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Conserved domains on  [gi|489910273|ref|WP_003813687|]
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MULTISPECIES: TadE/TadG family type IV pilus assembly protein [Bordetella]

Protein Classification

TadE/TadG family type IV pilus assembly protein( domain architecture ID 11471839)

TadE/TadG family type IV pilus assembly protein such as TadE/TadG that may act to assemble or export Flp pilus in various bacteria

Gene Ontology:  GO:0009297

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
TadG COG4961
Flp pilus assembly protein TadG, includes N-terminal TadE domain [Intracellular trafficking, ...
 14-63 2.88e-03

Flp pilus assembly protein TadG, includes N-terminal TadE domain [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures];


:

Pssm-ID: 443987 [Multi-domain]  Cd Length: 152  Bit Score: 37.09  E-value: 2.88e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|
gi 489910273  14 GTAALEFMLAGMLLLAASIATVETMYWHQMRHLAYLALIEAARAGATSHG 63
Cdd:COG4961   19 GAAAVEFALVLPVLLLLLGGIIEFGRAFYARSKLQNAADAAARAAARGQA 68
 
Name Accession Description Interval E-value
TadG COG4961
Flp pilus assembly protein TadG, includes N-terminal TadE domain [Intracellular trafficking, ...
 14-63 2.88e-03

Flp pilus assembly protein TadG, includes N-terminal TadE domain [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures];


Pssm-ID: 443987 [Multi-domain]  Cd Length: 152  Bit Score: 37.09  E-value: 2.88e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|
gi 489910273  14 GTAALEFMLAGMLLLAASIATVETMYWHQMRHLAYLALIEAARAGATSHG 63
Cdd:COG4961   19 GAAAVEFALVLPVLLLLLGGIIEFGRAFYARSKLQNAADAAARAAARGQA 68
 
Name Accession Description Interval E-value
TadG COG4961
Flp pilus assembly protein TadG, includes N-terminal TadE domain [Intracellular trafficking, ...
 14-63 2.88e-03

Flp pilus assembly protein TadG, includes N-terminal TadE domain [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures];


Pssm-ID: 443987 [Multi-domain]  Cd Length: 152  Bit Score: 37.09  E-value: 2.88e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|
gi 489910273  14 GTAALEFMLAGMLLLAASIATVETMYWHQMRHLAYLALIEAARAGATSHG 63
Cdd:COG4961   19 GAAAVEFALVLPVLLLLLGGIIEFGRAFYARSKLQNAADAAARAAARGQA 68
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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