|
Name |
Accession |
Description |
Interval |
E-value |
| PRK11728 |
PRK11728 |
L-2-hydroxyglutarate oxidase; |
1-393 |
0e+00 |
|
L-2-hydroxyglutarate oxidase;
Pssm-ID: 183292 [Multi-domain] Cd Length: 393 Bit Score: 733.16 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489936396 1 MYDFVIIGGGIIGMSTAMQLIDVYPDARIALLEKESGPACHQTGHNSGVIHAGVYYTPGSLKAQFCLAGNRATKAFCDQN 80
Cdd:PRK11728 2 MYDFVIIGGGIVGLSTAMQLQERYPGARIAVLEKESGPARHQTGHNSGVIHAGVYYTPGSLKARFCRRGNEATKAFCDQH 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489936396 81 GIRYDVCGKMLVATSPLEMERMRALWDRTAANGLEREWLNAQELREREPNITGLGGIFVPSSGIVSYREVTAAMANIFQA 160
Cdd:PRK11728 82 GIPYEECGKLLVATSELELERMEALYERARANGIEVERLDAEELREREPNIRGLGAIFVPSTGIVDYRAVAEAMAELIQA 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489936396 161 KGGEIIYNAEVSALKEHATGVIVHTRQGqEYEGATLISCSGLMADRLVKMLGVEPGFIICPFRGEYFRLAPEHNQIVNHL 240
Cdd:PRK11728 162 RGGEIRLGAEVTALDEHANGVVVRTTQG-EYEARTLINCAGLMSDRLAKMAGLEPDFRIVPFRGEYYRLAPEKNQLVNHL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489936396 241 IYPIPDPAMPFLGVHLTRMIDGSVTVGPNAVLAFKREGYRKRDFSLSDTLEILGSSGIRRVLQNNLRSGLGEMKNSLCKS 320
Cdd:PRK11728 241 IYPVPDPAFPFLGVHLTRMIDGSVTVGPNAVLAFKREGYRKRDFSLRDLLEILTYPGFWKLAQKHWRSGLGEMKNSLSKS 320
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 489936396 321 GYLRLVQKYCPSLTLKDLQPWPAGVRAQAVSPDGKLIDDFLFVTTPRSIHTCNAPSPAATSAIPIGAHIVSKV 393
Cdd:PRK11728 321 GYLRLVQKYCPSLTLSDLQPYPAGVRAQAVSRDGKLVDDFLFVETPRSLHVCNAPSPAATSSLPIGEHIVSKV 393
|
|
| LhgO |
COG0579 |
L-2-hydroxyglutarate oxidase LhgO [Carbohydrate transport and metabolism]; |
15-405 |
2.99e-162 |
|
L-2-hydroxyglutarate oxidase LhgO [Carbohydrate transport and metabolism];
Pssm-ID: 440344 [Multi-domain] Cd Length: 418 Bit Score: 462.69 E-value: 2.99e-162
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489936396 15 STAMQLIDvYPDARIALLEKESGPACHQTGHNSGVIHAGVYYTPGSLKAQFCLAGNRATKAFCDQNGIRYDVCGKMLVAT 94
Cdd:COG0579 18 ALARELSR-YEDLKVLVLEKEDDVAQESSGNNSGVIHAGLYYTPGSLKARLCVEGNELFYELCRELGIPFKRCGKLVVAT 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489936396 95 SPLEMERMRALWDRTAANGLER-EWLNAQELREREPNIT--GLGGIFVPSSGIVSYREVTAAMANIFQAKGGEIIYNAEV 171
Cdd:COG0579 97 GEEEVAFLEKLYERGKANGVPGlEILDREELRELEPLLSdeGVAALYSPSTGIVDPGALTRALAENAEANGVELLLNTEV 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489936396 172 SALKEHATGVIVHTRQGqEYEGATLISCSGLMADRLVKMLGVEPGFIICPFRGEYFRLAPEHNqIVNHLIYPIPDPAMPF 251
Cdd:COG0579 177 TGIEREGDGWEVTTNGG-TIRARFVINAAGLYADRLAQMAGIGKDFGIFPVKGEYLVLDKPAE-LVNAKVYPVPDPGAPF 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489936396 252 LGVHLTRMIDGSVTVGPNAVLAFKREGyrkrdfSLSDTLEILGSSGIRRVLQNNLRSGLGEMKNSLCKSGYLRLVQKYCP 331
Cdd:COG0579 255 LGVHLTRTIDGNLLFGPNAVFVPKKED------SLLDLFESLRFPNFWPMLAKNLLTKYLESVTSLSKEAFLEALRKYVP 328
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 489936396 332 SLTLKDLQPWPAGVRAQAVSPDGklidDFLFVTT--PRSIHTCNAPSPAATSAIPIGAHIVSKVHALLE-NQSNPGR 405
Cdd:COG0579 329 ELPDEDLIPAFAGIRAQIIKPDG----DFVIEEAddPGSIHVLGIESPGATSALAIAEHVAELLPEKLEeKDWQPKR 401
|
|
| DAO |
pfam01266 |
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: ... |
15-390 |
4.34e-47 |
|
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase EC:1.1.99.5, Sarcosine oxidase beta subunit EC:1.5.3.1, D-alanine oxidase EC:1.4.99.1, D-aspartate oxidase EC:1.4.3.1.
Pssm-ID: 426168 [Multi-domain] Cd Length: 339 Bit Score: 164.49 E-value: 4.34e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489936396 15 STAMQLIDvyPDARIALLEKESGPACHQTGHNSGVIHAGVYYTPGSLKAQFCLAGNRATKAFCDQNGIRYDV--CGKMLV 92
Cdd:pfam01266 13 STAYELAR--RGLSVTLLERGDDPGSGASGRNAGLIHPGLRYLEPSELARLALEALDLWEELEEELGIDCGFrrCGVLVL 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489936396 93 ATSPlEMERMRALWDRTAANGLEREWLNAQELREREPNITGL-GGIFVPSSGIVSYREVTAAMANIFQAKGGEIIYNAEV 171
Cdd:pfam01266 91 ARDE-EEEALEKLLAALRRLGVPAELLDAEELRELEPLLPGLrGGLFYPDGGHVDPARLLRALARAAEALGVRIIEGTEV 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489936396 172 SALKEHATGVIVHTrqgqEYEGATLISCSGLMADrLVKMLGVEPgfIICPFRGEYFRLAPEHNqivNHLIYPIPDPAMPF 251
Cdd:pfam01266 170 TGIEEEGGVWGVVT----TGEADAVVNAAGAWAD-LLALPGLRL--PVRPVRGQVLVLEPLPE---ALLILPVPITVDPG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489936396 252 LGVHLTRMIDGSVTVGPNAVLafkrEGYRKRDFSLSDTLEIlgssgirrvlqnnlrsglgemknslcksgyLRLVQKYCP 331
Cdd:pfam01266 240 RGVYLRPRADGRLLLGGTDEE----DGFDDPTPDPEEIEEL------------------------------LEAARRLFP 285
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 489936396 332 SLTlKDLQPWpAGVRAqavSPDGKLIDDFLfvTTPRSIHTCNAPSPAATSAIPIGAHIV 390
Cdd:pfam01266 286 ALA-DIERAW-AGLRP---LPDGLPIIGRP--GSPGLYLATGHGGHGLTLAPGIGKLLA 337
|
|
| thiamin_ThiO |
TIGR02352 |
glycine oxidase ThiO; This family consists of the homotetrameric, FAD-dependent glycine ... |
82-242 |
1.40e-09 |
|
glycine oxidase ThiO; This family consists of the homotetrameric, FAD-dependent glycine oxidase ThiO, from species such as Bacillus subtilis that use glycine in thiamine biosynthesis. In general, members of this family will not be found in species such as E. coli that instead use tyrosine and the ThiH protein. [Biosynthesis of cofactors, prosthetic groups, and carriers, Thiamine]
Pssm-ID: 274092 [Multi-domain] Cd Length: 337 Bit Score: 59.30 E-value: 1.40e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489936396 82 IRYDVCGKMLVATSPLEMERMRALWDRTAANGLEREWLNAQELREREPNITG--LGGIFVPSSGIVSYREVTAAMANIFQ 159
Cdd:TIGR02352 69 TGYHQCGTLVVAFDEDDVEHLRQLADLQSATGMEVEWLSGRALRRLEPYLSGgiRGAVFYPDDAHVDPRALLKALEKALE 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489936396 160 AKGGEIIYNAEVSALK---EHATGVIvhTRQGQeYEGATLISCSGLMADRLVkmlgvepGFIICPFRGEYFRL----APE 232
Cdd:TIGR02352 149 KLGVEIIEHTEVQHIEirgEKVTAIV--TPSGD-VQADQVVLAAGAWAGELL-------PLPLRPVRGQPLRLeapaVPL 218
|
170
....*....|
gi 489936396 233 HNQIVNHLIY 242
Cdd:TIGR02352 219 LNRPLRAVVY 228
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| PRK11728 |
PRK11728 |
L-2-hydroxyglutarate oxidase; |
1-393 |
0e+00 |
|
L-2-hydroxyglutarate oxidase;
Pssm-ID: 183292 [Multi-domain] Cd Length: 393 Bit Score: 733.16 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489936396 1 MYDFVIIGGGIIGMSTAMQLIDVYPDARIALLEKESGPACHQTGHNSGVIHAGVYYTPGSLKAQFCLAGNRATKAFCDQN 80
Cdd:PRK11728 2 MYDFVIIGGGIVGLSTAMQLQERYPGARIAVLEKESGPARHQTGHNSGVIHAGVYYTPGSLKARFCRRGNEATKAFCDQH 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489936396 81 GIRYDVCGKMLVATSPLEMERMRALWDRTAANGLEREWLNAQELREREPNITGLGGIFVPSSGIVSYREVTAAMANIFQA 160
Cdd:PRK11728 82 GIPYEECGKLLVATSELELERMEALYERARANGIEVERLDAEELREREPNIRGLGAIFVPSTGIVDYRAVAEAMAELIQA 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489936396 161 KGGEIIYNAEVSALKEHATGVIVHTRQGqEYEGATLISCSGLMADRLVKMLGVEPGFIICPFRGEYFRLAPEHNQIVNHL 240
Cdd:PRK11728 162 RGGEIRLGAEVTALDEHANGVVVRTTQG-EYEARTLINCAGLMSDRLAKMAGLEPDFRIVPFRGEYYRLAPEKNQLVNHL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489936396 241 IYPIPDPAMPFLGVHLTRMIDGSVTVGPNAVLAFKREGYRKRDFSLSDTLEILGSSGIRRVLQNNLRSGLGEMKNSLCKS 320
Cdd:PRK11728 241 IYPVPDPAFPFLGVHLTRMIDGSVTVGPNAVLAFKREGYRKRDFSLRDLLEILTYPGFWKLAQKHWRSGLGEMKNSLSKS 320
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 489936396 321 GYLRLVQKYCPSLTLKDLQPWPAGVRAQAVSPDGKLIDDFLFVTTPRSIHTCNAPSPAATSAIPIGAHIVSKV 393
Cdd:PRK11728 321 GYLRLVQKYCPSLTLSDLQPYPAGVRAQAVSRDGKLVDDFLFVETPRSLHVCNAPSPAATSSLPIGEHIVSKV 393
|
|
| LhgO |
COG0579 |
L-2-hydroxyglutarate oxidase LhgO [Carbohydrate transport and metabolism]; |
15-405 |
2.99e-162 |
|
L-2-hydroxyglutarate oxidase LhgO [Carbohydrate transport and metabolism];
Pssm-ID: 440344 [Multi-domain] Cd Length: 418 Bit Score: 462.69 E-value: 2.99e-162
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489936396 15 STAMQLIDvYPDARIALLEKESGPACHQTGHNSGVIHAGVYYTPGSLKAQFCLAGNRATKAFCDQNGIRYDVCGKMLVAT 94
Cdd:COG0579 18 ALARELSR-YEDLKVLVLEKEDDVAQESSGNNSGVIHAGLYYTPGSLKARLCVEGNELFYELCRELGIPFKRCGKLVVAT 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489936396 95 SPLEMERMRALWDRTAANGLER-EWLNAQELREREPNIT--GLGGIFVPSSGIVSYREVTAAMANIFQAKGGEIIYNAEV 171
Cdd:COG0579 97 GEEEVAFLEKLYERGKANGVPGlEILDREELRELEPLLSdeGVAALYSPSTGIVDPGALTRALAENAEANGVELLLNTEV 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489936396 172 SALKEHATGVIVHTRQGqEYEGATLISCSGLMADRLVKMLGVEPGFIICPFRGEYFRLAPEHNqIVNHLIYPIPDPAMPF 251
Cdd:COG0579 177 TGIEREGDGWEVTTNGG-TIRARFVINAAGLYADRLAQMAGIGKDFGIFPVKGEYLVLDKPAE-LVNAKVYPVPDPGAPF 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489936396 252 LGVHLTRMIDGSVTVGPNAVLAFKREGyrkrdfSLSDTLEILGSSGIRRVLQNNLRSGLGEMKNSLCKSGYLRLVQKYCP 331
Cdd:COG0579 255 LGVHLTRTIDGNLLFGPNAVFVPKKED------SLLDLFESLRFPNFWPMLAKNLLTKYLESVTSLSKEAFLEALRKYVP 328
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 489936396 332 SLTLKDLQPWPAGVRAQAVSPDGklidDFLFVTT--PRSIHTCNAPSPAATSAIPIGAHIVSKVHALLE-NQSNPGR 405
Cdd:COG0579 329 ELPDEDLIPAFAGIRAQIIKPDG----DFVIEEAddPGSIHVLGIESPGATSALAIAEHVAELLPEKLEeKDWQPKR 401
|
|
| DAO |
pfam01266 |
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: ... |
15-390 |
4.34e-47 |
|
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase EC:1.1.99.5, Sarcosine oxidase beta subunit EC:1.5.3.1, D-alanine oxidase EC:1.4.99.1, D-aspartate oxidase EC:1.4.3.1.
Pssm-ID: 426168 [Multi-domain] Cd Length: 339 Bit Score: 164.49 E-value: 4.34e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489936396 15 STAMQLIDvyPDARIALLEKESGPACHQTGHNSGVIHAGVYYTPGSLKAQFCLAGNRATKAFCDQNGIRYDV--CGKMLV 92
Cdd:pfam01266 13 STAYELAR--RGLSVTLLERGDDPGSGASGRNAGLIHPGLRYLEPSELARLALEALDLWEELEEELGIDCGFrrCGVLVL 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489936396 93 ATSPlEMERMRALWDRTAANGLEREWLNAQELREREPNITGL-GGIFVPSSGIVSYREVTAAMANIFQAKGGEIIYNAEV 171
Cdd:pfam01266 91 ARDE-EEEALEKLLAALRRLGVPAELLDAEELRELEPLLPGLrGGLFYPDGGHVDPARLLRALARAAEALGVRIIEGTEV 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489936396 172 SALKEHATGVIVHTrqgqEYEGATLISCSGLMADrLVKMLGVEPgfIICPFRGEYFRLAPEHNqivNHLIYPIPDPAMPF 251
Cdd:pfam01266 170 TGIEEEGGVWGVVT----TGEADAVVNAAGAWAD-LLALPGLRL--PVRPVRGQVLVLEPLPE---ALLILPVPITVDPG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489936396 252 LGVHLTRMIDGSVTVGPNAVLafkrEGYRKRDFSLSDTLEIlgssgirrvlqnnlrsglgemknslcksgyLRLVQKYCP 331
Cdd:pfam01266 240 RGVYLRPRADGRLLLGGTDEE----DGFDDPTPDPEEIEEL------------------------------LEAARRLFP 285
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 489936396 332 SLTlKDLQPWpAGVRAqavSPDGKLIDDFLfvTTPRSIHTCNAPSPAATSAIPIGAHIV 390
Cdd:pfam01266 286 ALA-DIERAW-AGLRP---LPDGLPIIGRP--GSPGLYLATGHGGHGLTLAPGIGKLLA 337
|
|
| DadA |
COG0665 |
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism]; |
27-267 |
9.49e-33 |
|
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];
Pssm-ID: 440429 [Multi-domain] Cd Length: 364 Bit Score: 126.56 E-value: 9.49e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489936396 27 ARIALLEKEsGPACHQTGHNSGVIHAGvYYTPGSLK-AQFCLAGNRATKAFCDQNGIRYDV--CGKMLVATSPLEMERMR 103
Cdd:COG0665 26 LDVTVLERG-RPGSGASGRNAGQLRPG-LAALADRAlVRLAREALDLWRELAAELGIDCDFrrTGVLYLARTEAELAALR 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489936396 104 ALWDRTAANGLEREWLNAQELREREPNITG---LGGIFVPSSGIVSYREVTAAMANIFQAKGGEIIYNAEVSALKEHATG 180
Cdd:COG0665 104 AEAEALRALGLPVELLDAAELREREPGLGSpdyAGGLYDPDDGHVDPAKLVRALARAARAAGVRIREGTPVTGLEREGGR 183
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489936396 181 VI-VHTRQGqEYEGATLISCSGLMADRLVKMLGVEPGfiICPFRGEYFRLAPEHNQIVNHLIYPipdpampfLGVHLTRM 259
Cdd:COG0665 184 VTgVRTERG-TVRADAVVLAAGAWSARLLPMLGLRLP--LRPVRGYVLVTEPLPDLPLRPVLDD--------TGVYLRPT 252
|
....*...
gi 489936396 260 IDGSVTVG 267
Cdd:COG0665 253 ADGRLLVG 260
|
|
| thiamin_ThiO |
TIGR02352 |
glycine oxidase ThiO; This family consists of the homotetrameric, FAD-dependent glycine ... |
82-242 |
1.40e-09 |
|
glycine oxidase ThiO; This family consists of the homotetrameric, FAD-dependent glycine oxidase ThiO, from species such as Bacillus subtilis that use glycine in thiamine biosynthesis. In general, members of this family will not be found in species such as E. coli that instead use tyrosine and the ThiH protein. [Biosynthesis of cofactors, prosthetic groups, and carriers, Thiamine]
Pssm-ID: 274092 [Multi-domain] Cd Length: 337 Bit Score: 59.30 E-value: 1.40e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489936396 82 IRYDVCGKMLVATSPLEMERMRALWDRTAANGLEREWLNAQELREREPNITG--LGGIFVPSSGIVSYREVTAAMANIFQ 159
Cdd:TIGR02352 69 TGYHQCGTLVVAFDEDDVEHLRQLADLQSATGMEVEWLSGRALRRLEPYLSGgiRGAVFYPDDAHVDPRALLKALEKALE 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489936396 160 AKGGEIIYNAEVSALK---EHATGVIvhTRQGQeYEGATLISCSGLMADRLVkmlgvepGFIICPFRGEYFRL----APE 232
Cdd:TIGR02352 149 KLGVEIIEHTEVQHIEirgEKVTAIV--TPSGD-VQADQVVLAAGAWAGELL-------PLPLRPVRGQPLRLeapaVPL 218
|
170
....*....|
gi 489936396 233 HNQIVNHLIY 242
Cdd:TIGR02352 219 LNRPLRAVVY 228
|
|
| mnmC |
PRK01747 |
bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent ... |
13-208 |
3.92e-08 |
|
bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC;
Pssm-ID: 234978 [Multi-domain] Cd Length: 662 Bit Score: 55.24 E-value: 3.92e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489936396 13 GMSTAMQLIdvypdAR---IALLEKESGPACHQTGHnsgviHAGVYYT----PGSLKAQFCLAGNRATKAFCDQN----- 80
Cdd:PRK01747 272 GAALALALA-----RRgwqVTLYEADEAPAQGASGN-----RQGALYPllskDDNALSRFFRAAFLFARRFYDALpaagv 341
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489936396 81 GIRYDVCGKMLVATSPLEMERMRALWDRTAANGLEReWLNAQELREREPNITGLGGIFVPSSGIVSYREVTAAMANIFQA 160
Cdd:PRK01747 342 AFDHDWCGVLQLAWDEKSAEKIAKMLALGLPAELAR-ALDAEEAEELAGLPVPCGGIFYPQGGWLCPAELCRALLALAGQ 420
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 489936396 161 kGGEIIYNAEVSALKEHATGVIVHTRQGQEYEGATLISCSGLMADRLV 208
Cdd:PRK01747 421 -QLTIHFGHEVARLEREDDGWQLDFAGGTLASAPVVVLANGHDAARFA 467
|
|
| PTZ00383 |
PTZ00383 |
malate:quinone oxidoreductase; Provisional |
28-383 |
6.25e-08 |
|
malate:quinone oxidoreductase; Provisional
Pssm-ID: 240393 [Multi-domain] Cd Length: 497 Bit Score: 54.74 E-value: 6.25e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489936396 28 RIALLEKESGPA--CHQTGHNSGVIHAG---VYYTPGS---LKAQFCLAGNRATKAFCDQNGIRYDVCGKMLVATSPLEM 99
Cdd:PTZ00383 72 KIALIERRSDFAlvASHGKNNSQTIHCGdieTNYTLEKarkVKRQADMLRNYLTKLPPSERDSIIFKMQKMVLGVGEKEC 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489936396 100 ERMRALWDRTAANGLEREWLNAQELREREPNIT----------GLGGIFVPSS-GIVSYREVT------AAMANIFQAKG 162
Cdd:PTZ00383 152 EFLEKRYPVFKELFPSMQLLDKKEIHRVEPRVVlknnhtlreePLAALYVPNElTTVDYQKLSesfvkhARRDALVPGKK 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489936396 163 GEIIYNAEVSALKE-HATGVIVHTRQGQEYEGATLISCSG--LMadrLVKMLGVEPGFIICPFRGEYFrLAPEhnqIVNH 239
Cdd:PTZ00383 232 ISINLNTEVLNIERsNDSLYKIHTNRGEIRARFVVVSACGysLL---FAQKMGYGLEYSCLPVAGSFY-FSGN---ILNG 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489936396 240 LIYPIPDPAMPFLGVHLTRMI--DGSVTVGPNAVLAFKREGYRKRdfSLSDTL--------------EILGSSGIRRVLq 303
Cdd:PTZ00383 305 KVYTVQNPALPFAAVHGDPDIiaKGKTRFGPTALPLPLLERYNMS--SLPDFLkvwnpdlnllavyfDLFKDSTMRKYV- 381
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489936396 304 nnLRSGLGEMKnSLCKSGYLRLVQKYCPSLTLKDLQPWPA--GVRAQAVSPDG-KLIDDFLFVTTPRSIHTCNAPSPAAT 380
Cdd:PTZ00383 382 --LRNFLFEVP-LLNKYLFLKDARKIVPSLTRKDLRYCVGygGVRPQLIDKVSkKLLLGEGKIDPGKGIIFNITPSPGAT 458
|
...
gi 489936396 381 SAI 383
Cdd:PTZ00383 459 TCL 461
|
|
| PRK12409 |
PRK12409 |
D-amino acid dehydrogenase small subunit; Provisional |
110-212 |
1.65e-07 |
|
D-amino acid dehydrogenase small subunit; Provisional
Pssm-ID: 237093 [Multi-domain] Cd Length: 410 Bit Score: 53.10 E-value: 1.65e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489936396 110 AANGLEREWLNAQELREREPNITG--LGGIFVPSSGIVSYREVTAAMANIFQAKGGEIIYNAEVSALKEHATGVIVHTRQ 187
Cdd:PRK12409 157 AEGGLERRAVTPEEMRAIEPTLTGeyYGGYYTPSDSTGDIHKFTTGLAAACARLGVQFRYGQEVTSIKTDGGGVVLTVQP 236
|
90 100 110
....*....|....*....|....*....|
gi 489936396 188 GQEY-----EGATLISCSGLMADRLVKMLG 212
Cdd:PRK12409 237 SAEHpsrtlEFDGVVVCAGVGSRALAAMLG 266
|
|
| solA |
PRK11259 |
N-methyl-L-tryptophan oxidase; |
113-212 |
6.36e-07 |
|
N-methyl-L-tryptophan oxidase;
Pssm-ID: 236887 [Multi-domain] Cd Length: 376 Bit Score: 50.99 E-value: 6.36e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489936396 113 GLEREWLNAQELREREPNIT---GLGGIFVPSSGIVSYREVTAAMANIFQAKGGEIIYNAEVSALKEHATGVIVHTRQGq 189
Cdd:PRK11259 111 GLPHEVLDAAEIRRRFPQFRlpdGYIALFEPDGGFLRPELAIKAHLRLAREAGAELLFNEPVTAIEADGDGVTVTTADG- 189
|
90 100
....*....|....*....|...
gi 489936396 190 EYEGATLISCSGLMADRLVKMLG 212
Cdd:PRK11259 190 TYEAKKLVVSAGAWVKDLLPPLE 212
|
|
| UbiH |
COG0654 |
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme ... |
99-265 |
7.76e-06 |
|
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme transport and metabolism, Energy production and conversion]; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases is part of the Pathway/BioSystem: Ubiquinone biosynthesis
Pssm-ID: 440419 [Multi-domain] Cd Length: 326 Bit Score: 47.63 E-value: 7.76e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489936396 99 MERMRAL--WDRTAANGLE------REWLNAQELREREPNITGLGGIFvpssgIVSYREVTAAMANIFQAKGGEIIYNAE 170
Cdd:COG0654 52 LELLRRLglWDRLLARGAPirgirvRDGSDGRVLARFDAAETGLPAGL-----VVPRADLERALLEAARALGVELRFGTE 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489936396 171 VSALKEHATGVIVHTRQGQEYEGATLISCSGL------MADRLVKMLGVEPGFIICPFRGEYFRLAPEHNQIVNHLIYPI 244
Cdd:COG0654 127 VTGLEQDADGVTVTLADGRTLRADLVVGADGArsavrrLLGIGFTGRDYPQRALWAGVRTELRARLAAAGPRLGELLELS 206
|
170 180
....*....|....*....|.
gi 489936396 245 PDPAMPFLGVHLTRMIDGSVT 265
Cdd:COG0654 207 PRSAFPLRRRRAERWRRGRVV 227
|
|
| soxA_mon |
TIGR01377 |
sarcosine oxidase, monomeric form; Sarcosine oxidase catalyzes the oxidative demethylation of ... |
113-214 |
3.60e-05 |
|
sarcosine oxidase, monomeric form; Sarcosine oxidase catalyzes the oxidative demethylation of sarcosine to glycine. The reaction converts tetrahydrofolate to 5,10-methylene-tetrahydrofolate. The enzyme is known in monomeric and heterotetrameric (alpha,beta,gamma,delta) forms [Energy metabolism, Amino acids and amines]
Pssm-ID: 130444 [Multi-domain] Cd Length: 380 Bit Score: 45.59 E-value: 3.60e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489936396 113 GLEREWLNAQELREREPNIT---GLGGIFVPSSGIVSYREVTAAMANIFQAKGGEIIYNAEVSALKEHAtGVIVHTRQGQ 189
Cdd:TIGR01377 107 GLEHELLSSKQLKQRFPNIRvprNEVGLLDPNGGVLYAEKALRALQELAEAHGATVRDGTKVVEIEPTE-LLVTVKTTKG 185
|
90 100
....*....|....*....|....*
gi 489936396 190 EYEGATLISCSGLMADRLVKMLGVE 214
Cdd:TIGR01377 186 SYQANKLVVTAGAWTSKLLSPLGIE 210
|
|
| PRK08010 |
PRK08010 |
pyridine nucleotide-disulfide oxidoreductase; Provisional |
148-198 |
1.28e-03 |
|
pyridine nucleotide-disulfide oxidoreductase; Provisional
Pssm-ID: 181196 [Multi-domain] Cd Length: 441 Bit Score: 40.77 E-value: 1.28e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 489936396 148 REVTAAMANIFQAKGGEIIYNAEVSALKEHATGVIVHTRQGQEYEGATLIS 198
Cdd:PRK08010 199 RDIADNIATILRDQGVDIILNAHVERISHHENQVQVHSEHAQLAVDALLIA 249
|
|
| COG1233 |
COG1233 |
Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and ... |
135-198 |
1.56e-03 |
|
Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and catabolism];
Pssm-ID: 440846 [Multi-domain] Cd Length: 491 Bit Score: 40.60 E-value: 1.56e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 489936396 135 GGIFVPSSGIvsyREVTAAMANIFQAKGGEIIYNAEVSAL---KEHATGviVHTRQGQEYEGATLIS 198
Cdd:COG1233 212 GGVWYPKGGM---GALADALARLAEELGGEIRTGAEVERIlveGGRATG--VRLADGEEIRADAVVS 273
|
|
| Amino_oxidase |
pfam01593 |
Flavin containing amine oxidoreductase; This family consists of various amine oxidases, ... |
135-202 |
4.76e-03 |
|
Flavin containing amine oxidoreductase; This family consists of various amine oxidases, including maze polyamine oxidase (PAO)and various flavin containing monoamine oxidases (MAO). The aligned region includes the flavin binding site of these enzymes. The family also contains phytoene dehydrogenases and related enzymes. In vertebrates MAO plays an important role regulating the intracellular levels of amines via there oxidation; these include various neurotransmitters, neurotoxins and trace amines. In lower eukaryotes such as aspergillus and in bacteria the main role of amine oxidases is to provide a source of ammonium. PAOs in plants, bacteria and protozoa oxidase spermidine and spermine to an aminobutyral, diaminopropane and hydrogen peroxide and are involved in the catabolism of polyamines. Other members of this family include tryptophan 2-monooxygenase, putrescine oxidase, corticosteroid binding proteins and antibacterial glycoproteins.
Pssm-ID: 396255 [Multi-domain] Cd Length: 446 Bit Score: 39.01 E-value: 4.76e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 489936396 135 GGIFVPSSGivsYREVTAAMANifQAKGGEIIYNAEVSALKEHATGVIVHTRQGQEYEGATLISCSGL 202
Cdd:pfam01593 196 GSLLLPRGG---LGALPDALAA--QLLGGDVRLNTRVRSIDREGDGVTVTLTDGEVIEADAVIVTVPL 258
|
|
| FixC |
COG0644 |
Dehydrogenase (flavoprotein) [Energy production and conversion]; |
144-216 |
9.86e-03 |
|
Dehydrogenase (flavoprotein) [Energy production and conversion];
Pssm-ID: 440409 [Multi-domain] Cd Length: 281 Bit Score: 37.64 E-value: 9.86e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 489936396 144 IVSYREVTAAMANIFQAKGGEIIYNAEVSALKEHATGVIVHTRQGQEYEGATLISCSGlMADRLVKMLGVEPG 216
Cdd:COG0644 82 VVDRARFDRWLAEQAEEAGAEVRTGTRVTDVLRDDGRVVVRTGDGEEIRADYVVDADG-ARSLLARKLGLKRR 153
|
|
| |
