAQRGG 231
Cdd:TIGR01783 81 VERVEVLRGPASLLYG----GSAPGGVINIVTKRPQDEPKGSVTFGAGTRSGYRTAFDLGGPLGADGTFRGRLNGARQDG 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 232 ETAIDGERTRTTVFALGLDWR-GERARLSADIGYQDNRLKRARPNVTLAGDAAKVPGAPDAGSNYAQPWSYSNERDVFGT 310
Cdd:TIGR01783 157 DSFYDGAGEETRLGATATDWQlDDRTLLRLGAYYQKERDRGGYGGLPASGGTSGRDLSSDRYLGTSSNRNYDDREYLSYG 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 311 LRGEYDFNDRITGWAAYGMRQSKEENSLANLNGVNGAGQG---KFYRFDNARedTVNTGEIGLRAKARTGPVGHELVASA 387
Cdd:TIGR01783 237 LSLEYQFNDVWTGKQNLRYSYFDTDSNQVQASGYSSDGGLfgrSLTVVNVKQ--DRVQIDAGLDGEFETGPIEHDLLLGV 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 388 SYFdLEKKNAYVMDFfnQFDTSIYDPVSYAKP-AISSTAFRGNDMDDPAKqgvirlASYALGDTMSFFDDKVLLTAGIRH 466
Cdd:TIGR01783 315 SYG-QRTTNRFNNTG--YPSDNIYSLTATSSArTDIGDSPKDRALSSTTK------ALNGVALQRILLADKWTLTLGGRY 385
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 467 QRLyqrDYSYDTGIGGTPYE--QSHNSPAAGLVVRVTPQVSLYANYIEALSAGDTAPQTANglpvvNHGESLAPYVSKQK 544
Cdd:TIGR01783 386 DSV---DVKSNNGVAGSTGKrdDSQFTPSLGVAYKPTDDWSLYASYAESFKPGGYYPKGAG-----NSGDILEPEKGKNY 457
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 545 EVGVKFE-HDGLGGGLALFSTDKPRGFVGD---DQVFRASGKDRHRGVELTTYGELTRSVRVLGGLTWLDAKQLSTGNAA 620
Cdd:TIGR01783 458 ELGVRYDlGDSLLATAALFRITKDNQLVQDpvnGTFSVNAGKTRNRGVELEARGYLTPGLSLSAGYTYTDAEFTEDTNGD 537
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 621 TDGKRVIGVPRFQANLGVEWDIPGVQ-GLTVDGRVVYTGSSYADAANTLEVPGWTRLDAGLRYMTDIGGHLvTWRARVEN 699
Cdd:TIGR01783 538 TQGNTVPFVPKHTASLWASYAPPVGDnGLTLGGGVQYTGKAYVDGGNTGKVPSYTVVDLSVRYDLTKKKNL-TLALNVNN 616
|
650 660 670
....*....|....*....|....*....|....*
gi 489906778 700 IANRDYWSSVGGYPGNGYLVLGGPRTFTLSASMEF 734
Cdd:TIGR01783 617 LFDRDYYTSGYRWGPSAYIYPGAPRTVGLSVSYDF 651
|
|
| CirA |
COG1629 |
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism]; |
77-720 |
6.46e-73 |
|
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism];
Pssm-ID: 441236 [Multi-domain] Cd Length: 644 Bit Score: 249.36 E-value: 6.46e-73
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 77 ETPFSITAYTNELIQDRQAKGVGDVLQNDPGVRVaRGFGNFQESYFIRGFILSSDDIAY--------NGLYGLLPRQYIS 148
Cdd:COG1629 17 DVPGSVSVISREQLEDQPATDLGDLLRRVPGVSV-TSAGGGAGQISIRGFGGGGNRVLVlvdgvplnDPSGGDGGLSYID 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 149 TQLFERVEVLRGASAFLTGAppsgGGIGGVINLVPKRAPNEPLTRFSAGYGSDSMLEASADIGrrfGPDDSVGIRINAAQ 228
Cdd:COG1629 96 PEDIERVEVLRGPSSALYGS----GALGGVINIVTKKPKDGKGGEVSASYGSYGTYRASLSLS---GGNGKLAYRLSASY 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 229 RGGETAIDGERTRTTVFALGLDWR-GERARLSADIGYQDNRLKRARPnvtLAGDAAKVPGAPDAGSNYAQpWSYSNERDV 307
Cdd:COG1629 169 RDSDGYRDNSDSDRYNLRAKLGYQlGDDTRLTLSASYSDSDQDSPGY---LTLAALRPRGAMDDGTNPYS-NDTDDNTRD 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 308 FGTLRGEYD-FNDRITGWAAYGMRQSKEENSLANLNGVNGAGQGKFYRFDNaredTVNTGEIGLRAKARTGPvGHELVAS 386
Cdd:COG1629 245 RYSLSLEYEhLGDGLKLSASAYYRYDDTDLDSDFTPTPADGGTLEQTDFDN----RTYGLELRLTYDLGFGG-KHTLLVG 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 387 ASYFDlekknayvmdffNQFDTSIYDPVSYAKPAISSTAFRGNDMDdpakqgvIRLASYALGDTMSfFDDKVLLTAGIRH 466
Cdd:COG1629 320 LDYQR------------QDLDGSGYPLDLGSGSLPTLTSGADDDGT-------TTSLALYAQDTYK-LTDKLTLTAGLRY 379
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 467 QRLYQRDYSYDTGIGGTPYEQS--HNSPAAGLVVRVTPQVSLYANYIEALSAGDTAPQTANGLPVVNHG-ESLAPYVSKQ 543
Cdd:COG1629 380 DYVSYDVDDTVTGTDSASGSRSysAFSPSLGLTYQLSPNLSLYASYSRGFRAPTFGELYANGTDPYSVGnPDLKPETSTN 459
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 544 KEVGVKFEH--DGLGGGLALFSTDK--------PRGFVGDDQVFRASGKDRHRGVELTTYGELTRSVRVLGGLTWLDAKQ 613
Cdd:COG1629 460 YELGLRYRLldGRLSLSLALFYSDVdneilsvpLPNDSGFSTYYTNAGKARSYGVELELSYQLTPGLSLNASYSYTDAKF 539
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 614 LS--TGNAATDGKRVIGVPRFQANLGVEWDIPGvqGLTVDGRVVYTGSSYADAANTLEVP-GWTRLDAGLRYmtDIGGHL 690
Cdd:COG1629 540 DDdtDGSADLDGNRLPGVPPLTANLGLTYEFPG--GWSLGLGVRYVGDRYLDDANTQGAPgGYTLVDLGAGY--RFGDNL 615
|
650 660 670
....*....|....*....|....*....|
gi 489906778 691 vTWRARVENIANRDYWSSVGGYPGNGYLVL 720
Cdd:COG1629 616 -TLSLGVDNLFDKKYATSLSVRASNVRGFL 644
|
|
| FecA |
COG4772 |
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism]; |
47-734 |
3.92e-50 |
|
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism];
Pssm-ID: 443804 [Multi-domain] Cd Length: 681 Bit Score: 186.67 E-value: 3.92e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 47 ASAGGLAPAFAGGQVATGAKVGILGTRDNL----ETPFSITAYTNELIQDRQAKGVGDVLQNDPGVRVA----------- 111
Cdd:COG4772 6 AAALLLAAAAAAEAATTLETVVVTGSRAAEarlkDVPGSVSVVDREELENQAATSLREVLRRVPGVNVQeedgfglrpni 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 112 --RGFGnfqeSYFIRGFILSSDDIayngLYGLLPRQYISTQLF------ERVEVLRGASAFLTGAppsgGGIGGVINLVP 183
Cdd:COG4772 86 giRGLG----PRRSRGITLLEDGI----PIAPAPYGDPAAYYFpdlermERIEVLRGAAALRYGP----QTVGGAINFVT 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 184 KRAPNEPLTRFSAGYGSDSMLEASADIGRRFGPddsVGIRINAAQRGGETAIDGERTRTTVFALGLDWR-GERARLSADI 262
Cdd:COG4772 154 RTIPTAFGGELRVTGGSFGYRRTHASVGGTVGN---FGYLVEYSRKRGDGFRDNSGFDINDFNAKLGYRlSDRQELTLKF 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 263 GYQDNRlkrarpnvtlagdaAKVPG-------APDAGSNYAQPWSYSNERDVFGtLRGEYDFNDR----ITGWAAYGMRq 331
Cdd:COG4772 231 QYYDED--------------ANTPGgltdaqfDADPRQSYRPADQFDTRRTQLS-LRYEHQLSDNttltTTAYYNDFSR- 294
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 332 skeeNSLANLNGVNgAGQGKFYRFDNAREDTVNTGEIGLRAKARTGPVGHELVASASYFDLEkknayvMDFFNQFDTSiy 411
Cdd:COG4772 295 ----NWYIRQNTAD-PNTPGLGLRGNPRGYRSYGIEPRLTHRFELGGVPHTLEVGLRYHREE------EDRKQYVNTY-- 361
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 412 dpvsyakPAISSTAFRGNDMDDPAKQgvirLASYALgDTMSFfDDKVLLTAGIRHQ--RLYQRDYSYDTGIGGTPYEQSH 489
Cdd:COG4772 362 -------GQGRSGAGLRRDRRFSADA----LAAYAQ-NRFEL-TGRLTLTPGLRYEhiRRDRTDRYSTRTGGDDSGSNSY 428
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 490 N--SPAAGLVVRVTPQVSLYANYIEALSAgdtaPQTANGLPVVNHGESLAPYVSKQKEVGVKFEHD-GLGGGLALFSTD- 565
Cdd:COG4772 429 SefLPGLGLLYQLTDNLQLYANVSRGFEP----PTFGDLAYGNGGNPDLKPEKSWNYELGTRGRIGnGLSAEVALFYIDy 504
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 566 -----KPRGFVGDDQVFRASGKDRHRGVELTTYGEL----TRSVRVLGGLTWLDAKQLSTGNAATDGKRVIGVPRFQANL 636
Cdd:COG4772 505 dnelgSCSAAGGDRSTFTNAGETRHQGLELALDYDLlkggGLGLPLFAAYTYTDAEFTSDFGPVFAGNRLPYVPRHQLTA 584
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 637 GVEWDipgVQGLTVDGRVVYTGSSYADAANTL------EVPGWTRLDAGLRYmtDIGGHLvTWRARVENIANRDYWSSVG 710
Cdd:COG4772 585 GLGYE---HGGWTANLNGRYVSEQFTDAANTVadgsfgKIPSYTVLDLSASY--DFGKNL-SLFAGVNNLFDKRYIASRA 658
|
730 740
....*....|....*....|....
gi 489906778 711 GYPGNGYLVlGGPRTFTLSASMEF 734
Cdd:COG4772 659 PNYAAGIRP-GPPRTVYAGLRLKF 681
|
|
| TonB_dep_Rec |
pfam00593 |
TonB dependent receptor; This model now only covers the conserved part of the barrel structure. |
245-733 |
3.33e-39 |
|
TonB dependent receptor; This model now only covers the conserved part of the barrel structure.
Pssm-ID: 395474 [Multi-domain] Cd Length: 475 Bit Score: 151.46 E-value: 3.33e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 245 FALGLDWRGERARLSADIGYQDNRlKRARPNVTLAGDAAKVPGAPDAGSNYAQPWSYSNERDVFGTLRGEYDFND----R 320
Cdd:pfam00593 2 WQLSLDLLGDDTLLTLGYDYSRYT-DGLDLGLTLDGYGNDGGYLGDRPLYYGRDYSDTDRKRLSLGYDYDLGDGLswlsT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 321 ITGWAAYGMRQSKEENSLANLNGVNGAGQGKFYrFDNAREDTVNTGEIGLRAKARTGPVGHELVASasyfdlekknayvm 400
Cdd:pfam00593 81 LRLGLRYSSLDGDYTSNSSGLSGAGDYLSDDRL-YGLYGLDGDLELSLDLSHDLLLGVELRTAGLD-------------- 145
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 401 dfFNQFDTSIYDPVSYAKPAISSTAFRGNDmddpakqgviRLASYALgDTMSFfDDKVLLTAGIRHQRLYQRDYSYDTGI 480
Cdd:pfam00593 146 --YRRLDDDAYDPYDPANPSSSSYSDTTTD----------SYGLYLQ-DNIKL-TDRLTLTLGLRYDHYSTDGDDGNGGG 211
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 481 GGTPYEQSHNSPAAGLVVRVTPQVSLYANYIEALSAGDTAPQTANGLP-----VVNHGESLAPYVSKQKEVGVKFEHDGL 555
Cdd:pfam00593 212 DNFSRSYSAFSPRLGLVYKPTDNLSLYASYSRGFRAPSLGELYGSGSGggggaVAGGNPDLKPETSDNYELGLKYDDGRL 291
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 556 GGGLALFSTDK---------PRGFVGDDQVFRASGKDRHRGVELTTYGELTRSVRVLGGLTWLDAKQlsTGNAATDGKRV 626
Cdd:pfam00593 292 SLSLALFYIDIknlitsdpdGPGLGGTVYTYTNVGKARIRGVELELSGRLWGLGLSGGGYTYTDADD--DADADDTGNPL 369
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 627 IGVPRFQANLGVEWDIPGVQ-GLTVDGRVVYTGSS-YADAANTLEVPGWTRLDAGLRYMTDIGghlVTWRARVENIANRD 704
Cdd:pfam00593 370 PNVPRHTANLGLTYDFPLGGwGARLGARYVGSGERrYGDAANTFKTPGYTLVDLSAGYRLNKN---LTLRLGVNNLFDKY 446
|
490 500
....*....|....*....|....*....
gi 489906778 705 YWSSVGGYPGNGYLVLGGPRTFTLSASME 733
Cdd:pfam00593 447 YKRYYSSGGGNLGGYPGPGRTFYLGLSYK 475
|
|
| FepA |
COG4771 |
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and ... |
77-682 |
1.43e-38 |
|
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and metabolism];
Pssm-ID: 443803 [Multi-domain] Cd Length: 612 Bit Score: 151.93 E-value: 1.43e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 77 ETPFSITAYTNELIQDRQAKGVGDVLQNDPGVRVARGFGNFQESYF-IRGF------IL----SSDDIAYNGLYGLlprQ 145
Cdd:COG4771 43 DAPASVSVITAEEIEKLGATDLADALRLLPGVSVTRSGGRGGSSGIsIRGLggdrvlVLidgvPVNNPALGGGGDL---S 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 146 YISTQLFERVEVLRGASAFLTGAppsgGGIGGVINLVPKRAPNEPLTRFSAGYGS--DSMLEASADIGrrfGPDDSVGIR 223
Cdd:COG4771 120 YIPPDDIERIEVIRGPASALYGS----DAIGGVINIITKKPTDELEGSVSLGYGSngNGTYSGSLSLG---GPGDKLSFL 192
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 224 INAAQRGGETAID--------GERTRTTVFALGLDWR-GERARLSADIGYQDNRLKRARPNvtlagdaakvPGAPDAGSN 294
Cdd:COG4771 193 LSGSYRDRDGYLDyrnggfvgNSGYERYNLNAKLGYRlSDNHRLSLSGGYSRQDRDGGPPT----------LGDTEISSD 262
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 295 YAQPWSYSNERDVFgTLRGEYDFNDRITGWAAYGMrqskeenslANLNGVNGAGQGKFYRFDNAREDTvntgeIGLRAKA 374
Cdd:COG4771 263 NAGDRDTTTDRGNY-SLRYNGDLGDNLDLSLYYSR---------TDRDSTNGSLGGSTGSFSDSDDTT-----YGLELDL 327
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 375 RTGP-VGHELVASASYFDLEkknayvmdffnqfdtsiydpvsyakpaisstaFRGNDMDDPAKQGVIRLASYAlGDTMSf 453
Cdd:COG4771 328 TYPLgGNHTLTLGAEYRYDD--------------------------------LDSSSFLGGADASRDTYGLFA-QDEWK- 373
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 454 FDDKVLLTAGIRhqrlyqrdYSYDTGIGGTPYeqSHNSPAAGLVVRVTPQVSLYANYIEALSAGDTAPQTANGLPVVNHG 533
Cdd:COG4771 374 LTDKLTLTAGLR--------YDYYSTFGASNY--TAFSPRLGLRYDLSDNLTLRASYGRGFRAPSLAELYGSGTGTPGRY 443
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 534 ----ESLAPYVSKQKEVGV--KFEHDGLGGGLALFSTD--------KPRGFVGDDQVFRASGKDRHRGVELTTYGELTRS 599
Cdd:COG4771 444 vlgnPDLKPETSDNYELGLeyRLGNGGLSLSLTGFYTDikdlivlvPVGPGPGDVLQYENVGKARTYGLELELKYRLGKG 523
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 600 VRVLGGLTWLDAKQlstgNAATDGKRVIGVPRFQANLGVEWDIPGVQGLTVDGRVVY-TGSSYADAANTLEVPGWTRLDA 678
Cdd:COG4771 524 LTLTASYTYLDSKI----DDGDTGEPLPNVPPHKANLGLDYRLPKWWLLLLLTRYYGgRYVTPPSGRLEGYTPGYTLLDL 599
|
....
gi 489906778 679 GLRY 682
Cdd:COG4771 600 RASY 603
|
|
| PRK14050 |
PRK14050 |
TonB-dependent siderophore receptor; |
36-731 |
2.37e-34 |
|
TonB-dependent siderophore receptor;
Pssm-ID: 237595 [Multi-domain] Cd Length: 728 Bit Score: 140.32 E-value: 2.37e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 36 LDAVRVEASADASAGGLAPAfaGGQVATGAKVGILGTRDNLETPFSITAYTNELIQDRQA-KGVGDVLQNDPGVrVARGF 114
Cdd:PRK14050 39 LETIVVEGGNAASATATGPV--DGYVAKATATGSKTDTPITEIPQSVSVVGRQEMDDRGVtNKVDEALRYTPGV-LSQPF 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 115 GNFQES--YFIRGFILSSDDIAYNGL----YGLLPRQyISTQLFERVEVLRGASAFLTGappsGGGIGGVINLVPKRAPN 188
Cdd:PRK14050 116 GTDGDTdwFYIRGFDATQTGVFLDGLnlfsYGFGGFQ-IDPFMLERVEVLKGPASVLYG----GSNPGGIVNMVSKRPLD 190
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 189 EPLTRFSAGYGSDSMLEASADIGRRFGPDDSVGIRINAAQRGGETAIDG-----------------ERTRTTVFAL--GL 249
Cdd:PRK14050 191 EPLYYTEIGINSYGNAFTGFDVGDKLSDDGTVRYRVTGKVAGGDNYSDYsedlrgfimpqityapdDATSLTVYGYlsGL 270
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 250 DwrgeraRLSADIGYqdnrlkraRPNVtlaGDAAKVP-GAPDAGSNYAQPW--SYSNERDVFGtlrgeYDF-NDRITGW- 324
Cdd:PRK14050 271 D------QVHVGNGF--------LPYV---GTVVDAPfGKIDRDAFYGEPDidNGSYAQQMLG-----YEFsHEFDNGWt 328
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 325 ----AAYGMRQSKEENSLAN--LNGVNGAGQ---GKFY--RFDNAREDTVNTGEIGLRAKAR--TGPVGHELVASA--SY 389
Cdd:PRK14050 329 fsqnARYGHLHKHEKGPYTYgyVGGATGLPDptgPDYMlnRIGFEHRSKVDSFSIDNRLEGEfdTGALTHNLLFGLdyKY 408
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 390 FDLEKKNAYVMDffnqfdTSI--YDPVsYAKPAISSTAFRGNDMddpAKQgviRLASYAlGDTMSFfDDKVLLTAGIRHq 467
Cdd:PRK14050 409 YRLDQVQACCGA------TPIsaTNPV-YGTTQGANFVYLDQIL---TQQ---QIGIYA-QDQIRF-GDGWLVTLNGRY- 472
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 468 rlyqrDYSYDTGIGGTPYEQSHNSPA----AGLVVR----VTPQVSL--YANYIEALSAGDTApqtanglpvvnhgesLA 537
Cdd:PRK14050 473 -----DYVDTDSDARIGTSYESNDGAlsgrAGLAYEfdngLTPYVSAatFFNPLVGTLASGPP---------------LK 532
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 538 PYVSKQKEVGVKFEHDGLGGGL--ALFSTDKPRGFVGDDQVFRAS--GKDRHRGVELTTYGELTRSVRVLGGLTWLDAKQ 613
Cdd:PRK14050 533 PEEGEQYEAGIKYEPSFIDGLItaSVFQITKKNVTVTDPLTFASTqlGEVRSRGFELEGKVNLDDNWKALASFTYTDLEI 612
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 614 LSTGNAATDGKRVIGVPRFQANLGVEWDIP--GVQGLTVDGRVVYTGSSYADAANTLEVPGWTRLDAGLRYMTDigghlv 691
Cdd:PRK14050 613 TEDANPSLIGNSPYLVPETQASLWLDYAVTdgAFEGVSLGAGVRYQGESWADEANTLKVPAATLFDAAIRYEKN------ 686
|
730 740 750 760
....*....|....*....|....*....|....*....|..
gi 489906778 692 TWRA--RVENIANRDYWSSVGGYPGNGYlvlGGPRTFTLSAS 731
Cdd:PRK14050 687 DWGAslNVANLFDKEYVAGCQGLLVCGY---GESRTITLKLS 725
|
|
| PRK09840 |
PRK09840 |
catecholate siderophore receptor Fiu; Provisional |
33-734 |
1.61e-32 |
|
catecholate siderophore receptor Fiu; Provisional
Pssm-ID: 182105 [Multi-domain] Cd Length: 761 Bit Score: 134.55 E-value: 1.61e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 33 SITLDAVRVEASADASAGGLAPAFAGGQVATGAKVGILG----TRDNLETPFSITAYTNELIQDRQAKGVGDVLQNDPGV 108
Cdd:PRK09840 22 CIGITPVAQALAAEGQTNADDTLVVEASTPSLYAPDQSAdpkfSQPLADTTQTITVISEQVIKDQGATNLTEALRNVPGV 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 109 RV----ARGFGNFQESYFIRGFIlSSDDIAYNGLYGLlprQYISTQLF--ERVEVLRGASAFLTG-APPSGGgiggvINL 181
Cdd:PRK09840 102 GTffagENGNTTTGDAIYMRGFD-TSNSIYVDGIRDI---GSISRDTFntEQVEVIKGPSGTDYGrSAPTGS-----INM 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 182 VPKRAPNEPLTRFSAGYGSDSMLEASADIGRRFGPDDSVgiRINA-AQRGGETAIDG-ERTRTTV---FALGLdwrGERA 256
Cdd:PRK09840 173 ISKQPRNDSGIDASASIGSAWFRRGTLDVNQVIGDTTAV--RLNVmGEKTHDAGRDKvKNERYGVapsVAFGL---GTAN 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 257 RLSADIGY--QDNRLKRARPNVTLAGDAAKVPGAP--------DAGSNYAQPWSYSNERDVFGTLRGEYDFNDR-----I 321
Cdd:PRK09840 248 RLYLNYLHvtQNNTPDGGIPTIGLPGYSAPSAGRAalnhagkvDTHNFYGTDSDYDDSTTDTATMRFEHDINDNttlrnT 327
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 322 TGWAaygmrQSKEE-------NSLANLNGVNGAGQGKFY--RFDNARE--DTVNTGEIGLRAKARTGPVGHELVASASyF 390
Cdd:PRK09840 328 TRWS-----RVKQDylltaimGGASNITTPTPSDVNTWTwsRTANTKDvsNKILTNQTNLTSTFYTGSIGHDVSTGVE-F 401
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 391 DLEKKNAYVMDFFNQFDTSIYDPVSYakpaISSTAFRGNDMDdpAKQGVIRLASYALgDTMSFfDDKVLLTAGIRHQRlY 470
Cdd:PRK09840 402 TRETQTNYGVNPVTLPAVNLYHPDSS----IHPGGLTRNGAN--ANGQTDTFAIYAF-DTLQL-TRDWELNGGIRLDN-Y 472
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 471 QRDYSYDTGIGGT-------PYEQSHNSPA---------------AGLVVRVTPQVSLYANYieALS-----------AG 517
Cdd:PRK09840 473 HTEYDSATACGGSgrgaitcPAGVAKGSPVttvdtaksgnlvnwkAGALYKLTENGNVYINY--AVSqqppggsnfalAQ 550
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 518 DTAPQTANGlpvvnhgESLAPYVSKQKEVGVKFE--HDGLGGGLALFSTDKPRGFVGD-DQVFRASGKDRHRGVELTTYG 594
Cdd:PRK09840 551 SGSGNSANR-------TDFKPQKANTSEIGTKWQvlDKRLLLTAALFRTDIENEVEQNdDGTYSQYGKKRVEGYELSVAG 623
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 595 ELTRSVRVLGGLTWLDAKQLSTGNAATDGKRVIG-VPRFQANLGVEWDIPGvqGLTVDGRVVYTGSSYADAANTLEVPGW 673
Cdd:PRK09840 624 NITPAWQVIAGYTQQKATVKNGKDVAQDGSSSLPyTPEHAFTLWSQYQATD--DLSVGGGARYIGSMHRGSDGAVGTPAF 701
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 489906778 674 TR----LDAGLRYMTDIGghlVTWRARVENIANRDYWSSVGgypGNGYLVL-GGPRTFTLSASMEF 734
Cdd:PRK09840 702 TEgywvADAKLGYRVNRN---LDLQLNVYNLFDTDYVASIN---KSGYRYHpGEPRTFLLTANMHF 761
|
|
| PRK10044 |
PRK10044 |
ferrichrome outer membrane transporter; Provisional |
33-708 |
8.83e-30 |
|
ferrichrome outer membrane transporter; Provisional
Pssm-ID: 236643 [Multi-domain] Cd Length: 727 Bit Score: 126.03 E-value: 8.83e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 33 SITLDAvrvEASADASAGGLAPAFAGGQVATGAKvgilgTRDNLE-TPFSITAYTNELIQDRQAKGVGDVLQNDPGVRVA 111
Cdd:PRK10044 41 TITVTA---APAPQESAWGPAATIAAKRSATGTK-----TDTPIEkTPQSISVVTAEEMALHQPKSVKEALSYTPGVSVG 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 112 -RGFGNFQESYFIRGFILS--SDDIAYNGLyGLLPRQY----ISTQLFERVEVLRGASAFLTG-APPsgggiGGVINLVP 183
Cdd:PRK10044 113 tRGASNTYDHLIIRGFAASgqSQNNYLDGL-KLQGNFYndavIDPYMLERAELMRGPVSVLYGkSNP-----GGLLNMVS 186
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 184 KRAPNEPLTRFSAGYGSDSMLEASADIGRRFGPDDSVGIRINAAQRGGETAIDGERTRTTVFALGLDWR-GERARLS--- 259
Cdd:PRK10044 187 KRPTTEPLKEVQFKMGTDNLFQTGFDFSDALDDDGVYSYRLTGLARSANAQQKGSEEQRYAIAPSFTWRpDDKTNFTfls 266
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 260 -----ADIGYQdNRLKRARPNVTLAgDAAKVPGAPDAG--SNyaqpwSYSNERDVFGtLRGEYDFNDRITgwAAYGMRQS 332
Cdd:PRK10044 267 yfqnePETGYY-GWLPKEGTVEPLP-NGKRLPTDFNEGakNN-----TYSRNEKMVG-YSFDHEFNDTFT--VRQNLRYA 336
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 333 KEENSLANL--NGVNGAGQGKFYR-FDNARED----TVNTGeigLRAKARTGPVGHELVASASYfdLEKKNayvmDFFNQ 405
Cdd:PRK10044 337 ENKTSQRSVygYGVCSDKGHYLNRgYVVDDEKlqnfSVDTQ---LQSKFATGDVDHTLLTGVDF--MRMRN----DINAW 407
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 406 FDTSiyDPVS----YAKPAISstaFRGNDMDDPAKQgVIRLASYAL--GDTMSFfdDKVLLTAGIRH----QRLYQRDYS 475
Cdd:PRK10044 408 FGYA--DSVPllnlYGPVNTD---FDFNANSGPYQI-LNKQKQTGLyvQDQAEW--DKWLVTLGGRYdwadQSSLNRVNG 479
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 476 YD--------TGIGGTPYEQSHNspaaglvvrVTPqvslYANYIEAL--SAGDTAPqtanglpvvnhGESLAPYVSKQKE 545
Cdd:PRK10044 480 TTdkrddkqfTWRGGVNYLFDNG---------ITP----YFSYSESFepSSGTGKD-----------GNIFAPSKGKQYE 535
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 546 VGVKFEHDG--LGGGLALFSTDKPRGFVGD--DQVFRA-SGKDRHRGVELTTYGELTRSVRVLGGLTWLDAKQlsTGNAA 620
Cdd:PRK10044 536 AGVKYVPKDrpIVVTGAVYQLTKTNNLTADpeNSFFSVqGGEIRARGVELEAKAALSANVNVTGSYTYTDAEY--TTDTT 613
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 621 TDGKRVIGVPRFQANLGVEW---DIPgVQGLTVDGRVVYTGSSYADAANTLEVPGWTRLDAGLRY--------MTDIGGH 689
Cdd:PRK10044 614 YKGNTPAQVPKHMASLWADYtffDGP-LSGLTLGTGGRYTGSSYGDPANSFKVGSYTVVDALVKYdlarfgmaGSSVALN 692
|
730
....*....|....*....
gi 489906778 690 lvtwrarVENIANRDYWSS 708
Cdd:PRK10044 693 -------VNNLFDREYVAS 704
|
|
| TonB-hemlactrns |
TIGR01786 |
TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein; This model ... |
63-734 |
2.13e-29 |
|
TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein; This model represents a family of TonB-dependent outer membrane receptor/transporters acting on iron-containing proteins such as hemoglobin, transferrin and lactoferrin. Two subfamily models with a narrower scope are contained within this model, the heme/hemoglobin receptor family protein model (TIGR01785) and the transferrin/lactoferrin receptor family model (TIGR01776). Accessions which score above trusted to this model while not scoring above trusted to the more specific models are most likely to be hemoglobin transporters. Nearly all of the species containing trusted hits to this model have access to hemoglobin, transferrin or lactoferrin or related proteins in their biological niche. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273808 [Multi-domain] Cd Length: 715 Bit Score: 124.83 E-value: 2.13e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 63 TGAKVGILGTRDNLETPFSITAYTNELIQDRQAKGVGDVLQNDPGVRVARGFGNFQESYFIRGF-----ILSSDDIAYNG 137
Cdd:TIGR01786 6 TATRTADPQRRDLSVTPASVSVISREQLKSQQVRNLRDLLRYEPGVSVVEGGRGGSQGINIRGLdknrvAVLVDGIRQNT 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 138 LYGLLP-----RQYISTQLFERVEVLRGASAFLTGAppsgGGIGGVINLVPKRA-----PNEPL-TRFSAGYGS-DSMLE 205
Cdd:TIGR01786 86 SYGGQGstfyaINSIDPELIKSIEIVKGASSSLYGS----GALGGVVAFRTKDAadllkPGKDLgGLSKLGYSSaNNRFT 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 206 ASADIGRRFGPDDSVGI----RINAAQRGGETAIDGERTRTTVFALGLDWRGERARLSADIGyQDNRLKRA--------- 272
Cdd:TIGR01786 162 QSVAAAGRNDDVDALVQatyrRGHELKNGNKANIGNESKRSKPNPSDYKSQSFLAKLGWQLN-DAHRLGLSleytqtdyd 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 273 RPNVTLAGDAAKVPGAPDAGSnyaqPWSYSNERdvfgTLRGEYDFNDRITG---WAAYG-MRQSKEENSLAN-LNGVNGA 347
Cdd:TIGR01786 241 EPEMTNTSYLTKPLGAPLLSS----TVVLGDSK----TRDRRTGLDYELNPdnsWLDTVkLALDKQYIQLYNyLNATSAS 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 348 GQGKF---YRFDNAREDTvnTGEIGLRAKARTGPVGHELVASASYF-DLEKKNAYVMDFFNQFDTSIYDPVSYAKPAISS 423
Cdd:TIGR01786 313 DYPGVdknGRYKDKYDYY--TLGFDTNNKIEFSVHSLSLTYGLDRFkDKVSTGDSRRNLPTAAYNLYGYEGENRPVKGSN 390
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 424 TAFRGNDmddpakqgvirlasyalgdtMSFFDDKVLLTAGIR--HQRlYQRDYSYDTGIGGTPYEQSHNSPAAGLVVRVT 501
Cdd:TIGR01786 391 FGLFLQD--------------------NIKLGDWLSLSAGLRydHYK-TDPKADESKDYGAISKTYSRWSPSLGLTYKPT 449
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 502 PQVSLYANYIEALSA---------GDTAPQTANgLPVVNHgeSLAPYVSKQKEVGVKFEHDGLGGGLALFSTD------- 565
Cdd:TIGR01786 450 PWLTLYYSYSQGFRApsfdelygtGAHPGGGPY-TFLPNP--NLKPETSKNWEIGINLHFDQLDFKVSYFRNDykdfidl 526
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 566 --KPRGFVGDDQV-------FRASGKDRHRGVELTTYGELTRSVRVLGGLTWldakqlSTGNAATDGKRVIG------VP 630
Cdd:TIGR01786 527 giGVTAKGNMAQVgsntitnYVNIDNARIRGIELSGRYDLGSFFSGPDGWTT------TLKYGYTKGKDSDTnpwlnaIT 600
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 631 RFQANLGVEWDIPGvQGLTVDGRVVYTGSS-----YADAANTLEVPGWTRLDAGLRYMTDIGGHL-----VTWRARVENI 700
Cdd:TIGR01786 601 PLKVVLGLGYDHPD-EKWGVGLTLTFSGAKdavdaYATYYENGEAAKAGPLRTPSYTVVDLYGYYkpnknLTLRFGVYNL 679
|
730 740 750
....*....|....*....|....*....|....*.
gi 489906778 701 ANRDY--WSSVGGYPGNGYLVLGGPRTFTLSASMEF 734
Cdd:TIGR01786 680 LDRKYttWESARQAGPLATGYTAPGRNYKASVEYKF 715
|
|
| PRK14049 |
PRK14049 |
ferrioxamine B receptor precursor protein; Provisional |
33-682 |
5.71e-28 |
|
ferrioxamine B receptor precursor protein; Provisional
Pssm-ID: 172541 [Multi-domain] Cd Length: 726 Bit Score: 120.39 E-value: 5.71e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 33 SITLDAVRVEASADASAggLAPAFAGGQVATGAKVGIlgtrDNLETPFSITAYTNELIQDRQAKGVGDVLQNDPGVRV-A 111
Cdd:PRK14049 40 STALETLVVNGGSGGVI--TADGYVATSSATGAKVDT----PFLETPQSISSVTEQQLKDRNPQTLLETLAYTPGARVgA 113
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 112 RGFGNFQESYFIRGFilssdDIAYNGLYGLLPRQY-ISTQLF-------ERVEVLRGASAFLTGAppsgGGIGGVINLVP 183
Cdd:PRK14049 114 FGFDPRFDAFFVRGF-----DVTYTGVFRDNLRQPgASSSIFktepyglEGVSILRGPSSALYGA----SGAGGLFNLIT 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 184 KRAPNEPLTRFSAGYGSDSMLEASADIGRRFGPDDSVGIRINAAQRGGETAIDGERTRTTVFALGLDWRGErarlsadig 263
Cdd:PRK14049 185 KRPTEEPLREVQVQYGTNNRYQGQFDFSGPVNETDPVYYRLTGLLRDADTEQVGVPDDRAYIAPAFTWKPD--------- 255
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 264 yQDNRLkrarpnvTLAGDAAKVPGAPDAgSNYAQPwSYSNERDVFGtlrGEYDFNDRITGWAAYGMRQSKEENSL----- 338
Cdd:PRK14049 256 -EDTRL-------TVLGEYSRTKTGGTA-AYYNDP-LTGEVTDIFA---GNPAFNDSVQKQGRIGYEFEHRLNDTfvfrq 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 339 -ANLNGVNGAGQGKFYRFDNAREDTVNTGEIG--------------LRAKARTGPVGHELVASASYFDLEkknayvmdfF 403
Cdd:PRK14049 323 nARVSTLNIDADWAFAYAPNAADPTLLDSSAGtyderltafvidnqLEAKFDTGAFEHTLLAGVDYTKLR---------F 393
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 404 NQFDTSIYDPVSYAKPAISSTAFRGNDMDDPAKQGVIRLASYaLGDTMSFfdDKVLLTAGIRHQRLYQRDYSYDTGIGG- 482
Cdd:PRK14049 394 RALNGRGVSPPLDTKNPTQGRPVAAIDFSTRTVQDQWQLGTY-LQDQIRY--DAWTLTAGGRYDWVSTDTDTTDLATDSl 470
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 483 TPYEQSHN--SPAAGLVVRVTPQVSLYANYIEALSAgDTAPQTANGLPvvnhgesLAPYVSKQKEVGVKFE--HDGLGGG 558
Cdd:PRK14049 471 TTVSQKDKefSGRIGLTYETDFGLAPYISYSTAFSP-NAGFNRATNQP-------FKPTESEQQEVGVKYLlpNSNTLIT 542
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 559 LALFSTDKPRGFV--------GDDQVFRASGKDRHRGVELTTYGELTRSVRVLGGLTWLDAKqLSTGNAATDGKRVIGVP 630
Cdd:PRK14049 543 AALFNIDQTNGLYyevvflaaGPTNIQVQRGKLRSRGFELEANTSLDNGLSLIASYTYTDVK-IIQGPEGTIGNEVSSVP 621
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|....*
gi 489906778 631 RFQANLGVEWDIP---GVQGLTVDGRVVYTGSSYADAANTLEVPGWTRLDAGLRY 682
Cdd:PRK14049 622 NHMASAWAHYTLPeggPLYGLGLGAGARFVGSSYGNDQNTFKNSSRVLFDASVGY 676
|
|
| PRK10003 |
PRK10003 |
ferric-rhodotorulic acid outer membrane transporter; Provisional |
17-734 |
1.62e-26 |
|
ferric-rhodotorulic acid outer membrane transporter; Provisional
Pssm-ID: 236640 [Multi-domain] Cd Length: 729 Bit Score: 115.73 E-value: 1.62e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 17 AGVIQAQAAPAAGGDASITLDAVRVEASADASAGGLAPAFAGGQVATGAKVgILGTRDnleTPFSITAYTNELIQDRQAK 96
Cdd:PRK10003 21 AGCIALALLPSAAFAAPATEDTVIVEGSATAPVDDGEQDYSVKTTSAGTKM-QMTQRD---IPQSVSIVSQQRMEDQQLQ 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 97 GVGDVLQNDPGVRVARGFGNfQESYFIRGFILssDDIAYNGLYGLLPRQY------ISTQLFERVEVLRGASAFLTGApp 170
Cdd:PRK10003 97 TLGEVMENTLGISKSQADSD-RALYYSRGFQI--DNYMVDGIPTYFESRWnlgdalSDTALFERVEVVRGATGLMTGT-- 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 171 sgGGIGGVINLVPKRA-PNEPLTRFSAGYGSDSMLEASADIGRRFGPDDSVGIRINAAQRGGETAIDGERTRTTVFALGL 249
Cdd:PRK10003 172 --GNPSAAINMVRKHAtSREFKGDVSAEYGSWNKQRYVADLQSPLTEDGKVRARIVAGYQNNDSWLDRYNSEKTFFSGIV 249
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 250 DWR-GERARLSAdiGYQDNRLKRARPN----VTLAGDAAKvpGAPDAGSNYAQPWSYSNE--RDVFGTLR---------- 312
Cdd:PRK10003 250 DADlGDLTTLSA--GYEYQRIDVNSPTwgglPRWNTDGSS--NSYDRARSTAPDWAYNDKeiNKVFMTLKqrfadtwqat 325
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 313 -----GEYDFNDRITGWAAY-----GMRQSKEENSLANLNGVNGAGQGKFYRFDNAReDTVNTGEIGLRAKArtgpvgHE 382
Cdd:PRK10003 326 lnathSEVEFDSKMMYVDAYvdkatGMLVGPYSNYGPGFDYVGGTGWNSGKRKVDAL-DLFADGSYELFGRQ------HN 398
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 383 LVASASYfdLEKKNAYvmdfFNQFDTSIYDPVSyakpaiSSTAFRGNDMDDP------AKQGVIRLASYALGDTMSFfDD 456
Cdd:PRK10003 399 LMFGGSY--SKQNNRY----FSSWANIFPDEIG------SFYNFNGNFPQTDwspqslAQDDTTHMKSLYAATRVSL-AD 465
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 457 KVLLTAGIRHQrlyqrDYSYDTGIGGTpyEQSHNSPAAGLVVRVTPQVSLYANYIEALSagdtaPQTANGlpvvNHGESL 536
Cdd:PRK10003 466 PLHLILGARYT-----NWRVDTLTYSM--EKNHTTPYAGLVYDINDNWSTYASYTSIFQ-----PQNDRD----SSGKYL 529
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 537 APYVSKQKEVGVKFE--HDGLGGGLALF---------STDKPRGFVGDDQVFRASGKDRHRGVELTTYGELTRSVRVLGG 605
Cdd:PRK10003 530 APITGNNYELGLKSDwmNSRLTTTLAIFrieqdnvaqSTGTPIPGSNGETAYKAVDGTVSKGVEFELNGAITDNWQLTFG 609
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 606 LTWLDAKQlSTGNAATDGKrvigvPRFQANLGVEWDIPGVQGLTVDGRVVYTGSSYADAANTLevpGWTRLDAGLRYMTD 685
Cdd:PRK10003 610 ATRYIAED-NEGNAVNPNL-----PRTTVKLFTRYRLPVMPELTVGGGVNWQNRVYTDTVTPY---GTFRAEQGSYALVD 680
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|....
gi 489906778 686 I-GGHLVT----WRARVENIANRDYWSSVGGYpgngyLVLGGPRTFTLSASMEF 734
Cdd:PRK10003 681 LfTRYQVTknfsVQGNVNNLFDKTYDTNVEGS-----IVYGAPRNFSITATYQF 729
|
|
| BtuB |
COG4206 |
Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism]; |
72-356 |
4.80e-21 |
|
Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism];
Pssm-ID: 443355 [Multi-domain] Cd Length: 276 Bit Score: 93.78 E-value: 4.80e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 72 TRDNLETPFSITAYTNELIQDRQAKGVGDVLQNDPGVRVAR--GFGNFQeSYFIRGFilSSDDIAY--------NGLYGL 141
Cdd:COG4206 9 EQSKSDLTGSVTVIDAEELERSGATSLADALRRVPGVQVSSsgGPGSAA-SISIRGL--GSNQTLVlidgvplnDPSLGG 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 142 LPRQYISTQLFERVEVLRGASAFLTGAppsgGGIGGVINLVPKRAPNEPLTRFSAGYGSDSMLEASADIGRRFGpDDSVG 221
Cdd:COG4206 86 VDLSLIPPDDIERIEVLKGAASALYGS----DAIGGVINITTKKGKKGFKGSVSASYGSFGTRRLSASLSGGAG-KFSYS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 222 IRINAAQRGGETAIDGERTRTTVFalgldwrgERARLSADIGYQDNrlkrarPNVTLAGDAakvpGAPDAGSNYaqPWSY 301
Cdd:COG4206 161 LSASYRRSDGYRYNDPDLRNNDGY--------ENTSLNARLGYKLG------DNGSLSLSG----GYSDSERGY--PGAV 220
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 489906778 302 SNERDVFGTLRGEYDFNDRITGWAAYGMRQSKEENSLANLNGVNGAGQGKFYRFD 356
Cdd:COG4206 221 GSDRNLRLSLSLEYKLSDGWSLLLLAYYYYDRDYEDGGGDSAGTSNTDGARAGLS 275
|
|
| Plug |
pfam07715 |
TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently ... |
74-178 |
4.01e-20 |
|
TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently folding subunit of the TonB-dependent receptors. It acts as the channel gate, blocking the pore until the channel is bound by ligand. At this point it under goes conformational changes opens the channel.
Pssm-ID: 462243 [Multi-domain] Cd Length: 107 Bit Score: 86.17 E-value: 4.01e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 74 DNLETPFSITAYTNELIQDRQAKGVGDVLQNDPGVRVARGFGNFQESYFIRGFILSSDDIAYNGL------YGLLPRQYI 147
Cdd:pfam07715 1 DLRDTPGSVSVVTAEDIEDQGATNLADALRGVPGVSVSSGGGGGGSSISIRGFGSNRVLVLVDGVplnsggGGSVDLNSI 80
|
90 100 110
....*....|....*....|....*....|.
gi 489906778 148 STQLFERVEVLRGASAFLTGAppsgGGIGGV 178
Cdd:pfam07715 81 DPEDIERVEVLKGPASALYGS----GAIGGV 107
|
|
| PRK10064 |
PRK10064 |
catecholate siderophore receptor CirA; Provisional |
47-704 |
4.04e-10 |
|
catecholate siderophore receptor CirA; Provisional
Pssm-ID: 236646 [Multi-domain] Cd Length: 663 Bit Score: 62.98 E-value: 4.04e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 47 ASAGGLA-PAFAGGQVATGAKVGILGTRDNLET-PFSITAYTNELIQDRQAKGVGDVLQNDPGVRVArGFGNFQESYFIR 124
Cdd:PRK10064 14 ASAISCAwPVLAVDDDGETMVVTASAVEQNLKDaPASISVITQEDLQRKPVQNLKDVLKEVPGVQLT-NEGDNRKGVSIR 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 125 GFILSSDDIAYNG----------LYGLLPRQYISTQLFERVEVLRGASAFLTGAppsgGGIGGVINLVPKRAPNEPLTRF 194
Cdd:PRK10064 93 GLDSSYTLILIDGkrvnsrnavfRHNDFDLNWIPVDAIERIEVVRGPMSSLYGS----DALGGVVNIITKKIGQKWHGTV 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 195 SAgygsDSMLEASADIGRRF-------GPddsvgirinaaqrggetAIDGertrttvfALGLDWRGERARLSADigyqdn 267
Cdd:PRK10064 169 TV----DTTIQEHRDRGDTYngqfftsGP-----------------LIDG--------VLGMKAYGSLAKREKD------ 213
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 268 rlKRARPNVTLAGDAAKVPGAPDAGSNYAQPWSYSNERDVfgTLRGEYDFNDRITgwaaygmrQSKEENSLANLNgvnga 347
Cdd:PRK10064 214 --DPQNSTTTDTGETPRIEGFTSRDGNVEFAWTPNQNHDF--TAGYGFDRQDRDS--------DSLDKNRLERQN----- 276
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 348 gqgkFYRFDNAREDTVNTgEI---GLRAKARTGPVGHELVASASYFDleKKNAYVMDFFNQFDT--------SIYDPVSY 416
Cdd:PRK10064 277 ----YSLSHNGRWDYGNS-ELkyyGEKVENKNPGNSSPITSESNSID--GKYTLPLTAINQFLTfggewrhdKLSDAVNL 349
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 417 AKPAISSTAFRgndmddpakqgvirlaSYAL--GDTMSFFDDkVLLTAGIR--HQRLYqrdysydtgiggtpyeQSHNSP 492
Cdd:PRK10064 350 TGGTSSKTSAS----------------QYALfvEDEWRIFEP-LALTTGVRmdDHETY----------------GDHWSP 396
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 493 AAGLVVRVTPQVSLYANYIEALSA-------GDTAPQTANGLPVVNHGESLAPYVSKQKEVGVKFEH-----DGLGGGLA 560
Cdd:PRK10064 397 RAYLVYNATDTVTVKGGWATAFKApsllqlsPDWTSNSCRGACKIVGSPDLKPETSESWELGLYYMGeegwlEGVESSVT 476
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 561 LFSTD-------------------------KPRGFVGDDQVFRASG--KDRHRGVELTTYGELTRSVRVLGGLTWLDAKQ 613
Cdd:PRK10064 477 VFRNDvddrisisrtsdvnaapgyqnfvgfETNGRGRRVPVFRYYNvnKARIQGVETELKIPFNDEWKLSLNYTYNDGRD 556
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 614 LSTGnaatDGKRVIGVPRFQANLGVEWDIPGVQGLTVDGRVVYTGSSYADAANTLEVPGWTRLDAGLRYMTDiggHLVTW 693
Cdd:PRK10064 557 VSNG----ENKPLSDLPFHTANGTLDWKPLALEDWSFYVSGNYTGQKRADSATAKTPGGYTIWNTGAAWQVT---KDVKL 629
|
730
....*....|.
gi 489906778 694 RARVENIANRD 704
Cdd:PRK10064 630 RAGVLNLGDKD 640
|
|
| btuB |
PRK10641 |
TonB-dependent vitamin B12 receptor BtuB; |
82-217 |
2.03e-07 |
|
TonB-dependent vitamin B12 receptor BtuB;
Pssm-ID: 236730 [Multi-domain] Cd Length: 614 Bit Score: 54.23 E-value: 2.03e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 82 ITAYTNELIQDRQAKGVGDVLQNDPGVRVARGFGNFQ-ESYFIRG------FILsSDDIAYN--GLYGLLPRQYISTQLF 152
Cdd:PRK10641 46 TTVVTRDDIDRWQSKSVNDVLRRLPGVDIAQNGGLGQlSSLFIRGtnsshvLVL-IDGVRLNqaGISGSADLSQIPISLV 124
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 489906778 153 ERVEVLRGASAFLTGAppsgGGIGGVINLVPKRapNEPLTRFSAGYGSDSMLEASADIGRRFGPD 217
Cdd:PRK10641 125 QRIEYIRGPRSAVYGS----DAIGGVVNIITTR--DKPGTTLSAGWGSNGYQNYDGSTQQQLGDN 183
|
|
| PRK13484 |
PRK13484 |
IreA family TonB-dependent siderophore receptor; |
72-683 |
2.62e-07 |
|
IreA family TonB-dependent siderophore receptor;
Pssm-ID: 139605 [Multi-domain] Cd Length: 682 Bit Score: 54.24 E-value: 2.62e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 72 TRDNLETPFSITAYTNELIQDRQAKGVGDVLQNDPGVRVARGfgNFQESYFIRGF------IL------SSDDIAYNGLY 139
Cdd:PRK13484 41 TQQLRNAPASVSVITSEQLQKKPVSDLVDAVKDVEGISITGG--NEKPDISIRGLsgdytlILvdgrrqSGRESRPNGSG 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 140 GLLPRQYISTQLFERVEVLRGASAFLTGAppsgGGIGGVINLVPKRAPNEPltrFSAGYGSDSMLEASADIGRRF----- 214
Cdd:PRK13484 119 GFEAGFIPPVEAIERIEVIRGPMSSLYGS----DAIGGVINIITKPVNNQT---WDGVLGLGGIIQEHGKFGNSTtndfy 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 215 --GP--DDSVGIRINAaqrggetaidgertrttvfalGLDWRGERaRLSADIGYQDNRlkrarpNVTlagdaAKVPGAP- 289
Cdd:PRK13484 192 lsGPliKDKLGLQLYG---------------------GMNYRKED-SISQGTPAKDNK------NIT-----ATLQFTPt 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 290 -------DAGSNYAQPWSYSNERDVFGTLRGEY--------DFNDR---ITGWAAYG----------MRQSKEENSLANL 341
Cdd:PRK13484 239 esqkfvfEYGKNNQVHTLTPGESLDAWTMRGNLkqpnskreTHNSRshwVAAWNAQGeilhpeiavyQEKVIREVKSGKK 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 342 NGVNGAGqgkfYRFDNAREDTVNTgeiglrakartgpvghelVASASYFDLEKKNayVMDFFNQFD-TSIYDPVSYAKPA 420
Cdd:PRK13484 319 DKYNHWD----LNYESRKPEITNT------------------IIDAKVTAFLPEN--VLTIGGQFQhAELRDDSATGKKT 374
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 421 ISSTAFRgndmddpAKQGVIRLAS-YALGDTMSffddkvlLTAGIRhqrlyqrdysydtgIGGTPYEQSHNSPAAGLVVR 499
Cdd:PRK13484 375 TETQSVS-------IKQKAVFIENeYAATDSLA-------LTGGLR--------------LDNHEIYGSYWNPRLYAVYN 426
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 500 VTPQVSL---YANYIEALSAGDTAPQ----TANGLPVVNHGESLAPYVSKQKEVGVKFEH-DGLGGGLALFSTDKPRGFV 571
Cdd:PRK13484 427 LTDNLTLkggIAKAFRAPSIREVSPGfgtlTQGGASIMYGNRDLKPETSVTEEIGIIYSNdSGFSASATLFNTDFKNKLT 506
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489906778 572 GDDQ------------VFRASGKDRHRGVELTTYGELTRSVRVLGGLTWLDAKQLSTgNAATDGKRVIG-----VPRFQA 634
Cdd:PRK13484 507 SYDIgtkdpvtglntfIYDNVGEANIRGVELATQIPVYDKWHVSANYTFTDSRRKSD-DESLNGKSLKGeplerTPRHAA 585
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|....
gi 489906778 635 NLGVEWDIpgVQGLTVDGRVVYTGSS-YADAANTLEVP----GWTRLDAGLRYM 683
Cdd:PRK13484 586 NAKLEWDY--TQDITFYSSLNYTGKQiWAAQRNGAKVPrvrnGFTSMDIGLNYQ 637
|
|
| |
