|
Name |
Accession |
Description |
Interval |
E-value |
| gltD |
PRK12810 |
glutamate synthase subunit beta; Reviewed |
1-497 |
0e+00 |
|
glutamate synthase subunit beta; Reviewed
Pssm-ID: 237213 [Multi-domain] Cd Length: 471 Bit Score: 786.28 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 1 MGDPRGFLKVRtRRELAERPVEERIKDWFDVHAESGvQPWTQEQAARCMDCGTPFCMTGCPLGNLIPEWNDLVRQGKWED 80
Cdd:PRK12810 1 MGKPTGFLEYD-RVDPKKRPVAERIKDFKEFYEPFS-EEQAKIQAARCMDCGIPFCHWGCPVHNYIPEWNDLVYRGRWEE 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 81 AYNRLSMTNNFPEVTGRICPALCEQSCVLGIHQPPTMIKLDEQTIIDQAWDLDYVKPLPPQRLTDQTVAVVGSGPAGLAA 160
Cdd:PRK12810 79 AAERLHQTNNFPEFTGRVCPAPCEGACTLNINFGPVTIKNIERYIIDKAFEEGWVKPDPPVKRTGKKVAVVGSGPAGLAA 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 161 AQQLTRAGHTVVVYEKDDAIGGLMRYGIPNFKLEKGLLDRRVKQMEAEGTRFRTNVEIGKDITWDDLRDRYDAVVVAIGS 240
Cdd:PRK12810 159 ADQLARAGHKVTVFERADRIGGLLRYGIPDFKLEKEVIDRRIELMEAEGIEFRTNVEVGKDITAEELLAEYDAVFLGTGA 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 241 RVPRDMKIPGRELDGIHFALDFLPDATRRIFGVKPVHDITAKDKHVVIIGGGDTGSDCLGTSIRQGAKDVTVLQIMPKEP 320
Cdd:PRK12810 239 YKPRDLGIPGRDLDGVHFAMDFLIQNTRRVLGDETEPFISAKGKHVVVIGGGDTGMDCVGTAIRQGAKSVTQRDIMPMPP 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 321 TSRPDNSPWPTFARTYQKTSSMEEGGEYIYSTDSVNFEGteeekakvniensttaegfvadERGHVTGLKVVSVAPGEnG 400
Cdd:PRK12810 319 SRRNKNNPWPYWPMKLEVSNAHEEGVEREFNVQTKEFEG----------------------ENGKVTGVKVVRTELGE-G 375
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 401 PFTRQPGTERVLPADLVLISVGFLHPDtETILEQMPVELDKRGNIARND-KFATSQDGVFVCGDAGRGQSLVVWAIAEGR 479
Cdd:PRK12810 376 DFEPVEGSEFVLPADLVLLAMGFTGPE-AGLLAQFGVELDERGRVAAPDnAYQTSNPKVFAAGDMRRGQSLVVWAIAEGR 454
|
490
....*....|....*...
gi 489925947 480 SCASAVDEYLTKEkSELP 497
Cdd:PRK12810 455 QAARAIDAYLMGS-TALP 471
|
|
| GOGAT_sm_gam |
TIGR01317 |
glutamate synthases, NADH/NADPH, small subunit; This model represents one of three built for ... |
3-497 |
0e+00 |
|
glutamate synthases, NADH/NADPH, small subunit; This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit or homologous region. TIGR01316 describes a family in several archaeal and deeply branched bacterial lineages of a homotetrameric form for which there is no large subunit. Another model describes glutamate synthase small subunit from gamma and some alpha subdivision Proteobacteria plus paralogs of unknown function. This model describes the small subunit, or homologous region of longer forms proteins, of eukaryotes, Gram-positive bacteria, cyanobacteria, and some other lineages. All members with known function participate in NADH or NADPH-dependent reactions to interconvert between glutamine plus 2-oxoglutarate and two molecules of glutamate.
Pssm-ID: 162300 [Multi-domain] Cd Length: 485 Bit Score: 599.89 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 3 DPRGFLKVrTRRELAERPVEERIKDWFDVHAesgvqPWTQE----QAARCMDCGTPFCM--TGCPLGNLIPEWNDLVRQG 76
Cdd:TIGR01317 1 KPTGFLEY-KRRKPTERDPRTRLKDWKEFTN-----PFDKEsakyQAARCMDCGTPFCHndSGCPLNNLIPEFNDLVFRG 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 77 KWEDAYNRLSMTNNFPEVTGRICPALCEQSCVLGIHQPPTMIKLDEQTIIDQAWDLDYVKPLPPQRLTDQTVAVVGSGPA 156
Cdd:TIGR01317 75 RWKEALDRLHATNNFPEFTGRVCPAPCEGACTLGISEDPVGIKSIERIIIDKGFQEGWVQPRPPSKRTGKKVAVVGSGPA 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 157 GLAAAQQLTRAGHTVVVYEKDDAIGGLMRYGIPNFKLEKGLLDRRVKQMEAEGTRFRTNVEIGKDITWDDLRDRYDAVVV 236
Cdd:TIGR01317 155 GLAAADQLNRAGHTVTVFEREDRCGGLLMYGIPNMKLDKAIVDRRIDLLSAEGIDFVTNTEIGVDISADELKEQFDAVVL 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 237 AIGSRVPRDMKIPGRELDGIHFALDFLPDATRRIFG--VKPVHDITAKDKHVVIIGGGDTGSDCLGTSIRQGAKDVTVLQ 314
Cdd:TIGR01317 235 AGGATKPRDLPIPGRELKGIHYAMEFLPSATKALLGkdFKDIIFIKAKGKKVVVIGGGDTGADCVGTSLRHGAASVHQFE 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 315 IMPKEPTSRPDNSPWPTFARTYQKTSSMEEGGEYiYSTDSVNFegteeekakvnienSTTAEGFVADERGHVTGLKVVSV 394
Cdd:TIGR01317 315 IMPKPPEARAKDNPWPEWPRVYRVDYAHEEAAAH-YGRDPREY--------------SILTKEFIGDDEGKVTALRTVRV 379
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 395 APGENG----PFTRQPGTERVLPADLVLISVGFLHPDtETILEQMPVELDKRGNIARN-DKFATSQDGVFVCGDAGRGQS 469
Cdd:TIGR01317 380 EWKKSQdgkwQFVEIPGSEEVFEADLVLLAMGFVGPE-QILLDDFGVKKTRRGNISAGyDDYSTSIPGVFAAGDCRRGQS 458
|
490 500
....*....|....*....|....*...
gi 489925947 470 LVVWAIAEGRSCASAVDEYLTKEkSELP 497
Cdd:TIGR01317 459 LIVWAINEGRKAAAAVDRYLMGS-SVLP 485
|
|
| GltD |
COG0493 |
NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport ... |
24-488 |
0e+00 |
|
NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport and metabolism, General function prediction only]; NADPH-dependent glutamate synthase beta chain or related oxidoreductase is part of the Pathway/BioSystem: Glutamine biosynthesis
Pssm-ID: 440259 [Multi-domain] Cd Length: 434 Bit Score: 591.72 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 24 RIKDWFDVHAESGVQPWtQEQAARCMDCGTPFCMTGCPLGNLIPEWNDLVRQGKWEDAYNRLSMTNNFPEVTGRICPALC 103
Cdd:COG0493 1 RIKDFREVYPGLSEEEA-IEQAARCLDCGDPPCQTGCPVGNDIPEWIRLIAEGDYEEALELIHETNPFPEVCGRVCPAPC 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 104 EQSCVLGIHQPPTMIKLDEQTIIDQAWDLDYVKPLPPQRLTDQTVAVVGSGPAGLAAAQQLTRAGHTVVVYEKDDAIGGL 183
Cdd:COG0493 80 EGACVRGIVDEPVAIGALERFIADKAFEEGWVKPPPPAPRTGKKVAVVGSGPAGLAAAYQLARAGHEVTVFEALDKPGGL 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 184 MRYGIPNFKLEKGLLDRRVKQMEAEGTRFRTNVEIGKDITWDDLRDRYDAVVVAIGSRVPRDMKIPGRELDGIHFALDFL 263
Cdd:COG0493 160 LRYGIPEFRLPKDVLDREIELIEALGVEFRTNVEVGKDITLDELLEEFDAVFLATGAGKPRDLGIPGEDLKGVHSAMDFL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 264 PDATRRifgvKPVHDITAKDKHVVIIGGGDTGSDCLGTSIRQGAKDVTVLQIMPKEptsrpdNSPwptfARTYQKTSSME 343
Cdd:COG0493 240 TAVNLG----EAPDTILAVGKRVVVIGGGNTAMDCARTALRLGAESVTIVYRRTRE------EMP----ASKEEVEEALE 305
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 344 EGGEYIYSTdsvnfeGTEEekakvniensttaegFVADERGHVTGLKVVSV---APGENGPFTRQP--GTERVLPADLVL 418
Cdd:COG0493 306 EGVEFLFLV------APVE---------------IIGDENGRVTGLECVRMelgEPDESGRRRPVPieGSEFTLPADLVI 364
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 489925947 419 ISVGFLhPDTETILEQMPVELDKRGNIARNDK-FATSQDGVFVCGDAGRGQSLVVWAIAEGRSCASAVDEY 488
Cdd:COG0493 365 LAIGQT-PDPSGLEEELGLELDKRGTIVVDEEtYQTSLPGVFAGGDAVRGPSLVVWAIAEGRKAARAIDRY 434
|
|
| PRK11749 |
PRK11749 |
dihydropyrimidine dehydrogenase subunit A; Provisional |
12-494 |
1.53e-151 |
|
dihydropyrimidine dehydrogenase subunit A; Provisional
Pssm-ID: 236967 [Multi-domain] Cd Length: 457 Bit Score: 440.77 E-value: 1.53e-151
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 12 TRRELAERPVEERIKDWFDVHAesgvqPWT----QEQAARCMDCGTPFCMTGCPLGNLIPEWNDLVRQGKWEDAYNRLSM 87
Cdd:PRK11749 7 PRIPMPRQDAEERAQNFDEVAP-----GYTpeeaIEEASRCLQCKDAPCVKACPVSIDIPEFIRLIAEGNLKGAAETILE 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 88 TNNFPEVTGRICPA--LCEQSCVLGIHQPPTMIKLDEQTIIDQAWDLDYVKPLPPqRLTDQTVAVVGSGPAGLAAAQQLT 165
Cdd:PRK11749 82 TNPLPAVCGRVCPQerLCEGACVRGKKGEPVAIGRLERYITDWAMETGWVLFKRA-PKTGKKVAVIGAGPAGLTAAHRLA 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 166 RAGHTVVVYEKDDAIGGLMRYGIPNFKLEKGLLDRRVKQMEAEGTRFRTNVEIGKDITWDDLRDRYDAVVVAIGSRVPRD 245
Cdd:PRK11749 161 RKGYDVTIFEARDKAGGLLRYGIPEFRLPKDIVDREVERLLKLGVEIRTNTEVGRDITLDELRAGYDAVFIGTGAGLPRF 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 246 MKIPGRELDGIHFALDFLPdATRRifgVKPVHDItAKDKHVVIIGGGDTGSDCLGTSIRQGAKDVTVLqimpkeptsrpd 325
Cdd:PRK11749 241 LGIPGENLGGVYSAVDFLT-RVNQ---AVADYDL-PVGKRVVVIGGGNTAMDAARTAKRLGAESVTIV------------ 303
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 326 nspwptfartYQKT-----SSMEEggeyiystdsvnFEGTEEEkaKVNIENSTTAEGFVADERGhVTGLKVVSVAPGENG 400
Cdd:PRK11749 304 ----------YRRGreempASEEE------------VEHAKEE--GVEFEWLAAPVEILGDEGR-VTGVEFVRMELGEPD 358
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 401 PFTRQ----PGTERVLPADLVLISVGFlHPDTETILEQMPVELDKRGNIARNDK-FATSQDGVFVCGDAGRGQSLVVWAI 475
Cdd:PRK11749 359 ASGRRrvpiEGSEFTLPADLVIKAIGQ-TPNPLILSTTPGLELNRWGTIIADDEtGRTSLPGVFAGGDIVTGAATVVWAV 437
|
490
....*....|....*....
gi 489925947 476 AEGRSCASAVDEYLTKEKS 494
Cdd:PRK11749 438 GDGKDAAEAIHEYLEGAAS 456
|
|
| PRK12769 |
PRK12769 |
putative oxidoreductase Fe-S binding subunit; Reviewed |
13-492 |
1.18e-92 |
|
putative oxidoreductase Fe-S binding subunit; Reviewed
Pssm-ID: 183733 [Multi-domain] Cd Length: 654 Bit Score: 295.50 E-value: 1.18e-92
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 13 RRELAERPVEERIKDWFDV-HAESGVQpwTQEQAARCMDCGT-PFCMTGCPLGNLIPEWNDLVRQGKWEDAYNRLSMTNN 90
Cdd:PRK12769 193 RGEPDKLAIEARKTGFDEIyLPFRADQ--AQREASRCLKCGEhSICEWTCPLHNHIPQWIELVKAGNIDAAVELSHQTNS 270
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 91 FPEVTGRICPA--LCEQSCVLGIHQPPTMIKLDEQTIIDQA----W--DLDYVKPlppqrlTDQTVAVVGSGPAGLAAAQ 162
Cdd:PRK12769 271 LPEITGRVCPQdrLCEGACTLRDEYGAVTIGNIERYISDQAlakgWrpDLSQVTK------SDKRVAIIGAGPAGLACAD 344
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 163 QLTRAGHTVVVYEKDDAIGGLMRYGIPNFKLEKGLLDRRVKQMEAEGTRFRTNVEIGKDITWDDLRDRYDAVVVAIGSRv 242
Cdd:PRK12769 345 VLARNGVAVTVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSAMGIEFELNCEVGKDISLESLLEDYDAVFVGVGTY- 423
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 243 pRDMK--IPGRELDGIHFALDFLPDATRRIFGVKPVHD---ITAKDKHVVIIGGGDTGSDCLGTSIRQGAKDVTVlqimp 317
Cdd:PRK12769 424 -RSMKagLPNEDAPGVYDALPFLIANTKQVMGLEELPEepfINTAGLNVVVLGGGDTAMDCVRTALRHGASNVTC----- 497
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 318 kepTSRPDNSPWPTFARTYQktSSMEEGGEYIYSTDSVNFEgteeekakvniensttaegfvADERGHVTGLKVVSVAPG 397
Cdd:PRK12769 498 ---AYRRDEANMPGSKKEVK--NAREEGANFEFNVQPVALE---------------------LNEQGHVCGIRFLRTRLG 551
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 398 E-NGPFTRQP----GTERVLPADLVLISVGFlHPDTETILEQMPVELDKRGNIARND----KFATSQDGVFVCGDAGRGQ 468
Cdd:PRK12769 552 EpDAQGRRRPvpipGSEFVMPADAVIMAFGF-NPHGMPWLESHGVTVDKWGRIIADVesqyRYQTSNPKIFAGGDAVRGA 630
|
490 500
....*....|....*....|....
gi 489925947 469 SLVVWAIAEGRSCASAVDEYLTKE 492
Cdd:PRK12769 631 DLVVTAMAEGRHAAQGIIDWLGVK 654
|
|
| PRK12771 |
PRK12771 |
putative glutamate synthase (NADPH) small subunit; Provisional |
17-502 |
2.52e-85 |
|
putative glutamate synthase (NADPH) small subunit; Provisional
Pssm-ID: 237198 [Multi-domain] Cd Length: 564 Bit Score: 274.06 E-value: 2.52e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 17 AERPVEERIKDW---FDVHAESGVQPWTQEQaarcmdcgTPFCMTGCPLGNLIPEWNDLVRQGKWEDAYNRLSMTNNFPE 93
Cdd:PRK12771 15 AAFDALTLPDGFsdeIATGPWRHKCPVYVDQ--------TPPCNAACPAGEDIRGWLALVRGGDYEYAWRRLTKDNPFPA 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 94 VTGRICPALCEQSCVLGIHQPPTMIKLDEQTIIDQAwDLDYVKPLPPQRLTDQTVAVVGSGPAGLAAAQQLTRAGHTVVV 173
Cdd:PRK12771 87 VMGRVCYHPCESGCNRGQVDDAVGINAVERFLGDYA-IANGWKFPAPAPDTGKRVAVIGGGPAGLSAAYHLRRMGHAVTI 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 174 YEKDDAIGGLMRYGIPNFKLEKGLLDRRVKQMEAEGTRFRTNVEIGKDITWDDLRDRYDAVVVAIGSRVPRDMKIPGREL 253
Cdd:PRK12771 166 FEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRVGEDITLEQLEGEFDAVFVAIGAQLGKRLPIPGEDA 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 254 DGIHFALDFLpdatRRIFGVKPVHditaKDKHVVIIGGGDTGSDCLGTSIRQGAKDVTVlqimpkepTSRPDNSPWPTFA 333
Cdd:PRK12771 246 AGVLDAVDFL----RAVGEGEPPF----LGKRVVVIGGGNTAMDAARTARRLGAEEVTI--------VYRRTREDMPAHD 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 334 RTYQktSSMEEGGEYIYSTDSVNFEGTEEEKAKVNIensTTAEGFVADERGHvtglkvvsvapgeNGPFTrqpGTERVLP 413
Cdd:PRK12771 310 EEIE--EALREGVEINWLRTPVEIEGDENGATGLRV---ITVEKMELDEDGR-------------PSPVT---GEEETLE 368
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 414 ADLVLISVGflhPDTET-ILEQMPVELDKRGNIARNDKFA-TSQDGVFVCGDAGRGQSLVVWAIAEGRSCASAVDEYLTK 491
Cdd:PRK12771 369 ADLVVLAIG---QDIDSaGLESVPGVEVGRGVVQVDPNFMmTGRPGVFAGGDMVPGPRTVTTAIGHGKKAARNIDAFLGG 445
|
490
....*....|.
gi 489925947 492 EksELPAPIKA 502
Cdd:PRK12771 446 E--PYEHRPKR 454
|
|
| PRK12831 |
PRK12831 |
putative oxidoreductase; Provisional |
9-493 |
6.70e-80 |
|
putative oxidoreductase; Provisional
Pssm-ID: 183780 [Multi-domain] Cd Length: 464 Bit Score: 256.87 E-value: 6.70e-80
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 9 KVRTRrelaERPVEERIKDWFDV----HAESGVqpwtqEQAARCMDCGTPFCMTGCPLGNLIPEWNDLVRQGKWEDAYNR 84
Cdd:PRK12831 8 RVPVR----EQDPEVRATNFEEVclgyNEEEAV-----KEASRCLQCKKPKCVKGCPVSINIPGFISKLKEGDFEEAAKI 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 85 LSMTNNFPEVTGRICP--ALCEQSCVLGIHQPPTMIKLDEQTIIDQAWDLDyVKPLPPQRLTDQTVAVVGSGPAGLAAAQ 162
Cdd:PRK12831 79 IAKYNALPAVCGRVCPqeSQCEGKCVLGIKGEPVAIGKLERFVADWARENG-IDLSETEEKKGKKVAVIGSGPAGLTCAG 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 163 QLTRAGHTVVVYEKDDAIGGLMRYGIPNFKLEK-GLLDRRVKQMEAEGTRFRTNVEIGKDITWDDLRD--RYDAVVVAIG 239
Cdd:PRK12831 158 DLAKMGYDVTIFEALHEPGGVLVYGIPEFRLPKeTVVKKEIENIKKLGVKIETNVVVGKTVTIDELLEeeGFDAVFIGSG 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 240 SRVPRDMKIPGRELDGIHFALDFLpdaTR----RIFgvKPVHDI-TAKDKHVVIIGGGDTGSDCLGTSIRQGAkDVTVL- 313
Cdd:PRK12831 238 AGLPKFMGIPGENLNGVFSANEFL---TRvnlmKAY--KPEYDTpIKVGKKVAVVGGGNVAMDAARTALRLGA-EVHIVy 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 314 ----QIMPkeptsrpdnspwptfARTYQKTSSMEEGGEYIYSTDSVnfegteeekakvniensttaeGFVADERGHVTGL 389
Cdd:PRK12831 312 rrseEELP---------------ARVEEVHHAKEEGVIFDLLTNPV---------------------EILGDENGWVKGM 355
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 390 KVVSVAPGENGPFTRQ-----PGTERVLPADLVLISVGfLHPDtETILEQMP-VELDKRGNI-ARNDKFATSQDGVFVCG 462
Cdd:PRK12831 356 KCIKMELGEPDASGRRrpveiEGSEFVLEVDTVIMSLG-TSPN-PLISSTTKgLKINKRGCIvADEETGLTSKEGVFAGG 433
|
490 500 510
....*....|....*....|....*....|.
gi 489925947 463 DAGRGQSLVVWAIAEGRSCASAVDEYLTKEK 493
Cdd:PRK12831 434 DAVTGAATVILAMGAGKKAAKAIDEYLSKKW 464
|
|
| PRK12809 |
PRK12809 |
putative oxidoreductase Fe-S binding subunit; Reviewed |
5-483 |
7.15e-75 |
|
putative oxidoreductase Fe-S binding subunit; Reviewed
Pssm-ID: 183762 [Multi-domain] Cd Length: 639 Bit Score: 248.40 E-value: 7.15e-75
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 5 RGFLKVRTRRELAERPVEERIKDWFDVHAESGVQPWTQEqAARCMDCG-TPFCMTGCPLGNLIPEWNDLVRQGKWEDAYN 83
Cdd:PRK12809 168 AALLPVNSRKGADKISASERKTHFGEIYCGLDPQQATYE-SDRCVYCAeKANCNWHCPLHNAIPDYIRLVQEGKIIEAAE 246
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 84 RLSMTNNFPEVTGRICPA--LCEQSCVLGIHQPPTMIKLDEQTIIDQA----WDLDYVKPLPPQrltdQTVAVVGSGPAG 157
Cdd:PRK12809 247 LCHQTSSLPEICGRVCPQdrLCEGACTLKDHSGAVSIGNLERYITDTAlamgWRPDVSKVVPRS----EKVAVIGAGPAG 322
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 158 LAAAQQLTRAGHTVVVYEKDDAIGGLMRYGIPNFKLEKGLLDRRVKQMEAEGTRFRTNVEIGKDITWDDLRDRYDAVVVA 237
Cdd:PRK12809 323 LGCADILARAGVQVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIGRDITFSDLTSEYDAVFIG 402
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 238 IGSRVPRDMKIPGRELDGIHFALDFLPDATRRIFGVK-----PVHDItaKDKHVVIIGGGDTGSDCLGTSIRQGAKDVTV 312
Cdd:PRK12809 403 VGTYGMMRADLPHEDAPGVIQALPFLTAHTRQLMGLPeseeyPLTDV--EGKRVVVLGGGDTTMDCLRTSIRLNAASVTC 480
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 313 lqimpkeptsrpdnspwptfartyqktssmeeggeyIYSTDSVNFEGTEEE-----KAKVNIENSTTAEGFVADERGHVT 387
Cdd:PRK12809 481 ------------------------------------AYRRDEVSMPGSRKEvvnarEEGVEFQFNVQPQYIACDEDGRLT 524
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 388 GLKVVSVAPGENGPFTR---QP--GTERVLPADLVLISVGFlHPDTETILEQMPVELDKRGNIARNDK-FATSQ---DGV 458
Cdd:PRK12809 525 AVGLIRTAMGEPGPDGRrrpRPvaGSEFELPADVLIMAFGF-QAHAMPWLQGSGIKLDKWGLIQTGDVgYLPTQthlKKV 603
|
490 500
....*....|....*....|....*
gi 489925947 459 FVCGDAGRGQSLVVWAIAEGRSCAS 483
Cdd:PRK12809 604 FAGGDAVHGADLVVTAMAAGRQAAR 628
|
|
| gltA |
TIGR01316 |
glutamate synthase (NADPH), homotetrameric; This protein is homologous to the small subunit of ... |
20-489 |
4.82e-73 |
|
glutamate synthase (NADPH), homotetrameric; This protein is homologous to the small subunit of NADPH and NADH forms of glutamate synthase as found in eukaryotes and some bacteria. This protein is found in numerous species having no homolog of the glutamate synthase large subunit. The prototype of the family, from Pyrococcus sp. KOD1, was shown to be active as a homotetramer and to require NADPH. [Amino acid biosynthesis, Glutamate family]
Pssm-ID: 130383 [Multi-domain] Cd Length: 449 Bit Score: 238.62 E-value: 4.82e-73
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 20 PVEERIKDWFDVHAESGVQPWTQEqAARCMDC--GTPFCMTGCPLGNLIPEWNDLVRQGKWEDAYNRLSMTNNFPEVTGR 97
Cdd:TIGR01316 1 PPEERSKLFQEAALGYTEQLALVE-AQRCLNCkdATKPCIKGCPVHVPIPEFIAKIQEGDFKGAVDIIKTTSLLPAICGR 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 98 ICPA--LCEQSCVLGIHQP----PTMIKLDEQTIIDqaWDLDYVKPLPPQRL--TDQTVAVVGSGPAGLAAAQQLTRAGH 169
Cdd:TIGR01316 80 VCPQerQCEGQCTVGKMFKdvgkPVSIGALERFVAD--WERQHGIETEPEKApsTHKKVAVIGAGPAGLACASELAKAGH 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 170 TVVVYEKDDAIGGLMRYGIPNFKLEKGLLDRRVKQMEAEGTRFRTNVEIGKDITWDDLRDRYDAVVVAIGSRVPRDMKIP 249
Cdd:TIGR01316 158 SVTVFEALHKPGGVVTYGIPEFRLPKEIVVTEIKTLKKLGVTFRMNFLVGKTATLEELFSQYDAVFIGTGAGLPKLMNIP 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 250 GRELDGIHFALDFLPDATRRIFGVKPVHDI-TAKDKHVVIIGGGDTGSDCLGTSIRQGAkDVTVLQIMPKEPTSrpdnsp 328
Cdd:TIGR01316 238 GEELCGVYSANDFLTRANLMKAYEFPHADTpVYAGKSVVVIGGGNTAVDSARTALRLGA-EVHCLYRRTREDMT------ 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 329 wptfARTYQKTSSMEEGGEYIYSTDSVNFEGteeekakvniensttaegfvaDERGHVTGLKVVSVAPGE----NGP-FT 403
Cdd:TIGR01316 311 ----ARVEEIAHAEEEGVKFHFLCQPVEIIG---------------------DEEGNVRAVKFRKMDCQEqidsGERrFL 365
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 404 RQPGTERVLPADLVLISVGfLHPDtETILEQMPVELDKRGNIARNDKFATSQDGVFVCGDAGRGQSLVVWAIAEGRSCAS 483
Cdd:TIGR01316 366 PCGDAECKLEADAVIVAIG-NGSN-PIMAETTRLKTSERGTIVVDEDQRTSIPGVFAGGDIILGAATVIRAMGQGKRAAK 443
|
....*.
gi 489925947 484 AVDEYL 489
Cdd:TIGR01316 444 SINEYL 449
|
|
| PRK12778 |
PRK12778 |
bifunctional dihydroorotate dehydrogenase B NAD binding subunit/NADPH-dependent glutamate ... |
9-492 |
5.80e-71 |
|
bifunctional dihydroorotate dehydrogenase B NAD binding subunit/NADPH-dependent glutamate synthase;
Pssm-ID: 237200 [Multi-domain] Cd Length: 752 Bit Score: 240.41 E-value: 5.80e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 9 KVRTRRE---LAERPVEERIKDWFdvhaESGVQPWTQEQA----ARCMDCGTPFCMTGCPLGNLIPEWNDLVRQGKWEDA 81
Cdd:PRK12778 289 KERTAIErvpMPELDPEYRAHNRF----EEVNLGLTKEQAmteaKRCLDCKNPGCVEGCPVGIDIPRFIKNIERGNFLEA 364
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 82 YNRLSMTNNFPEVTGRICP--ALCEQSCVLGI-HQPPTMIKLDEQTIIDqaWDLDYVKPLPPQRL--TDQTVAVVGSGPA 156
Cdd:PRK12778 365 AKILKETSALPAVCGRVCPqeKQCESKCIHGKmGEEAVAIGYLERFVAD--YERESGNISVPEVAekNGKKVAVIGSGPA 442
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 157 GLAAAQQLTRAGHTVVVYEKDDAIGGLMRYGIPNFKLEKGLLDRRVKQMEAEGTRFRTNVEIGKDITWDDLR-DRYDAVV 235
Cdd:PRK12778 443 GLSFAGDLAKRGYDVTVFEALHEIGGVLKYGIPEFRLPKKIVDVEIENLKKLGVKFETDVIVGKTITIEELEeEGFKGIF 522
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 236 VAIGSRVPRDMKIPGRELDGIHFALDFLpdaTRR--IFGVKPVHDITAK-DKHVVIIGGGDTGSDCLGTSIRQGAKDVTV 312
Cdd:PRK12778 523 IASGAGLPNFMNIPGENSNGVMSSNEYL---TRVnlMDAASPDSDTPIKfGKKVAVVGGGNTAMDSARTAKRLGAERVTI 599
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 313 LQimpkeptsRPDNSPWPtfARTYQKTSSMEEGGEYIYSTDSVNfegteeekakvniensttaegFVADERGHVTGLKVV 392
Cdd:PRK12778 600 VY--------RRSEEEMP--ARLEEVKHAKEEGIEFLTLHNPIE---------------------YLADEKGWVKQVVLQ 648
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 393 SVAPGENGPFTRQ-----PGTERVLPADLVLISVGfLHPD---TETILEqmpVELDKRGNIARNDKFATSQDGVFVCGDA 464
Cdd:PRK12778 649 KMELGEPDASGRRrpvaiPGSTFTVDVDLVIVSVG-VSPNplvPSSIPG---LELNRKGTIVVDEEMQSSIPGIYAGGDI 724
|
490 500
....*....|....*....|....*...
gi 489925947 465 GRGQSLVVWAIAEGRSCASAVDEYLTKE 492
Cdd:PRK12778 725 VRGGATVILAMGDGKRAAAAIDEYLSSK 752
|
|
| PRK12814 |
PRK12814 |
putative NADPH-dependent glutamate synthase small subunit; Provisional |
48-503 |
1.59e-59 |
|
putative NADPH-dependent glutamate synthase small subunit; Provisional
Pssm-ID: 139246 [Multi-domain] Cd Length: 652 Bit Score: 207.66 E-value: 1.59e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 48 CMDCGTPfCMTGCPLGNLIPEWNDLVRQGKWEDAYNRLSMTNNFPEVTGRICPALCEQSCVL-GIHQPPTMIKLDEQtii 126
Cdd:PRK12814 97 CGDCLGP-CELACPAGCNIPGFIAAIARGDDREAIRIIKETIPLPGILGRICPAPCEEACRRhGVDEPVSICALKRY--- 172
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 127 dqAWDLD------YVKPLPPQrlTDQTVAVVGSGPAGLAAAQQLTRAGHTVVVYEKDDAIGGLMRYGIPNFKLEKGLLDR 200
Cdd:PRK12814 173 --AADRDmesaerYIPERAPK--SGKKVAIIGAGPAGLTAAYYLLRKGHDVTIFDANEQAGGMMRYGIPRFRLPESVIDA 248
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 201 RVKQMEAEGTRFRTNVEIGKDITWDDLRDRYDAVVVAIGSRVPRDMKIPGRELDGIHFALDFLPDATrriFGVKPvhdit 280
Cdd:PRK12814 249 DIAPLRAMGAEFRFNTVFGRDITLEELQKEFDAVLLAVGAQKASKMGIPGEELPGVISGIDFLRNVA---LGTAL----- 320
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 281 AKDKHVVIIGGGDTGSDCLGTSIRQGAKDVTVLQIMPKEptSRPDNSPwptfartyqktssmeEGGEYIYstdsvnfEGT 360
Cdd:PRK12814 321 HPGKKVVVIGGGNTAIDAARTALRLGAESVTILYRRTRE--EMPANRA---------------EIEEALA-------EGV 376
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 361 E--EEKAKVNIENSttaEGFVAderghVTGLKVVSVAPGENGpfTRQP----GTERVLPADLVLISVG-FLHPdteTILE 433
Cdd:PRK12814 377 SlrELAAPVSIERS---EGGLE-----LTAIKMQQGEPDESG--RRRPvpveGSEFTLQADTVISAIGqQVDP---PIAE 443
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 489925947 434 QMPVELDKRGNIARNDK-FATSQDGVFVCGDAGRGQSLVVWAIAEGRSCASAVDEYLT-KEKSELPAPIKAS 503
Cdd:PRK12814 444 AAGIGTSRNGTVKVDPEtLQTSVAGVFAGGDCVTGADIAINAVEQGKRAAHAIDLFLNgKPVTAPVQPFNSS 515
|
|
| PRK12775 |
PRK12775 |
putative trifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta/ferritin ... |
12-494 |
1.01e-58 |
|
putative trifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta/ferritin domain-containing protein; Provisional
Pssm-ID: 183738 [Multi-domain] Cd Length: 1006 Bit Score: 209.80 E-value: 1.01e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 12 TRRELAERPVEERIKDWFDVHAESGVQPWTQEqAARCMDCGTPFCMTGCPLGNLIPEW--NDLVRQgkWEDAYNRLSMTN 89
Cdd:PRK12775 298 HQTPMPERDAVERARNFKEVNLGYSLEDALQE-AERCIQCAKPTCIAGCPVQIDIPVFirHVVVRD--FDGALEVIYEAS 374
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 90 NFPEVTGRICP--ALCEQSCVLGIHQPPTMIKLDEQTIIDQAwdldYVKPLPPQRLTDQ--TVAVVGSGPAGLAAAQQLT 165
Cdd:PRK12775 375 IFPSICGRVCPqeTQCEAQCIIAKKHESVGIGRLERFVGDNA----RAKPVKPPRFSKKlgKVAICGSGPAGLAAAADLV 450
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 166 RAGHTVVVYEKDDAIGGLMRYGIPNFKLEKGLLDRRVKQMEAEGTRFRTNVEIGKDITWDDL-RDR-YDAVVVAIGSRVP 243
Cdd:PRK12775 451 KYGVDVTVYEALHVVGGVLQYGIPSFRLPRDIIDREVQRLVDIGVKIETNKVIGKTFTVPQLmNDKgFDAVFLGVGAGAP 530
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 244 RDMKIPGRELDGIHFALDFLPDATRRIFGVKPVHDI-TAKDKHVVIIGGGDTGSDCLGTSIRQGAKdvTVLQIMPKEPTS 322
Cdd:PRK12775 531 TFLGIPGEFAGQVYSANEFLTRVNLMGGDKFPFLDTpISLGKSVVVIGAGNTAMDCLRVAKRLGAP--TVRCVYRRSEAE 608
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 323 RPdnspwptfARTYQKTSSMEEGGEYIYSTDSVNfegteeekakvniensttaegFVADERGHVTGLKVVSV---APGEN 399
Cdd:PRK12775 609 AP--------ARIEEIRHAKEEGIDFFFLHSPVE---------------------IYVDAEGSVRGMKVEEMelgEPDEK 659
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 400 GpfTRQP---GTERVLPADLVLISVGflHPDTETILEQMP-VELDKRGNIARNDKF-----ATSQDGVFVCGDAGRGQSL 470
Cdd:PRK12775 660 G--RRKPmptGEFKDLECDTVIYALG--TKANPIITQSTPgLALNKWGNIAADDGKlestqSTNLPGVFAGGDIVTGGAT 735
|
490 500
....*....|....*....|....
gi 489925947 471 VVWAIAEGRSCASAVDEYLTKEKS 494
Cdd:PRK12775 736 VILAMGAGRRAARSIATYLRLGKK 759
|
|
| PRK13984 |
PRK13984 |
putative oxidoreductase; Provisional |
13-492 |
2.57e-58 |
|
putative oxidoreductase; Provisional
Pssm-ID: 172486 [Multi-domain] Cd Length: 604 Bit Score: 203.46 E-value: 2.57e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 13 RRELAERPVEERIKDWFDVhaesgVQPWTQEQA----ARCMDCGtpFCMTGCPLGNLIPEWNDLVRQGKWEDAYNRLSMT 88
Cdd:PRK13984 153 RVEMEEIPPEERVKSFIEI-----VKGYSKEQAmqeaARCVECG--ICTDTCPAHMDIPQYIKAIYKDDLEEGLRWLYKT 225
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 89 NNFPEVTGRICPALCEQSCVLGIHQPPTMIKLDEQTIIDQAWDLDYVKPL---PPQRltDQTVAVVGSGPAGLAAAQQLT 165
Cdd:PRK13984 226 NPLSMVCGRVCTHKCETVCSIGHRGEPIAIRWLKRYIVDNVPVEKYSEILddePEKK--NKKVAIVGSGPAGLSAAYFLA 303
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 166 RAGHTVVVYEKDDAIGGLMRYGIPNFKLEKGLLDRRVKQMEAEGTRFRTNVEIGKDITWDDLRDRYDAVVVAIGSRVPRD 245
Cdd:PRK13984 304 TMGYEVTVYESLSKPGGVMRYGIPSYRLPDEALDKDIAFIEALGVKIHLNTRVGKDIPLEELREKHDAVFLSTGFTLGRS 383
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 246 MKIPGRELDGIHFALDFLPDATRRIFGVKPVHDITakdKHVVIIGGGDTGSDClgtsirqgAKDVTVLQIMPKEPTSRPD 325
Cdd:PRK13984 384 TRIPGTDHPDVIQALPLLREIRDYLRGEGPKPKIP---RSLVVIGGGNVAMDI--------ARSMARLQKMEYGEVNVKV 452
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 326 NSPWPTFARTYQKTSSMEEGGEyiystdsvnfEGTEEEKA----KVNIENsttaegfvaDERGHVTGLKVVSVApGENGP 401
Cdd:PRK13984 453 TSLERTFEEMPADMEEIEEGLE----------EGVVIYPGwgpmEVVIEN---------DKVKGVKFKKCVEVF-DEEGR 512
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 402 FTRQ--PGTERVLPADLVLISVGFLhPDTETILEQMPVELD-KRGNIARNDKFATSQDGVFVCGDAGRGQSlVVWAIAEG 478
Cdd:PRK13984 513 FNPKfdESDQIIVEADMVVEAIGQA-PDYSYLPEELKSKLEfVRGRILTNEYGQTSIPWLFAGGDIVHGPD-IIHGVADG 590
|
490
....*....|....
gi 489925947 479 RSCASAVDEYLTKE 492
Cdd:PRK13984 591 YWAAEGIDMYLRKQ 604
|
|
| PRK12770 |
PRK12770 |
putative glutamate synthase subunit beta; Provisional |
136-492 |
1.52e-46 |
|
putative glutamate synthase subunit beta; Provisional
Pssm-ID: 237197 [Multi-domain] Cd Length: 352 Bit Score: 165.55 E-value: 1.52e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 136 KPLPPqrlTDQTVAVVGSGPAGLAAAQQLTRAGHTVVVYEKDDAIGGLMRYGIPNFKLEKGLLDRRVKQMEAEGTRFRTN 215
Cdd:PRK12770 12 EKPPP---TGKKVAIIGAGPAGLAAAGYLACLGYEVHVYDKLPEPGGLMLFGIPEFRIPIERVREGVKELEEAGVVFHTR 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 216 VEI---------------GKDITWDDLRDRYDAVVVAIGSRVPRDMKIPGRELDGIHFALDFLpdatRRIFGVK------ 274
Cdd:PRK12770 89 TKVccgeplheeegdefvERIVSLEELVKKYDAVLIATGTWKSRKLGIPGEDLPGVYSALEYL----FRIRAAKlgylpw 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 275 -PVHDItaKDKHVVIIGGGDTGSDCLGTSIRQGAKDVTVLqimpkeptsrpdnspwptfartYQKTssMEEGGEYIYSTD 353
Cdd:PRK12770 165 eKVPPV--EGKKVVVVGAGLTAVDAALEAVLLGAEKVYLA----------------------YRRT--INEAPAGKYEIE 218
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 354 SVNFEGTEEekakvnIENsTTAEGFVADERghVTGLKVVSVAPGENGPFTR-----QPGTERVLPADLVLISVGFLhPDT 428
Cdd:PRK12770 219 RLIARGVEF------LEL-VTPVRIIGEGR--VEGVELAKMRLGEPDESGRprpvpIPGSEFVLEADTVVFAIGEI-PTP 288
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 489925947 429 ETILEQMPVELDKRGNIARNDKFATSQDGVFVCGDAGRGQSLVVWAIAEGRSCASAVDEYLTKE 492
Cdd:PRK12770 289 PFAKECLGIELNRKGEIVVDEKHMTSREGVFAAGDVVTGPSKIGKAIKSGLRAAQSIHEWLDLK 352
|
|
| PRK12779 |
PRK12779 |
putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; ... |
59-482 |
7.66e-42 |
|
putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; Provisional
Pssm-ID: 183740 [Multi-domain] Cd Length: 944 Bit Score: 160.38 E-value: 7.66e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 59 GCPLGNLIPEWNDLVRQGKWEDAYNRLSMTNNFPEVTGRICPA--LCEQSCV-----LGIHQPPTMIKLDEQTIIDQAWD 131
Cdd:PRK12779 213 GCPVKIHIPEMLDLLGNGKHREALELIESCNPLPNVTGRVCPQelQCQGVCThtkrpIEIGQLEWYLPQHEKLVNPNANE 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 132 LDYVKPLPPQRLTDQTVAVVGSGPAGLAAAQQLTRAGHTVVVYEKDDAIGGLMRYGIPNFKLEKGLLDRRVKQMEAEGTR 211
Cdd:PRK12779 293 RFAGRISPWAAAVKPPIAVVGSGPSGLINAYLLAVEGFPVTVFEAFHDLGGVLRYGIPEFRLPNQLIDDVVEKIKLLGGR 372
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 212 FRTNVEIGKDITWDDL-RDRYDAVVVAIGSRVPRDMKIPGRELDGIHFALDFLpdaTR--RIFGVKPVHDI---TAKDKH 285
Cdd:PRK12779 373 FVKNFVVGKTATLEDLkAAGFWKIFVGTGAGLPTFMNVPGEHLLGVMSANEFL---TRvnLMRGLDDDYETplpEVKGKE 449
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 286 VVIIGGGDTGSDCLGTSIRQGAkDVTVLQimpkeptsRPDNSPWPtfARTYQKTSSMEEGgeyiystdsvnfegteeeka 365
Cdd:PRK12779 450 VFVIGGGNTAMDAARTAKRLGG-NVTIVY--------RRTKSEMP--ARVEELHHALEEG-------------------- 498
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 366 kVNIENSTTAEGFVADERGHVTGLKVVSV----APGENGPFTRQPG--TERVlPADLVLISVGflhPDTETILE--QMPV 437
Cdd:PRK12779 499 -INLAVLRAPREFIGDDHTHFVTHALLDVnelgEPDKSGRRSPKPTgeIERV-PVDLVIMALG---NTANPIMKdaEPGL 573
|
410 420 430 440
....*....|....*....|....*....|....*....|....*.
gi 489925947 438 ELDKRGNI-ARNDKFATSQDGVFVCGDAGRGQSLVVWAIAEGRSCA 482
Cdd:PRK12779 574 KTNKWGTIeVEKGSQRTSIKGVYSGGDAARGGSTAIRAAGDGQAAA 619
|
|
| TrxB |
COG0492 |
Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones]; |
148-493 |
3.26e-36 |
|
Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 440258 [Multi-domain] Cd Length: 305 Bit Score: 136.40 E-value: 3.26e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 148 VAVVGSGPAGLAAAQQLTRAGHTVVVYEKDdAIGGLMR-----YGIPNFKLE---KGLLDRRVKQMEAEGTRFR----TN 215
Cdd:COG0492 3 VVIIGAGPAGLTAAIYAARAGLKTLVIEGG-EPGGQLAttkeiENYPGFPEGisgPELAERLREQAERFGAEILleevTS 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 216 VEIGKD---ITWDDlRDRY--DAVVVAIGSRvPRDMKIPG-RELD--GIHFAldflpdATRRIFgvkpvhdiTAKDKHVV 287
Cdd:COG0492 82 VDKDDGpfrVTTDD-GTEYeaKAVIIATGAG-PRKLGLPGeEEFEgrGVSYC------ATCDGF--------FFRGKDVV 145
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 288 IIGGGDTGSDcLGTSIRQGAKDVTVlqimpkeptsrpdnspwptfartyqktssmeeggeyIYSTDSvnFEGTE------ 361
Cdd:COG0492 146 VVGGGDSALE-EALYLTKFASKVTL------------------------------------IHRRDE--LRASKilverl 186
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 362 EEKAKVNIENSTTAEGFVADERghVTGLKVVSVapgengpftrQPGTERVLPADLVLISVGFlHPDTEtILEQMPVELDK 441
Cdd:COG0492 187 RANPKIEVLWNTEVTEIEGDGR--VEGVTLKNV----------KTGEEKELEVDGVFVAIGL-KPNTE-LLKGLGLELDE 252
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 489925947 442 RGNIARNDKFATSQDGVFVCGDAgRGQS--LVVWAIAEGRSCASAVDEYLTKEK 493
Cdd:COG0492 253 DGYIVVDEDMETSVPGVFAAGDV-RDYKyrQAATAAGEGAIAALSAARYLEPLK 305
|
|
| Pyr_redox_2 |
pfam07992 |
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ... |
148-478 |
7.84e-35 |
|
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.
Pssm-ID: 400379 [Multi-domain] Cd Length: 301 Bit Score: 132.44 E-value: 7.84e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 148 VAVVGSGPAGLAAAQQLTRAGHTVVVYEKDDAI---GGLMRYGIPNFKLEKGLLDRR---VKQMEAEGTRFRTNVE---- 217
Cdd:pfam07992 3 VVVIGGGPAGLAAALTLAQLGGKVTLIEDEGTCpygGCVLSKALLGAAEAPEIASLWadlYKRKEEVVKKLNNGIEvllg 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 218 ---IGKDITWDDLRDR-----------YDAVVVAIGSRvPRDMKIPGRELDGIHFaLDFLPDATRRIFGVKPvhditakd 283
Cdd:pfam07992 83 tevVSIDPGAKKVVLEelvdgdgetitYDRLVIATGAR-PRLPPIPGVELNVGFL-VRTLDSAEALRLKLLP-------- 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 284 KHVVIIGGGDTGSDCLGTSIRQGaKDVTVLQIMPKEPTSRPdnspwPTFARTYQKtssmeeggeyiystdsvnfegtEEE 363
Cdd:pfam07992 153 KRVVVVGGGYIGVELAAALAKLG-KEVTLIEALDRLLRAFD-----EEISAALEK----------------------ALE 204
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 364 KAKVNIENSTTAEGFVADERghvtGLKVVsvapgengpftrqPGTERVLPADLVLISVGFLhPDTEtILEQMPVELDKRG 443
Cdd:pfam07992 205 KNGVEVRLGTSVKEIIGDGD----GVEVI-------------LKDGTEIDADLVVVAIGRR-PNTE-LLEAAGLELDERG 265
|
330 340 350
....*....|....*....|....*....|....*.
gi 489925947 444 NIARNDKFATSQDGVFVCGDAGRGQ-SLVVWAIAEG 478
Cdd:pfam07992 266 GIVVDEYLRTSVPGIYAAGDCRVGGpELAQNAVAQG 301
|
|
| Fer4_20 |
pfam14691 |
Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster; Domain II of the enzyme ... |
24-130 |
8.93e-27 |
|
Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster; Domain II of the enzyme dihydroprymidine dehydrogenase binds FAD. Dihydroprymidine dehydrogenase catalyzes the first and rate-limiting step of pyrimidine degradation by converting pyrimidines to the corresponding 5,6- dihydro compounds. This domain carries two Fe4-S4 clusters.
Pssm-ID: 434132 [Multi-domain] Cd Length: 113 Bit Score: 104.16 E-value: 8.93e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 24 RIKDWFDVHaesgvQPWTQEQ----AARCMDCGTPFCMTGCPLGNLIPEWNDLVRQGKWEDAYNRLSMTNNFPEVTGRIC 99
Cdd:pfam14691 1 RIKNFEEVA-----LGYTEEEaiaeASRCLQCKDPPCVKGCPVHIDIPEFIKLIAEGNFEGAARIILETNPLPAICGRVC 75
|
90 100 110
....*....|....*....|....*....|....*
gi 489925947 100 PA--LCEQSCVLGI-HQPPTMI-KLdEQTIIDQAW 130
Cdd:pfam14691 76 PQerQCEGACVLGKkGFEPVAIgRL-ERFAADWAR 109
|
|
| PLN02852 |
PLN02852 |
ferredoxin-NADP+ reductase |
148-298 |
7.95e-21 |
|
ferredoxin-NADP+ reductase
Pssm-ID: 215457 Cd Length: 491 Bit Score: 95.15 E-value: 7.95e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 148 VAVVGSGPAGLAAAQQLTRA--GHTVVVYEKDDAIGGLMRYGI-PNFKLEKGLLDRRVKQMEAEGTRFRTNVEIGKDITW 224
Cdd:PLN02852 29 VCVVGSGPAGFYTADKLLKAhdGARVDIIERLPTPFGLVRSGVaPDHPETKNVTNQFSRVATDDRVSFFGNVTLGRDVSL 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 225 DDLRDRYDAVVVAIGSRVPRDMKIPGRELDGIHFALDFL------PDAtrrifgvKPVHDITAKDKHVVIIGGGDTGSDC 298
Cdd:PLN02852 109 SELRDLYHVVVLAYGAESDRRLGIPGEDLPGVLSAREFVwwynghPDC-------VHLPPDLKSSDTAVVLGQGNVALDC 181
|
|
| FadH2 |
COG0446 |
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase ... |
171-464 |
2.30e-20 |
|
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase [Lipid transport and metabolism];
Pssm-ID: 440215 [Multi-domain] Cd Length: 322 Bit Score: 91.80 E-value: 2.30e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 171 VVVYEKDDAIGGLmRYGIPNF-----KLEKGLLDRRVKQMEAEGTRFRTNVEI------GKDITWDDLR-DRYDAVVVAI 238
Cdd:COG0446 8 ITVIEKGPHHSYQ-PCGLPYYvgggiKDPEDLLVRTPESFERKGIDVRTGTEVtaidpeAKTVTLRDGEtLSYDKLVLAT 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 239 GSRvPRDMKIPGRELDGIhFALDFLPDATRRIFGVKpvhdiTAKDKHVVIIGGGDTGSDcLGTSIRQGAKDVTVLqimpk 318
Cdd:COG0446 87 GAR-PRPPPIPGLDLPGV-FTLRTLDDADALREALK-----EFKGKRAVVIGGGPIGLE-LAEALRKRGLKVTLV----- 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 319 EPTSRPDNSPWPTFARTYQKTssMEEGGeyiystdsvnfegteeekakVNIENSTTAEGFVADERGHVTglkvvsvapGE 398
Cdd:COG0446 154 ERAPRLLGVLDPEMAALLEEE--LREHG--------------------VELRLGETVVAIDGDDKVAVT---------LT 202
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 489925947 399 NGpftrqpgteRVLPADLVLISVGFlHPDTEtILEQMPVELDKRGNIARNDKFATSQDGVFVCGDA 464
Cdd:COG0446 203 DG---------EEIPADLVVVAPGV-RPNTE-LAKDAGLALGERGWIKVDETLQTSDPDVYAAGDC 257
|
|
| Lpd |
COG1249 |
Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex ... |
148-482 |
1.26e-18 |
|
Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase [Energy production and conversion]; Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase is part of the Pathway/BioSystem: Glycine cleavagePyruvate oxidation
Pssm-ID: 440861 [Multi-domain] Cd Length: 456 Bit Score: 88.22 E-value: 1.26e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 148 VAVVGSGPAGLAAAQQLTRAGHTVVVYEKDdAIGG-------------------------LMRYGI----PNFKLEKgLL 198
Cdd:COG1249 6 LVVIGAGPGGYVAAIRAAQLGLKVALVEKG-RLGGtclnvgcipskallhaaevahearhAAEFGIsagaPSVDWAA-LM 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 199 DRR---VKQMEA--------------EGT-RF---RTnVEI--GKDITwddlrdrYDAVVVAIGSRvPRDMKIPGRELDG 255
Cdd:COG1249 84 ARKdkvVDRLRGgveellkkngvdviRGRaRFvdpHT-VEVtgGETLT-------ADHIVIATGSR-PRVPPIPGLDEVR 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 256 IH-----FALDFLPdatrrifgvkpvhditakdKHVVIIGGGDTGsdC--------LGTsirqgakDVTVL----QIMPK 318
Cdd:COG1249 155 VLtsdeaLELEELP-------------------KSLVVIGGGYIG--LefaqifarLGS-------EVTLVergdRLLPG 206
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 319 EPtsrpdnspwPTFARTYQKtsSMEEGGeyiystdsvnfegteeekakVNIENSTTAEGFVADERGhvtglKVVSVAPGe 398
Cdd:COG1249 207 ED---------PEISEALEK--ALEKEG--------------------IDILTGAKVTSVEKTGDG-----VTVTLEDG- 249
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 399 ngpftrqpGTERVLPADLVLISVGFlHPDTETI-LEQMPVELDKRGNIARNDKFATSQDGVFVCGDAGRGQSLVVWAIAE 477
Cdd:COG1249 250 --------GGEEAVEADKVLVATGR-RPNTDGLgLEAAGVELDERGGIKVDEYLRTSVPGIYAIGDVTGGPQLAHVASAE 320
|
....*
gi 489925947 478 GRSCA 482
Cdd:COG1249 321 GRVAA 325
|
|
| NirB |
COG1251 |
NAD(P)H-nitrite reductase, large subunit [Energy production and conversion]; |
146-463 |
5.10e-16 |
|
NAD(P)H-nitrite reductase, large subunit [Energy production and conversion];
Pssm-ID: 440863 [Multi-domain] Cd Length: 402 Bit Score: 79.80 E-value: 5.10e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 146 QTVAVVGSGPAGLAAAQQLTRAGHT--VVVYEKDD-----------AIGGlmrygipnfKLEKGLLDRRVKQMEAE-GTR 211
Cdd:COG1251 2 MRIVIIGAGMAGVRAAEELRKLDPDgeITVIGAEPhppynrpplskVLAG---------ETDEEDLLLRPADFYEEnGID 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 212 FRTNVEI------GKDITWDDLRD-RYDAVVVAIGSRvPRDMKIPGRELDGIHfALDFLPDAtRRIfgvkpvHDITAKDK 284
Cdd:COG1251 73 LRLGTRVtaidraARTVTLADGETlPYDKLVLATGSR-PRVPPIPGADLPGVF-TLRTLDDA-DAL------RAALAPGK 143
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 285 HVVIIGGGDTGSDCLGTSIRQGAkDVTVLQIMPkeptsrpdnSPWPTFARtyqktssmEEGGEYIysTDSVnfegteeEK 364
Cdd:COG1251 144 RVVVIGGGLIGLEAAAALRKRGL-EVTVVERAP---------RLLPRQLD--------EEAGALL--QRLL-------EA 196
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 365 AKVNIENSTTAEGFVADERghVTGLKVvsvapgENGpftrqpgteRVLPADLVLISVGfLHPDTEtILEQMPVELDkRGn 444
Cdd:COG1251 197 LGVEVRLGTGVTEIEGDDR--VTGVRL------ADG---------EELPADLVVVAIG-VRPNTE-LARAAGLAVD-RG- 255
|
330
....*....|....*....
gi 489925947 445 IARNDKFATSQDGVFVCGD 463
Cdd:COG1251 256 IVVDDYLRTSDPDIYAAGD 274
|
|
| CzcO |
COG2072 |
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ... |
148-318 |
1.99e-14 |
|
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ion transport and metabolism];
Pssm-ID: 441675 [Multi-domain] Cd Length: 414 Bit Score: 75.28 E-value: 1.99e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 148 VAVVGSGPAGLAAAQQLTRAGHTVVVYEKDDAIGG---LMRY-----GIPN------FKLEKGLLDRRVKQME------- 206
Cdd:COG2072 9 VVVIGAGQAGLAAAYHLRRAGIDFVVLEKADDVGGtwrDNRYpglrlDTPShlyslpFFPNWSDDPDFPTGDEilaylea 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 207 -------AEGTRFRTNVEigkDITWDDLRDRY------------DAVVVAIGS----RVPRdmkIPGRELdgihfaldfl 263
Cdd:COG2072 89 yadkfglRRPIRFGTEVT---SARWDEADGRWtvttddgetltaRFVVVATGPlsrpKIPD---IPGLED---------- 152
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 489925947 264 pdatrriFGVKPVH------DITAKDKHVVIIGGGDTGSDCLgTSIRQGAKDVTVLQ-----IMPK 318
Cdd:COG2072 153 -------FAGEQLHsadwrnPVDLAGKRVLVVGTGASAVQIA-PELARVAAHVTVFQrtppwVLPR 210
|
|
| PRK07233 |
PRK07233 |
hypothetical protein; Provisional |
147-195 |
1.06e-12 |
|
hypothetical protein; Provisional
Pssm-ID: 235977 [Multi-domain] Cd Length: 434 Bit Score: 69.92 E-value: 1.06e-12
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|
gi 489925947 147 TVAVVGSGPAGLAAAQQLTRAGHTVVVYEKDDAIGGLM-RYGIPNFKLEK 195
Cdd:PRK07233 1 KIAIVGGGIAGLAAAYRLAKRGHEVTVFEADDQLGGLAaSFEFGGLPIER 50
|
|
| PRK06292 |
PRK06292 |
dihydrolipoamide dehydrogenase; Validated |
148-464 |
1.27e-11 |
|
dihydrolipoamide dehydrogenase; Validated
Pssm-ID: 235774 [Multi-domain] Cd Length: 460 Bit Score: 66.74 E-value: 1.27e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 148 VAVVGSGPAGLAAAQQLTRAGHTVVVYEKDD------------------------AIGGLMRYGI------PNFK--LE- 194
Cdd:PRK06292 6 VIVIGAGPAGYVAARRAAKLGKKVALIEKGPlggtclnvgcipskaliaaaeafhEAKHAEEFGIhadgpkIDFKkvMAr 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 195 -KGLLDRRVKQMEAEG------TRFRTNVEIGKD--ITWDDLRDRYDAVVVAIGSRVPrdmKIPGreldgihfalDFLPD 265
Cdd:PRK06292 86 vRRERDRFVGGVVEGLekkpkiDKIKGTARFVDPntVEVNGERIEAKNIVIATGSRVP---PIPG----------VWLIL 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 266 ATRrIFGVKPVHDITAKDKHVVIIGGGDTGSDcLGTSI-RQGAKdVTVL----QIMPKEptsrpDNSPWPTFARTYQKts 340
Cdd:PRK06292 153 GDR-LLTSDDAFELDKLPKSLAVIGGGVIGLE-LGQALsRLGVK-VTVFergdRILPLE-----DPEVSKQAQKILSK-- 222
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 341 smeeggeyiystdsvnfegteeekaKVNIEnsttaegfvaderghvTGLKVVSVAPGENGP--FTRQPGTERVLPADLVL 418
Cdd:PRK06292 223 -------------------------EFKIK----------------LGAKVTSVEKSGDEKveELEKGGKTETIEADYVL 261
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 489925947 419 ISVGfLHPDTETI-LEQMPVELDKRGNIARNDKFATSQDGVFVCGDA 464
Cdd:PRK06292 262 VATG-RRPNTDGLgLENTGIELDERGRPVVDEHTQTSVPGIYAAGDV 307
|
|
| NAD_binding_8 |
pfam13450 |
NAD(P)-binding Rossmann-like domain; |
150-196 |
1.69e-11 |
|
NAD(P)-binding Rossmann-like domain;
Pssm-ID: 433218 [Multi-domain] Cd Length: 67 Bit Score: 59.47 E-value: 1.69e-11
10 20 30 40
....*....|....*....|....*....|....*....|....*...
gi 489925947 150 VVGSGPAGLAAAQQLTRAGHTVVVYEKDDAIGGLMR-YGIPNFKLEKG 196
Cdd:pfam13450 1 IVGAGLAGLVAAALLAKRGFRVLVLEKRDRLGGNAYsYRVPGYVFDYG 48
|
|
| HemY |
COG1232 |
Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen ... |
146-185 |
2.26e-11 |
|
Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen oxidase HemY/PPOX is part of the Pathway/BioSystem: Heme biosynthesis
Pssm-ID: 440845 [Multi-domain] Cd Length: 443 Bit Score: 65.62 E-value: 2.26e-11
10 20 30 40
....*....|....*....|....*....|....*....|
gi 489925947 146 QTVAVVGSGPAGLAAAQQLTRAGHTVVVYEKDDAIGGLMR 185
Cdd:COG1232 2 KRVAVIGGGIAGLTAAYRLAKAGHEVTVLEASDRVGGLIR 41
|
|
| HdrA |
COG1148 |
Heterodisulfide reductase, subunit A (polyferredoxin) [Energy production and conversion]; |
136-502 |
1.25e-10 |
|
Heterodisulfide reductase, subunit A (polyferredoxin) [Energy production and conversion];
Pssm-ID: 440762 [Multi-domain] Cd Length: 563 Bit Score: 63.73 E-value: 1.25e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 136 KPLPPQRL-TDQTVAVVGSGPAGLAAAQQLTRAGHTVVVYEKDDAIGGLMR---YGIPNFKLEKGLLDRRVKQMEA---- 207
Cdd:COG1148 130 EPLEPIKVpVNKRALVIGGGIAGMTAALELAEQGYEVYLVEKEPELGGRAAqlhKTFPGLDCPQCILEPLIAEVEAnpni 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 208 -----------EGT--RFRTNVEIG--KDITwddlrDRYDAVVVAIGSRvPRDMKIPGR----ELDGIHFALDF----LP 264
Cdd:COG1148 210 tvytgaeveevSGYvgNFTVTIKKGprEEIE-----IEVGAIVLATGFK-PYDPTKLGEygygKYPNVITNLELerllAA 283
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 265 DATRRIFGVKPVhditakdKHVVII---GGGDTGSD-------CLGTSIRQGAK--------DVTVLQI-Mpkeptsrpd 325
Cdd:COG1148 284 GKILRPSDGKEP-------KSVAFIqcvGSRDEENGlpycsrvCCMYALKQALYlkeknpdaDVYIFYRdI--------- 347
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 326 nspwptfaRTYQK-----TSSMEEGGEYI-YSTDSVnfEGTEEEKAKVNIENSTTaegfvaderghvtglkvvsvapgen 399
Cdd:COG1148 348 --------RTYGKyeefyRRAREDGVRFIrGRVAEI--EEDEGGKLVVTVEDTLL------------------------- 392
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 400 gpftrqpGTERVLPADLVLISVGFL-HPDTETILEQMPVELDKRGNIA-RNDKFA---TSQDGVFVCGDAgRGQSLVVWA 474
Cdd:COG1148 393 -------GEPVEIEADLVVLATGMVpSEDNEELAKLLKLPLDQDGFFLeAHPKLRpveTATDGIFLAGAA-HGPKDIPES 464
|
410 420
....*....|....*....|....*...
gi 489925947 475 IAEGRSCASAVDEYLTKEKSELpAPIKA 502
Cdd:COG1148 465 IAQATAAAARAIQLLSKGELGV-EPSVA 491
|
|
| PLN02172 |
PLN02172 |
flavin-containing monooxygenase FMO GS-OX |
140-186 |
1.03e-09 |
|
flavin-containing monooxygenase FMO GS-OX
Pssm-ID: 215116 [Multi-domain] Cd Length: 461 Bit Score: 60.65 E-value: 1.03e-09
10 20 30 40
....*....|....*....|....*....|....*....|....*..
gi 489925947 140 PQRLTDQTVAVVGSGPAGLAAAQQLTRAGHTVVVYEKDDAIGGLMRY 186
Cdd:PLN02172 5 QNPINSQHVAVIGAGAAGLVAARELRREGHTVVVFEREKQVGGLWVY 51
|
|
| PRK07208 |
PRK07208 |
hypothetical protein; Provisional |
146-185 |
1.10e-09 |
|
hypothetical protein; Provisional
Pssm-ID: 235967 [Multi-domain] Cd Length: 479 Bit Score: 60.67 E-value: 1.10e-09
10 20 30 40
....*....|....*....|....*....|....*....|
gi 489925947 146 QTVAVVGSGPAGLAAAQQLTRAGHTVVVYEKDDAIGGLMR 185
Cdd:PRK07208 5 KSVVIIGAGPAGLTAAYELLKRGYPVTVLEADPVVGGISR 44
|
|
| COG1233 |
COG1233 |
Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and ... |
144-185 |
2.83e-09 |
|
Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and catabolism];
Pssm-ID: 440846 [Multi-domain] Cd Length: 491 Bit Score: 59.48 E-value: 2.83e-09
10 20 30 40
....*....|....*....|....*....|....*....|..
gi 489925947 144 TDQTVAVVGSGPAGLAAAQQLTRAGHTVVVYEKDDAIGGLMR 185
Cdd:COG1233 2 MMYDVVVIGAGIGGLAAAALLARAGYRVTVLEKNDTPGGRAR 43
|
|
| YobN |
COG1231 |
Monoamine oxidase [Amino acid transport and metabolism]; |
148-182 |
4.69e-09 |
|
Monoamine oxidase [Amino acid transport and metabolism];
Pssm-ID: 440844 [Multi-domain] Cd Length: 440 Bit Score: 58.39 E-value: 4.69e-09
10 20 30
....*....|....*....|....*....|....*
gi 489925947 148 VAVVGSGPAGLAAAQQLTRAGHTVVVYEKDDAIGG 182
Cdd:COG1231 10 VVIVGAGLAGLAAARELRKAGLDVTVLEARDRVGG 44
|
|
| PRK06567 |
PRK06567 |
putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; Validated |
57-263 |
6.04e-09 |
|
putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; Validated
Pssm-ID: 235832 [Multi-domain] Cd Length: 1028 Bit Score: 58.76 E-value: 6.04e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 57 MTGCPLGNLIPEWNDLVRQGKWEDAYNRLSMTNNFPEVTG-RICPAlCEQSCVLGiHQPPTMIKLDEQTIIDQAWDLDY- 134
Cdd:PRK06567 281 KQGCPLKQKISEMNYVKAQGFNLSALAIIVIDNPMVAATGhRICND-CSKACIYQ-KQDPVNIPLIESNILEETLKLPYg 358
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 135 ---------------VKPLPpQRLTDQTVAVVGSGPAGLAAAQQLTRAGHTVVV--------------------YEKDDA 179
Cdd:PRK06567 359 leiyllltrwnplniYAPLP-KEPTNYNILVTGLGPAGFSLSYYLLRSGHNVTAidglkitllpfdvhkpikfwHEYKNL 437
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 180 I--------GGLMRYGIpNFKLEKGLLD-RRVKQMEAEGTRFRTNVEIGKDITWDDLRD-RYDAVVVAIGSRVPRDMKIP 249
Cdd:PRK06567 438 LsermprgfGGVAEYGI-TVRWDKNNLDiLRLILERNNNFKYYDGVALDFNITKEQAFDlGFDHIAFCIGAGQPKVLDIE 516
|
250
....*....|....
gi 489925947 250 GRELDGIHFALDFL 263
Cdd:PRK06567 517 NFEAKGVKTASDFL 530
|
|
| PRK06370 |
PRK06370 |
FAD-containing oxidoreductase; |
150-468 |
1.63e-08 |
|
FAD-containing oxidoreductase;
Pssm-ID: 235787 [Multi-domain] Cd Length: 463 Bit Score: 56.75 E-value: 1.63e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 150 VVGSGPAGLAAAQQLTRAGHTVVVYEKDDaIGG---------------------LMR----YGIP-------NFKlekgl 197
Cdd:PRK06370 10 VIGAGQAGPPLAARAAGLGMKVALIERGL-LGGtcvntgcvptktliasaraahLARraaeYGVSvggpvsvDFK----- 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 198 ldrRVKQ-MEAEGTRFRTNVE------------------IGKD-ITWDDLRDRYDAVVVAIGSR--VPRdmkIPGreLDG 255
Cdd:PRK06370 84 ---AVMArKRRIRARSRHGSEqwlrglegvdvfrgharfESPNtVRVGGETLRAKRIFINTGARaaIPP---IPG--LDE 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 256 IH-------FALDFLPdatrrifgvkpvhditakdKHVVIIGGGDTGSDcLGTSIRQGAKDVTVL----QIMPKEPtsrp 324
Cdd:PRK06370 156 VGyltnetiFSLDELP-------------------EHLVIIGGGYIGLE-FAQMFRRFGSEVTVIergpRLLPRED---- 211
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 325 dnspwPTFARTYQKtsSMEEGGeyiystdsvnfegteeekakVNIENSTTAEGFVADERGHVTGLkvvsvapgengpftR 404
Cdd:PRK06370 212 -----EDVAAAVRE--ILEREG--------------------IDVRLNAECIRVERDGDGIAVGL--------------D 250
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 489925947 405 QPGTERVLPADLVLISVGfLHPDTETI-LEQMPVELDKRGNIARNDKFATSQDGVFVCGDA-GRGQ 468
Cdd:PRK06370 251 CNGGAPEITGSHILVAVG-RVPNTDDLgLEAAGVETDARGYIKVDDQLRTTNPGIYAAGDCnGRGA 315
|
|
| UbiH |
COG0654 |
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme ... |
148-260 |
4.39e-08 |
|
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme transport and metabolism, Energy production and conversion]; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases is part of the Pathway/BioSystem: Ubiquinone biosynthesis
Pssm-ID: 440419 [Multi-domain] Cd Length: 326 Bit Score: 54.94 E-value: 4.39e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 148 VAVVGSGPAGLAAAQQLTRAGHTVVVYEKDDAIGGLMR------------------------------------------ 185
Cdd:COG0654 6 VLIVGGGPAGLALALALARAGIRVTVVERAPPPRPDGRgialsprslellrrlglwdrllargapirgirvrdgsdgrvl 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 186 -------------YGIPNFKLEKGLLDRrvkqMEAEGTRFRTNVEIgKDITWDD------LRD----RYDAVVVA--IGS 240
Cdd:COG0654 86 arfdaaetglpagLVVPRADLERALLEA----ARALGVELRFGTEV-TGLEQDAdgvtvtLADgrtlRADLVVGAdgARS 160
|
170 180
....*....|....*....|
gi 489925947 241 RVPRDMKIPGRELDGIHFAL 260
Cdd:COG0654 161 AVRRLLGIGFTGRDYPQRAL 180
|
|
| Amino_oxidase |
pfam01593 |
Flavin containing amine oxidoreductase; This family consists of various amine oxidases, ... |
156-196 |
8.05e-08 |
|
Flavin containing amine oxidoreductase; This family consists of various amine oxidases, including maze polyamine oxidase (PAO)and various flavin containing monoamine oxidases (MAO). The aligned region includes the flavin binding site of these enzymes. The family also contains phytoene dehydrogenases and related enzymes. In vertebrates MAO plays an important role regulating the intracellular levels of amines via there oxidation; these include various neurotransmitters, neurotoxins and trace amines. In lower eukaryotes such as aspergillus and in bacteria the main role of amine oxidases is to provide a source of ammonium. PAOs in plants, bacteria and protozoa oxidase spermidine and spermine to an aminobutyral, diaminopropane and hydrogen peroxide and are involved in the catabolism of polyamines. Other members of this family include tryptophan 2-monooxygenase, putrescine oxidase, corticosteroid binding proteins and antibacterial glycoproteins.
Pssm-ID: 396255 [Multi-domain] Cd Length: 446 Bit Score: 54.42 E-value: 8.05e-08
10 20 30 40
....*....|....*....|....*....|....*....|..
gi 489925947 156 AGLAAAQQLTRAGHTVVVYEKDDAIGGLMR-YGIPNFKLEKG 196
Cdd:pfam01593 2 AGLAAARELLRAGHDVTVLEARDRVGGRIRtVRDDGFLIELG 43
|
|
| PRK05249 |
PRK05249 |
Si-specific NAD(P)(+) transhydrogenase; |
150-484 |
2.36e-07 |
|
Si-specific NAD(P)(+) transhydrogenase;
Pssm-ID: 235373 [Multi-domain] Cd Length: 461 Bit Score: 53.24 E-value: 2.36e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 150 VVGSGPAGLAAAQQLTRAGHTVVVYEKDDAIGG--LMRYGIPNfkleKGLldRR-VKQMeaegTRFRTN---VEIG--KD 221
Cdd:PRK05249 10 VIGSGPAGEGAAMQAAKLGKRVAVIERYRNVGGgcTHTGTIPS----KAL--REaVLRL----IGFNQNplySSYRvkLR 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 222 ITWDDLRDRYDAVVvaigsrvprdmkipGRELDGI-HFaldFLPDATRRIFGvkpvhdiTAK--DKHVVIIGGGDTGSDC 298
Cdd:PRK05249 80 ITFADLLARADHVI--------------NKQVEVRrGQ---YERNRVDLIQG-------RARfvDPHTVEVECPDGEVET 135
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 299 LGTS---IRQGAKdvtvlqimpkepTSRPDNSPWpTFARTYQKTS--SMEE-------------GGEY--IYSTDSVnfe 358
Cdd:PRK05249 136 LTADkivIATGSR------------PYRPPDVDF-DHPRIYDSDSilSLDHlprsliiygagviGCEYasIFAALGV--- 199
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 359 gteeekaKVN-IENSTTAEGFVADE-----------RGhVT---GLKVVSVAPGENGPFTR-QPGteRVLPADLVLISVG 422
Cdd:PRK05249 200 -------KVTlINTRDRLLSFLDDEisdalsyhlrdSG-VTirhNEEVEKVEGGDDGVIVHlKSG--KKIKADCLLYANG 269
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 489925947 423 fLHPDTETI-LEQMPVELDKRGNIARNDKFATSQDGVFVCGDAGRGQSLVVWAIAEGRSCASA 484
Cdd:PRK05249 270 -RTGNTDGLnLENAGLEADSRGQLKVNENYQTAVPHIYAVGDVIGFPSLASASMDQGRIAAQH 331
|
|
| PRK06416 |
PRK06416 |
dihydrolipoamide dehydrogenase; Reviewed |
148-488 |
5.09e-07 |
|
dihydrolipoamide dehydrogenase; Reviewed
Pssm-ID: 235798 [Multi-domain] Cd Length: 462 Bit Score: 52.07 E-value: 5.09e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 148 VAVVGSGPAGLAAAQQLTRAGHTVVVYEKDDaIGG------------LMR-------------YGI----PNFKLEK--- 195
Cdd:PRK06416 7 VIVIGAGPGGYVAAIRAAQLGLKVAIVEKEK-LGGtclnrgcipskaLLHaaeradearhsedFGIkaenVGIDFKKvqe 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 196 --------------GLLDRR-VKQMEAEGtRFRTNVEIgkDITWDDLRDRYDA--VVVAIGSRvPRdmKIPGRELDG-IH 257
Cdd:PRK06416 86 wkngvvnrltggveGLLKKNkVDIIRGEA-KLVDPNTV--RVMTEDGEQTYTAknIILATGSR-PR--ELPGIEIDGrVI 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 258 F------ALDFLPdatrrifgvkpvhditakdKHVVIIGGGDTGSD------CLGTsirqgakDVTVL----QIMPKEpt 321
Cdd:PRK06416 160 WtsdealNLDEVP-------------------KSLVVIGGGYIGVEfasayaSLGA-------EVTIVealpRILPGE-- 211
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 322 srpDnspwPTFARTYQKtssmeeggeyiystdsvNFegteeEKAKVNIENSTTAEGFVADERGhVTglkvVSVAPGengp 401
Cdd:PRK06416 212 ---D----KEISKLAER-----------------AL-----KKRGIKIKTGAKAKKVEQTDDG-VT----VTLEDG---- 253
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 402 ftrqpGTERVLPADLVLISVGfLHPDTETI-LEQMPVELDkRGNIARNDKFATSQDGVFVCGDAGRGQSLVVWAIAEGRS 480
Cdd:PRK06416 254 -----GKEETLEADYVLVAVG-RRPNTENLgLEELGVKTD-RGFIEVDEQLRTNVPNIYAIGDIVGGPMLAHKASAEGII 326
|
410
....*....|....*
gi 489925947 481 CA-------SAVDEY 488
Cdd:PRK06416 327 AAeaiagnpHPIDYR 341
|
|
| Ppro0129 |
COG2907 |
Predicted flavin-containing amine oxidase [General function prediction only]; |
146-182 |
6.30e-07 |
|
Predicted flavin-containing amine oxidase [General function prediction only];
Pssm-ID: 442151 [Multi-domain] Cd Length: 423 Bit Score: 51.66 E-value: 6.30e-07
10 20 30
....*....|....*....|....*....|....*..
gi 489925947 146 QTVAVVGSGPAGLAAAQQLTRAgHTVVVYEKDDAIGG 182
Cdd:COG2907 4 MRIAVIGSGISGLTAAWLLSRR-HDVTLFEANDRLGG 39
|
|
| crtI_fam |
TIGR02734 |
phytoene desaturase; Phytoene is converted to lycopene by desaturation at four (two ... |
148-182 |
2.30e-06 |
|
phytoene desaturase; Phytoene is converted to lycopene by desaturation at four (two symmetrical pairs of) sites. This is achieved by two enzymes (crtP and crtQ) in cyanobacteria (Gloeobacter being an exception) and plants, but by a single enzyme in most other bacteria and in fungi. This single enzyme is called the bacterial-type phytoene desaturase, or CrtI. Most members of this family, part of the larger pfam01593, which also contains amino oxidases, are CrtI itself; it is likely that all members act on either phytoene or on related compounds such as dehydrosqualene, for carotenoid biosynthesis. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other]
Pssm-ID: 274273 [Multi-domain] Cd Length: 495 Bit Score: 49.97 E-value: 2.30e-06
10 20 30
....*....|....*....|....*....|....*
gi 489925947 148 VAVVGSGPAGLAAAQQLTRAGHTVVVYEKDDAIGG 182
Cdd:TIGR02734 1 AVVIGAGFGGLALAIRLAAAGIPVTVVEQRDKPGG 35
|
|
| COG3349 |
COG3349 |
Uncharacterized protein, contains NAD-binding domain and a Fe-S cluster [General function ... |
146-185 |
2.51e-06 |
|
Uncharacterized protein, contains NAD-binding domain and a Fe-S cluster [General function prediction only];
Pssm-ID: 442577 [Multi-domain] Cd Length: 445 Bit Score: 49.85 E-value: 2.51e-06
10 20 30 40
....*....|....*....|....*....|....*....|
gi 489925947 146 QTVAVVGSGPAGLAAAQQLTRAGHTVVVYEKDDAIGGLMR 185
Cdd:COG3349 4 PRVVVVGGGLAGLAAAVELAEAGFRVTLLEARPRLGGRAR 43
|
|
| DadA |
COG0665 |
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism]; |
148-182 |
4.04e-06 |
|
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];
Pssm-ID: 440429 [Multi-domain] Cd Length: 364 Bit Score: 49.13 E-value: 4.04e-06
10 20 30
....*....|....*....|....*....|....*
gi 489925947 148 VAVVGSGPAGLAAAQQLTRAGHTVVVYEKDDAIGG 182
Cdd:COG0665 5 VVVIGGGIAGLSTAYHLARRGLDVTVLERGRPGSG 39
|
|
| FAD_oxidored |
pfam12831 |
FAD dependent oxidoreductase; This family of proteins contains FAD dependent oxidoreductases ... |
148-184 |
4.43e-06 |
|
FAD dependent oxidoreductase; This family of proteins contains FAD dependent oxidoreductases and related proteins.
Pssm-ID: 432816 [Multi-domain] Cd Length: 420 Bit Score: 49.14 E-value: 4.43e-06
10 20 30
....*....|....*....|....*....|....*..
gi 489925947 148 VAVVGSGPAGLAAAQQLTRAGHTVVVYEKDDAIGGLM 184
Cdd:pfam12831 2 VVVVGGGPAGVAAAIAAARAGAKVLLVERRGFLGGML 38
|
|
| DAO |
pfam01266 |
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: ... |
148-182 |
4.99e-06 |
|
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase EC:1.1.99.5, Sarcosine oxidase beta subunit EC:1.5.3.1, D-alanine oxidase EC:1.4.99.1, D-aspartate oxidase EC:1.4.3.1.
Pssm-ID: 426168 [Multi-domain] Cd Length: 339 Bit Score: 48.55 E-value: 4.99e-06
10 20 30
....*....|....*....|....*....|....*
gi 489925947 148 VAVVGSGPAGLAAAQQLTRAGHTVVVYEKDDAIGG 182
Cdd:pfam01266 2 VVVIGGGIVGLSTAYELARRGLSVTLLERGDDPGS 36
|
|
| FadH2 |
COG0446 |
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase ... |
146-241 |
1.41e-05 |
|
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase [Lipid transport and metabolism];
Pssm-ID: 440215 [Multi-domain] Cd Length: 322 Bit Score: 47.11 E-value: 1.41e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 146 QTVAVVGSGPAGLAAAQQLTRAGHTVVVYEKDDAIggLMRYGipnfkleKGLLDRRVKQMEAEGTRFRTNVEI----GKD 221
Cdd:COG0446 125 KRAVVIGGGPIGLELAEALRKRGLKVTLVERAPRL--LGVLD-------PEMAALLEEELREHGVELRLGETVvaidGDD 195
|
90 100
....*....|....*....|....
gi 489925947 222 ---ITWDDLRD-RYDAVVVAIGSR 241
Cdd:COG0446 196 kvaVTLTDGEEiPADLVVVAPGVR 219
|
|
| PRK15317 |
PRK15317 |
alkyl hydroperoxide reductase subunit F; Provisional |
148-464 |
1.67e-05 |
|
alkyl hydroperoxide reductase subunit F; Provisional
Pssm-ID: 237942 [Multi-domain] Cd Length: 517 Bit Score: 47.46 E-value: 1.67e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 148 VAVVGSGPAGLAAAQQLTRAG-HTVVVYEKddaIGG--LMRYGIPNF-------------KLEKGLLDRRVKQMEAEgtr 211
Cdd:PRK15317 214 VLVVGGGPAGAAAAIYAARKGiRTGIVAER---FGGqvLDTMGIENFisvpetegpklaaALEEHVKEYDVDIMNLQ--- 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 212 fR-TNVEIGKDITWDDLRD----RYDAVVVAIGSRVpRDMKIPGRE------------LDGIHFaldflpdatrrifgvk 274
Cdd:PRK15317 288 -RaSKLEPAAGLIEVELANgavlKAKTVILATGARW-RNMNVPGEDeyrnkgvaycphCDGPLF---------------- 349
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 275 pvhditaKDKHVVIIGGGDTGS----DCLGTsirqgAKDVTVLQIMPKeptSRPDNspwptfarTYQKTssmeeggeyIY 350
Cdd:PRK15317 350 -------KGKRVAVIGGGNSGVeaaiDLAGI-----VKHVTVLEFAPE---LKADQ--------VLQDK---------LR 397
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 351 STDSVNFegteeekakvnIENSTTAEgfVADERGHVTGLKVVSvapgengpftRQPGTERVLPADLVLISVGfLHPDTET 430
Cdd:PRK15317 398 SLPNVTI-----------ITNAQTTE--VTGDGDKVTGLTYKD----------RTTGEEHHLELEGVFVQIG-LVPNTEW 453
|
330 340 350
....*....|....*....|....*....|....
gi 489925947 431 ILEQmpVELDKRGNIARNDKFATSQDGVFVCGDA 464
Cdd:PRK15317 454 LKGT--VELNRRGEIIVDARGATSVPGVFAAGDC 485
|
|
| Pyr_redox_2 |
pfam07992 |
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ... |
141-245 |
1.73e-05 |
|
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.
Pssm-ID: 400379 [Multi-domain] Cd Length: 301 Bit Score: 46.54 E-value: 1.73e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 141 QRLTDQTVAVVGSGPAGLAAAQQLTRAGHTVVVYEkddaigglmRYGIPNFKLEKGLLDRRVKQMEAEGTRFRTNVEIgK 220
Cdd:pfam07992 148 LKLLPKRVVVVGGGYIGVELAAALAKLGKEVTLIE---------ALDRLLRAFDEEISAALEKALEKNGVEVRLGTSV-K 217
|
90 100 110
....*....|....*....|....*....|....*
gi 489925947 221 DITWDD----------LRDRYDAVVVAIGsRVPRD 245
Cdd:pfam07992 218 EIIGDGdgvevilkdgTEIDADLVVVAIG-RRPNT 251
|
|
| SdhA |
COG1053 |
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and ... |
148-182 |
2.06e-05 |
|
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion]; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit is part of the Pathway/BioSystem: TCA cycle
Pssm-ID: 440673 [Multi-domain] Cd Length: 443 Bit Score: 46.75 E-value: 2.06e-05
10 20 30
....*....|....*....|....*....|....*
gi 489925947 148 VAVVGSGPAGLAAAQQLTRAGHTVVVYEKDDAIGG 182
Cdd:COG1053 6 VVVVGSGGAGLRAALEAAEAGLKVLVLEKVPPRGG 40
|
|
| PRK06292 |
PRK06292 |
dihydrolipoamide dehydrogenase; Validated |
115-290 |
2.33e-05 |
|
dihydrolipoamide dehydrogenase; Validated
Pssm-ID: 235774 [Multi-domain] Cd Length: 460 Bit Score: 46.71 E-value: 2.33e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 115 PTMIKLDEQTII--DQAWDLDYVkplpPQRLtdqtvAVVGSGPAGLAAAQQLTRAGHTVVVYEKDDAIGGLM-----RYG 187
Cdd:PRK06292 146 PGVWLILGDRLLtsDDAFELDKL----PKSL-----AVIGGGVIGLELGQALSRLGVKVTVFERGDRILPLEdpevsKQA 216
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 188 IPNFKLE-KGLLDRRVKQMEAEGTRFRTNVEI-GKDITWddlrdRYDAVVVAIGsRVPRdmkIPGRELDGIHFALDflpd 265
Cdd:PRK06292 217 QKILSKEfKIKLGAKVTSVEKSGDEKVEELEKgGKTETI-----EADYVLVATG-RRPN---TDGLGLENTGIELD---- 283
|
170 180
....*....|....*....|....*.
gi 489925947 266 atRRifGVKPVHDITAK-DKHVVIIG 290
Cdd:PRK06292 284 --ER--GRPVVDEHTQTsVPGIYAAG 305
|
|
| PRK09564 |
PRK09564 |
coenzyme A disulfide reductase; Reviewed |
148-463 |
2.43e-05 |
|
coenzyme A disulfide reductase; Reviewed
Pssm-ID: 181958 [Multi-domain] Cd Length: 444 Bit Score: 46.57 E-value: 2.43e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 148 VAVVGSGPAGLAAAQQLTR--AGHTVVVYEKDDAIG----GLmRYGIPNFKLEKG-LLDRRVKQMEAEGTRFRTNVEI-- 218
Cdd:PRK09564 3 IIIIGGTAAGMSAAAKAKRlnKELEITVYEKTDIVSfgacGL-PYFVGGFFDDPNtMIARTPEEFIKSGIDVKTEHEVvk 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 219 ----GKDITWDDLR------DRYDAVVVAIGSR--VPrdmKIPGRELDGIhFALDFLPD--ATRRIFGVKpvhditaKDK 284
Cdd:PRK09564 82 vdakNKTITVKNLKtgsifnDTYDKLMIATGARpiIP---PIKNINLENV-YTLKSMEDglALKELLKDE-------EIK 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 285 HVVIIGGGDTGSDCLGTSIRQGaKDVTVLQ----IMPKeptsrpdnspwpTFARtyQKTSSMEEggeyiystdsvnfegt 360
Cdd:PRK09564 151 NIVIIGAGFIGLEAVEAAKHLG-KNVRIIQledrILPD------------SFDK--EITDVMEE---------------- 199
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 361 EEEKAKVNIENSTTAEGFVADERghVTGLKVvsvapgENGPFTrqpgtervlpADLVLISVGFlHPDTEtILEQMPVELD 440
Cdd:PRK09564 200 ELRENGVELHLNEFVKSLIGEDK--VEGVVT------DKGEYE----------ADVVIVATGV-KPNTE-FLEDTGLKTL 259
|
330 340
....*....|....*....|...
gi 489925947 441 KRGNIARNDKFATSQDGVFVCGD 463
Cdd:PRK09564 260 KNGAIIVDEYGETSIENIYAAGD 282
|
|
| PTZ00188 |
PTZ00188 |
adrenodoxin reductase; Provisional |
148-240 |
3.86e-05 |
|
adrenodoxin reductase; Provisional
Pssm-ID: 240308 Cd Length: 506 Bit Score: 46.03 E-value: 3.86e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 148 VAVVGSGPAGLAAAQQLTRAGHTVV-VYEKDDAIGGLMRYGI-PNFKLEKGLLDRRVKQMEAEGTRFRTNVEIGKDITWD 225
Cdd:PTZ00188 42 VGIIGAGPSALYCCKHLLKHERVKVdIFEKLPNPYGLIRYGVaPDHIHVKNTYKTFDPVFLSPNYRFFGNVHVGVDLKME 121
|
90
....*....|....*
gi 489925947 226 DLRDRYDAVVVAIGS 240
Cdd:PTZ00188 122 ELRNHYNCVIFCCGA 136
|
|
| FAD_binding_2 |
pfam00890 |
FAD binding domain; This family includes members that bind FAD. This family includes the ... |
148-182 |
3.93e-05 |
|
FAD binding domain; This family includes members that bind FAD. This family includes the flavoprotein subunits from succinate and fumarate dehydrogenase, aspartate oxidase and the alpha subunit of adenylylsulphate reductase.
Pssm-ID: 395718 [Multi-domain] Cd Length: 398 Bit Score: 46.13 E-value: 3.93e-05
10 20 30
....*....|....*....|....*....|....*
gi 489925947 148 VAVVGSGPAGLAAAQQLTRAGHTVVVYEKDDAIGG 182
Cdd:pfam00890 2 VLVIGGGLAGLAAALAAAEAGLKVAVVEKGQPFGG 36
|
|
| carotene-cycl |
TIGR01790 |
lycopene cyclase family protein; This family includes lycopene beta and epsilion cyclases ... |
148-188 |
7.28e-05 |
|
lycopene cyclase family protein; This family includes lycopene beta and epsilion cyclases (which form beta and delta carotene, respectively) from bacteria and plants as well as the plant capsanthin/capsorubin and neoxanthin cyclases which appear to have evolved from the plant lycopene cyclases. The plant lycopene epsilon cyclases also transform neurosporene to alpha zeacarotene.
Pssm-ID: 130850 [Multi-domain] Cd Length: 388 Bit Score: 45.11 E-value: 7.28e-05
10 20 30 40
....*....|....*....|....*....|....*....|.
gi 489925947 148 VAVVGSGPAGLAAAQQLTRAGHTVVVYEKDDAIGGLMRYGI 188
Cdd:TIGR01790 2 LAVIGGGPAGLAIALELARPGLRVQLIEPHPPIPGNHTYGV 42
|
|
| PRK08132 |
PRK08132 |
FAD-dependent oxidoreductase; Provisional |
148-181 |
1.17e-04 |
|
FAD-dependent oxidoreductase; Provisional
Pssm-ID: 236158 [Multi-domain] Cd Length: 547 Bit Score: 44.86 E-value: 1.17e-04
10 20 30
....*....|....*....|....*....|....
gi 489925947 148 VAVVGSGPAGLAAAQQLTRAGHTVVVYEKDDAIG 181
Cdd:PRK08132 26 VVVVGAGPVGLALAIDLAQQGVPVVLLDDDDTLS 59
|
|
| PLN02976 |
PLN02976 |
amine oxidase |
148-182 |
1.30e-04 |
|
amine oxidase
Pssm-ID: 215527 [Multi-domain] Cd Length: 1713 Bit Score: 44.86 E-value: 1.30e-04
10 20 30
....*....|....*....|....*....|....*
gi 489925947 148 VAVVGSGPAGLAAAQQLTRAGHTVVVYEKDDAIGG 182
Cdd:PLN02976 696 IIVVGAGPAGLTAARHLQRQGFSVTVLEARSRIGG 730
|
|
| PLN02576 |
PLN02576 |
protoporphyrinogen oxidase |
148-182 |
2.70e-04 |
|
protoporphyrinogen oxidase
Pssm-ID: 215314 [Multi-domain] Cd Length: 496 Bit Score: 43.46 E-value: 2.70e-04
10 20 30
....*....|....*....|....*....|....*.
gi 489925947 148 VAVVGSGPAGLAAAQQL-TRAGHTVVVYEKDDAIGG 182
Cdd:PLN02576 15 VAVVGAGVSGLAAAYALaSKHGVNVLVTEARDRVGG 50
|
|
| HI0933_like |
pfam03486 |
HI0933-like protein; |
148-181 |
2.96e-04 |
|
HI0933-like protein;
Pssm-ID: 427330 [Multi-domain] Cd Length: 406 Bit Score: 43.34 E-value: 2.96e-04
10 20 30
....*....|....*....|....*....|....
gi 489925947 148 VAVVGSGPAGLAAAQQLTRAGHTVVVYEKDDAIG 181
Cdd:pfam03486 3 VIVIGGGAAGLMAAISAAKRGRRVLLIEKGKKLG 36
|
|
| mhpA |
PRK06183 |
bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase; |
137-185 |
3.33e-04 |
|
bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase;
Pssm-ID: 235727 [Multi-domain] Cd Length: 500 Bit Score: 43.36 E-value: 3.33e-04
10 20 30 40
....*....|....*....|....*....|....*....|....*....
gi 489925947 137 PLPPQRLTDqtVAVVGSGPAGLAAAQQLTRAGHTVVVYEKDDAIGGLMR 185
Cdd:PRK06183 4 QHPDAHDTD--VVIVGAGPVGLTLANLLGQYGVRVLVLERWPTLYDLPR 50
|
|
| FAD_binding_3 |
pfam01494 |
FAD binding domain; This domain is involved in FAD binding in a number of enzymes. |
145-263 |
3.47e-04 |
|
FAD binding domain; This domain is involved in FAD binding in a number of enzymes.
Pssm-ID: 396193 [Multi-domain] Cd Length: 348 Bit Score: 42.70 E-value: 3.47e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 145 DQTVAVVGSGPAGLAAAQQLTRAGHTVVVYEKDDAIGGLMRYGIPN---FKL--EKGLLDRrvkqMEAEGT---RFRTNV 216
Cdd:pfam01494 1 ETDVLIVGGGPAGLMLALLLARAGVRVVLVERHATTSVLPRAHGLNqrtMELlrQAGLEDR----ILAEGVpheGMGLAF 76
|
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 489925947 217 EIGKDITWDDLRDRYDAVVVAIGSRVPRDMkIPGRELDG--IHFALDFL 263
Cdd:pfam01494 77 YNTRRRADLDFLTSPPRVTVYPQTELEPIL-VEHAEARGaqVRFGTEVL 124
|
|
| FixC |
COG0644 |
Dehydrogenase (flavoprotein) [Energy production and conversion]; |
154-181 |
4.08e-04 |
|
Dehydrogenase (flavoprotein) [Energy production and conversion];
Pssm-ID: 440409 [Multi-domain] Cd Length: 281 Bit Score: 42.26 E-value: 4.08e-04
10 20
....*....|....*....|....*...
gi 489925947 154 GPAGLAAAQQLTRAGHTVVVYEKDDAIG 181
Cdd:COG0644 2 GPAGSAAARRLARAGLSVLLLEKGSFPG 29
|
|
| PLN00093 |
PLN00093 |
geranylgeranyl diphosphate reductase; Provisional |
148-205 |
4.95e-04 |
|
geranylgeranyl diphosphate reductase; Provisional
Pssm-ID: 177713 [Multi-domain] Cd Length: 450 Bit Score: 42.43 E-value: 4.95e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 489925947 148 VAVVGSGPAGLAAAQQLTRAGHTVVVYEK--DDA--IGGlmryGIP-----NFKLEKGLLDRRVKQM 205
Cdd:PLN00093 42 VAVIGGGPAGACAAETLAKGGIETFLIERklDNAkpCGG----AIPlcmvgEFDLPLDIIDRKVTKM 104
|
|
| COG3573 |
COG3573 |
Predicted oxidoreductase [General function prediction only]; |
148-183 |
5.21e-04 |
|
Predicted oxidoreductase [General function prediction only];
Pssm-ID: 442794 [Multi-domain] Cd Length: 551 Bit Score: 42.47 E-value: 5.21e-04
10 20 30
....*....|....*....|....*....|....*...
gi 489925947 148 VAVVGSGPAGLAAAQQLTRAGHTVVVYEKD--DAIGGL 183
Cdd:COG3573 8 VIVVGAGLAGLVAAAELADAGRRVLLLDQEpeANLGGQ 45
|
|
| PLN02268 |
PLN02268 |
probable polyamine oxidase |
147-182 |
5.64e-04 |
|
probable polyamine oxidase
Pssm-ID: 177909 [Multi-domain] Cd Length: 435 Bit Score: 42.37 E-value: 5.64e-04
10 20 30
....*....|....*....|....*....|....*.
gi 489925947 147 TVAVVGSGPAGLAAAQQLTRAGHTVVVYEKDDAIGG 182
Cdd:PLN02268 2 SVIVIGGGIAGIAAARALHDASFKVTLLESRDRIGG 37
|
|
| PLN03000 |
PLN03000 |
amine oxidase |
140-182 |
5.76e-04 |
|
amine oxidase
Pssm-ID: 178578 [Multi-domain] Cd Length: 881 Bit Score: 42.70 E-value: 5.76e-04
10 20 30 40
....*....|....*....|....*....|....*....|...
gi 489925947 140 PQRLTDQTVAVVGSGPAGLAAAQQLTRAGHTVVVYEKDDAIGG 182
Cdd:PLN03000 179 PAQSSKSSVVIVGAGLSGLAAARQLMRFGFKVTVLEGRKRPGG 221
|
|
| PRK08163 |
PRK08163 |
3-hydroxybenzoate 6-monooxygenase; |
144-181 |
5.97e-04 |
|
3-hydroxybenzoate 6-monooxygenase;
Pssm-ID: 181262 [Multi-domain] Cd Length: 396 Bit Score: 42.33 E-value: 5.97e-04
10 20 30
....*....|....*....|....*....|....*...
gi 489925947 144 TDQTVAVVGSGPAGLAAAQQLTRAGHTVVVYEKDDAIG 181
Cdd:PRK08163 3 KVTPVLIVGGGIGGLAAALALARQGIKVKLLEQAAEIG 40
|
|
| PLN02529 |
PLN02529 |
lysine-specific histone demethylase 1 |
140-182 |
8.31e-04 |
|
lysine-specific histone demethylase 1
Pssm-ID: 178144 [Multi-domain] Cd Length: 738 Bit Score: 42.19 E-value: 8.31e-04
10 20 30 40
....*....|....*....|....*....|....*....|...
gi 489925947 140 PQRLTDQTVAVVGSGPAGLAAAQQLTRAGHTVVVYEKDDAIGG 182
Cdd:PLN02529 155 PEEGTEGSVIIVGAGLAGLAAARQLLSFGFKVVVLEGRNRPGG 197
|
|
| PRK06134 |
PRK06134 |
putative FAD-binding dehydrogenase; Reviewed |
137-182 |
8.41e-04 |
|
putative FAD-binding dehydrogenase; Reviewed
Pssm-ID: 180419 [Multi-domain] Cd Length: 581 Bit Score: 42.01 E-value: 8.41e-04
10 20 30 40
....*....|....*....|....*....|....*....|....*.
gi 489925947 137 PLPPQRLTDQTVAVVGSGPAGLAAAQQLTRAGHTVVVYEKDDAIGG 182
Cdd:PRK06134 4 AAAYPPDLECDVLVIGSGAAGLSAAVTAAWHGLKVIVVEKDPVFGG 49
|
|
| COG4716 |
COG4716 |
Myosin-crossreactive antigen (function unknown) [Function unknown]; |
134-182 |
1.42e-03 |
|
Myosin-crossreactive antigen (function unknown) [Function unknown];
Pssm-ID: 443751 Cd Length: 578 Bit Score: 41.36 E-value: 1.42e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|...
gi 489925947 134 YVKPLPPQRLTDQTVAVVGSGPAGLAAAQQLTR----AGHTVVVYEKDDAIGG 182
Cdd:COG4716 11 FARPRKPEGVDDKSAYLVGSGLASLAAAAFLIRdgqmPGENIHILEELDLPGG 63
|
|
| PRK06753 |
PRK06753 |
hypothetical protein; Provisional |
148-188 |
1.70e-03 |
|
hypothetical protein; Provisional
Pssm-ID: 168661 [Multi-domain] Cd Length: 373 Bit Score: 40.83 E-value: 1.70e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*
gi 489925947 148 VAVVGSGPAGLAAAQQLTRAGHTVVVYEK--------------DDAIGGLMRYGI 188
Cdd:PRK06753 3 IAIIGAGIGGLTAAALLQEQGHEVKVFEKnesvkevgagigigDNVIKKLGNHDL 57
|
|
| mnmC |
PRK01747 |
bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent ... |
140-181 |
2.36e-03 |
|
bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC;
Pssm-ID: 234978 [Multi-domain] Cd Length: 662 Bit Score: 40.60 E-value: 2.36e-03
10 20 30 40
....*....|....*....|....*....|....*....|..
gi 489925947 140 PQRLTDQTVAVVGSGPAGLAAAQQLTRAGHTVVVYEKDDAIG 181
Cdd:PRK01747 255 PGSPKARDAAIIGGGIAGAALALALARRGWQVTLYEADEAPA 296
|
|
| PRK07804 |
PRK07804 |
L-aspartate oxidase; Provisional |
148-186 |
2.56e-03 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236102 [Multi-domain] Cd Length: 541 Bit Score: 40.34 E-value: 2.56e-03
10 20 30
....*....|....*....|....*....|....*....
gi 489925947 148 VAVVGSGPAGLAAAQQLTRAGHTVVVYEKDDAIGGLMRY 186
Cdd:PRK07804 19 VVVVGSGVAGLTAALAARRAGRRVLVVTKAALDDGSTRW 57
|
|
| PRK08243 |
PRK08243 |
4-hydroxybenzoate 3-monooxygenase; Validated |
147-209 |
3.04e-03 |
|
4-hydroxybenzoate 3-monooxygenase; Validated
Pssm-ID: 236198 [Multi-domain] Cd Length: 392 Bit Score: 39.78 E-value: 3.04e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 147 TVAVVGSGPAGLAAAQQLTRAGHTVVVYEK--DDAIGGLMRYGIpnfkLEKGLLD--RRV---KQMEAEG 209
Cdd:PRK08243 4 QVAIIGAGPAGLLLGQLLHLAGIDSVVLERrsREYVEGRIRAGV----LEQGTVDllREAgvgERMDREG 69
|
|
| YdhS |
COG4529 |
Uncharacterized NAD(P)/FAD-binding protein YdhS [General function prediction only]; |
147-306 |
3.22e-03 |
|
Uncharacterized NAD(P)/FAD-binding protein YdhS [General function prediction only];
Pssm-ID: 443597 [Multi-domain] Cd Length: 466 Bit Score: 39.94 E-value: 3.22e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 147 TVAVVGSGPAGLAAAQQLTRAGHT---VVVYEKDDAIG------------------GLM--------------------- 184
Cdd:COG4529 7 RIAIIGGGASGTALAIHLLRRAPEplrITLFEPRPELGrgvaystdspehllnvpaGRMsafpddpdhflrwlrengara 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 185 ----------------RY-----------GIPNFKLEkgLLDRRVKQMEAEGTRFRTNVEIGKDItwddlrdRYDAVVVA 237
Cdd:COG4529 87 apaidpdafvprrlfgEYlrerlaealarAPAGVRLR--HIRAEVVDLERDDGGYRVTLADGETL-------RADAVVLA 157
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 489925947 238 IGSRVPRDmkIPGRELDGIHFALDflPDATRRIFGVKPvhditakDKHVVIIGGGDTGSDCLGTSIRQG 306
Cdd:COG4529 158 TGHPPPAP--PPGLAAGSPRYIAD--PWPPGALARIPP-------DARVLIIGTGLTAIDVVLSLAARG 215
|
|
| PLN02463 |
PLN02463 |
lycopene beta cyclase |
148-173 |
3.34e-03 |
|
lycopene beta cyclase
Pssm-ID: 178082 [Multi-domain] Cd Length: 447 Bit Score: 40.08 E-value: 3.34e-03
10 20
....*....|....*....|....*.
gi 489925947 148 VAVVGSGPAGLAAAQQLTRAGHTVVV 173
Cdd:PLN02463 31 LVVVGGGPAGLAVAQQVSEAGLSVCC 56
|
|
| PRK11883 |
PRK11883 |
protoporphyrinogen oxidase; Reviewed |
147-196 |
4.09e-03 |
|
protoporphyrinogen oxidase; Reviewed
Pssm-ID: 237009 [Multi-domain] Cd Length: 451 Bit Score: 39.45 E-value: 4.09e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|...
gi 489925947 147 TVAVVGSGPAGLAAAQQLTRAG--HTVVVYEKDDAIGGLMR-YGIPNFKLEKG 196
Cdd:PRK11883 2 KVAIIGGGITGLSAAYRLHKKGpdADITLLEASDRLGGKIQtVRKDGFPIELG 54
|
|
| PLN02487 |
PLN02487 |
zeta-carotene desaturase |
148-182 |
4.60e-03 |
|
zeta-carotene desaturase
Pssm-ID: 215268 [Multi-domain] Cd Length: 569 Bit Score: 39.78 E-value: 4.60e-03
10 20 30
....*....|....*....|....*....|....*
gi 489925947 148 VAVVGSGPAGLAAAQQLTRAGHTVVVYEKDDAIGG 182
Cdd:PLN02487 78 VAIIGAGLAGMSTAVELLDQGHEVDIYESRPFIGG 112
|
|
| PRK12771 |
PRK12771 |
putative glutamate synthase (NADPH) small subunit; Provisional |
4-61 |
4.91e-03 |
|
putative glutamate synthase (NADPH) small subunit; Provisional
Pssm-ID: 237198 [Multi-domain] Cd Length: 564 Bit Score: 39.47 E-value: 4.91e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 489925947 4 PRGFLKVRT---RRELAERPVEERIKDWFDVhaesgVQPWTQEQA----ARCMDCGTPF----CMTGCP 61
Cdd:PRK12771 460 DKLNLWYFTdapRAQRPELDADERVGDFDEV-----LGGLTEEEArqeaARCLSCGNCFecdnCYGACP 523
|
|
| PRK13512 |
PRK13512 |
coenzyme A disulfide reductase; Provisional |
415-464 |
5.26e-03 |
|
coenzyme A disulfide reductase; Provisional
Pssm-ID: 184103 [Multi-domain] Cd Length: 438 Bit Score: 39.38 E-value: 5.26e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|
gi 489925947 415 DLVLISVGfLHPDTETIlEQMPVELDKRGNIARNDKFATSQDGVFVCGDA 464
Cdd:PRK13512 231 DMIIEGVG-THPNSKFI-ESSNIKLDDKGFIPVNDKFETNVPNIYAIGDI 278
|
|
| PRK06370 |
PRK06370 |
FAD-containing oxidoreductase; |
130-243 |
5.40e-03 |
|
FAD-containing oxidoreductase;
Pssm-ID: 235787 [Multi-domain] Cd Length: 463 Bit Score: 39.42 E-value: 5.40e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 130 WDLDYVkplpPQRLtdqtvAVVGSGPAGLAAAQQLTRAGHTVVVYEKDDAIgglmrygIPNFklekgllDRRVKQ----- 204
Cdd:PRK06370 165 FSLDEL----PEHL-----VIIGGGYIGLEFAQMFRRFGSEVTVIERGPRL-------LPRE-------DEDVAAavrei 221
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 489925947 205 MEAEGTRFRTNVEI--------GKDITWDDLRDRY----DAVVVAIGsRVP 243
Cdd:PRK06370 222 LEREGIDVRLNAECirverdgdGIAVGLDCNGGAPeitgSHILVAVG-RVP 271
|
|
| GG-red-SF |
TIGR02032 |
geranylgeranyl reductase family; This model represents a subfamily which includes ... |
148-181 |
5.52e-03 |
|
geranylgeranyl reductase family; This model represents a subfamily which includes geranylgeranyl reductases involved in chlorophyll and bacteriochlorophyll biosynthesis as well as other related enzymes which may also act on geranylgeranyl groups or related substrates. [Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll]
Pssm-ID: 273936 [Multi-domain] Cd Length: 295 Bit Score: 38.84 E-value: 5.52e-03
10 20 30
....*....|....*....|....*....|....
gi 489925947 148 VAVVGSGPAGLAAAQQLTRAGHTVVVYEKDDAIG 181
Cdd:TIGR02032 3 VVVVGAGPAGASAAYRLADKGLRVLLLEKKSFPR 36
|
|
| FadB |
COG1250 |
3-hydroxyacyl-CoA dehydrogenase [Lipid transport and metabolism]; 3-hydroxyacyl-CoA ... |
146-248 |
6.05e-03 |
|
3-hydroxyacyl-CoA dehydrogenase [Lipid transport and metabolism]; 3-hydroxyacyl-CoA dehydrogenase is part of the Pathway/BioSystem: Fatty acid biosynthesis
Pssm-ID: 440862 [Multi-domain] Cd Length: 281 Bit Score: 38.55 E-value: 6.05e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 146 QTVAVVGSGPAGLAAAQQLTRAGHTVVVYEKDDAigglmrygipnfKLEKGL------LDRRVKQ---MEAEGTRFRTNV 216
Cdd:COG1250 3 KKVAVIGAGTMGAGIAAVFANAGYEVVLLDISPE------------ALERARariaklLDKLVKKgklTEEEADAALARI 70
|
90 100 110
....*....|....*....|....*....|..
gi 489925947 217 EIGKDItwDDLRDRyDAVVVAigsrVPRDMKI 248
Cdd:COG1250 71 TPTTDL--AALADA-DLVIEA----VPEDLDL 95
|
|
| TrkA |
COG0569 |
Trk/Ktr K+ transport system regulatory component TrkA/KtrA/KtrC, RCK domain [Inorganic ion ... |
148-240 |
6.65e-03 |
|
Trk/Ktr K+ transport system regulatory component TrkA/KtrA/KtrC, RCK domain [Inorganic ion transport and metabolism, Signal transduction mechanisms];
Pssm-ID: 440335 [Multi-domain] Cd Length: 296 Bit Score: 38.51 E-value: 6.65e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 148 VAVVGSGPAGLAAAQQLTRAGHTVVVYEKDDAigglmrygipnfKLEKgLLDRRVKQMEAEGTRFRTNVEIGkdItwddl 227
Cdd:COG0569 98 VIIIGAGRVGRSLARELEEEGHDVVVIDKDPE------------RVER-LAEEDVLVIVGDATDEEVLEEAG--I----- 157
|
90
....*....|...
gi 489925947 228 rDRYDAVVVAIGS 240
Cdd:COG0569 158 -EDADAVIAATGD 169
|
|
| 3HCDH_N |
pfam02737 |
3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; This family also includes lambda ... |
147-248 |
6.94e-03 |
|
3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; This family also includes lambda crystallin.
Pssm-ID: 397037 [Multi-domain] Cd Length: 180 Bit Score: 37.52 E-value: 6.94e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925947 147 TVAVVGSGPAGLAAAQQLTRAGHTVVVYEKDDAIgglmrygipnfkLEKGL------LDRRVKQ---MEAEGTRFRTNVE 217
Cdd:pfam02737 1 KVAVIGAGTMGAGIAQVFALAGLEVVLVDISEEA------------LEKALeriessLERLVEKgriTEEEVDAALARIS 68
|
90 100 110
....*....|....*....|....*....|.
gi 489925947 218 IGKDItwDDLRDRyDAVVVAigsrVPRDMKI 248
Cdd:pfam02737 69 FTTDL--AAAVDA-DLVIEA----VPENLEL 92
|
|
| PRK07494 |
PRK07494 |
UbiH/UbiF family hydroxylase; |
148-173 |
7.73e-03 |
|
UbiH/UbiF family hydroxylase;
Pssm-ID: 181001 [Multi-domain] Cd Length: 388 Bit Score: 38.73 E-value: 7.73e-03
10 20
....*....|....*....|....*.
gi 489925947 148 VAVVGSGPAGLAAAQQLTRAGHTVVV 173
Cdd:PRK07494 10 IAVIGGGPAGLAAAIALARAGASVAL 35
|
|
| PRK06185 |
PRK06185 |
FAD-dependent oxidoreductase; |
147-176 |
9.30e-03 |
|
FAD-dependent oxidoreductase;
Pssm-ID: 235729 [Multi-domain] Cd Length: 407 Bit Score: 38.30 E-value: 9.30e-03
10 20 30
....*....|....*....|....*....|
gi 489925947 147 TVAVVGSGPAGLAAAQQLTRAGHTVVVYEK 176
Cdd:PRK06185 8 DCCIVGGGPAGMMLGLLLARAGVDVTVLEK 37
|
|
| |
