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Conserved domains on  [gi|489925976|ref|WP_003829315|]
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MULTISPECIES: dihydroorotase [Bifidobacterium]

Protein Classification

dihydroorotase( domain architecture ID 10101434)

dihydroorotase catalyzes the reversible interconversion of carbamoyl aspartate to dihydroorotate, a key reaction in pyrimidine biosynthesis

EC:  3.5.2.3
Gene Ontology:  GO:0004151|GO:0008270|GO:0006221
PubMed:  9144792
SCOP:  4002199|4002171

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
DHOase_IIa cd01317
Dihydroorotase (DHOase), subgroup IIa; DHOases catalyze the reversible interconversion of ...
37-493 5.66e-149

Dihydroorotase (DHOase), subgroup IIa; DHOases catalyze the reversible interconversion of carbamoyl aspartate to dihydroorotate, a key reaction in pyrimidine biosynthesis. This subgroup also contains proteins that lack the active site, like unc-33, a C.elegans protein involved in axon growth.


:

Pssm-ID: 238642 [Multi-domain]  Cd Length: 374  Bit Score: 430.89  E-value: 5.66e-149
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976  37 DGADIDATGLTLAPGFEDPHVHFRDPGQTYKESMVSGCRASASGGYTNVLIMPNTLPALDGqtvtdasapgakevldagf 116
Cdd:cd01317    1 DAEVIDAEGKILAPGLVDLHVHLREPGFEYKETLESGAKAAAAGGFTTVVCMPNTNPVIDN------------------- 61
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 117 DNVIDFLQQYdaAHNVkLPVRYDLCVCASKDRAGHEASDVADWLKY-VPGFEDDAKTpamlahpvtavsddgsAVTPKIL 195
Cdd:cd01317   62 PAVVELLKNR--AKDV-GIVRVLPIGALTKGLKGEELTEIGELLEAgAVGFSDDGKP----------------IQDAELL 122
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 196 DQVLENVKTSDLYLIEHCEHHD---TGAVNEGPVSRELGVPGIPEDTELKIVARDIEAARRTGVHVHFQHVSTAISFEAI 272
Cdd:cd01317  123 RRALEYAAMLDLPIIVHPEDPSlagGGVMNEGKVASRLGLPGIPPEAETIMVARDLELAEATGARVHFQHLSTARSLELI 202
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 273 RKAKAEGLPITCETAPHYLALSDEALLKYGTLAKMNPPLRSEADRKATIAAIADGTVDLLATDHAPHTLEEKELGFLEAP 352
Cdd:cd01317  203 RKAKAKGLPVTAEVTPHHLLLDDEALESYDTNAKVNPPLRSEEDREALIEALKDGTIDAIASDHAPHTDEEKDLPFAEAP 282
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 353 NGIIGLECAYGVCHKVLVDGGFISDERLIELMSVGPAELMGHaptdvaalvedyaepaptgedPDGVIageqvadaaESG 432
Cdd:cd01317  283 PGIIGLETALPLLWTLLVKGGLLTLPDLIRALSTNPAKILGL---------------------PPGRL---------EVG 332
                        410       420       430       440       450       460
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 489925976 433 ASQregvnrlldfshvddadavDLVVLDTAEEWTVDPEQFHSKARNTPFGGWQVTGRPLAT 493
Cdd:cd01317  333 APA-------------------DLVLFDPDAEWIVDEETFRSKSKNTPFDGQKLKGRVLAT 374
AdeC super family cl43302
Adenine deaminase [Nucleotide transport and metabolism];
5-59 3.61e-03

Adenine deaminase [Nucleotide transport and metabolism];


The actual alignment was detected with superfamily member COG1001:

Pssm-ID: 440625 [Multi-domain]  Cd Length: 559  Bit Score: 40.08  E-value: 3.61e-03
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 489925976   5 LRNIKVWN--TGEII--DLVVpgtAAAYFADTSSVVDGAD--IDATGLTLAPGFEDPHVHF 59
Cdd:COG1001    9 IKNGRLVNvfTGEILegDIAI---AGGRIAGVGDYIGEATevIDAAGRYLVPGFIDGHVHI 66
 
Name Accession Description Interval E-value
DHOase_IIa cd01317
Dihydroorotase (DHOase), subgroup IIa; DHOases catalyze the reversible interconversion of ...
37-493 5.66e-149

Dihydroorotase (DHOase), subgroup IIa; DHOases catalyze the reversible interconversion of carbamoyl aspartate to dihydroorotate, a key reaction in pyrimidine biosynthesis. This subgroup also contains proteins that lack the active site, like unc-33, a C.elegans protein involved in axon growth.


Pssm-ID: 238642 [Multi-domain]  Cd Length: 374  Bit Score: 430.89  E-value: 5.66e-149
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976  37 DGADIDATGLTLAPGFEDPHVHFRDPGQTYKESMVSGCRASASGGYTNVLIMPNTLPALDGqtvtdasapgakevldagf 116
Cdd:cd01317    1 DAEVIDAEGKILAPGLVDLHVHLREPGFEYKETLESGAKAAAAGGFTTVVCMPNTNPVIDN------------------- 61
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 117 DNVIDFLQQYdaAHNVkLPVRYDLCVCASKDRAGHEASDVADWLKY-VPGFEDDAKTpamlahpvtavsddgsAVTPKIL 195
Cdd:cd01317   62 PAVVELLKNR--AKDV-GIVRVLPIGALTKGLKGEELTEIGELLEAgAVGFSDDGKP----------------IQDAELL 122
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 196 DQVLENVKTSDLYLIEHCEHHD---TGAVNEGPVSRELGVPGIPEDTELKIVARDIEAARRTGVHVHFQHVSTAISFEAI 272
Cdd:cd01317  123 RRALEYAAMLDLPIIVHPEDPSlagGGVMNEGKVASRLGLPGIPPEAETIMVARDLELAEATGARVHFQHLSTARSLELI 202
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 273 RKAKAEGLPITCETAPHYLALSDEALLKYGTLAKMNPPLRSEADRKATIAAIADGTVDLLATDHAPHTLEEKELGFLEAP 352
Cdd:cd01317  203 RKAKAKGLPVTAEVTPHHLLLDDEALESYDTNAKVNPPLRSEEDREALIEALKDGTIDAIASDHAPHTDEEKDLPFAEAP 282
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 353 NGIIGLECAYGVCHKVLVDGGFISDERLIELMSVGPAELMGHaptdvaalvedyaepaptgedPDGVIageqvadaaESG 432
Cdd:cd01317  283 PGIIGLETALPLLWTLLVKGGLLTLPDLIRALSTNPAKILGL---------------------PPGRL---------EVG 332
                        410       420       430       440       450       460
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 489925976 433 ASQregvnrlldfshvddadavDLVVLDTAEEWTVDPEQFHSKARNTPFGGWQVTGRPLAT 493
Cdd:cd01317  333 APA-------------------DLVLFDPDAEWIVDEETFRSKSKNTPFDGQKLKGRVLAT 374
pyrC PRK09357
dihydroorotase; Validated
1-503 1.44e-138

dihydroorotase; Validated


Pssm-ID: 236479 [Multi-domain]  Cd Length: 423  Bit Score: 406.12  E-value: 1.44e-138
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976   1 MSITLRNIKVWN---TGEIIDLVVPGTAAAYFADTSSVVDGADIDATGLTLAPGFEDPHVHFRDPGQTYKESMVSGCRAS 77
Cdd:PRK09357   1 MMILIKNGRVIDpkgLDEVADVLIDDGKIAAIGENIEAEGAEVIDATGLVVAPGLVDLHVHLREPGQEDKETIETGSRAA 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976  78 ASGGYTNVLIMPNTLPALDgqtvtdaSAPGAKEVLDAGFDN-VIDFLQqydaahnvklpvrydlcVCA-SKDRAGHEASD 155
Cdd:PRK09357  81 AAGGFTTVVAMPNTKPVID-------TPEVVEYVLDRAKEAgLVDVLP-----------------VGAiTKGLAGEELTE 136
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 156 VAdwlkyvpgfeddaktpAMLAHPVTAVSDDGSAV-TPKILDQVLENVKTSDLYLIEHCEHHD---TGAVNEGPVSRELG 231
Cdd:PRK09357 137 FG----------------ALKEAGVVAFSDDGIPVqDARLMRRALEYAKALDLLIAQHCEDPSlteGGVMNEGEVSARLG 200
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 232 VPGIPEDTELKIVARDIEAARRTGVHVHFQHVSTAISFEAIRKAKAEGLPITCETAPHYLALSDEALLKYGTLAKMNPPL 311
Cdd:PRK09357 201 LPGIPAVAEEVMIARDVLLAEATGARVHICHVSTAGSVELIRWAKALGIKVTAEVTPHHLLLTDEDLLTYDPNYKVNPPL 280
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 312 RSEADRKATIAAIADGTVDLLATDHAPHTLEEKELGFLEAPNGIIGLECAYGVCHKVLVDGGFISDERLIELMSVGPAEL 391
Cdd:PRK09357 281 RTEEDREALIEGLKDGTIDAIATDHAPHAREEKECEFEAAPFGITGLETALSLLYTTLVKTGLLDLEQLLEKMTINPARI 360
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 392 MGHAPTDVAALvedyaEPAptgedpdgviageqvadaaesgasqregvnrlldfshvddadavDLVVLDTAEEWTVDPEQ 471
Cdd:PRK09357 361 LGLPAGPLAEG-----EPA--------------------------------------------DLVIFDPEAEWTVDGED 391
                        490       500       510
                 ....*....|....*....|....*....|..
gi 489925976 472 FHSKARNTPFGGWQVTGRPLATIIGSKLMFSR 503
Cdd:PRK09357 392 FASKGKNTPFIGMKLKGKVVYTIVDGKIVYQD 423
AllB COG0044
Dihydroorotase or related cyclic amidohydrolase [Nucleotide transport and metabolism]; ...
5-503 4.52e-133

Dihydroorotase or related cyclic amidohydrolase [Nucleotide transport and metabolism]; Dihydroorotase or related cyclic amidohydrolase is part of the Pathway/BioSystem: Pyrimidine biosynthesis


Pssm-ID: 439814 [Multi-domain]  Cd Length: 439  Bit Score: 392.53  E-value: 4.52e-133
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976   5 LRNIKVWNTGEIID---LVVPGTAAAyFADTSSVVDGAD-IDATGLTLAPGFEDPHVHFRDPGQTYKESMVSGCRASASG 80
Cdd:COG0044    2 IKNGRVVDPGGLERadvLIEDGRIAA-IGPDLAAPEAAEvIDATGLLVLPGLIDLHVHLREPGLEHKEDIETGTRAAAAG 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976  81 GYTNVLIMPNTLPALDgqtvtdaSAPGAKEVLDAgfdnvidflqqydAAHnvKLPVRYDLCVCASKDRaGHEASDVADWL 160
Cdd:COG0044   81 GVTTVVDMPNTNPVTD-------TPEALEFKLAR-------------AEE--KALVDVGPHGALTKGL-GENLAELGALA 137
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 161 KY-VPGFEddaktpamlahpVTAVSDDGSAV-TPKILDQVLENVKTSDLYLIEHCEHHDT---GAVNEGPVSRELGVPGI 235
Cdd:COG0044  138 EAgAVAFK------------VFMGSDDGNPVlDDGLLRRALEYAAEFGALVAVHAEDPDLirgGVMNEGKTSPRLGLKGR 205
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 236 PEDTELKIVARDIEAARRTGVHVHFQHVSTAISFEAIRKAKAEGLPITCETAPHYLALSDEALLKYGTLAKMNPPLRSEA 315
Cdd:COG0044  206 PAEAEEEAVARDIALAEETGARLHIVHVSTAEAVELIREAKARGLPVTAEVCPHHLTLTDEDLERYGTNFKVNPPLRTEE 285
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 316 DRKATIAAIADGTVDLLATDHAPHTLEEKELGFLEAPNGIIGLECAYGVCHKVLVDGGFISDERLIELMSVGPAELMGHA 395
Cdd:COG0044  286 DREALWEGLADGTIDVIATDHAPHTLEEKELPFAEAPNGIPGLETALPLLLTELVHKGRLSLERLVELLSTNPARIFGLP 365
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 396 PTdvaalvedyaepaptgedpdGVIAgeqvadaaesgasqrEGvnrlldfshvddADAvDLVVLDTAEEWTVDPEQFHSK 475
Cdd:COG0044  366 RK--------------------GRIA---------------VG------------ADA-DLVLFDPDAEWTVTAEDLHSK 397
                        490       500
                 ....*....|....*....|....*...
gi 489925976 476 ARNTPFGGWQVTGRPLATIIGSKLMFSR 503
Cdd:COG0044  398 SKNTPFEGRELTGRVVATIVRGRVVYED 425
pyrC_multi TIGR00857
dihydroorotase, multifunctional complex type; In contrast to the homodimeric type of ...
14-499 3.90e-95

dihydroorotase, multifunctional complex type; In contrast to the homodimeric type of dihydroorotase found in E. coli, this class tends to appear in a large, multifunctional complex with aspartate transcarbamoylase. Homologous domains appear in multifunctional proteins of higher eukaryotes. In some species, including Pseudomonas putida and P. aeruginosa, this protein is inactive but is required as a non-catalytic subunit of aspartate transcarbamoylase (ATCase). In these species, a second, active dihydroorotase is also present. The seed for this model does not include any example of the dihydroorotase domain of eukaryotic multidomain pyrimidine synthesis proteins. All proteins described by this model should represent active and inactive dihydroorotase per se and functionally equivalent domains of multifunctional proteins from higher eukaryotes, but exclude related proteins such as allantoinase. [Purines, pyrimidines, nucleosides, and nucleotides, Pyrimidine ribonucleotide biosynthesis]


Pssm-ID: 273302 [Multi-domain]  Cd Length: 411  Bit Score: 294.35  E-value: 3.90e-95
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976   14 GEII--DLVVPGTAAAYFADTSSVVDGADIDATGLTLAPGFEDPHVHFRDPGQTYKESMVSGCRASASGGYTNVLIMPNT 91
Cdd:TIGR00857   1 GKETevDILVEGGRIKKIGKLRIPPDAEVIDAKGLLVLPGFIDLHVHLRDPGEEYKEDIESGSKAAAHGGFTTVADMPNT 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976   92 LPALDGQTVtdasapgakevldagFDNVIDFLQQydaahnvKLPVRYDLCVCASKDRAGHEasdvadwlkyvpgfedDAK 171
Cdd:TIGR00857  81 KPPIDTPET---------------LEWKLQRLKK-------VSLVDVHLYGGVTQGNQGKE----------------LTE 122
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976  172 TPAMLAHPVTAV--SDDGSAV-TPKILDQVLENVKTSDLYLIEHCEHHDT---GAVNEGPVSRELGVPGIPEDTELKIVA 245
Cdd:TIGR00857 123 AYELKEAGAVGRmfTDDGSEVqDILSMRRALEYAAIAGVPIALHAEDPDLiygGVMHEGPSAAQLGLPARPPEAEEVAVA 202
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976  246 RDIEAARRTGVHVHFQHVSTAISFEAIRKAKAEGLPITCETAPHYLALSDEALLKYGTLAKMNPPLRSEADRKATIAAIA 325
Cdd:TIGR00857 203 RLLELAKHAGCPVHICHISTKESLELIVKAKSQGIKITAEVTPHHLLLSEEDVARLDGNGKVNPPLREKEDRLALIEGLK 282
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976  326 DGTVDLLATDHAPHTLEEKELGFLEAPNGIIGLECAYGvCHKVLVDGGFISDERLIELMSVGPAELMGhaptdvaalved 405
Cdd:TIGR00857 283 DGIIDIIATDHAPHTLEEKTKEFAAAPPGIPGLETALP-LLLQLLVKGLISLKDLIRMLSINPARIFG------------ 349
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976  406 yaepaptgedpdgviageqvadaaesgasqregvnrLLDFSHVDDADAVDLVVLDTAEEWTVDPEQFHSKARNTPFGGWQ 485
Cdd:TIGR00857 350 ------------------------------------LPDKGTLEEGNPADITVFDLKKEWTINAETFYSKAKNTPFEGMS 393
                         490
                  ....*....|....
gi 489925976  486 VTGRPLATIIGSKL 499
Cdd:TIGR00857 394 LKGKPIATILRGKV 407
Amidohydro_1 pfam01979
Amidohydrolase family; This family of enzymes are a a large metal dependent hydrolase ...
47-393 5.20e-08

Amidohydrolase family; This family of enzymes are a a large metal dependent hydrolase superfamily. The family includes Adenine deaminase EC:3.5.4.2 that hydrolyses adenine to form hypoxanthine and ammonia. Adenine deaminases reaction is important for adenine utilization as a purine and also as a nitrogen source. This family also includes dihydroorotase and N-acetylglucosamine-6-phosphate deacetylases, EC:3.5.1.25 These enzymes catalyze the reaction N-acetyl-D-glucosamine 6-phosphate + H2O <=> D-glucosamine 6-phosphate + acetate. This family includes the catalytic domain of urease alpha subunit. Dihydroorotases (EC:3.5.2.3) are also included.


Pssm-ID: 460401 [Multi-domain]  Cd Length: 334  Bit Score: 54.82  E-value: 5.20e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976   47 TLAPGFEDPHVHFRD--------PGQTYKESMVSGCRASASGGYTNVLIMPNTlpaldgqtvTDASAPGAKEvldagfdn 118
Cdd:pfam01979   1 IVLPGLIDAHVHLEMgllrgipvPPEFAYEALRLGITTMLKSGTTTVLDMGAT---------TSTGIEALLE-------- 63
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976  119 vidflqqydAAHNVKLPVRYDLCVCaSKDRAGHEASDVADWLKYVPGFE------DDAKTPAMLAHPVTAVSDDGsavtp 192
Cdd:pfam01979  64 ---------AAEELPLGLRFLGPGC-SLDTDGELEGRKALREKLKAGAEfikgmaDGVVFVGLAPHGAPTFSDDE----- 128
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976  193 kiLDQVLENVKTSDLYLIEHCEHHD-TGAVNEGPVSRELGVPGIPEDTELKIVARDIEAARRTGVHVHfqhvstaisfea 271
Cdd:pfam01979 129 --LKAALEEAKKYGLPVAIHALETKgEVEDAIAAFGGGIEHGTHLEVAESGGLLDIIKLILAHGVHLS------------ 194
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976  272 irkakaeglpitcetaPHYLALSDEALLKYGTLAKMNPPLRSEADRKATIAAIADGTVDLLATDHAPHTleeKELGFLEa 351
Cdd:pfam01979 195 ----------------PTEANLLAEHLKGAGVAHCPFSNSKLRSGRIALRKALEDGVKVGLGTDGAGSG---NSLNMLE- 254
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|..
gi 489925976  352 pngiiglECAYGVcHKVLVDGGFISDERLIELMSVGPAELMG 393
Cdd:pfam01979 255 -------ELRLAL-ELQFDPEGGLSPLEALRMATINPAKALG 288
AdeC COG1001
Adenine deaminase [Nucleotide transport and metabolism];
5-59 3.61e-03

Adenine deaminase [Nucleotide transport and metabolism];


Pssm-ID: 440625 [Multi-domain]  Cd Length: 559  Bit Score: 40.08  E-value: 3.61e-03
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 489925976   5 LRNIKVWN--TGEII--DLVVpgtAAAYFADTSSVVDGAD--IDATGLTLAPGFEDPHVHF 59
Cdd:COG1001    9 IKNGRLVNvfTGEILegDIAI---AGGRIAGVGDYIGEATevIDAAGRYLVPGFIDGHVHI 66
 
Name Accession Description Interval E-value
DHOase_IIa cd01317
Dihydroorotase (DHOase), subgroup IIa; DHOases catalyze the reversible interconversion of ...
37-493 5.66e-149

Dihydroorotase (DHOase), subgroup IIa; DHOases catalyze the reversible interconversion of carbamoyl aspartate to dihydroorotate, a key reaction in pyrimidine biosynthesis. This subgroup also contains proteins that lack the active site, like unc-33, a C.elegans protein involved in axon growth.


Pssm-ID: 238642 [Multi-domain]  Cd Length: 374  Bit Score: 430.89  E-value: 5.66e-149
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976  37 DGADIDATGLTLAPGFEDPHVHFRDPGQTYKESMVSGCRASASGGYTNVLIMPNTLPALDGqtvtdasapgakevldagf 116
Cdd:cd01317    1 DAEVIDAEGKILAPGLVDLHVHLREPGFEYKETLESGAKAAAAGGFTTVVCMPNTNPVIDN------------------- 61
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 117 DNVIDFLQQYdaAHNVkLPVRYDLCVCASKDRAGHEASDVADWLKY-VPGFEDDAKTpamlahpvtavsddgsAVTPKIL 195
Cdd:cd01317   62 PAVVELLKNR--AKDV-GIVRVLPIGALTKGLKGEELTEIGELLEAgAVGFSDDGKP----------------IQDAELL 122
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 196 DQVLENVKTSDLYLIEHCEHHD---TGAVNEGPVSRELGVPGIPEDTELKIVARDIEAARRTGVHVHFQHVSTAISFEAI 272
Cdd:cd01317  123 RRALEYAAMLDLPIIVHPEDPSlagGGVMNEGKVASRLGLPGIPPEAETIMVARDLELAEATGARVHFQHLSTARSLELI 202
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 273 RKAKAEGLPITCETAPHYLALSDEALLKYGTLAKMNPPLRSEADRKATIAAIADGTVDLLATDHAPHTLEEKELGFLEAP 352
Cdd:cd01317  203 RKAKAKGLPVTAEVTPHHLLLDDEALESYDTNAKVNPPLRSEEDREALIEALKDGTIDAIASDHAPHTDEEKDLPFAEAP 282
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 353 NGIIGLECAYGVCHKVLVDGGFISDERLIELMSVGPAELMGHaptdvaalvedyaepaptgedPDGVIageqvadaaESG 432
Cdd:cd01317  283 PGIIGLETALPLLWTLLVKGGLLTLPDLIRALSTNPAKILGL---------------------PPGRL---------EVG 332
                        410       420       430       440       450       460
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 489925976 433 ASQregvnrlldfshvddadavDLVVLDTAEEWTVDPEQFHSKARNTPFGGWQVTGRPLAT 493
Cdd:cd01317  333 APA-------------------DLVLFDPDAEWIVDEETFRSKSKNTPFDGQKLKGRVLAT 374
pyrC PRK09357
dihydroorotase; Validated
1-503 1.44e-138

dihydroorotase; Validated


Pssm-ID: 236479 [Multi-domain]  Cd Length: 423  Bit Score: 406.12  E-value: 1.44e-138
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976   1 MSITLRNIKVWN---TGEIIDLVVPGTAAAYFADTSSVVDGADIDATGLTLAPGFEDPHVHFRDPGQTYKESMVSGCRAS 77
Cdd:PRK09357   1 MMILIKNGRVIDpkgLDEVADVLIDDGKIAAIGENIEAEGAEVIDATGLVVAPGLVDLHVHLREPGQEDKETIETGSRAA 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976  78 ASGGYTNVLIMPNTLPALDgqtvtdaSAPGAKEVLDAGFDN-VIDFLQqydaahnvklpvrydlcVCA-SKDRAGHEASD 155
Cdd:PRK09357  81 AAGGFTTVVAMPNTKPVID-------TPEVVEYVLDRAKEAgLVDVLP-----------------VGAiTKGLAGEELTE 136
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 156 VAdwlkyvpgfeddaktpAMLAHPVTAVSDDGSAV-TPKILDQVLENVKTSDLYLIEHCEHHD---TGAVNEGPVSRELG 231
Cdd:PRK09357 137 FG----------------ALKEAGVVAFSDDGIPVqDARLMRRALEYAKALDLLIAQHCEDPSlteGGVMNEGEVSARLG 200
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 232 VPGIPEDTELKIVARDIEAARRTGVHVHFQHVSTAISFEAIRKAKAEGLPITCETAPHYLALSDEALLKYGTLAKMNPPL 311
Cdd:PRK09357 201 LPGIPAVAEEVMIARDVLLAEATGARVHICHVSTAGSVELIRWAKALGIKVTAEVTPHHLLLTDEDLLTYDPNYKVNPPL 280
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 312 RSEADRKATIAAIADGTVDLLATDHAPHTLEEKELGFLEAPNGIIGLECAYGVCHKVLVDGGFISDERLIELMSVGPAEL 391
Cdd:PRK09357 281 RTEEDREALIEGLKDGTIDAIATDHAPHAREEKECEFEAAPFGITGLETALSLLYTTLVKTGLLDLEQLLEKMTINPARI 360
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 392 MGHAPTDVAALvedyaEPAptgedpdgviageqvadaaesgasqregvnrlldfshvddadavDLVVLDTAEEWTVDPEQ 471
Cdd:PRK09357 361 LGLPAGPLAEG-----EPA--------------------------------------------DLVIFDPEAEWTVDGED 391
                        490       500       510
                 ....*....|....*....|....*....|..
gi 489925976 472 FHSKARNTPFGGWQVTGRPLATIIGSKLMFSR 503
Cdd:PRK09357 392 FASKGKNTPFIGMKLKGKVVYTIVDGKIVYQD 423
AllB COG0044
Dihydroorotase or related cyclic amidohydrolase [Nucleotide transport and metabolism]; ...
5-503 4.52e-133

Dihydroorotase or related cyclic amidohydrolase [Nucleotide transport and metabolism]; Dihydroorotase or related cyclic amidohydrolase is part of the Pathway/BioSystem: Pyrimidine biosynthesis


Pssm-ID: 439814 [Multi-domain]  Cd Length: 439  Bit Score: 392.53  E-value: 4.52e-133
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976   5 LRNIKVWNTGEIID---LVVPGTAAAyFADTSSVVDGAD-IDATGLTLAPGFEDPHVHFRDPGQTYKESMVSGCRASASG 80
Cdd:COG0044    2 IKNGRVVDPGGLERadvLIEDGRIAA-IGPDLAAPEAAEvIDATGLLVLPGLIDLHVHLREPGLEHKEDIETGTRAAAAG 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976  81 GYTNVLIMPNTLPALDgqtvtdaSAPGAKEVLDAgfdnvidflqqydAAHnvKLPVRYDLCVCASKDRaGHEASDVADWL 160
Cdd:COG0044   81 GVTTVVDMPNTNPVTD-------TPEALEFKLAR-------------AEE--KALVDVGPHGALTKGL-GENLAELGALA 137
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 161 KY-VPGFEddaktpamlahpVTAVSDDGSAV-TPKILDQVLENVKTSDLYLIEHCEHHDT---GAVNEGPVSRELGVPGI 235
Cdd:COG0044  138 EAgAVAFK------------VFMGSDDGNPVlDDGLLRRALEYAAEFGALVAVHAEDPDLirgGVMNEGKTSPRLGLKGR 205
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 236 PEDTELKIVARDIEAARRTGVHVHFQHVSTAISFEAIRKAKAEGLPITCETAPHYLALSDEALLKYGTLAKMNPPLRSEA 315
Cdd:COG0044  206 PAEAEEEAVARDIALAEETGARLHIVHVSTAEAVELIREAKARGLPVTAEVCPHHLTLTDEDLERYGTNFKVNPPLRTEE 285
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 316 DRKATIAAIADGTVDLLATDHAPHTLEEKELGFLEAPNGIIGLECAYGVCHKVLVDGGFISDERLIELMSVGPAELMGHA 395
Cdd:COG0044  286 DREALWEGLADGTIDVIATDHAPHTLEEKELPFAEAPNGIPGLETALPLLLTELVHKGRLSLERLVELLSTNPARIFGLP 365
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 396 PTdvaalvedyaepaptgedpdGVIAgeqvadaaesgasqrEGvnrlldfshvddADAvDLVVLDTAEEWTVDPEQFHSK 475
Cdd:COG0044  366 RK--------------------GRIA---------------VG------------ADA-DLVLFDPDAEWTVTAEDLHSK 397
                        490       500
                 ....*....|....*....|....*...
gi 489925976 476 ARNTPFGGWQVTGRPLATIIGSKLMFSR 503
Cdd:COG0044  398 SKNTPFEGRELTGRVVATIVRGRVVYED 425
pyrC_multi TIGR00857
dihydroorotase, multifunctional complex type; In contrast to the homodimeric type of ...
14-499 3.90e-95

dihydroorotase, multifunctional complex type; In contrast to the homodimeric type of dihydroorotase found in E. coli, this class tends to appear in a large, multifunctional complex with aspartate transcarbamoylase. Homologous domains appear in multifunctional proteins of higher eukaryotes. In some species, including Pseudomonas putida and P. aeruginosa, this protein is inactive but is required as a non-catalytic subunit of aspartate transcarbamoylase (ATCase). In these species, a second, active dihydroorotase is also present. The seed for this model does not include any example of the dihydroorotase domain of eukaryotic multidomain pyrimidine synthesis proteins. All proteins described by this model should represent active and inactive dihydroorotase per se and functionally equivalent domains of multifunctional proteins from higher eukaryotes, but exclude related proteins such as allantoinase. [Purines, pyrimidines, nucleosides, and nucleotides, Pyrimidine ribonucleotide biosynthesis]


Pssm-ID: 273302 [Multi-domain]  Cd Length: 411  Bit Score: 294.35  E-value: 3.90e-95
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976   14 GEII--DLVVPGTAAAYFADTSSVVDGADIDATGLTLAPGFEDPHVHFRDPGQTYKESMVSGCRASASGGYTNVLIMPNT 91
Cdd:TIGR00857   1 GKETevDILVEGGRIKKIGKLRIPPDAEVIDAKGLLVLPGFIDLHVHLRDPGEEYKEDIESGSKAAAHGGFTTVADMPNT 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976   92 LPALDGQTVtdasapgakevldagFDNVIDFLQQydaahnvKLPVRYDLCVCASKDRAGHEasdvadwlkyvpgfedDAK 171
Cdd:TIGR00857  81 KPPIDTPET---------------LEWKLQRLKK-------VSLVDVHLYGGVTQGNQGKE----------------LTE 122
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976  172 TPAMLAHPVTAV--SDDGSAV-TPKILDQVLENVKTSDLYLIEHCEHHDT---GAVNEGPVSRELGVPGIPEDTELKIVA 245
Cdd:TIGR00857 123 AYELKEAGAVGRmfTDDGSEVqDILSMRRALEYAAIAGVPIALHAEDPDLiygGVMHEGPSAAQLGLPARPPEAEEVAVA 202
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976  246 RDIEAARRTGVHVHFQHVSTAISFEAIRKAKAEGLPITCETAPHYLALSDEALLKYGTLAKMNPPLRSEADRKATIAAIA 325
Cdd:TIGR00857 203 RLLELAKHAGCPVHICHISTKESLELIVKAKSQGIKITAEVTPHHLLLSEEDVARLDGNGKVNPPLREKEDRLALIEGLK 282
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976  326 DGTVDLLATDHAPHTLEEKELGFLEAPNGIIGLECAYGvCHKVLVDGGFISDERLIELMSVGPAELMGhaptdvaalved 405
Cdd:TIGR00857 283 DGIIDIIATDHAPHTLEEKTKEFAAAPPGIPGLETALP-LLLQLLVKGLISLKDLIRMLSINPARIFG------------ 349
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976  406 yaepaptgedpdgviageqvadaaesgasqregvnrLLDFSHVDDADAVDLVVLDTAEEWTVDPEQFHSKARNTPFGGWQ 485
Cdd:TIGR00857 350 ------------------------------------LPDKGTLEEGNPADITVFDLKKEWTINAETFYSKAKNTPFEGMS 393
                         490
                  ....*....|....
gi 489925976  486 VTGRPLATIIGSKL 499
Cdd:TIGR00857 394 LKGKPIATILRGKV 407
DHOase_IIb cd01318
Dihydroorotase (DHOase), subgroup IIb; DHOases catalyze the reversible interconversion of ...
45-496 1.25e-70

Dihydroorotase (DHOase), subgroup IIb; DHOases catalyze the reversible interconversion of carbamoyl aspartate to dihydroorotate, a key reaction in pyrimidine biosynthesis. This group contains the archeal members of the DHOase family.


Pssm-ID: 238643 [Multi-domain]  Cd Length: 361  Bit Score: 229.14  E-value: 1.25e-70
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976  45 GLTLAPGFEDPHVHFRDPGQTYKESMVSGCRASASGGYTNVLIMPNTLPAldgqtVTDASAPGAKEVLDAGfDNVIDFL- 123
Cdd:cd01318    1 GLLILPGVIDIHVHFREPGLTYKEDFVSGSRAAAAGGVTTVMDMPNTKPP-----TTTAEALYEKLRLAAA-KSVVDYGl 74
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 124 -----QQYDAAHNVKLPVrydlcvcaskdrAGHE---ASDVADWLKYVPGFEDDAktpAMLAHPVTAvsddgsavtpkil 195
Cdd:cd01318   75 yfgvtGSEDLEELDKAPP------------AGYKifmGDSTGDLLDDEETLERIF---AEGSVLVTF------------- 126
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 196 dqvlenvktsdlylieHCEHHDTGAVNEGPVSRELGVPGI-PEDTELKIVARDIEAARRTGVHVHFQHVSTAISFEAIRK 274
Cdd:cd01318  127 ----------------HAEDEDRLRENRKELKGESAHPRIrDAEAAAVATARALKLARRHGARLHICHVSTPEELKLIKK 190
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 275 AKAEglpITCETAPHYLALSDEALLKYGTLAKMNPPLRSEADRKATIAAIADGTVDLLATDHAPHTLEEKELGFLEAPNG 354
Cdd:cd01318  191 AKPG---VTVEVTPHHLFLDVEDYDRLGTLGKVNPPLRSREDRKALLQALADGRIDVIASDHAPHTLEEKRKGYPAAPSG 267
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 355 IIGLECAYGVCHKvLVDGGFISDERLIELMSVGPAELMGhaptdvaalVEDYAEpaptgedpdgviageqvadaaesgas 434
Cdd:cd01318  268 IPGVETALPLMLT-LVNKGILSLSRVVRLTSHNPARIFG---------IKNKGR-------------------------- 311
                        410       420       430       440       450       460
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 489925976 435 QREGvnrlldfshvDDAdavDLVVLDTAEEWTVDPEQFHSKARNTPFGGWQVTGRPLATIIG 496
Cdd:cd01318  312 IAEG----------YDA---DLTVVDLKEERTIRAEEFHSKAGWTPFEGFEVTGFPVMTIVR 360
PRK02382 PRK02382
dihydroorotase; Provisional
1-485 2.70e-61

dihydroorotase; Provisional


Pssm-ID: 179417 [Multi-domain]  Cd Length: 443  Bit Score: 207.20  E-value: 2.70e-61
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976   1 MSITLRNIKVWNTGEIID---LVVPGTAAAYFADTSSVVDGADIDATGLTLAPGFEDPHVHFRDPGQTYKESMVSGCRAS 77
Cdd:PRK02382   2 RDALLKDGRVYYNNSLQPrdvRIDGGKITAVGKDLDGSSSEEVIDARGMLLLPGGIDVHVHFREPGYTHKETWYTGSRSA 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976  78 ASGGYTNVLIMPNTLPaldgqTVTDASAPGAKEVLdAGFDNVIDFlqqydaahnvklpvrydlcvcaskdraGHEASDVA 157
Cdd:PRK02382  82 AAGGVTTVVDQPNTDP-----PTVDGESFDEKAEL-AARKSIVDF---------------------------GINGGVTG 128
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 158 DWlkyvpgfeddAKTPAMLAHPVTAV-------SDDGSAVTPKILDQVLENVKTSDLYLIEHCEHHDTGAVNEGPVSREL 230
Cdd:PRK02382 129 NW----------DPLESLWERGVFALgeifmadSTGGMGIDEELFEEALAEAARLGVLATVHAEDEDLFDELAKLLKGDA 198
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 231 GvPGI-----PEDTELKIVARDIEAARRTGVHVHFQHVSTAISFEAIRKAKaeglpITCETAPHYLALSDEALLKYGTLA 305
Cdd:PRK02382 199 D-ADAwsayrPAAAEAAAVERALEVASETGARIHIAHISTPEGVDAARREG-----ITCEVTPHHLFLSRRDWERLGTFG 272
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 306 KMNPPLRSEADRKATIAAIADGTVDLLATDHAPHTLEEKELGFLEAPNGIIGLECAYGVCHKVLVDGGFiSDERLIELMS 385
Cdd:PRK02382 273 KMNPPLRSEKRREALWERLNDGTIDVVASDHAPHTREEKDADIWDAPSGVPGVETMLPLLLAAVRKNRL-PLERVRDVTA 351
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 386 VGPAELMGHaptdvaalvedyaepaptgeDPDGVIAgeqvadaaesgasqrEGvnrlldfshvddADAvDLVVLDTAEEW 465
Cdd:PRK02382 352 ANPARIFGL--------------------DGKGRIA---------------EG------------YDA-DLVLVDPDAAR 383
                        490       500
                 ....*....|....*....|
gi 489925976 466 TVDPEQFHSKARNTPFGGWQ 485
Cdd:PRK02382 384 EIRGDDLHSKAGWTPFEGME 403
L-HYD_ALN cd01315
L-Hydantoinases (L-HYDs) and Allantoinase (ALN); L-Hydantoinases are a member of the ...
5-495 1.56e-58

L-Hydantoinases (L-HYDs) and Allantoinase (ALN); L-Hydantoinases are a member of the dihydropyrimidinase family, which catalyzes the reversible hydrolytic ring opening of dihydropyrimidines and hydantoins (five-membered cyclic diamides used in biotechnology). But L-HYDs differ by having an L-enantio specificity and by lacking activity on possible natural substrates such as dihydropyrimidines. Allantoinase catalyzes the hydrolytic cleavage of the five-member ring of allantoin (5-ureidohydantoin) to form allantoic acid.


Pssm-ID: 238640 [Multi-domain]  Cd Length: 447  Bit Score: 200.21  E-value: 1.56e-58
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976   5 LRNIKVWNTGEII--DLVVPGTAAAYFADTSSVVDGAD-IDATGLTLAPGFEDPHVHFRDPGQTYKESMVSGCRASASGG 81
Cdd:cd01315    4 IKNGRVVTPDGVReaDIAVKGGKIAAIGPDIANTEAEEvIDAGGLVVMPGLIDTHVHINEPGRTEWEGFETGTKAAAAGG 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976  82 YTNVLIMP-NTLPAldgqTVTDASapgakevldagfdnvidFLQQYDAAHNvKLPVrydlcvcaskdragheasDVADWL 160
Cdd:cd01315   84 ITTIIDMPlNSIPP----TTTVEN-----------------LEAKLEAAQG-KLHV------------------DVGFWG 123
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 161 KYVPGFEDDAKT---------PAMLAHPVTavsDDGSAVTPKILDQVLENVKTSDLYLIEHCE------HHDTGAVNEGP 225
Cdd:cd01315  124 GLVPGNLDQLRPldeagvvgfKCFLCPSGV---DEFPAVDDEQLEEAMKELAKTGSVLAVHAEnpeiteALQEQAKAKGK 200
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 226 VSRELGVPGIPEDTELKIVARDIEAARRTGVHVHFQHVSTAISFEAIRKAKAEGLPITCETAPHYLALSDEALLKYGTLA 305
Cdd:cd01315  201 RDYRDYLASRPVFTEVEAIQRILLLAKETGCRLHIVHLSSAEAVPLIREARAEGVDVTVETCPHYLTFTAEDVPDGGTEF 280
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 306 KMNPPLRSEADRKATIAAIADGTVDLLATDHAPHTLEEKELG---FLEAPNGIIGLECAYGVCHKVLVDGGFISDERLIE 382
Cdd:cd01315  281 KCAPPIRDAANQEQLWEALENGDIDMVVSDHSPCTPELKLLGkgdFFKAWGGISGLQLGLPVMLTEAVNKRGLSLEDIAR 360
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 383 LMSVGPAELMGHAPTdvaalvedyaepaptgedpDGVIAgeqvadaaesgasqrEGvnrlldfshvddADAvDLVVLDTA 462
Cdd:cd01315  361 LMCENPAKLFGLSHQ-------------------KGRIA---------------VG------------YDA-DFVVWDPE 393
                        490       500       510
                 ....*....|....*....|....*....|...
gi 489925976 463 EEWTVDPEQFHSKARNTPFGGWQVTGRPLATII 495
Cdd:cd01315  394 EEFTVDAEDLYYKNKISPYVGRTLKGRVHATIL 426
Cyclic_amidohydrolases cd01302
Cyclic amidohydrolases, including hydantoinase, dihydropyrimidinase, allantoinase, and ...
50-493 2.72e-58

Cyclic amidohydrolases, including hydantoinase, dihydropyrimidinase, allantoinase, and dihydroorotase, are involved in the metabolism of pyrimidines and purines, sharing the property of hydrolyzing the cyclic amide bond of each substrate to the corresponding N-carbamyl amino acids. Allantoinases catalyze the degradation of purines, while dihydropyrimidinases and hydantoinases, a microbial counterpart of dihydropyrimidinase, are involved in pyrimidine degradation. Dihydroorotase participates in the de novo synthesis of pyrimidines.


Pssm-ID: 238627 [Multi-domain]  Cd Length: 337  Bit Score: 196.07  E-value: 2.72e-58
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976  50 PGFEDPHVHFRDPGQT-YKESMVSGCRASASGGYTNVLIMPNTLPaldGQTVTDASApgaKEVLDAGFDNVIDFlqqydA 128
Cdd:cd01302    5 PGFIDIHVHLRDPGGTtYKEDFESGSRAAAAGGVTTVIDMPNTGP---PPIDLPAIE---LKIKLAEESSYVDF-----S 73
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 129 AHnvklpvrydlcvcaskdrAGHEASDVADWLKyvPGFEDDA---KTPAMLAHPVTAVSDDGSavtpkiLDQVLENVKTS 205
Cdd:cd01302   74 FH------------------AGIGPGDVTDELK--KLFDAGInslKVFMNYYFGELFDVDDGT------LMRTFLEIASR 127
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 206 DLYLIEHCEhhdtgavnegpvsrelgvpgipedtelkivaRDIEAARRTGVHVHFQHVSTAISFEAIRKAKAEGLPITCE 285
Cdd:cd01302  128 GGPVMVHAE-------------------------------RAAQLAEEAGANVHIAHVSSGEALELIKFAKNKGVKVTCE 176
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 286 TAPHYLALSDEALLKYGTLAKMNPPLRSEADRKATIAAIADGTVDLLATDHAPHTLEEKELG--FLEAPNGIIGLECAY- 362
Cdd:cd01302  177 VCPHHLFLDESMLRLNGAWGKVNPPLRSKEDREALWEGVKNGKIDTIASDHAPHSKEEKESGkdIWKAPPGFPGLETRLp 256
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 363 GVCHKVLVDGgfISDERLIELMSVGPAELMghaptdvaalvedyaepaptGEDPDGVIAgeqvadaaeSGASQregvnrl 442
Cdd:cd01302  257 ILLTEGVKRG--LSLETLVEILSENPARIF--------------------GLYPKGTIA---------VGYDA------- 298
                        410       420       430       440       450
                 ....*....|....*....|....*....|....*....|....*....|.
gi 489925976 443 ldfshvddadavDLVVLDTAEEWTVDPEQFHSKARNTPFGGWQVTGRPLAT 493
Cdd:cd01302  299 ------------DLVIVDPKKEWKVTAEEIESKADWTPFEGMEVTGKPVST 337
PRK09059 PRK09059
dihydroorotase; Validated
24-502 4.95e-57

dihydroorotase; Validated


Pssm-ID: 181631 [Multi-domain]  Cd Length: 429  Bit Score: 195.64  E-value: 4.95e-57
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976  24 TAAAYFADTSSVVDGADI-DATGLTLAPGFEDPHVHFRDPGQTYKESMVSGCRASASGGYTNVLIMPNTLPALDGQTVTD 102
Cdd:PRK09059  33 VAAGKGAGNQGAPEGAEIvDCAGKAVAPGLVDARVFVGEPGAEHRETIASASRAAAAGGVTSIIMMPDTDPVIDDVALVE 112
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 103 ASAPGAKEVldagfdnvidflqqydAAHNVKlPVrydlcVCASKDRAGHEASDVadwlkyvpGFEDDAKtpamlahpVTA 182
Cdd:PRK09059 113 FVKRTARDT----------------AIVNIH-PA-----AAITKGLAGEEMTEF--------GLLRAAG--------AVA 154
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 183 VSDDGSAVT-PKILDQVLENVKTSDLYLIEHCEHHD---TGAVNEGPVSRELGVPGIPEDTELKIVARDIEAARRTGVHV 258
Cdd:PRK09059 155 FTDGRRSVAnTQVMRRALTYARDFDAVIVHETRDPDlggNGVMNEGLFASWLGLSGIPREAEVIPLERDLRLAALTRGRY 234
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 259 HFQHVSTAISFEAIRKAKAEGLPITCETAPHYLALSDEALLKYGTLAKMNPPLRSEADRKATIAAIADGTVDLLATDHAP 338
Cdd:PRK09059 235 HAAQISCAESAEALRRAKDRGLKVTAGVSINHLSLNENDIGEYRTFFKLSPPLRTEDDRVAMVEAVASGTIDIIVSSHDP 314
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 339 HTLEEKELGFLEAPNGIIGLECAYGVCHKvLVDGGFISDERLIELMSVGPAELMGHaptdvaalvedyaePAPTgedpdg 418
Cdd:PRK09059 315 QDVDTKRLPFSEAAAGAIGLETLLAAALR-LYHNGEVPLLRLIEALSTRPAEIFGL--------------PAGT------ 373
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 419 viageqvadaAESGAsqregvnrlldfshvddadAVDLVVLDTAEEWTVDPEQFHSKARNTPFGGWQVTGRPLATIIGSK 498
Cdd:PRK09059 374 ----------LKPGA-------------------PADIIVIDLDEPWVVDPEDLKSRSKNTPFEEARFQGRVVRTIVAGK 424

                 ....
gi 489925976 499 LMFS 502
Cdd:PRK09059 425 TVYE 428
PRK07369 PRK07369
dihydroorotase; Provisional
41-493 1.37e-55

dihydroorotase; Provisional


Pssm-ID: 236002 [Multi-domain]  Cd Length: 418  Bit Score: 191.35  E-value: 1.37e-55
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976  41 IDATGLTLAPGFEDPHVHFRDPGQTYKESMVSGCRASASGGYTNVLIMPNTLPALDGqtvtdasaPGAkevldagfdnvI 120
Cdd:PRK07369  48 IDASGLILGPGLVDLYSHSGEPGFEERETLASLAAAAAAGGFTRVAILPDTFPPLDN--------PAT-----------L 108
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 121 DFLQQYDAAhnvKLPVRYDLCVCASKDRAGHEASDVADWLKY-VPGFeddaktpamlahpvtavSDDGSAVTPKILDQVL 199
Cdd:PRK07369 109 ARLQQQAQQ---IPPVQLHFWGALTLGGQGKQLTELAELAAAgVVGF-----------------TDGQPLENLALLRRLL 168
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 200 ENVKT---------SDLYLiehcehHDTGAVNEGPVSRELGVPGIPEDTELKIVARDIEAARRTGVHVHFQHVSTAISFE 270
Cdd:PRK07369 169 EYLKPlgkpvalwpCDRSL------AGNGVMREGLLALRLGLPGDPASAETTALAALLELVAAIGTPVHLMRISTARSVE 242
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 271 AIRKAKAEGLPITCETAPHYLALSDEALLKYGTLAKMNPPLRSEADRKATIAAIADGTVDLLATDHAPHTLEEKELGFLE 350
Cdd:PRK07369 243 LIAQAKARGLPITASTTWMHLLLDTEALASYDPNLRLDPPLGNPSDRQALIEGVRTGVIDAIAIDHAPYTYEEKTVAFAE 322
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 351 APNGIIGLECAYGVCHKVLVDGGFISDERLIELMSVGPAELMGHAPTDVAalVEDYAEpaptgedpdgviageqvadaae 430
Cdd:PRK07369 323 APPGAIGLELALPLLWQNLVETGELSALQLWQALSTNPARCLGQEPPSLA--PGQPAE---------------------- 378
                        410       420       430       440       450       460
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 489925976 431 sgasqregvnrlldfshvddadavdLVVLDTAEEWTVDPEQFHSKARNTPFGGWQVTGRPLAT 493
Cdd:PRK07369 379 -------------------------LILFDPQKTWTVSAQTLHSLSRNTPWLGQTLKGRVLQT 416
PRK07575 PRK07575
dihydroorotase; Provisional
1-503 2.28e-55

dihydroorotase; Provisional


Pssm-ID: 236055 [Multi-domain]  Cd Length: 438  Bit Score: 191.43  E-value: 2.28e-55
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976   1 MSITLRNIK-VWNTGEII--DLVVPGTAAAYFADTSSVVDGAD-IDATGLTLAPGFEDPHVHFRDPGQTYKESMVSGCRA 76
Cdd:PRK07575   3 MSLLIRNARiLLPSGELLlgDVLVEDGKIVAIAPEISATAVDTvIDAEGLTLLPGVIDPQVHFREPGLEHKEDLFTASRA 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976  77 SASGGYTNVLIMPNTLP-ALDGQTVTDASAPGA-KEVLDAGF------DNVIDfLQQYDAAHNVKLPVrydlcvcaskdr 148
Cdd:PRK07575  83 CAKGGVTSFLEMPNTKPlTTTQAALDDKLARAAeKCVVNYGFfigatpDNLPE-LLTANPTCGIKIFM------------ 149
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 149 agheasdvadwlkyvpgfeddaktpamlahpvtavsddGSAVTPKILDQ--VLENVKTSDLYLIE-HCEhhDTGAVNEgp 225
Cdd:PRK07575 150 --------------------------------------GSSHGPLLVDEeaALERIFAEGTRLIAvHAE--DQARIRA-- 187
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 226 vsRELGVPGIPE--------DTELKIVA--RDIEAARRTGVHVHFQHVSTAISFEAIRKAKaeGLPITCETAPHYLALSD 295
Cdd:PRK07575 188 --RRAEFAGISDpadhsqiqDEEAALLAtrLALKLSKKYQRRLHILHLSTAIEAELLRQDK--PSWVTAEVTPQHLLLNT 263
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 296 EALLKYGTLAKMNPPLRSEADRKATIAAIADGTVDLLATDHAPHTLEEKELGFLEAPNGIIGLECAYGVCHKVLVDgGFI 375
Cdd:PRK07575 264 DAYERIGTLAQMNPPLRSPEDNEALWQALRDGVIDFIATDHAPHTLEEKAQPYPNSPSGMPGVETSLPLMLTAAMR-GKC 342
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 376 SDERLIELMSVGPAELMGhaptdvaalvedyaepaptgedpdgvIAGEqvaDAAESGAsqregvnrlldfshvdDADAVd 455
Cdd:PRK07575 343 TVAQVVRWMSTAVARAYG--------------------------IPNK---GRIAPGY----------------DADLV- 376
                        490       500       510       520
                 ....*....|....*....|....*....|....*....|....*...
gi 489925976 456 LVVLDTAEewTVDPEQFHSKARNTPFGGWQVTGRPLATIIGSKLMFSR 503
Cdd:PRK07575 377 LVDLNTYR--PVRREELLTKCGWSPFEGWNLTGWPVTTIVGGQIVFDR 422
PRK09060 PRK09060
dihydroorotase; Validated
14-500 7.14e-50

dihydroorotase; Validated


Pssm-ID: 181632 [Multi-domain]  Cd Length: 444  Bit Score: 177.03  E-value: 7.14e-50
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976  14 GEIIDLVVPGTAAAyfadtssvvdGADIDATGLTLAPGFEDPHVHFRDPGQTYKESMVSGCRASASGGYTNVLIMPNTLP 93
Cdd:PRK09060  30 GRIAAIGDLSGASA----------GEVIDCRGLHVLPGVIDSQVHFREPGLEHKEDLETGSRAAVLGGVTAVFEMPNTNP 99
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976  94 aldgqTVTDASAPGAKevldagfdnvidflqqYDAAHNvKLPVRYDLCVCASKDRAGHEASdvadwLKYVPG------FE 167
Cdd:PRK09060 100 -----LTTTAEALADK----------------LARARH-RMHCDFAFYVGGTRDNADELAE-----LERLPGcagikvFM 152
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 168 DdAKTPAMLahpvtaVSDDGSavtpkiLDQVLENVKTSDLYlieHCEhhDTGAVNEgpvSRELGVPGipeDTELKIVARD 247
Cdd:PRK09060 153 G-SSTGDLL------VEDDEG------LRRILRNGRRRAAF---HSE--DEYRLRE---RKGLRVEG---DPSSHPVWRD 208
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 248 IEAA-----------RRTGVHVHFQHVSTAISFEAIRKAKAEglpITCETAPHYLALS-DEALLKYGTLAKMNPPLRSEA 315
Cdd:PRK09060 209 EEAAllatrrlvrlaRETGRRIHVLHVSTAEEIDFLADHKDV---ATVEVTPHHLTLAaPECYERLGTLAQMNPPIRDAR 285
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 316 DRKATIAAIADGTVDLLATDHAPHTLEEKELGFLEAPNGIIGLECAYGVC--HkvlVDGGFISDERLIELMSVGPAELMG 393
Cdd:PRK09060 286 HRDGLWRGVRQGVVDVLGSDHAPHTLEEKAKPYPASPSGMTGVQTLVPIMldH---VNAGRLSLERFVDLTSAGPARIFG 362
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 394 HAPTdvaalvedyaepaptgedpdGVIAgeqvadaaesgasqrEGVnrlldfshvdDAdavDLVVLDTAEEWTVDPEQFH 473
Cdd:PRK09060 363 IAGK--------------------GRIA---------------VGY----------DA---DFTIVDLKRRETITNEWIA 394
                        490       500
                 ....*....|....*....|....*...
gi 489925976 474 SKARNTPFGGWQVTGRPLATII-GSKLM 500
Cdd:PRK09060 395 SRCGWTPYDGKEVTGWPVGTIVrGQRVM 422
PRK09236 PRK09236
dihydroorotase; Reviewed
1-501 1.50e-49

dihydroorotase; Reviewed


Pssm-ID: 181716  Cd Length: 444  Bit Score: 175.83  E-value: 1.50e-49
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976   1 MSITLRNIKVWNTGEIID---LVVPGTAAAYFADTSSVVDGADIDATGLTLAPGFEDPHVHFRDPGQTYKESMVSGCRAS 77
Cdd:PRK09236   2 KRILIKNARIVNEGKIFEgdvLIENGRIAKIASSISAKSADTVIDAAGRYLLPGMIDDQVHFREPGLTHKGDIASESRAA 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976  78 ASGGYTNVLIMPNTLPaldgQTVTDAsAPGAKEVLDA-------GF------DNvIDFLQQYDAAHnvklpvrydlcVCA 144
Cdd:PRK09236  82 VAGGITSFMEMPNTNP----PTTTLE-ALEAKYQIAAqrslanySFyfgatnDN-LDEIKRLDPKR-----------VCG 144
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 145 SKDRAGheasdvadwlkyvpgfeddAKTPAMLAhpvtavsDDgsavtPKILDQVLENvktSDLYLIEHCEHHDTGAVNEG 224
Cdd:PRK09236 145 VKVFMG-------------------ASTGNMLV-------DN-----PETLERIFRD---APTLIATHCEDTPTIKANLA 190
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 225 PVSRELGVPgIPEDTELKIvaRDIEA-----------ARRTGVHVHFQHVSTAISFEAIRKAKAEGLPITCETAPHYLAL 293
Cdd:PRK09236 191 KYKEKYGDD-IPAEMHPLI--RSAEAcykssslavslAKKHGTRLHVLHISTAKELSLFENGPLAEKRITAEVCVHHLWF 267
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 294 SDEALLKYGTLAKMNPPLRSEADRKATIAAIADGTVDLLATDHAPHTLEEKELGFLEAPNG--------IIGLEcaygvc 365
Cdd:PRK09236 268 DDSDYARLGNLIKCNPAIKTASDREALRQALADDRIDVIATDHAPHTWEEKQGPYFQAPSGlplvqhalPALLE------ 341
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 366 hkvLVDGGFISDERLIELMSVGPAELMGhaptdvaalVEDyaepaptgedpDGVIageqvadaaesgasqREGVnrlldf 445
Cdd:PRK09236 342 ---LVHEGKLSLEKVVEKTSHAPAILFD---------IKE-----------RGFI---------------REGY------ 377
                        490       500       510       520       530
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 489925976 446 shvddadAVDLVVLDTAEEWTVDPEQFHSKARNTPFGGWQVTGRPLATIIGSKLMF 501
Cdd:PRK09236 378 -------WADLVLVDLNSPWTVTKENILYKCGWSPFEGRTFRSRVATTFVNGQLVY 426
allantoinase TIGR03178
allantoinase; This enzyme carries out the first step in the degradation of allantoin, a ...
41-495 2.65e-48

allantoinase; This enzyme carries out the first step in the degradation of allantoin, a ring-opening hydrolysis. The seed members of this model are all in the vicinity of other genes involved in the processes of xanthine/urate/allantoin catabolism. Although not included in the seed, many eukaryotic homologs of this family are included above the trusted cutoff. Below the noise cutoff are related hydantoinases.


Pssm-ID: 163175 [Multi-domain]  Cd Length: 443  Bit Score: 172.57  E-value: 2.65e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976   41 IDATGLTLAPGFEDPHVHFRDPGQTYKESMVSGCRASASGGYTNVLIMP-NTLPAldgqTVTDASapgakevldagfdnv 119
Cdd:TIGR03178  42 IDAGGLVVFPGVVDTHVHINEPGRTEWEGFETGTRAAAAGGITTYIDMPlNSIPA----TTTRAS--------------- 102
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976  120 idFLQQYDAAhnvklpvrydlcvcaskdrAGHEASDVADWLKYVPGFEDDakTPAMLAHPVTAV--------SDDGSAVT 191
Cdd:TIGR03178 103 --LEAKFEAA-------------------KGKLAVDVGFWGGLVPYNLDD--LRELDEAGVVGFkaflspsgDDEFPHVD 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976  192 PKILDQVLENVKTSDLYLIEHCE---HHD---TGAVNEGPVSRELGVPGIPEDTELKIVARDIEAARRTGVHVHFQHVST 265
Cdd:TIGR03178 160 DWQLYKGMRELARLGQLLLVHAEnpaITSalgEEAPPQGGVGADAYLASRPVFAEVEAIRRTLALAKVTGCRVHVVHLSS 239
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976  266 AISFEAIRKAKAEGLPITCETAPHYLALSDEALLKYGTLAKMNPPLRSEADRKATIAAIADGTVDLLATDHAPHTLEEKE 345
Cdd:TIGR03178 240 AEAVELITEAKQEGLDVTVETCPHYLTLTAEEVPDGGTLAKCAPPIRDLANQEGLWEALLNGLIDCVVSDHSPCTPDLKR 319
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976  346 LG-FLEAPNGIIGLECAYGVCHKVLVDGGFISDERLIELMSVGPAELMGHAPTdvaalvedyaepaptgedpdGVIAGeq 424
Cdd:TIGR03178 320 AGdFFKAWGGIAGLQSTLDVMFDEAVQKRGLPLEDIARLMATNPAKRFGLAQK--------------------GRIAP-- 377
                         410       420       430       440       450       460       470
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 489925976  425 vadaaesgasqregvnrlldfshvdDADAvDLVVLDTAEEWTVDPEQFHSKARNTPFGGWQVTGRPLATII 495
Cdd:TIGR03178 378 -------------------------GKDA-DFVFVDPDESYTLTPDDLYYRHKVSPYVGRTIGGRVRATYL 422
PRK08417 PRK08417
metal-dependent hydrolase;
30-393 7.27e-44

metal-dependent hydrolase;


Pssm-ID: 236262 [Multi-domain]  Cd Length: 386  Bit Score: 159.10  E-value: 7.27e-44
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976  30 ADTSSVVDGADI-DATGLTLAPGFEDPHVHFRDPGQTYK--ESMVSGCRAsasGGYTNVLIMPNTLPALDGQtvtdasap 106
Cdd:PRK08417   9 TEIGSDLKGEEIlDAKGKTLLPALVDLNVSLKNDSLSSKnlKSLENECLK---GGVGSIVLYPDSTPAIDNE-------- 77
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 107 gakevldagfdNVIDFLQQYDaaHNVKLPVRYDLCVCASKDRAgheaSDVADWLKYvpgfedDAKTPAMlahpvtavsdd 186
Cdd:PRK08417  78 -----------IALELINSAQ--RELPMQIFPSIRALDEDGKL----SNIATLLKK------GAKALEL----------- 123
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 187 GSAVTPKILDQVLENVKTSDLYLIEHCEHH---DTGAVNEGPVSRELGVPGIPEDTELKIVARDIEAARRTGVHVHFQHV 263
Cdd:PRK08417 124 SSDLDANLLKVIAQYAKMLDVPIFCRCEDSsfdDSGVMNDGELSFELGLPGIPSIAETKEVAKMKELAKFYKNKVLFDTL 203
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 264 STAISFEAIRKAKAEGLPITCETAPHYLALSDEALLKYGTLAKMNPPLRSEADRKATIAAIADGTVDLLATDHAPHTLEE 343
Cdd:PRK08417 204 ALPRSLELLDKFKSEGEKLLKEVSIHHLILDDSACENFNTAAKLNPPLRSKEDRLALLEALKEGKIDFLTSLHSAKSNSK 283
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|
gi 489925976 344 KELGFLEAPNGIIGLECAYGVCHKVLVDGGFISDERLIELMSVGPAELMG 393
Cdd:PRK08417 284 KDLAFDEAAFGIDSICEYFSLCYTYLVKEGIITWSELSRFTSYNPAQFLG 333
PRK06189 PRK06189
allantoinase; Provisional
18-494 5.39e-41

allantoinase; Provisional


Pssm-ID: 235732 [Multi-domain]  Cd Length: 451  Bit Score: 152.93  E-value: 5.39e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976  18 DLVVPGTAAAYFADTSSVVDGADIDATGLTLAPGFEDPHVHFRDPGQTYKESMVSGCRASASGGYTNVLIMP-NTLPAld 96
Cdd:PRK06189  22 DIGIKNGKIAEIAPEISSPAREIIDADGLYVFPGMIDVHVHFNEPGRTHWEGFATGSAALAAGGCTTYFDMPlNSIPP-- 99
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976  97 gqTVTdasapgaKEVLDAgfdnvidflqqydaahnvklpvrydlcvcasKDRAGHEAS--DVADWLKYVPGFEDDAKT-- 172
Cdd:PRK06189 100 --TVT-------REALDA-------------------------------KAELARQKSavDFALWGGLVPGNLEHLREla 139
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 173 -------PAMLAHPVTavsDDGSAVTPKILDQVLENVKTSDLYLIEHCE------HHDTGAVNEGPVSRELGVPGIPEDT 239
Cdd:PRK06189 140 eagvigfKAFMSNSGT---DEFRSSDDLTLYEGMKEIAALGKILALHAEsdaltrHLTTQARQQGKTDVRDYLESRPVVA 216
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 240 ELKIVARDIEAARRTGVHVHFQHVSTAISFEAIRKAKAEGLPITCETAPHYLALSDEALLKYGTLAKMNPPLRSEADRKA 319
Cdd:PRK06189 217 ELEAVQRALLYAQETGCPLHFVHISSGKAVALIAEAKKRGVDVSVETCPHYLLFTEEDFERIGAVAKCAPPLRSRSQKEE 296
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 320 TIAAIADGTVDLLATDHAPHTLEEKE-LGFLEAPNGIIGLECAYGVchkVLVDGGF---ISDERLIELMSVGPAELMGHA 395
Cdd:PRK06189 297 LWRGLLAGEIDMISSDHSPCPPELKEgDDFFLVWGGISGGQSTLLV---MLTEGYIergIPLETIARLLATNPAKRFGLP 373
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 396 PTdvaalvedyaepaptgedpdGVIAgeqvadaaesgasqrEGvnrlldfshvddADAvDLVVLDTAEEWTVDPEQFHSK 475
Cdd:PRK06189 374 QK--------------------GRLE---------------VG------------ADA-DFVLVDLDETYTLTKEDLFYR 405
                        490
                 ....*....|....*....
gi 489925976 476 ARNTPFGGWQVTGRPLATI 494
Cdd:PRK06189 406 HKQSPYEGRTFPGRVVATY 424
PRK07627 PRK07627
dihydroorotase; Provisional
23-503 1.22e-40

dihydroorotase; Provisional


Pssm-ID: 181059 [Multi-domain]  Cd Length: 425  Bit Score: 151.37  E-value: 1.22e-40
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976  23 GTAAAYFADTSSvvdgadIDATGLTLAPGFEDPHVHFRDPGQTYKESMVSGCRASASGGYTNVLIMPNTLPALDgqtvtd 102
Cdd:PRK07627  34 GQAPAGFNADKT------IDASGLIVCPGLVDLSARLREPGYEYKATLESEMAAAVAGGVTSLVCPPDTDPVLD------ 101
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 103 asAPGAKEVLDAgfdnvidflqqydAAHNVKLPVRYDLCVCASKDR--------AGHEASDVadwlkyvpGFEDdAKTPA 174
Cdd:PRK07627 102 --EPGLVEMLKF-------------RARNLNQAHVYPLGALTVGLKgevltemvELTEAGCV--------GFSQ-ANVPV 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 175 mlahpvtavsddgsaVTPKILDQVLENVKT---------SDLYLIEHcehhdtGAVNEGPVSRELGVPGIPEDTELKIVA 245
Cdd:PRK07627 158 ---------------VDTQVLLRALQYASTfgftvwlrpLDAFLGRG------GVAASGAVASRLGLSGVPVAAETIALH 216
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 246 RDIEAARRTGVHVHFQHVSTAISFEAIRKAKAEGLPITCETAPHYLALSDEALLKYGTLAKMNPPLRSEADRKATIAAIA 325
Cdd:PRK07627 217 TIFELMRVTGARVHLARLSSAAGVALVRAAKAEGLPVTCDVGVNHVHLIDVDIGYFDSQFRLDPPLRSQRDREAIRAALA 296
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 326 DGTVDLLATDHAPHTLEEKELGFLEAPNGIIGLECAYGVCHKvlvdggfISDERLIELmsvgpaelmghaptdVAALVED 405
Cdd:PRK07627 297 DGTIDAICSDHTPVDDDEKLLPFAEATPGATGLELLLPLTLK-------WADEAKVPL---------------ARALARI 354
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 406 YAEPAptgeDPDGVIAGEQVADAaesgasqregvnrlldfshvddadAVDLVVLDTAEEWTVDPEQFHSKARNTPFGGWQ 485
Cdd:PRK07627 355 TSAPA----RVLGLPAGRLAEGA------------------------PADLCVFDPDAHWRVEPRALKSQGKNTPFLGYE 406
                        490
                 ....*....|....*...
gi 489925976 486 VTGRPLATIIGSKLMFSR 503
Cdd:PRK07627 407 LPGRVRATLVAGQVAFER 424
PRK04250 PRK04250
dihydroorotase; Provisional
41-500 3.51e-40

dihydroorotase; Provisional


Pssm-ID: 235265 [Multi-domain]  Cd Length: 398  Bit Score: 149.53  E-value: 3.51e-40
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976  41 IDATGLTLAPGFEDPHVHFRDPGQTYKESMVSGCRASASGGYTNVLIMPNTLPALDGQTVTDasapgaKEVLDAGFDNVI 120
Cdd:PRK04250  38 IKVKGGIILPGLIDVHVHLRDFEESYKETIESGTKAALHGGITLVFDMPNTKPPIMDEKTYE------KRMRIAEKKSYA 111
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 121 DFLQQYDAAHNVKL--PVRYDLcvcaSKDRAGHEASDVadwlkYVPGFEDDAKTpamlahpvtavsddgsavTPKILdqv 198
Cdd:PRK04250 112 DYALNFLIAGNCEKaeEIKADF----YKIFMGASTGGI-----FSENFEVDYAC------------------APGIV--- 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 199 leNVktsdlylieHCEhhDTGAVNEGPVSrelgvpgiPEDTELKIVARDIEAARRTGVHVHFQHVSTAISFEAIRKAkae 278
Cdd:PRK04250 162 --SV---------HAE--DPELIREFPER--------PPEAEVVAIERALEAGKKLKKPLHICHISTKDGLKLILKS--- 217
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 279 GLP-ITCETAPHYLALSDEALlKYGTLAKMNPPLRSEADRKATIAAIAdgTVDLLATDHAPHTLEEKELGfleAPnGIIG 357
Cdd:PRK04250 218 NLPwVSFEVTPHHLFLTRKDY-ERNPLLKVYPPLRSEEDRKALWENFS--KIPIIASDHAPHTLEDKEAG---AA-GIPG 290
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 358 LECAYGVCHKvLVDGGFISDERLIELMSVGPAELMGhaptdvaalVEDYaepaptgedpdgviageqvadaaesgasqre 437
Cdd:PRK04250 291 LETEVPLLLD-AANKGMISLFDIVEKMHDNPARIFG---------IKNY------------------------------- 329
                        410       420       430       440       450       460
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 489925976 438 gvnrllDFSHVDDAdavDLVVLDTAEEWTVDPEQFHSKARNTPFGGWQVTGRPLATII-GSKLM 500
Cdd:PRK04250 330 ------GIEEGNYA---NFAVFDMKKEWTIKAEELYTKAGWTPYEGFKLKGKVIMTILrGEVVM 384
PRK08044 PRK08044
allantoinase AllB;
41-393 1.43e-34

allantoinase AllB;


Pssm-ID: 169193 [Multi-domain]  Cd Length: 449  Bit Score: 134.98  E-value: 1.43e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976  41 IDATGLTLAPGFEDPHVHFRDPGQTYKESMVSGCRASASGGYTNVLIMP-NTLPAldgqTVTDAS------APGAKEVLD 113
Cdd:PRK08044  44 MDASGLVVSPGMVDAHTHISEPGRSHWEGYETGTRAAAKGGITTMIEMPlNQLPA----TVDRASielkfdAAKGKLTID 119
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 114 AG-------FDnvIDFLQQYDAAHNVKlpvrYDLCVCASKDRA-GHEASDVADWlkyvpGFEDDAKTPAMLAHPVtAVSD 185
Cdd:PRK08044 120 AAqlgglvsYN--LDRLHELDEVGVVG----FKCFVATCGDRGiDNDFRDVNDW-----QFYKGAQKLGELGQPV-LVHC 187
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 186 DGSAVTPKILDQvlenvktsdlyliehcehhdtgAVNEGPVSRELGVPGIPEDTELKIVARDIEAARRTGVHVHFQHVST 265
Cdd:PRK08044 188 ENALICDELGEE----------------------AKREGRVTAHDYVASRPVFTEVEAIRRVLYLAKVAGCRLHVCHISS 245
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 266 AISFEAIRKAKAEGLPITCETAPHYLALSDEALLKYGTLAKMNPPLRSEADRKATIAAIADGTVDLLATDHAPHTLEEKE 345
Cdd:PRK08044 246 PEGVEEVTRARQEGQDVTCESCPHYFVLDTDQFEEIGTLAKCSPPIRDLENQKGMWEKLFNGEIDCLVSDHSPCPPEMKA 325
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|..
gi 489925976 346 LGFLEAPNGIIGLECaygvCHKVLVDGGF----ISDERLIELMSVGPAELMG 393
Cdd:PRK08044 326 GNIMEAWGGIAGLQN----CMDVMFDEAVqkrgMSLPMFGKLMATNAADIFG 373
D-HYD cd01314
D-hydantoinases (D-HYD) also called dihydropyrimidases (DHPase) and related proteins; DHPases ...
41-501 4.32e-33

D-hydantoinases (D-HYD) also called dihydropyrimidases (DHPase) and related proteins; DHPases are a family of enzymes that catalyze the reversible hydrolytic ring opening of the amide bond in five- or six-membered cyclic diamides, like dihydropyrimidine or hydantoin. The hydrolysis of dihydropyrimidines is the second step of reductive catabolism of pyrimidines in human. The hydrolysis of 5-substituted hydantoins in microorganisms leads to enantiomerically pure N-carbamyl amino acids, which are used for the production of antibiotics, peptide hormones, pyrethroids, and pesticides. HYDs are classified depending on their stereoselectivity. This family also includes collapsin response regulators (CRMPs), cytosolic proteins involved in neuronal differentiation and axonal guidance which have strong homology to DHPases, but lack most of the active site residues.


Pssm-ID: 238639 [Multi-domain]  Cd Length: 447  Bit Score: 130.80  E-value: 4.32e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976  41 IDATGLTLAPGFEDPHVHFRDP--GQTYKESMVSGCRASASGGYTnvlimpntlpaldgqTVTDASAPGAKEVLDAGFDN 118
Cdd:cd01314   42 IDATGKYVLPGGIDPHTHLELPfmGTVTADDFESGTRAAAAGGTT---------------TIIDFAIPNKGQSLLEAVEK 106
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 119 VIDFlqqydAAHNVklpvrydlcVCaskDRAGHEAsdVADWlkyvpGFEDDAKTPAMLAHPVTAVS-----DDGSAVTPK 193
Cdd:cd01314  107 WRGK-----ADGKS---------VI---DYGFHMI--ITDW-----TDSVIEELPELVKKGISSFKvfmayKGLLMVDDE 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 194 ILDQVLENVKTSDLYLIEHCEHHD--------------TGAVNEgPVSRelgvpgiPEDTELKIVARDIEAARRTGVHVH 259
Cdd:cd01314  163 ELLDVLKRAKELGALVMVHAENGDviaelqkkllaqgkTGPEYH-ALSR-------PPEVEAEATARAIRLAELAGAPLY 234
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 260 FQHVSTAISFEAIRKAKAEGLPITCETAPHYLALSDEALLK---YGTLAKMNPPLRSEADRKATIAAIADGTVDLLATDH 336
Cdd:cd01314  235 IVHVSSKEAADEIARARKKGLPVYGETCPQYLLLDDSDYWKdwfEGAKYVCSPPLRPKEDQEALWDGLSSGTLQTVGSDH 314
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 337 APHTLEEKELG---FLEAPNGIIGLECAYGVCHKVLVDGGFISDERLIELMSVGPAELMGHAPTdvaalvedyaepaptg 413
Cdd:cd01314  315 CPFNFAQKARGkddFTKIPNGVPGVETRMPLLWSEGVAKGRITLEKFVELTSTNPAKIFGLYPR---------------- 378
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 414 edpDGVIAGeqVADAaesgasqregvnrlldfshvddadavDLVVLDTAEEWTVDPEQFHSKARNTPFGGWQVTGRPLAT 493
Cdd:cd01314  379 ---KGTIAV--GSDA--------------------------DLVIWDPNAEKTISADTHHHNVDYNIFEGMKVKGWPVVT 427

                 ....*...
gi 489925976 494 IIGSKLMF 501
Cdd:cd01314  428 ISRGKVVV 435
PLN02795 PLN02795
allantoinase
14-502 1.58e-31

allantoinase


Pssm-ID: 178392 [Multi-domain]  Cd Length: 505  Bit Score: 127.20  E-value: 1.58e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976  14 GEIIDLVVPGTAAAYFADTSSVVDGADidatgLTLAPGFEDPHVHFRDPGQTYKESMVSGCRASASGGYTNVLIMP-NTL 92
Cdd:PLN02795  68 GGRIVSVTKEEEAPKSQKKPHVLDYGN-----AVVMPGLIDVHVHLNEPGRTEWEGFPTGTKAAAAGGITTLVDMPlNSF 142
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976  93 PaldgqTVTDASApgakevldagfdnvidfLQQYDAAHNVKLPVrydlcvcaskdragheasDVADWLKYVPgfeDDAKT 172
Cdd:PLN02795 143 P-----STTSVET-----------------LELKIEAAKGKLYV------------------DVGFWGGLVP---ENAHN 179
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 173 PAMLAHPVTAVS------------DDGSAVTPKILDQVLENVKTSDLYLIEHCEHHDTGAVNEG----PVSRELGVPGIP 236
Cdd:PLN02795 180 ASVLEELLDAGAlglksfmcpsgiNDFPMTTATHIKAALPVLAKYGRPLLVHAEVVSPVESDSRldadPRSYSTYLKSRP 259
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 237 EDTELKIVARDIEAARRT-------GVHVHFQHVSTAI-SFEAIRKAKAEGLPITCETAPHYLALSDEALLKYGTLAKMN 308
Cdd:PLN02795 260 PSWEQEAIRQLLEVAKDTrpggvaeGAHVHIVHLSDAEsSLELIKEAKAKGDSVTVETCPHYLAFSAEEIPDGDTRYKCA 339
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 309 PPLRSEADRKATIAAIADGTVDLLATDHAPHTLEEK---ELGFLEAPNGIIGLECAYGVCHKVLVDGGfISDERLIELMS 385
Cdd:PLN02795 340 PPIRDAANRELLWKALLDGDIDMLSSDHSPSPPDLKlleEGNFLRAWGGISSLQFVLPATWTAGRAYG-LTLEQLARWWS 418
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 386 VGPAELmghaptdvaalvedyaepapTGEDPDGVIAgeqvadaaesgasqregvnrlldFSHvdDAdavDLVVLDTAEEW 465
Cdd:PLN02795 419 ERPAKL--------------------AGLDSKGAIA-----------------------PGK--DA---DIVVWDPEAEF 450
                        490       500       510       520
                 ....*....|....*....|....*....|....*....|
gi 489925976 466 TVD---PEQFHSKARnTPFGGWQVTGRPLATIIGSKLMFS 502
Cdd:PLN02795 451 VLDesyPIYHKHKSL-SPYLGTKLSGKVIATFVRGNLVFL 489
D-hydantoinase TIGR02033
D-hydantoinase; This model represents the D-hydantoinase (dihydropyrimidinase) which primarily ...
41-501 2.38e-31

D-hydantoinase; This model represents the D-hydantoinase (dihydropyrimidinase) which primarily converts 5,6-dihydrouracil to 3-ureidopropanoate but also acts on dihydrothymine and hydantoin. The enzyme is a metalloenzyme.


Pssm-ID: 273937 [Multi-domain]  Cd Length: 454  Bit Score: 125.96  E-value: 2.38e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976   41 IDATGLTLAPGFEDPHVHFRDP--GQTYKESMVSGCRASASGGYTNVLIMPNTLPaldGQTVTDASA-----PGAKEVLD 113
Cdd:TIGR02033  42 IDATGKYVLPGGIDVHTHLEMPfgGTTTADDFFTGTKAAAAGGTTTIIDFVVPEK---GSSLTEALEtwhekAEGKSVID 118
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976  114 AGFDNVIDflqqyDAAHNVKlpvrydlcvcaskdragheasdvadwlkyvpgfedDAKTPAMLAHPVTAVS-----DDGS 188
Cdd:TIGR02033 119 YGFHMDIT-----HWNDSVL-----------------------------------EEHIPEVKEEGINSFKvfmayKNLL 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976  189 AVTPKILDQVLENVKTSDLYLIEHCEHHDTGA------VNEG-------PVSRelgvpgiPEDTELKIVARDIEAARRTG 255
Cdd:TIGR02033 159 MVDDEELFEILKRLKELGALLQVHAENGDIIAelqarmLAQGitgpeyhALSR-------PPELEAEAVARAITLAALAD 231
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976  256 VHVHFQHVSTAISFEAIRKAKAEGLPITCETAPHYLALSDEALLKYGTLAK---MNPPLRSEADRKATIAAIADGTVDLL 332
Cdd:TIGR02033 232 APLYVVHVSTKDAADEIAQARKKGQPVFGETCPQYLVLDDTHYDKPGFEGAkyvCSPPLREPEDQDALWSALSSGALQTV 311
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976  333 ATDHAPHTLEEK-ELG---FLEAPNGIIGLECAYGVCHKVLVDGGFISDERLIELMSVGPAELMGHAPTdvaalvedyae 408
Cdd:TIGR02033 312 GSDHCTFNFAQKkAIGkddFTKIPNGGPGVEERMSLLFDEGVAKGRITLEKFVEVTSTNPAKIFNLYPR----------- 380
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976  409 paptgedpDGVIAgeqvadaaesgasqrEGvnrlldfshvddADAvDLVVLDTAEEWTVDPEQFHSKARNTPFGGWQVTG 488
Cdd:TIGR02033 381 --------KGTIA---------------VG------------SDA-DIVIWDPNRTTVISAETHHSNADYNPFEGFKVRG 424
                         490
                  ....*....|...
gi 489925976  489 RPLATIIGSKLMF 501
Cdd:TIGR02033 425 APVSVLSRGRVVV 437
PRK08323 PRK08323
phenylhydantoinase; Validated
1-494 7.42e-30

phenylhydantoinase; Validated


Pssm-ID: 236240 [Multi-domain]  Cd Length: 459  Bit Score: 121.82  E-value: 7.42e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976   1 MSITLRNIKVWNTGEIID---LVVPGTAAAYFADTSSVVdgadIDATGLTLAPGFEDPHVHFRDP--GQTYKESMVSGCR 75
Cdd:PRK08323   1 MSTLIKNGTVVTADDTYKadvLIEDGKIAAIGANLGDEV----IDATGKYVMPGGIDPHTHMEMPfgGTVSSDDFETGTR 76
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976  76 ASASGGYTnvlimpntlpaldgqTVTDASAPGAKEVLDAGfdnvidfLQQYD--AAHNvklpvrydlCVCaskDRAGHEA 153
Cdd:PRK08323  77 AAACGGTT---------------TIIDFALQPKGQSLREA-------LEAWHgkAAGK---------AVI---DYGFHMI 122
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 154 sdVADWlkyvpgfEDDAKT--PAMLAHPVTA-----------VSDDGSAVtpKILDQVLEN-----VktsdlylieHCEH 215
Cdd:PRK08323 123 --ITDW-------NEVVLDemPELVEEGITSfklfmaykgalMLDDDELL--RALQRAAELgalpmV---------HAEN 182
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 216 HD------TGAVNEG-------PVSRelgvpgiPEDTELKIVARDIEAARRTGVHVHFQHVSTAISFEAIRKAKAEGLPI 282
Cdd:PRK08323 183 GDaiaylqAKLLAEGktgpeyhALSR-------PPEVEGEATNRAIMLAELAGAPLYIVHVSCKEALEAIRRARARGQRV 255
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 283 TCETAPHYLALSDEALLKYGTL--AK--MNPPLRSEADRKATIAAIADGTVDLLATDHAPHTLE-EKELG---FLEAPNG 354
Cdd:PRK08323 256 FGETCPQYLLLDESEYDGPDWFegAKyvMSPPLRDKEHQDALWRGLQDGDLQVVATDHCPFCFEqKKQLGrgdFTKIPNG 335
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 355 IIGLECAYGVCHKVLVDGGFISDERLIELMSVGPAELMGHAPTdvaalvedyaepaptgedpDGVIAgeqvadaaesgas 434
Cdd:PRK08323 336 TPGVEDRMPLLFSEGVMTGRITLNRFVELTSTNPAKIFGLYPR-------------------KGTIA------------- 383
                        490       500       510       520       530       540
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 435 qrEGvnrlldfshvddADAvDLVVLDTAEEWTVDPEQFHSKARNTPFGGWQVTGRPLATI 494
Cdd:PRK08323 384 --VG------------ADA-DIVIWDPNATKTISASTLHSNVDYNPYEGFEVTGWPVTTL 428
pyrC PRK00369
dihydroorotase; Provisional
40-393 1.24e-24

dihydroorotase; Provisional


Pssm-ID: 234738 [Multi-domain]  Cd Length: 392  Bit Score: 105.61  E-value: 1.24e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976  40 DIDATGLTLA-PGFEDPHVHFRDPGQTYKESMVSGCRASASGGYTNVLIMPNTLPALDgqtvtdasapgAKEVLDAgfdn 118
Cdd:PRK00369  36 DLDLPQGTLIlPGAIDLHVHLRGLKLSYKEDVASGTSEAAYGGVTLVADMPNTIPPLN-----------TPEAITE---- 100
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 119 vidflqqydaahnvKLpvrydlcvcaskdrAGHEASDVADWLKYvPGFEDDAKTPAMLahPVTavsddGSAVTPKILDQ- 197
Cdd:PRK00369 101 --------------KL--------------AELEYYSRVDYFVY-SGVTKDPEKVDKL--PIA-----GYKIFPEDLERe 144
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 198 -VLENVKTSDLYLIEHCEHHDTGAVNegpvsRELGVPGIPEDTELKIVArdiEAARrtgvhVHFQHVStaiSFEAIRKAK 276
Cdd:PRK00369 145 eTFRVLLKSRKLKILHPEVPLALKSN-----RKLRRNCWYEIAALYYVK---DYQN-----VHITHAS---NPRTVRLAK 208
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 277 AEGLpiTCETAPHYLALSDEAllkyGTLAKMNPPLRSEADRKATIAAIADgtVDLLATDHAPHTLEEKELGFLEAPNGII 356
Cdd:PRK00369 209 ELGF--TVDITPHHLLVNGEK----DCLTKVNPPIRDINERLWLLQALSE--VDAIASDHAPHSSFEKLQPYEVCPPGIA 280
                        330       340       350
                 ....*....|....*....|....*....|....*..
gi 489925976 357 GLECAYGVCHKvLVDGGFISDERLIELMSVGPAELMG 393
Cdd:PRK00369 281 ALSFTPPFIYT-LVSKGILSIDRAVELISTNPARILG 316
PRK13404 PRK13404
dihydropyrimidinase; Provisional
40-494 2.13e-24

dihydropyrimidinase; Provisional


Pssm-ID: 184033 [Multi-domain]  Cd Length: 477  Bit Score: 105.94  E-value: 2.13e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976  40 DIDATGLTLAPGFEDPHVHFRDP---GQTYKESMVSGCRASASGGYTNVLimPNTLPAlDGQTVTDASA-----PGAKEV 111
Cdd:PRK13404  44 EIDATGRLVLPGGVDSHCHIDQPsgdGIMMADDFYTGTVSAAFGGTTTVI--PFAAQH-RGQSLREAVEdyhrrAAGKAV 120
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 112 LDAGFDNVI-----DFLQQydaahnvKLPVRYdlcvcaskdRAGHEASDVadWLKYvpgfeDDAKtpamlahpvtaVSDD 186
Cdd:PRK13404 121 IDYAFHLIVadpteEVLTE-------ELPALI---------AQGYTSFKV--FMTY-----DDLK-----------LDDR 166
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 187 GsavtpkILDqVLENVKTSDLYLIEHCEHHDTGA-VNEGPVSRELGVPGI-----PEDTELKIVARDIEAARRTGVHVHF 260
Cdd:PRK13404 167 Q------ILD-VLAVARRHGAMVMVHAENHDMIAwLTKRLLAAGLTAPKYhaisrPMLAEREATHRAIALAELVDVPILI 239
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 261 QHVSTAISFEAIRKAKAEGLPITCETAPHYLALSDEALLKYGTL-AKM--NPPLRSEADRKATIAAIADGTVDLLATDHA 337
Cdd:PRK13404 240 VHVSGREAAEQIRRARGRGLKIFAETCPQYLFLTAEDLDRPGMEgAKYicSPPPRDKANQEAIWNGLADGTFEVFSSDHA 319
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 338 PHTLEE--------KELGFLEAPNGIIGLECAYGVCHKVLVDGGFISDERLIELMSVGPAELMGHAPtdvaalvedyaep 409
Cdd:PRK13404 320 PFRFDDtdgklaagANPSFKAIANGIPGIETRLPLLFSEGVVKGRISLNRFVALTSTNPAKLYGLYP------------- 386
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 410 aptgedpdgviageqvadaaesgasqREGvnrlldfSHVDDADAvDLVVLDTAEEWTVDPEQFHSKARNTPFGGWQVTGR 489
Cdd:PRK13404 387 --------------------------RKG-------AIAIGADA-DIAIWDPDREVTITNADLHHAADYTPYEGMRVTGW 432

                 ....*
gi 489925976 490 PLATI 494
Cdd:PRK13404 433 PVTVL 437
PRK01211 PRK01211
dihydroorotase; Provisional
50-393 6.19e-23

dihydroorotase; Provisional


Pssm-ID: 179247 [Multi-domain]  Cd Length: 409  Bit Score: 100.70  E-value: 6.19e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976  50 PGFEDPHVHFRDPGQTYKESMVSGCRASASGGYTNVLIMPNTLPAldgqtVTDASAPGAKEVLDAGFDNViDF-LQQYDA 128
Cdd:PRK01211  46 PAATDIHVHFRTPGETEKEDFSTGTLSAIFGGTTFIMDMPNNNIP-----IKDYNAFSDKLGRVAPKAYV-DFsLYSMET 119
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 129 AHNVKLPvrydlcvcaskdragheasdvadwlkyvpgfedDAKTPAMLAHPVTAVSDDGSAVTpkilDQVLENVKTSDLY 208
Cdd:PRK01211 120 GNNALIL---------------------------------DERSIGLKVYMGGTTNTNGTDIE----GGEIKKINEANIP 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 209 LIEHCE------HHDTGAVN--EGPVSRelgvpgiPEDTELKIVARDIEAARRTGVHVHFQHVSTAISFeairkakaegl 280
Cdd:PRK01211 163 VFFHAElseclrKHQFESKNlrDHDLAR-------PIECEIKAVKYVKNLDLKTKIIAHVSSIDVIGRF----------- 224
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 281 piTCETAPHYLALSDEALLkyGTLAKMNPPLRSEADRKATIAAIADGTVDLLATDHAPHTlEEKELGFLEAPNGIIGLEc 360
Cdd:PRK01211 225 --LREVTPHHLLLNDDMPL--GSYGKVNPPLRDRWTQERLLEEYISGRFDILSSDHAPHT-EEDKQEFEYAKSGIIGVE- 298
                        330       340       350
                 ....*....|....*....|....*....|...
gi 489925976 361 AYGVCHKVLVDGGFISDERLIELMSVGPAELMG 393
Cdd:PRK01211 299 TRVPLFLALVKKKILPLDVLYKTAIERPASLFG 331
CAD_DHOase cd01316
The eukaryotic CAD protein is a trifunctional enzyme of carbamoylphosphate ...
50-344 7.09e-20

The eukaryotic CAD protein is a trifunctional enzyme of carbamoylphosphate synthetase-aspartate transcarbamoylase-dihydroorotase, which catalyzes the first three steps of de novo pyrimidine nucleotide biosynthesis. Dihydroorotase (DHOase) catalyzes the third step, the reversible interconversion of carbamoyl aspartate to dihydroorotate.


Pssm-ID: 238641 [Multi-domain]  Cd Length: 344  Bit Score: 90.97  E-value: 7.09e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976  50 PGFEDPHVHFRDPGQTYKESMVSGCRASASGGYTNVLIMPNTLPAldgqTVTDASAPGAKEVLDAGfdnvidflqqydaA 129
Cdd:cd01316    6 PGLIDVHVHLREPGATHKEDFASGTKAALAGGFTMVRAMPNTNPS----IVDVASLKLVQSLAQAK-------------A 68
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 130 HnvklpVRYDLCVCASKDRAgHEASDVAD---WLKYVPgFEDDAktpamlahpvTAVSDDGSAVTPKIldqvleNVKTSD 206
Cdd:cd01316   69 R-----CDYAFSIGATSTNA-ATVGELASeavGLKFYL-NETFS----------TLILDKITAWASHF------NAWPST 125
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 207 LYLIEHCEHHDTGAVnegpvsrelgvpgipedtelkivardIEAARRTGVHVHFQHVSTAISFEAIRKAKAEGLPITCET 286
Cdd:cd01316  126 KPIVTHAKSQTLAAV--------------------------LLLASLHNRSIHICHVSSKEEINLIRLAKARGLKVTCEV 179
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 489925976 287 APHYLALSDEALLKygTLAKMNPPLRSEADRKATIAAIAdgTVDLLATDHAPHTLEEK 344
Cdd:cd01316  180 SPHHLFLSQDDLPR--GQYEVRPFLPTREDQEALWENLD--YIDCFATDHAPHTLAEK 233
PLN02942 PLN02942
dihydropyrimidinase
19-501 5.19e-16

dihydropyrimidinase


Pssm-ID: 178530  Cd Length: 486  Bit Score: 80.27  E-value: 5.19e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976  19 LVVPGTAAAYFADTSSVVDGADIDATGLTLAPGFEDPHVHFRDP--GQTYKESMVSGCRASASGGYTnvLIMPNTLPAlD 96
Cdd:PLN02942  26 YVEDGIIVAVAPNLKVPDDVRVIDATGKFVMPGGIDPHTHLAMPfmGTETIDDFFSGQAAALAGGTT--MHIDFVIPV-N 102
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976  97 GQTVTDASA---PGAKEVLDAGFDNVIDFLQQyDAAHNVKLPVRYdlcvcaskdragHEASDVADWLKYvpgfeddaKTP 173
Cdd:PLN02942 103 GNLLAGYEAyekKAEKSCMDYGFHMAITKWDD-TVSRDMETLVKE------------KGINSFKFFMAY--------KGS 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 174 AMlahpvtavsddgsaVTPKILDQVLENVKTSDLYLIEHCEHHDtgAVNEGPvSR--ELGVPGI-------PEDTELKIV 244
Cdd:PLN02942 162 LM--------------VTDELLLEGFKRCKSLGALAMVHAENGD--AVFEGQ-KRmiELGITGPeghalsrPPLLEGEAT 224
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 245 ARDIEAARRTGVHVHFQHVSTAISFEAIRKAKAEGLPITCETAPHYLALSDEALLK--YGTLAK--MNPPLRSEADRKAT 320
Cdd:PLN02942 225 ARAIRLAKFVNTPLYVVHVMSIDAMEEIARARKSGQRVIGEPVVSGLVLDDSKLWDpdFTIASKyvMSPPIRPAGHGKAL 304
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 321 IAAIADGTVDLLATDHAPHTLEEKELG---FLEAPNGIIGLECAYGVCHKVLVDGGFISDERLIELMSVGPAELMGHAPT 397
Cdd:PLN02942 305 QAALSSGILQLVGTDHCPFNSTQKAFGkddFRKIPNGVNGIEERMHLVWDTMVESGQISPTDYVRVTSTECAKIFNIYPR 384
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 398 DVAalvedyaepaptgedpdgVIAGeqvADAaesgasqregvnrlldfshvddadavDLVVLDTAEEWTVDPEQFHSKAR 477
Cdd:PLN02942 385 KGA------------------ILAG---SDA--------------------------DIIILNPNSTFTISAKTHHSRID 417
                        490       500
                 ....*....|....*....|....
gi 489925976 478 NTPFGGWQVTGRPLATIIGSKLMF 501
Cdd:PLN02942 418 TNVYEGRRGKGKVEVTISQGRVVW 441
D-aminoacylase cd01297
D-aminoacylases (N-acyl-D-Amino acid amidohydrolases) catalyze the hydrolysis of ...
14-299 1.13e-09

D-aminoacylases (N-acyl-D-Amino acid amidohydrolases) catalyze the hydrolysis of N-acyl-D-amino acids to produce the corresponding D-amino acids, which are used as intermediates in the synthesis of pesticides, bioactive peptides, and antibiotics.


Pssm-ID: 238622 [Multi-domain]  Cd Length: 415  Bit Score: 60.39  E-value: 1.13e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976  14 GEIIDlvvPGTAAAYFAD------------TSSVVDGAD-IDATGLTLAPGFEDPHVH-----FRDPGQtykesmvsgcR 75
Cdd:cd01297    7 GTVVD---GTGAPPFTADvgirdgriaaigPILSTSAREvIDAAGLVVAPGFIDVHTHydgqvFWDPDL----------R 73
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976  76 ASASGGYTNVLIM-------PNTLPALDGQTVTDASAPGAKEVLDAGFDNVIDFLQQYDAAhnvklpvRYDLCVCASkdr 148
Cdd:cd01297   74 PSSRQGVTTVVLGncgvspaPANPDDLARLIMLMEGLVALGEGLPWGWATFAEYLDALEAR-------PPAVNVAAL--- 143
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 149 AGHEASDVADWlkyvpGFEDDAKTPAMLAHpvtavsddgsavTPKILDQVLE----NVKTSDLYLieHCEHHDTGAVNE- 223
Cdd:cd01297  144 VGHAALRRAVM-----GLDAREATEEELAK------------MRELLREALEagalGISTGLAYA--PRLYAGTAELVAl 204
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 224 -GPVSRELGV----PGIPEDTELKIVARDIEAARRTGVHVHFQH--VSTAISFEA-------IRKAKAEGLPITCETAPh 289
Cdd:cd01297  205 aRVAARYGGVyqthVRYEGDSILEALDELLRLGRETGRPVHISHlkSAGAPNWGKidrllalIEAARAEGLQVTADVYP- 283
                        330
                 ....*....|
gi 489925976 290 YLALSDEALL 299
Cdd:cd01297  284 YGAGSEDDVR 293
Amidohydro_1 pfam01979
Amidohydrolase family; This family of enzymes are a a large metal dependent hydrolase ...
47-393 5.20e-08

Amidohydrolase family; This family of enzymes are a a large metal dependent hydrolase superfamily. The family includes Adenine deaminase EC:3.5.4.2 that hydrolyses adenine to form hypoxanthine and ammonia. Adenine deaminases reaction is important for adenine utilization as a purine and also as a nitrogen source. This family also includes dihydroorotase and N-acetylglucosamine-6-phosphate deacetylases, EC:3.5.1.25 These enzymes catalyze the reaction N-acetyl-D-glucosamine 6-phosphate + H2O <=> D-glucosamine 6-phosphate + acetate. This family includes the catalytic domain of urease alpha subunit. Dihydroorotases (EC:3.5.2.3) are also included.


Pssm-ID: 460401 [Multi-domain]  Cd Length: 334  Bit Score: 54.82  E-value: 5.20e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976   47 TLAPGFEDPHVHFRD--------PGQTYKESMVSGCRASASGGYTNVLIMPNTlpaldgqtvTDASAPGAKEvldagfdn 118
Cdd:pfam01979   1 IVLPGLIDAHVHLEMgllrgipvPPEFAYEALRLGITTMLKSGTTTVLDMGAT---------TSTGIEALLE-------- 63
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976  119 vidflqqydAAHNVKLPVRYDLCVCaSKDRAGHEASDVADWLKYVPGFE------DDAKTPAMLAHPVTAVSDDGsavtp 192
Cdd:pfam01979  64 ---------AAEELPLGLRFLGPGC-SLDTDGELEGRKALREKLKAGAEfikgmaDGVVFVGLAPHGAPTFSDDE----- 128
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976  193 kiLDQVLENVKTSDLYLIEHCEHHD-TGAVNEGPVSRELGVPGIPEDTELKIVARDIEAARRTGVHVHfqhvstaisfea 271
Cdd:pfam01979 129 --LKAALEEAKKYGLPVAIHALETKgEVEDAIAAFGGGIEHGTHLEVAESGGLLDIIKLILAHGVHLS------------ 194
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976  272 irkakaeglpitcetaPHYLALSDEALLKYGTLAKMNPPLRSEADRKATIAAIADGTVDLLATDHAPHTleeKELGFLEa 351
Cdd:pfam01979 195 ----------------PTEANLLAEHLKGAGVAHCPFSNSKLRSGRIALRKALEDGVKVGLGTDGAGSG---NSLNMLE- 254
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|..
gi 489925976  352 pngiiglECAYGVcHKVLVDGGFISDERLIELMSVGPAELMG 393
Cdd:pfam01979 255 -------ELRLAL-ELQFDPEGGLSPLEALRMATINPAKALG 288
DHOase cd01294
Dihydroorotase (DHOase) catalyzes the reversible interconversion of carbamoyl aspartate to ...
180-345 9.46e-06

Dihydroorotase (DHOase) catalyzes the reversible interconversion of carbamoyl aspartate to dihydroorotate, a key reaction in the pyrimidine biosynthesis. In contrast to the large polyfunctional CAD proteins of higher organisms, this group of DHOases is monofunctional and mainly dimeric.


Pssm-ID: 238619  Cd Length: 335  Bit Score: 47.66  E-value: 9.46e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 180 VTAVSDDGSAVTPKILdQVLENVKTSDLYLIEHCEHHDtgaVNEGPVSRELGVPGIPED-----TELKIVardieaarrt 254
Cdd:cd01294  101 ATTNSQGGVTDLEKIY-PVLEAMQKLGMPLLVHGEVPD---FKIDVLDREAKFIPVLEPlaqrfPKLKIV---------- 166
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489925976 255 gvhvhFQHVSTAISFEAIRKAKAE-GLPITcetaPHYLALSDEALLKYGtlakMNP-----P-LRSEADRKATIAAIADG 327
Cdd:cd01294  167 -----LEHITTADAVEYVKSCNENvAATIT----PHHLLLTRDDLLGGG----LNPhlyckPvAKRPEDREALRKAATSG 233
                        170
                 ....*....|....*....
gi 489925976 328 TVDL-LATDHAPHTLEEKE 345
Cdd:cd01294  234 HPKFfLGSDSAPHPKSNKE 252
AdeC COG1001
Adenine deaminase [Nucleotide transport and metabolism];
5-59 3.61e-03

Adenine deaminase [Nucleotide transport and metabolism];


Pssm-ID: 440625 [Multi-domain]  Cd Length: 559  Bit Score: 40.08  E-value: 3.61e-03
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 489925976   5 LRNIKVWN--TGEII--DLVVpgtAAAYFADTSSVVDGAD--IDATGLTLAPGFEDPHVHF 59
Cdd:COG1001    9 IKNGRLVNvfTGEILegDIAI---AGGRIAGVGDYIGEATevIDAAGRYLVPGFIDGHVHI 66
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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