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Conserved domains on  [gi|489925453|ref|WP_003828793|]
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MULTISPECIES: N-acetylneuraminate lyase [Citrobacter]

Protein Classification

N-acetylneuraminate lyase( domain architecture ID 10012145)

N-acetylneuraminate lyase (NAL) catalyzes the reversible aldol reaction of N-acetyl-D-mannosamine and pyruvate to give N-acetyl-D-neuraminic acid (D-sialic acid)

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PRK04147 PRK04147
N-acetylneuraminate lyase; Provisional
2-295 0e+00

N-acetylneuraminate lyase; Provisional


:

Pssm-ID: 179749 [Multi-domain]  Cd Length: 293  Bit Score: 517.62  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925453   2 ARDLKGVMPALLTPFDNQQRLDIESLRRLVRFNIG-QGVDGLYVGGSTGEAFVQNRVEREQVLEIVAEEAKGKVTLIAHV 80
Cdd:PRK04147   1 AKNLKGVYAALLTPFDEDGQIDEQGLRRLVRFNIEkQGIDGLYVGGSTGEAFLLSTEEKKQVLEIVAEEAKGKVKLIAQV 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925453  81 GTVSTEESQQLASAAHRYGFDAVSAVTPFYYPFSFEEHCDHYRAIIDSADGlPMVVYNIPALSGVKLTLDQINTLVTLPG 160
Cdd:PRK04147  81 GSVNTAEAQELAKYATELGYDAISAVTPFYYPFSFEEICDYYREIIDSADN-PMIVYNIPALTGVNLSLDQFNELFTLPK 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925453 161 VGALKQTSGDLYQMEQIRRAHPDLVLYNGYDEIFASGLLAGADGGIGSTYNIMGWRYQGIVKALKEGDIRTAQKLQTECN 240
Cdd:PRK04147 160 VIGVKQTAGDLYQLERIRKAFPDKLIYNGFDEMFASGLLAGADGAIGSTYNVNGWRARQIFEAAKAGDIQEAQELQHECN 239
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 489925453 241 KVIDLLIKVGVFRGLKTVLHYMDvVSVPLCRKPFAPVDEHYLPELKALANQLLAE 295
Cdd:PRK04147 240 DVIDLLIKNGVYPGLKEILHYMG-VDAGLCRKPFKPVDEKYLPALKALAAKYLKE 293
 
Name Accession Description Interval E-value
PRK04147 PRK04147
N-acetylneuraminate lyase; Provisional
2-295 0e+00

N-acetylneuraminate lyase; Provisional


Pssm-ID: 179749 [Multi-domain]  Cd Length: 293  Bit Score: 517.62  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925453   2 ARDLKGVMPALLTPFDNQQRLDIESLRRLVRFNIG-QGVDGLYVGGSTGEAFVQNRVEREQVLEIVAEEAKGKVTLIAHV 80
Cdd:PRK04147   1 AKNLKGVYAALLTPFDEDGQIDEQGLRRLVRFNIEkQGIDGLYVGGSTGEAFLLSTEEKKQVLEIVAEEAKGKVKLIAQV 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925453  81 GTVSTEESQQLASAAHRYGFDAVSAVTPFYYPFSFEEHCDHYRAIIDSADGlPMVVYNIPALSGVKLTLDQINTLVTLPG 160
Cdd:PRK04147  81 GSVNTAEAQELAKYATELGYDAISAVTPFYYPFSFEEICDYYREIIDSADN-PMIVYNIPALTGVNLSLDQFNELFTLPK 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925453 161 VGALKQTSGDLYQMEQIRRAHPDLVLYNGYDEIFASGLLAGADGGIGSTYNIMGWRYQGIVKALKEGDIRTAQKLQTECN 240
Cdd:PRK04147 160 VIGVKQTAGDLYQLERIRKAFPDKLIYNGFDEMFASGLLAGADGAIGSTYNVNGWRARQIFEAAKAGDIQEAQELQHECN 239
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 489925453 241 KVIDLLIKVGVFRGLKTVLHYMDvVSVPLCRKPFAPVDEHYLPELKALANQLLAE 295
Cdd:PRK04147 240 DVIDLLIKNGVYPGLKEILHYMG-VDAGLCRKPFKPVDEKYLPALKALAAKYLKE 293
nanA TIGR00683
N-acetylneuraminate lyase; N-acetylneuraminate lyase is also known as N-acetylneuraminic acid ...
5-296 1.13e-178

N-acetylneuraminate lyase; N-acetylneuraminate lyase is also known as N-acetylneuraminic acid aldolase, sialic acid aldolase, or sialate lyase. It is an intracellular enzyme. The structure of this homotetrameric enzyme related to dihydrodipicolinate synthase is known. In Clostridium tertium, the enzyme appears to be in an operon with a secreted sialidase that releases sialic acid from host sialoglycoconjugates. In several E. coli strains, however, this enzyme is responsible for N-acetyl-D-neuraminic acid synthesis for capsule production by condensing N-acetyl-D-mannosamine and pyruvate. [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides, Central intermediary metabolism, Amino sugars]


Pssm-ID: 273217  Cd Length: 293  Bit Score: 494.47  E-value: 1.13e-178
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925453    5 LKGVMPALLTPFDNQQRLDIESLRRLVRFNIGQGVDGLYVGGSTGEAFVQNRVEREQVLEIVAEEAKGKVTLIAHVGTVS 84
Cdd:TIGR00683   1 LRGVMAALLTPFDQQQALDKASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHVGCVN 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925453   85 TEESQQLASAAHRYGFDAVSAVTPFYYPFSFEEHCDHYRAIIDSADGLPMVVYNIPALSGVKLTLDQINTLVTLPGVGAL 164
Cdd:TIGR00683  81 TAESQQLAASAKRYGFDAVSAVTPFYYPFSFEEHCDHYRAIIDSADGLPMVVYNIPALSGVKLTLDQINTLVTLPGVGAL 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925453  165 KQTSGDLYQMEQIRRAHPDLVLYNGYDEIFASGLLAGADGGIGSTYNIMGWRYQGIVKALKEGDIRTAQKLQTECNKVID 244
Cdd:TIGR00683 161 KQTSGDLYQMEQIRREHPDLVLYNGYDEIFASGLLAGADGGIGSTYNIMGWRYQGIVKALKEGDIQTAQKLQTECNKVID 240
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|..
gi 489925453  245 LLIKVGVFRGLKTVLHYMDVVSVPLCRKPFAPVDEHYLPELKALANQLLAEK 296
Cdd:TIGR00683 241 LLIKTGVFRGLKTVLHYMDVVSVPLCRKPFGPVDEKYLPELKALAQQLMQER 292
NAL cd00954
N-Acetylneuraminic acid aldolase, also called N-acetylneuraminate lyase (NAL); ...
5-291 1.43e-143

N-Acetylneuraminic acid aldolase, also called N-acetylneuraminate lyase (NAL); N-Acetylneuraminic acid aldolase, also called N-acetylneuraminate lyase (NAL), which catalyses the reversible aldol reaction of N-acetyl-D-mannosamine and pyruvate to give N-acetyl-D-neuraminic acid (D-sialic acid). It has a widespread application as biocatalyst for the synthesis of sialic acid and its derivatives. This enzyme has been shown to be quite specific for pyruvate as the donor, but flexible to a variety of D- and, to some extent, L-hexoses and pentoses as acceptor substrates. NAL is member of dihydrodipicolinate synthase family that comprises several pyruvate-dependent class I aldolases.


Pssm-ID: 188641 [Multi-domain]  Cd Length: 288  Bit Score: 405.15  E-value: 1.43e-143
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925453   5 LKGVMPALLTPFDNQQRLDIESLRRLVRFNIG-QGVDGLYVGGSTGEAFVQNRVEREQVLEIVAEEAKGKVTLIAHVGTV 83
Cdd:cd00954    1 LKGLIAALLTPFDENGEINEDVLRAIVDYLIEkQGVDGLYVNGSTGEGFLLSVEERKQIAEIVAEAAKGKVTLIAHVGSL 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925453  84 STEESQQLASAAHRYGFDAVSAVTPFYYPFSFEEHCDHYRAIIDSADGLPMVVYNIPALSGVKLTLDQINTLVTLPGVGA 163
Cdd:cd00954   81 NLKESQELAKHAEELGYDAISAITPFYYKFSFEEIKDYYREIIAAAASLPMIIYHIPALTGVNLTLEQFLELFEIPNVIG 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925453 164 LKQTSGDLYQMEQIRRAHP-DLVLYNGYDEIFASGLLAGADGGIGSTYNIMGWRYQGIVKALKEGDIRTAQKLQTECNKV 242
Cdd:cd00954  161 VKFTATDLYDLERIRAASPeDKLVLNGFDEMLLSALALGADGAIGSTYNVNGKRYRKIFEAFNAGDIDTARELQHVINDV 240
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*....
gi 489925453 243 IDLLIKVGVFRGLKTVLHYMDvVSVPLCRKPFAPVDEHYLPELKALANQ 291
Cdd:cd00954  241 ITVLIKNGLYPTLKAILRLMG-LDAGPCRLPLRKVTEKALAKAKELAAK 288
DHDPS pfam00701
Dihydrodipicolinate synthetase family; This family has a TIM barrel structure.
4-292 3.69e-138

Dihydrodipicolinate synthetase family; This family has a TIM barrel structure.


Pssm-ID: 395570 [Multi-domain]  Cd Length: 289  Bit Score: 391.73  E-value: 3.69e-138
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925453    4 DLKGVMPALLTPFDNQQRLDIESLRRLVRFNIGQGVDGLYVGGSTGEAFVQNRVEREQVLEIVAEEAKGKVTLIAHVGTV 83
Cdd:pfam00701   1 KFSGIITALVTPFDTDGTLDFAALRQLIDFLINKGVDGLVVGGTTGESFTLSTEEREQLVEITVNEAKGRIPVIAGVGSN 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925453   84 STEESQQLASAAHRYGFDAVSAVTPFYYPFSFEEHCDHYRAIIdSADGLPMVVYNIPALSGVKLTLDQINTLVTLPGVGA 163
Cdd:pfam00701  81 STSEAIHLAQLAEEYGADGALAVTPYYNKPSQEGLYQHFKAIA-EATDLPMILYNVPSRTGVDLTPETVGRLATNPNIVG 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925453  164 LKQTSGDLYQMEQIRR-AHPDLVLYNGYDEIFASGLLAGADGGIGSTYNIMGWRYQGIVKALKEGDIRTAQKLQTECNKV 242
Cdd:pfam00701 160 IKEASGDLDRMINIKKeAGPDFVILSGDDETMLPALSLGADGVISVTSNIAGHRMRQMYKALKNGDLATAALINHKLLPL 239
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|
gi 489925453  243 IDLLIKVGVFRGLKTVLHYMDVVSVPLCRKPFAPVDEHYLPELKALANQL 292
Cdd:pfam00701 240 IKILFAEPNPIPIKTALELLGLVVGPTCRLPLTPLSEEERPELEAILKAA 289
DapA COG0329
4-hydroxy-tetrahydrodipicolinate synthase/N-acetylneuraminate lyase [Amino acid transport and ...
4-292 4.37e-97

4-hydroxy-tetrahydrodipicolinate synthase/N-acetylneuraminate lyase [Amino acid transport and metabolism, Cell wall/membrane/envelope biogenesis]; 4-hydroxy-tetrahydrodipicolinate synthase/N-acetylneuraminate lyase is part of the Pathway/BioSystem: Lysine biosynthesis


Pssm-ID: 440098 [Multi-domain]  Cd Length: 291  Bit Score: 287.43  E-value: 4.37e-97
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925453   4 DLKGVMPALLTPFDNQQRLDIESLRRLVRFNIGQGVDGLYVGGSTGEAFVQNRVEREQVLEIVAEEAKGKVTLIAHVGTV 83
Cdd:COG0329    1 KFRGVIPALVTPFDADGSVDEEALRRLVEFLIDAGVDGLVVLGTTGESATLTDEERKRVLEAVVEAAAGRVPVIAGVGSN 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925453  84 STEESQQLASAAHRYGFDAVSAVTPFYYPFSFEEHCDHYRAIIDSADgLPMVVYNIPALSGVKLTLDQINTLVTLPGVGA 163
Cdd:COG0329   81 STAEAIELARHAEEAGADAVLVVPPYYNKPTQEGLYAHFKAIAEAVD-LPIILYNIPGRTGVDLSPETLARLAEIPNIVG 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925453 164 LKQTSGDLYQMEQIRRAHP-DLVLYNGYDEIFASGLLAGADGGIGSTYNIMGWRYQGIVKALKEGDIRTAQKLQTECNKV 242
Cdd:COG0329  160 IKEASGDLDRIAELIRATGdDFAVLSGDDALALPALALGADGVISVTANVAPELMVALYEAALAGDLAEARALQDRLLPL 239
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|
gi 489925453 243 IDLLIKVGVFRGLKTVLHYMDVVSvPLCRKPFAPVDEHYLPELKALANQL 292
Cdd:COG0329  240 IRALFAEGNPAPVKAALALLGLPS-GPVRLPLLPLSEEERAELRAALKEL 288
 
Name Accession Description Interval E-value
PRK04147 PRK04147
N-acetylneuraminate lyase; Provisional
2-295 0e+00

N-acetylneuraminate lyase; Provisional


Pssm-ID: 179749 [Multi-domain]  Cd Length: 293  Bit Score: 517.62  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925453   2 ARDLKGVMPALLTPFDNQQRLDIESLRRLVRFNIG-QGVDGLYVGGSTGEAFVQNRVEREQVLEIVAEEAKGKVTLIAHV 80
Cdd:PRK04147   1 AKNLKGVYAALLTPFDEDGQIDEQGLRRLVRFNIEkQGIDGLYVGGSTGEAFLLSTEEKKQVLEIVAEEAKGKVKLIAQV 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925453  81 GTVSTEESQQLASAAHRYGFDAVSAVTPFYYPFSFEEHCDHYRAIIDSADGlPMVVYNIPALSGVKLTLDQINTLVTLPG 160
Cdd:PRK04147  81 GSVNTAEAQELAKYATELGYDAISAVTPFYYPFSFEEICDYYREIIDSADN-PMIVYNIPALTGVNLSLDQFNELFTLPK 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925453 161 VGALKQTSGDLYQMEQIRRAHPDLVLYNGYDEIFASGLLAGADGGIGSTYNIMGWRYQGIVKALKEGDIRTAQKLQTECN 240
Cdd:PRK04147 160 VIGVKQTAGDLYQLERIRKAFPDKLIYNGFDEMFASGLLAGADGAIGSTYNVNGWRARQIFEAAKAGDIQEAQELQHECN 239
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 489925453 241 KVIDLLIKVGVFRGLKTVLHYMDvVSVPLCRKPFAPVDEHYLPELKALANQLLAE 295
Cdd:PRK04147 240 DVIDLLIKNGVYPGLKEILHYMG-VDAGLCRKPFKPVDEKYLPALKALAAKYLKE 293
nanA TIGR00683
N-acetylneuraminate lyase; N-acetylneuraminate lyase is also known as N-acetylneuraminic acid ...
5-296 1.13e-178

N-acetylneuraminate lyase; N-acetylneuraminate lyase is also known as N-acetylneuraminic acid aldolase, sialic acid aldolase, or sialate lyase. It is an intracellular enzyme. The structure of this homotetrameric enzyme related to dihydrodipicolinate synthase is known. In Clostridium tertium, the enzyme appears to be in an operon with a secreted sialidase that releases sialic acid from host sialoglycoconjugates. In several E. coli strains, however, this enzyme is responsible for N-acetyl-D-neuraminic acid synthesis for capsule production by condensing N-acetyl-D-mannosamine and pyruvate. [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides, Central intermediary metabolism, Amino sugars]


Pssm-ID: 273217  Cd Length: 293  Bit Score: 494.47  E-value: 1.13e-178
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925453    5 LKGVMPALLTPFDNQQRLDIESLRRLVRFNIGQGVDGLYVGGSTGEAFVQNRVEREQVLEIVAEEAKGKVTLIAHVGTVS 84
Cdd:TIGR00683   1 LRGVMAALLTPFDQQQALDKASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHVGCVN 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925453   85 TEESQQLASAAHRYGFDAVSAVTPFYYPFSFEEHCDHYRAIIDSADGLPMVVYNIPALSGVKLTLDQINTLVTLPGVGAL 164
Cdd:TIGR00683  81 TAESQQLAASAKRYGFDAVSAVTPFYYPFSFEEHCDHYRAIIDSADGLPMVVYNIPALSGVKLTLDQINTLVTLPGVGAL 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925453  165 KQTSGDLYQMEQIRRAHPDLVLYNGYDEIFASGLLAGADGGIGSTYNIMGWRYQGIVKALKEGDIRTAQKLQTECNKVID 244
Cdd:TIGR00683 161 KQTSGDLYQMEQIRREHPDLVLYNGYDEIFASGLLAGADGGIGSTYNIMGWRYQGIVKALKEGDIQTAQKLQTECNKVID 240
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|..
gi 489925453  245 LLIKVGVFRGLKTVLHYMDVVSVPLCRKPFAPVDEHYLPELKALANQLLAEK 296
Cdd:TIGR00683 241 LLIKTGVFRGLKTVLHYMDVVSVPLCRKPFGPVDEKYLPELKALAQQLMQER 292
NAL cd00954
N-Acetylneuraminic acid aldolase, also called N-acetylneuraminate lyase (NAL); ...
5-291 1.43e-143

N-Acetylneuraminic acid aldolase, also called N-acetylneuraminate lyase (NAL); N-Acetylneuraminic acid aldolase, also called N-acetylneuraminate lyase (NAL), which catalyses the reversible aldol reaction of N-acetyl-D-mannosamine and pyruvate to give N-acetyl-D-neuraminic acid (D-sialic acid). It has a widespread application as biocatalyst for the synthesis of sialic acid and its derivatives. This enzyme has been shown to be quite specific for pyruvate as the donor, but flexible to a variety of D- and, to some extent, L-hexoses and pentoses as acceptor substrates. NAL is member of dihydrodipicolinate synthase family that comprises several pyruvate-dependent class I aldolases.


Pssm-ID: 188641 [Multi-domain]  Cd Length: 288  Bit Score: 405.15  E-value: 1.43e-143
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925453   5 LKGVMPALLTPFDNQQRLDIESLRRLVRFNIG-QGVDGLYVGGSTGEAFVQNRVEREQVLEIVAEEAKGKVTLIAHVGTV 83
Cdd:cd00954    1 LKGLIAALLTPFDENGEINEDVLRAIVDYLIEkQGVDGLYVNGSTGEGFLLSVEERKQIAEIVAEAAKGKVTLIAHVGSL 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925453  84 STEESQQLASAAHRYGFDAVSAVTPFYYPFSFEEHCDHYRAIIDSADGLPMVVYNIPALSGVKLTLDQINTLVTLPGVGA 163
Cdd:cd00954   81 NLKESQELAKHAEELGYDAISAITPFYYKFSFEEIKDYYREIIAAAASLPMIIYHIPALTGVNLTLEQFLELFEIPNVIG 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925453 164 LKQTSGDLYQMEQIRRAHP-DLVLYNGYDEIFASGLLAGADGGIGSTYNIMGWRYQGIVKALKEGDIRTAQKLQTECNKV 242
Cdd:cd00954  161 VKFTATDLYDLERIRAASPeDKLVLNGFDEMLLSALALGADGAIGSTYNVNGKRYRKIFEAFNAGDIDTARELQHVINDV 240
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*....
gi 489925453 243 IDLLIKVGVFRGLKTVLHYMDvVSVPLCRKPFAPVDEHYLPELKALANQ 291
Cdd:cd00954  241 ITVLIKNGLYPTLKAILRLMG-LDAGPCRLPLRKVTEKALAKAKELAAK 288
DHDPS pfam00701
Dihydrodipicolinate synthetase family; This family has a TIM barrel structure.
4-292 3.69e-138

Dihydrodipicolinate synthetase family; This family has a TIM barrel structure.


Pssm-ID: 395570 [Multi-domain]  Cd Length: 289  Bit Score: 391.73  E-value: 3.69e-138
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925453    4 DLKGVMPALLTPFDNQQRLDIESLRRLVRFNIGQGVDGLYVGGSTGEAFVQNRVEREQVLEIVAEEAKGKVTLIAHVGTV 83
Cdd:pfam00701   1 KFSGIITALVTPFDTDGTLDFAALRQLIDFLINKGVDGLVVGGTTGESFTLSTEEREQLVEITVNEAKGRIPVIAGVGSN 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925453   84 STEESQQLASAAHRYGFDAVSAVTPFYYPFSFEEHCDHYRAIIdSADGLPMVVYNIPALSGVKLTLDQINTLVTLPGVGA 163
Cdd:pfam00701  81 STSEAIHLAQLAEEYGADGALAVTPYYNKPSQEGLYQHFKAIA-EATDLPMILYNVPSRTGVDLTPETVGRLATNPNIVG 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925453  164 LKQTSGDLYQMEQIRR-AHPDLVLYNGYDEIFASGLLAGADGGIGSTYNIMGWRYQGIVKALKEGDIRTAQKLQTECNKV 242
Cdd:pfam00701 160 IKEASGDLDRMINIKKeAGPDFVILSGDDETMLPALSLGADGVISVTSNIAGHRMRQMYKALKNGDLATAALINHKLLPL 239
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|
gi 489925453  243 IDLLIKVGVFRGLKTVLHYMDVVSVPLCRKPFAPVDEHYLPELKALANQL 292
Cdd:pfam00701 240 IKILFAEPNPIPIKTALELLGLVVGPTCRLPLTPLSEEERPELEAILKAA 289
DapA COG0329
4-hydroxy-tetrahydrodipicolinate synthase/N-acetylneuraminate lyase [Amino acid transport and ...
4-292 4.37e-97

4-hydroxy-tetrahydrodipicolinate synthase/N-acetylneuraminate lyase [Amino acid transport and metabolism, Cell wall/membrane/envelope biogenesis]; 4-hydroxy-tetrahydrodipicolinate synthase/N-acetylneuraminate lyase is part of the Pathway/BioSystem: Lysine biosynthesis


Pssm-ID: 440098 [Multi-domain]  Cd Length: 291  Bit Score: 287.43  E-value: 4.37e-97
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925453   4 DLKGVMPALLTPFDNQQRLDIESLRRLVRFNIGQGVDGLYVGGSTGEAFVQNRVEREQVLEIVAEEAKGKVTLIAHVGTV 83
Cdd:COG0329    1 KFRGVIPALVTPFDADGSVDEEALRRLVEFLIDAGVDGLVVLGTTGESATLTDEERKRVLEAVVEAAAGRVPVIAGVGSN 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925453  84 STEESQQLASAAHRYGFDAVSAVTPFYYPFSFEEHCDHYRAIIDSADgLPMVVYNIPALSGVKLTLDQINTLVTLPGVGA 163
Cdd:COG0329   81 STAEAIELARHAEEAGADAVLVVPPYYNKPTQEGLYAHFKAIAEAVD-LPIILYNIPGRTGVDLSPETLARLAEIPNIVG 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925453 164 LKQTSGDLYQMEQIRRAHP-DLVLYNGYDEIFASGLLAGADGGIGSTYNIMGWRYQGIVKALKEGDIRTAQKLQTECNKV 242
Cdd:COG0329  160 IKEASGDLDRIAELIRATGdDFAVLSGDDALALPALALGADGVISVTANVAPELMVALYEAALAGDLAEARALQDRLLPL 239
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|
gi 489925453 243 IDLLIKVGVFRGLKTVLHYMDVVSvPLCRKPFAPVDEHYLPELKALANQL 292
Cdd:COG0329  240 IRALFAEGNPAPVKAALALLGLPS-GPVRLPLLPLSEEERAELRAALKEL 288
DHDPS-like cd00408
Dihydrodipicolinate synthase family; Dihydrodipicolinate synthase family. A member of the ...
8-288 9.41e-91

Dihydrodipicolinate synthase family; Dihydrodipicolinate synthase family. A member of the class I aldolases, which use an active-site lysine which stabilizes a reaction intermediate via Schiff base formation, and have TIM beta/alpha barrel fold. The dihydrodipicolinate synthase family comprises several pyruvate-dependent class I aldolases that use the same catalytic step to catalyze different reactions in different pathways and includes such proteins as N-acetylneuraminate lyase, MosA protein, 5-keto-4-deoxy-glucarate dehydratase, trans-o-hydroxybenzylidenepyruvate hydratase-aldolase, trans-2'-carboxybenzalpyruvate hydratase-aldolase, and 2-keto-3-deoxy- gluconate aldolase. The family is also referred to as the N-acetylneuraminate lyase (NAL) family.


Pssm-ID: 188630 [Multi-domain]  Cd Length: 281  Bit Score: 270.96  E-value: 9.41e-91
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925453   8 VMPALLTPFDNQQRLDIESLRRLVRFNIGQGVDGLYVGGSTGEAFVQNRVEREQVLEIVAEEAKGKVTLIAHVGTVSTEE 87
Cdd:cd00408    1 VIPALVTPFTADGEVDLDALRRLVEFLIEAGVDGLVVLGTTGEAPTLTDEERKEVIEAVVEAVAGRVPVIAGVGANSTRE 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925453  88 SQQLASAAHRYGFDAVSAVTPFYYPFSFEEHCDHYRAIIDSADgLPMVVYNIPALSGVKLTLDQINTLVTLPGVGALKQT 167
Cdd:cd00408   81 AIELARHAEEAGADGVLVVPPYYNKPSQEGIVAHFKAVADASD-LPVILYNIPGRTGVDLSPETIARLAEHPNIVGIKDS 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925453 168 SGDLYQMEQIRRA-HPDLVLYNGYDEIFASGLLAGADGGIGSTYNIMGWRYQGIVKALKEGDIRTAQKLQTECNKVIDLL 246
Cdd:cd00408  160 SGDLDRLTRLIALlGPDFAVLSGDDDLLLPALALGADGAISGAANVAPKLAVALYEAARAGDLEEARALQDRLLPLIEAL 239
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|..
gi 489925453 247 IKVGVFRGLKTVLHYMDVVSVPlCRKPFAPVDEHYLPELKAL 288
Cdd:cd00408  240 FKEGNPAPVKAALALLGLDAGP-VRLPLVPLSEEERAKLEAL 280
DHDPS cd00950
Dihydrodipicolinate synthase (DHDPS); Dihydrodipicolinate synthase (DHDPS) is a key enzyme in ...
5-288 2.00e-62

Dihydrodipicolinate synthase (DHDPS); Dihydrodipicolinate synthase (DHDPS) is a key enzyme in lysine biosynthesis. It catalyzes the aldol condensation of L-aspartate-beta- semialdehyde and pyruvate to dihydropicolinic acid via a Schiff base formation between pyruvate and a lysine residue. The functional enzyme is a homotetramer consisting of a dimer of dimers. DHDPS is member of dihydrodipicolinate synthase family that comprises several pyruvate-dependent class I aldolases that use the same catalytic step to catalyze different reactions in different pathways.


Pssm-ID: 188637 [Multi-domain]  Cd Length: 284  Bit Score: 198.87  E-value: 2.00e-62
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925453   5 LKGVMPALLTPFDNQQRLDIESLRRLVRFNIGQGVDGLYVGGSTGEAFVQNRVEREQVLEIVAEEAKGKVTLIAHVGTVS 84
Cdd:cd00950    1 FGGSITALVTPFKDDGSVDFDALERLIEFQIENGTDGLVVCGTTGESPTLSDEEHEAVIEAVVEAVNGRVPVIAGTGSNN 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925453  85 TEESQQLASAAHRYGFDAVSAVTPFYYPFSFEEHCDHYRAIIDSADgLPMVVYNIPALSGVKLTLDQINTLVTLPGVGAL 164
Cdd:cd00950   81 TAEAIELTKRAEKAGADAALVVTPYYNKPSQEGLYAHFKAIAEATD-LPVILYNVPGRTGVNIEPETVLRLAEHPNIVGI 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925453 165 KQTSGDLYQMEQIR-RAHPDLVLYNGYDEIFASGLLAGADGGIGSTYNIMGWRYQGIVKALKEGDIRTAQKLQTECNKVI 243
Cdd:cd00950  160 KEATGDLDRVSELIaLCPDDFAVLSGDDALTLPFLALGGVGVISVAANVAPKLMAEMVRAALAGDLEKARELHRKLLPLI 239
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|
gi 489925453 244 DLLikvgvFR-----GLKTVLHYMDVVSvPLCRKPFAPVDEHYLPELKAL 288
Cdd:cd00950  240 KAL-----FAepnpiPVKAALALLGLIS-GELRLPLVPLSEELRAKLRAA 283
dapA TIGR00674
4-hydroxy-tetrahydrodipicolinate synthase; Members of this family are ...
7-292 5.65e-45

4-hydroxy-tetrahydrodipicolinate synthase; Members of this family are 4-hydroxy-tetrahydrodipicolinate synthase, previously (incorrectly) called dihydrodipicolinate synthase. It is a homotetrameric enzyme of lysine biosynthesis. E. coli has several paralogs closely related to dihydrodipicoline synthase (DapA), as well as the more distant N-acetylneuraminate lyase. In Pyrococcus horikoshii, the bidirectional best hit with E. coli is to an uncharacterized paralog of DapA, not DapA itself, and it is omitted from the seed. The putative members from the Chlamydias (pathogens with a parasitic metabolism) are easily the most divergent members of the multiple alignment. [Amino acid biosynthesis, Aspartate family]


Pssm-ID: 129757 [Multi-domain]  Cd Length: 285  Bit Score: 154.02  E-value: 5.65e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925453    7 GVMPALLTPFDNQQRLDIESLRRLVRFNIGQGVDGLYVGGSTGEAFVQNRVEREQVLEIVAEEAKGKVTLIAHVGTVSTE 86
Cdd:TIGR00674   1 GVITALITPFKEDGSVDFAALEKLIDFQIENGTDAIVVVGTTGESPTLSHEEHKKVIEFVVDLVNGRVPVIAGTGSNATE 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925453   87 ESQQLASAAHRYGFDAVSAVTPFYYPFSFEEHCDHYRAIIDSADgLPMVVYNIPALSGVKLTLDQINTLVTLPGVGALKQ 166
Cdd:TIGR00674  81 EAISLTKFAEDVGADGFLVVTPYYNKPTQEGLYQHFKAIAEEVD-LPIILYNVPSRTGVSLYPETVKRLAEEPNIVAIKE 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925453  167 TSGDLYQMEQIRRAHP-DLVLYNGYDEIFASGLLAGADGGIGSTYNIMGWRYQGIVKALKEGDIRTAQKLQTECNKVIDL 245
Cdd:TIGR00674 160 ATGNLERISEIKAIAPdDFVVLSGDDALTLPMMALGGKGVISVTANVAPKLMKEMVNNALEGDFAEAREIHQKLMPLHKA 239
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*..
gi 489925453  246 LIKVGVFRGLKTVLHYMDVVSVPLcRKPFAPVDEHYLPELKALANQL 292
Cdd:TIGR00674 240 LFIETNPIPVKTALALLGLIEGEL-RLPLTELSEEHRNKLRDVLKDL 285
PLN02417 PLN02417
dihydrodipicolinate synthase
7-291 1.00e-34

dihydrodipicolinate synthase


Pssm-ID: 178038  Cd Length: 280  Bit Score: 127.07  E-value: 1.00e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925453   7 GVMPALLTPFDNQQRLDIESLRRLVRFNIGQGVDGLYVGGSTGEAFVQNRVEREQVLEIVAEEAKGKVTLIAHVGTVSTE 86
Cdd:PLN02417   4 RLITAIKTPYLPDGRFDLEAYDSLVNMQIENGAEGLIVGGTTGEGQLMSWDEHIMLIGHTVNCFGGKIKVIGNTGSNSTR 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925453  87 ESQQLASAAHRYGFDAVSAVTPFYYPFSFEEHCDHYRAIIDSAdglPMVVYNIPALSGVKLTLDQINTLVTLPGVGALKQ 166
Cdd:PLN02417  84 EAIHATEQGFAVGMHAALHINPYYGKTSQEGLIKHFETVLDMG---PTIIYNVPGRTGQDIPPEVIFKIAQHPNFAGVKE 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925453 167 TSGDlyqmEQIRR-AHPDLVLYNGYD-EIFASGLLAGADGGIGSTYNIMGWRYQGIVKALKEGDIRTA-----QKLQTEC 239
Cdd:PLN02417 161 CTGN----DRVKQyTEKGILLWSGNDdECHDARWDYGADGVISVTSNLVPGLMHKLMFAGKNKELNDKllplmDWLFCEP 236
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|..
gi 489925453 240 NKVidllikvgvfrGLKTVLHYMDVVSvPLCRKPFAPVDEHYLPELKALANQ 291
Cdd:PLN02417 237 NPI-----------GLNTALAQLGLIR-PVFRLPYVPLDLAKRAEFVALVKA 276
KDG_aldolase cd00953
KDG (2-keto-3-deoxygluconate) aldolases found in archaea; KDG (2-keto-3-deoxygluconate) ...
12-280 5.32e-28

KDG (2-keto-3-deoxygluconate) aldolases found in archaea; KDG (2-keto-3-deoxygluconate) aldolases found in archaea. This subfamily of enzymes is adapted for high thermostability and shows specificity for non-phosphorylated substrates. The enzyme catalyses the reversible aldol cleavage of 2-keto-3-dexoygluconate to pyruvate and glyceraldehyde, the third step of a modified non-phosphorylated Entner-Doudoroff pathway of glucose oxidation. KDG aldolase shows no significant sequence similarity to microbial 2-keto-3-deoxyphosphogluconate (KDPG) aldolases, and the enzyme shows no activity with glyceraldehyde 3-phosphate as substrate. The enzyme is a tetramer and a member of the DHDPS family of Schiff-base-dependent class I aldolases.


Pssm-ID: 188640  Cd Length: 279  Bit Score: 109.01  E-value: 5.32e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925453  12 LLTPFDNQqRLDIESLRRLVRFNIGQGVDGLYVGGSTGEAFVQNRVEREQVLEIVAEEAKgkvTLIAHVGTVSTEESQQL 91
Cdd:cd00953    8 VITPFTGN-KIDKEKFKKHCENLISKGIDYVFVAGTTGLGPSLSFQEKLELLKAYSDITD---KVIFQVGSLNLEESIEL 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925453  92 ASAAHRYGFDAVSAVTPFYYPFSFEEHCDHYRAIIDSAdgLPMVVYNIPALSGVKLTLDQINTLVTLPG-VGALKQTSGD 170
Cdd:cd00953   84 ARAAKSFGIYAIASLPPYYFPGIPEEWLIKYFTDISSP--YPTFIYNYPKATGYDINARMAKEIKKAGGdIIGVKDTNED 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925453 171 LYQMEQIRRAHPDLVLYNGYDEIFASGLLAGADGGIGSTYNIMgwrYQGIVKALKEGDIRTAQKLQTECNKVIDLLIKVG 250
Cdd:cd00953  162 ISHMLEYKRLVPDFKVYSGPDSLIFSALRSGLDGSVAAASNYL---PEVFVKIKDHVAIEDAFKLQFLINEVLDASRKYG 238
                        250       260       270
                 ....*....|....*....|....*....|
gi 489925453 251 VFRGLKTVLHYMDVVSVPLCRKPFAPVDEH 280
Cdd:cd00953  239 SWSANYSLVKIFQGYDAGEPRPPFYPLDEE 268
PRK03620 PRK03620
5-dehydro-4-deoxyglucarate dehydratase; Provisional
3-200 1.07e-17

5-dehydro-4-deoxyglucarate dehydratase; Provisional


Pssm-ID: 235141  Cd Length: 303  Bit Score: 81.40  E-value: 1.07e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925453   3 RDLKGVMPA-LL----TPFDNQQRLDIESLRRLVRFNIGQGVDGLYVGGSTGEAFVQNRVEREQVLEIVAEEAKGKVTLI 77
Cdd:PRK03620   1 QELKQILGSgLLsfpvTPFDADGSFDEAAYREHLEWLAPYGAAALFAAGGTGEFFSLTPDEYSQVVRAAVETTAGRVPVI 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925453  78 AHVGTvSTEESQQLASAAHRYGFDAVSAVTPFYYPFSFEEHCDHYRAIIDSADgLPMVVYNipaLSGVKLTLDQINTLVT 157
Cdd:PRK03620  81 AGAGG-GTAQAIEYAQAAERAGADGILLLPPYLTEAPQEGLAAHVEAVCKSTD-LGVIVYN---RDNAVLTADTLARLAE 155
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*..
gi 489925453 158 -LPGVGALKQTSGDLYQMEQIRRAHPDLVLY-NGYD--EIFASGLLA 200
Cdd:PRK03620 156 rCPNLVGFKDGVGDIELMQRIVRALGDRLLYlGGLPtaEVFAAAYLA 202
KDGDH cd00951
5-dehydro-4-deoxyglucarate dehydratase, also called 5-keto-4-deoxy-glucarate dehydratase ...
13-200 2.30e-17

5-dehydro-4-deoxyglucarate dehydratase, also called 5-keto-4-deoxy-glucarate dehydratase (KDGDH); 5-dehydro-4-deoxyglucarate dehydratase, also called 5-keto-4-deoxy-glucarate dehydratase (KDGDH), which is member of dihydrodipicolinate synthase (DHDPS) family that comprises several pyruvate-dependent class I aldolases. The enzyme is involved in glucarate metabolism, and its mechanism presumbly involves a Schiff-base intermediate similar to members of DHDPS family. While in the case of Pseudomonas sp. 5-dehydro-4-deoxy-D-glucarate is degraded by KDGDH to 2,5-dioxopentanoate, in certain species of Enterobacteriaceae it is degraded instead to pyruvate and glycerate.


Pssm-ID: 188638  Cd Length: 289  Bit Score: 80.06  E-value: 2.30e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925453  13 LTPFDNQQRLDIESLRRLVRFNIGQGVDGLYVGGSTGEAFVQNRVEREQVLEIVAEEAKGKVTLIAHVGTvSTEESQQLA 92
Cdd:cd00951    9 VTHFDADGSFDEDAYRAHVEWLLSYGAAALFAAGGTGEFFSLTPDEYAQVVRAAVEETAGRVPVLAGAGY-GTATAIAYA 87
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925453  93 SAAHRYGFDAVSAVTPFYYPFSFEEHCDHYRAIIDSADgLPMVVYNipaLSGVKLTLDQINTLV-TLPGVGALKQTSGDL 171
Cdd:cd00951   88 QAAEKAGADGILLLPPYLTEAPQEGLYAHVEAVCKSTD-LGVIVYN---RANAVLTADSLARLAeRCPNLVGFKDGVGDI 163
                        170       180       190
                 ....*....|....*....|....*....|..
gi 489925453 172 YQMEQIRRAHPDLVLY-NGYD--EIFASGLLA 200
Cdd:cd00951  164 ELMRRIVAKLGDRLLYlGGLPtaEVFALAYLA 195
Aldolase_Class_I cd00945
Class I aldolases; Class I aldolases. The class I aldolases use an active-site lysine which ...
8-208 3.27e-09

Class I aldolases; Class I aldolases. The class I aldolases use an active-site lysine which stabilizes a reaction intermediates via Schiff base formation, and have TIM beta/alpha barrel fold. The members of this family include 2-keto-3-deoxy-6-phosphogluconate (KDPG) and 2-keto-4-hydroxyglutarate (KHG) aldolases, transaldolase, dihydrodipicolinate synthase sub-family, Type I 3-dehydroquinate dehydratase, DeoC and DhnA proteins, and metal-independent fructose-1,6-bisphosphate aldolase. Although structurally similar, the class II aldolases use a different mechanism and are believed to have an independent evolutionary origin.


Pssm-ID: 188634 [Multi-domain]  Cd Length: 201  Bit Score: 55.80  E-value: 3.27e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925453   8 VMPALLTPFDnqqrlDIESLRRLVRFNIGQGVDGLYVGGStgeafvqnrvereqVLEIVAEEAKG-KVTLIAHV----GT 82
Cdd:cd00945    1 IDLTLLHPDA-----TLEDIAKLCDEAIEYGFAAVCVNPG--------------YVRLAADALAGsDVPVIVVVgfptGL 61
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925453  83 VSTEESQQLASAAHRYGFDAVSAVTPFYYPFS--FEEHCDHYRAIIDSAD-GLPMVVYNIPA-LSGVKLTLDQINTLVTL 158
Cdd:cd00945   62 TTTEVKVAEVEEAIDLGADEIDVVINIGSLKEgdWEEVLEEIAAVVEAADgGLPLKVILETRgLKTADEIAKAARIAAEA 141
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 489925453 159 pGVGALKQTSG------DLYQMEQIRRAHPDLV-LYNGYD----EIFASGLLAGADGGIGS 208
Cdd:cd00945  142 -GADFIKTSTGfggggaTVEDVKLMKEAVGGRVgVKAAGGiktlEDALAAIEAGADGIGTS 201
CHBPH_aldolase cd00952
Trans-o-hydroxybenzylidenepyruvate hydratase-aldolase (HBPHA) and trans-2 ...
4-169 1.09e-08

Trans-o-hydroxybenzylidenepyruvate hydratase-aldolase (HBPHA) and trans-2'-carboxybenzalpyruvate hydratase-aldolase (CBPHA); Trans-o-hydroxybenzylidenepyruvate hydratase-aldolase (HBPHA) and trans-2'-carboxybenzalpyruvate hydratase-aldolase (CBPHA). HBPHA catalyzes HBP to salicyaldehyde and pyruvate. This reaction is part of the degradative pathways for naphthalene and naphthalenesulfonates by bacteria. CBPHA is homologous to HBPHA and catalyzes the cleavage of CBP to 2-carboxylbenzaldehyde and pyruvate during the degradation of phenanthrene. They are member of the DHDPS family of Schiff-base-dependent class I aldolases.


Pssm-ID: 188639  Cd Length: 309  Bit Score: 55.14  E-value: 1.09e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925453   4 DLKGV---MPALLTPFDNQQR----LDIESLRRLVRFNIGQGVDGLYVGGSTGEAFVQNRVEREQVLEIVAEEAKGKVTL 76
Cdd:cd00952    1 DIKGVwaiVPTPSKPDASDWRatdtVDLDETARLVERLIAAGVDGILTMGTFGECATLTWEEKQAFVATVVETVAGRVPV 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925453  77 IAHVGTVSTEESQQLASAAHRYGFDAVSAVTPFYYPFSFEEHCDHYRAIIDSADGLPMVVYNIPALSGVKLTLDQINTLV 156
Cdd:cd00952   81 FVGATTLNTRDTIARTRALLDLGADGTMLGRPMWLPLDVDTAVQFYRDVAEAVPEMAIAIYANPEAFKFDFPRAAWAELA 160
                        170
                 ....*....|...
gi 489925453 157 TLPGVGALKQTSG 169
Cdd:cd00952  161 QIPQVVAAKYLGD 173
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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