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Concise Results
Standard Results
Full Results
MULTISPECIES: peptidoglycan glycosyltransferase FtsI [Enterobacter]
Protein Classification
peptidoglycan glycosyltransferase FtsI ( domain architecture ID 11487651 )
peptidoglycan glycosyltransferase FtsI is an essential cell division protein that catalyzes cross-linking of the peptidoglycan cell wall at the division septum
List of domain hits
Name
Accession
Description
Interval
E-value
PRK15105
PRK15105 peptidoglycan synthase FtsI; Provisional
2-579
0e+00
peptidoglycan synthase FtsI; Provisional
Pssm-ID: 185060 [Multi-domain]
Cd Length: 578
Bit Score: 1269.36
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489953054 2 KAAAKT L K P KRQEEQANF V SWRFALLCGCILLAL G FLLGRVAWLQ I I A PDMLVR Q GDMRSLRVQEVSTSRGMITDRSGRP 81
Cdd:PRK15105 1 KAAAKT Q K L KRQEEQANF I SWRFALLCGCILLAL V FLLGRVAWLQ V I N PDMLVR E GDMRSLRVQEVSTSRGMITDRSGRP 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489953054 82 LAVSVPVKAIWADPKE L HDAGGI TL D N RWKAL S DAL KM PLDQL AS R V NANPKGRFIYLARQVNPDMADYIKKLKLPGIHL 161
Cdd:PRK15105 81 LAVSVPVKAIWADPKE V HDAGGI SV D D RWKAL A DAL NI PLDQL SA R I NANPKGRFIYLARQVNPDMADYIKKLKLPGIHL 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489953054 162 REESRRYYPSGEVTAHLIGFTNVDSQGIEGVEKSFDKWLTGQPGERIVRKDRYGRVIEDISSTDSQAAHNLALSIDERLQ 241
Cdd:PRK15105 161 REESRRYYPSGEVTAHLIGFTNVDSQGIEGVEKSFDKWLTGQPGERIVRKDRYGRVIEDISSTDSQAAHNLALSIDERLQ 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489953054 242 ALVYRELNNAVAFNKAESGSAVLVDV A TGEVLAMA S SPSYNPNN FA GT A KDAMRNR S ITDVFEPGSTVKPMVVMTALQRG 321
Cdd:PRK15105 241 ALVYRELNNAVAFNKAESGSAVLVDV N TGEVLAMA N SPSYNPNN LS GT P KDAMRNR A ITDVFEPGSTVKPMVVMTALQRG 320
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489953054 322 I V N EN T VLNT I PYRINGHEIKDVARYSELTLTGVLQKSSNVGVSKLALAMPSSALVDTYSRFGLGKATNLGLVGERSGLY 401
Cdd:PRK15105 321 V V K EN S VLNT V PYRINGHEIKDVARYSELTLTGVLQKSSNVGVSKLALAMPSSALVDTYSRFGLGKATNLGLVGERSGLY 400
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489953054 402 PQKQRWSDIERATFSFGYGLMVTPLQLARVYATIGSYGIYRPLSITKVDPPVPGERVFPESIVRTVVHMMESVALPGGGG 481
Cdd:PRK15105 401 PQKQRWSDIERATFSFGYGLMVTPLQLARVYATIGSYGIYRPLSITKVDPPVPGERVFPESIVRTVVHMMESVALPGGGG 480
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489953054 482 VKAAIKGYRIAIKTGTAKKVGPDGRYINKYIAYTAGVAPAS N PRFALVVVINDPQAGKYYGGAVSAPVFGAIMGGVLRTM 561
Cdd:PRK15105 481 VKAAIKGYRIAIKTGTAKKVGPDGRYINKYIAYTAGVAPAS Q PRFALVVVINDPQAGKYYGGAVSAPVFGAIMGGVLRTM 560
570
....*....|....*...
gi 489953054 562 NIEPDAL A TG E K S EFVIN 579
Cdd:PRK15105 561 NIEPDAL P TG D K N EFVIN 578
Name
Accession
Description
Interval
E-value
PRK15105
PRK15105 peptidoglycan synthase FtsI; Provisional
2-579
0e+00
peptidoglycan synthase FtsI; Provisional
Pssm-ID: 185060 [Multi-domain]
Cd Length: 578
Bit Score: 1269.36
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489953054 2 KAAAKT L K P KRQEEQANF V SWRFALLCGCILLAL G FLLGRVAWLQ I I A PDMLVR Q GDMRSLRVQEVSTSRGMITDRSGRP 81
Cdd:PRK15105 1 KAAAKT Q K L KRQEEQANF I SWRFALLCGCILLAL V FLLGRVAWLQ V I N PDMLVR E GDMRSLRVQEVSTSRGMITDRSGRP 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489953054 82 LAVSVPVKAIWADPKE L HDAGGI TL D N RWKAL S DAL KM PLDQL AS R V NANPKGRFIYLARQVNPDMADYIKKLKLPGIHL 161
Cdd:PRK15105 81 LAVSVPVKAIWADPKE V HDAGGI SV D D RWKAL A DAL NI PLDQL SA R I NANPKGRFIYLARQVNPDMADYIKKLKLPGIHL 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489953054 162 REESRRYYPSGEVTAHLIGFTNVDSQGIEGVEKSFDKWLTGQPGERIVRKDRYGRVIEDISSTDSQAAHNLALSIDERLQ 241
Cdd:PRK15105 161 REESRRYYPSGEVTAHLIGFTNVDSQGIEGVEKSFDKWLTGQPGERIVRKDRYGRVIEDISSTDSQAAHNLALSIDERLQ 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489953054 242 ALVYRELNNAVAFNKAESGSAVLVDV A TGEVLAMA S SPSYNPNN FA GT A KDAMRNR S ITDVFEPGSTVKPMVVMTALQRG 321
Cdd:PRK15105 241 ALVYRELNNAVAFNKAESGSAVLVDV N TGEVLAMA N SPSYNPNN LS GT P KDAMRNR A ITDVFEPGSTVKPMVVMTALQRG 320
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489953054 322 I V N EN T VLNT I PYRINGHEIKDVARYSELTLTGVLQKSSNVGVSKLALAMPSSALVDTYSRFGLGKATNLGLVGERSGLY 401
Cdd:PRK15105 321 V V K EN S VLNT V PYRINGHEIKDVARYSELTLTGVLQKSSNVGVSKLALAMPSSALVDTYSRFGLGKATNLGLVGERSGLY 400
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489953054 402 PQKQRWSDIERATFSFGYGLMVTPLQLARVYATIGSYGIYRPLSITKVDPPVPGERVFPESIVRTVVHMMESVALPGGGG 481
Cdd:PRK15105 401 PQKQRWSDIERATFSFGYGLMVTPLQLARVYATIGSYGIYRPLSITKVDPPVPGERVFPESIVRTVVHMMESVALPGGGG 480
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489953054 482 VKAAIKGYRIAIKTGTAKKVGPDGRYINKYIAYTAGVAPAS N PRFALVVVINDPQAGKYYGGAVSAPVFGAIMGGVLRTM 561
Cdd:PRK15105 481 VKAAIKGYRIAIKTGTAKKVGPDGRYINKYIAYTAGVAPAS Q PRFALVVVINDPQAGKYYGGAVSAPVFGAIMGGVLRTM 560
570
....*....|....*...
gi 489953054 562 NIEPDAL A TG E K S EFVIN 579
Cdd:PRK15105 561 NIEPDAL P TG D K N EFVIN 578
FtsI
COG0768 Cell division protein FtsI, peptidoglycan transpeptidase (Penicillin-binding protein 2) [Cell ...
11-562
0e+00
Cell division protein FtsI, peptidoglycan transpeptidase (Penicillin-binding protein 2) [Cell cycle control, cell division, chromosome partitioning, Cell wall/membrane/envelope biogenesis];
Pssm-ID: 440531 [Multi-domain]
Cd Length: 568
Bit Score: 623.00
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489953054 11 KR QE E QAN F v SW R FA LL CGCI LL ALGF L L GR VAW LQ IIAP D MLVRQGDMRSL R VQEVSTS RG M I T DR S G RP LA VS VPV KA 90
Cdd:COG0768 2 KR KK E KRL F - RR R LL LL FLLV LL LFLL L V GR LFY LQ VVEG D EYAELAEENRI R TVPIPAP RG L I Y DR N G NV LA TN VPV YS 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489953054 91 IW ADP K E LH D aggit LDNRWKA L SDA L KMPLDQ L ASRVNAN p KGRFI YL A R QVN P DM A DY I KK LKLPG IHLRE E SR RYYP 170
Cdd:COG0768 81 LY ADP E E VK D ----- PEETAEK L AKL L GLDPEE L RKKLKKK - SRFPV YL K R NLS P EE A AR I RA LKLPG VYVEA E YK RYYP 154
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489953054 171 S GE VT AH LI G FTNV ---- D SQ G IE G V EK SFDKW L T G Q PG E R I V RK D RY GRVI E D ISS - TDSQAAHN L A L S ID ER LQ ALVY 245
Cdd:COG0768 155 Y GE LA AH VL G YVGE ingg D GI G KS G L EK AYEDL L R G T PG K R R V EV D AR GRVI R D LGE e KPPVPGKD L V L T ID SD LQ KIAE 234
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489953054 246 RE L NN AV AFN KA E SG SA V LV D VA TGE V LAMAS S PS YN PN N F A G TAKDAM RNR SITDVF EPGST V KP MVVMT AL QR G IVNE 325
Cdd:COG0768 235 EA L KK AV EEY KA K SG AV V VM D PK TGE I LAMAS Y PS FD PN L F V G GPDEPL RNR AVQGTY EPGST F KP FTAAA AL EE G VITP 314
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489953054 326 N T VLN - TIP YR IN G HE I K D -- VARYSE LTLT GV L Q KSSNVG VS KLAL AMPSSA L V D TYSR FGLG KA T NLG L V GE R SGL Y P 402
Cdd:COG0768 315 D T TFD c PGY YR VG G RT I R D wd RGGHGT LTLT EA L A KSSNVG FY KLAL RLGIDK L Y D YLKK FGLG QK T GID L P GE A SGL L P 394
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489953054 403 QKQ RW SDI E R AT F S F G Y GL M VTPLQLA RV YA T I GSY G IYRPLSIT K ---------- VDP P VPGE RV FPESIVR TV VHM ME 472
Cdd:COG0768 395 SPK RW YPG E T AT M S I G Q GL S VTPLQLA QA YA A I ANG G VLVKPHLV K eivdpdgevv KEE P EVLR RV ISPETAE TV REG ME 474
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489953054 473 S V AL - PGG GGVK AAI K GYR I A I KTGTA KK V GP - D G R Y I - NKY IA YTA G V APA S NPR F A LV VV IND P Q a G KY YGG A V S APV 549
Cdd:COG0768 475 G V VN e PGG TARR AAI P GYR V A G KTGTA QV V DI g N G G Y Y k GRH IA SFV G F APA D NPR Y A VA VV VEN P G - G GA YGG T V A APV 553
570
....*....|...
gi 489953054 550 F GA IM GGV LR TMN 562
Cdd:COG0768 554 F RE IM EAY LR LLG 566
pbp2_mrdA
TIGR03423 penicillin-binding protein 2; Members of this protein family are penicillin-binding protein 2 ...
23-554
6.16e-99
penicillin-binding protein 2; Members of this protein family are penicillin-binding protein 2 (PBP-2), a protein whose gene (designated pbpA or mrdA) generally is found next to the gene for RodA, a protein required for rod (bacillus) shape in many bacteria. PBP-2 acts as a transpeptidase for cell elongation (hence, rod-shape). [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]
Pssm-ID: 274573 [Multi-domain]
Cd Length: 592
Bit Score: 312.92
E-value: 6.16e-99
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489953054 23 R FAL L C G CI L LAL G F L LG R VAW LQ I I APDMLVRQGDMRSL R VQEVSTS RG M I T DR S G RP LA VSV P VKAIWAD P KELH D ag 102
Cdd:TIGR03423 2 R ALV L G G LV L ALF G V L AA R LFY LQ V I RGEEYATLSEDNRI R LVPIPPP RG L I L DR N G VL LA DNR P SFSLEIV P EKVD D -- 79
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489953054 103 git LD NRWKA L SDA L KMPLDQL A --- SRVNANPKGRF I Y L ARQVNPDMADYI -- KKLK LPG IHLREESR RYYP S GE VT AH 177
Cdd:TIGR03423 80 --- LD ATLDR L AKL L DLDPEDI A rfl KELKRSRRFEP I P L KSDLTEEEVARF av NQYR LPG VEIEARLK RYYP Y GE LA AH 156
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489953054 178 LI G FTN - VDSQGI E ---------------- G V EK SFDKW L T G Q PG E R I V RKDRY GRVI EDI S STDSQAAHN L A L S ID E RL 240
Cdd:TIGR03423 157 VL G YVG e INEEDL E rlepanyaggdyigks G I EK YYEDE L R G K PG Y R E V EVNAR GRVI RTL S RVPPVPGKD L V L T ID A RL 236
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489953054 241 Q ALVYRE L nnavafn KAES G SA V LV D VA TGE V LAM A S S PS YN PN N F AG -- TA KD A ---------- MR NR S I TD V FE PGST 308
Cdd:TIGR03423 237 Q QAAEKA L ------- GGRR G AV V VM D PR TGE I LAM V S T PS FD PN L F VD gi SS KD Y kallndpdrp LL NR A I QG V YP PGST 309
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489953054 309 V KP M V VMT AL QR G IVNEN T VLNTIP - YRIN G HEIKDVA R -- YSELT L TGVLQK S SN V GVSK LAL AMPSSALVDTYS RFG L 385
Cdd:TIGR03423 310 F KP V V ALA AL EE G VITPE T RIYCPG y FQLG G RRFRCWK R gg HGRVD L RKAIEE S CD V YFYQ LAL RLGIDKIAEYAK RFG F 389
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489953054 386 G KA T NLG L V GE R SGL Y P -------- QK Q R W SDIE ra T FSFGY G --- LM VTPLQLA RVY A TIGSY G - I Y R P ---------- 443
Cdd:TIGR03423 390 G QK T GID L P GE K SGL V P srewkrkr FG Q P W YPGD -- T LNVSI G qgy VL VTPLQLA VAT A ALANG G k L Y K P hlvksiedpd 467
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489953054 444 - LSITKVD P P V PGERVFPESIVRT V VHM M ES V A - L PGG GGVK A AI - KG Y RI A I KTGTA KK V GP -- DGR Y INKY I AYT --- 515
Cdd:TIGR03423 468 g GVVRRTE P E V LRPLPISPENLDV V REG M RD V V n G PGG TARR A RL g LP Y KM A G KTGTA QV V SL kq GEK Y DAEQ I PER lrd 547
570 580 590 600
....*....|....*....|....*....|....*....|...
gi 489953054 516 ---- AGV AP AS NP RF A LV V VIN dp QA G ky Y G GAVS AP VFGA IM 554
Cdd:TIGR03423 548 half VAF AP YD NP KI A VA V IVE -- HG G -- G G SSAA AP IARK IM 586
Transpeptidase
pfam00905 Penicillin binding protein transpeptidase domain; The active site serine (residue 337 in Swiss: ...
260-554
7.42e-96
Penicillin binding protein transpeptidase domain; The active site serine (residue 337 in Swiss:P14677) is conserved in all members of this family.
Pssm-ID: 425939 [Multi-domain]
Cd Length: 296
Bit Score: 294.71
E-value: 7.42e-96
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489953054 260 GSAV LV D VA TGEVLAM ASS PSY N PN N F agta KDAM RNR SI T DVF EPGST V KP MVVMT AL QR G IVNENTVLNTI P YRI - N G 338
Cdd:pfam00905 1 GSAV VL D PK TGEVLAM VGK PSY D PN G F ---- IGPL RNR AV T SRY EPGST F KP FTALA AL DN G VLKPDETIFDW P GKQ q G G 76
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489953054 339 HE I K D -- VARYSEL TL TGV L QK SSN VGVS KLA LAMPSSA L VDTYSR FG L G KA T NL GL V GE RS G L yp QKQR W sd I E R AT F S 416
Cdd:pfam00905 77 KS I G D wn QDQVGIG TL RQA L EY SSN WYMQ KLA QKLGADK L RSYLKK FG Y G NK T GI GL P GE NA G Y -- LTPY W -- L E G AT A S 152
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489953054 417 FG Y GL MV TPLQ L A RV YA T I GSY G IYR P LSIT K ----- VDP P V PGERVFPE S IVRT V VH M MES V ALP G G G GVK AA IK GY RI 491
Cdd:pfam00905 153 FG I GL TI TPLQ Q A QA YA A I ANG G KLV P PHLV K siedk VDP K V LNKLPISK S TAEK V KD M LRL V VND G T G TGT AA VP GY KV 232
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 489953054 492 A I KTGTA KKV GP D G R -- Y INKY I AYTA G V APA S NP RF A LV V V I N DP Q ag K YYGG A V S AP V F GA I M 554
Cdd:pfam00905 233 A G KTGTA QVA GP K G G gy Y DGAQ I GWFV G Y APA D NP KY A FA V L I D DP K -- R YYGG K V A AP I F KD I L 295
Name
Accession
Description
Interval
E-value
PRK15105
PRK15105 peptidoglycan synthase FtsI; Provisional
2-579
0e+00
peptidoglycan synthase FtsI; Provisional
Pssm-ID: 185060 [Multi-domain]
Cd Length: 578
Bit Score: 1269.36
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489953054 2 KAAAKT L K P KRQEEQANF V SWRFALLCGCILLAL G FLLGRVAWLQ I I A PDMLVR Q GDMRSLRVQEVSTSRGMITDRSGRP 81
Cdd:PRK15105 1 KAAAKT Q K L KRQEEQANF I SWRFALLCGCILLAL V FLLGRVAWLQ V I N PDMLVR E GDMRSLRVQEVSTSRGMITDRSGRP 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489953054 82 LAVSVPVKAIWADPKE L HDAGGI TL D N RWKAL S DAL KM PLDQL AS R V NANPKGRFIYLARQVNPDMADYIKKLKLPGIHL 161
Cdd:PRK15105 81 LAVSVPVKAIWADPKE V HDAGGI SV D D RWKAL A DAL NI PLDQL SA R I NANPKGRFIYLARQVNPDMADYIKKLKLPGIHL 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489953054 162 REESRRYYPSGEVTAHLIGFTNVDSQGIEGVEKSFDKWLTGQPGERIVRKDRYGRVIEDISSTDSQAAHNLALSIDERLQ 241
Cdd:PRK15105 161 REESRRYYPSGEVTAHLIGFTNVDSQGIEGVEKSFDKWLTGQPGERIVRKDRYGRVIEDISSTDSQAAHNLALSIDERLQ 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489953054 242 ALVYRELNNAVAFNKAESGSAVLVDV A TGEVLAMA S SPSYNPNN FA GT A KDAMRNR S ITDVFEPGSTVKPMVVMTALQRG 321
Cdd:PRK15105 241 ALVYRELNNAVAFNKAESGSAVLVDV N TGEVLAMA N SPSYNPNN LS GT P KDAMRNR A ITDVFEPGSTVKPMVVMTALQRG 320
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489953054 322 I V N EN T VLNT I PYRINGHEIKDVARYSELTLTGVLQKSSNVGVSKLALAMPSSALVDTYSRFGLGKATNLGLVGERSGLY 401
Cdd:PRK15105 321 V V K EN S VLNT V PYRINGHEIKDVARYSELTLTGVLQKSSNVGVSKLALAMPSSALVDTYSRFGLGKATNLGLVGERSGLY 400
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489953054 402 PQKQRWSDIERATFSFGYGLMVTPLQLARVYATIGSYGIYRPLSITKVDPPVPGERVFPESIVRTVVHMMESVALPGGGG 481
Cdd:PRK15105 401 PQKQRWSDIERATFSFGYGLMVTPLQLARVYATIGSYGIYRPLSITKVDPPVPGERVFPESIVRTVVHMMESVALPGGGG 480
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489953054 482 VKAAIKGYRIAIKTGTAKKVGPDGRYINKYIAYTAGVAPAS N PRFALVVVINDPQAGKYYGGAVSAPVFGAIMGGVLRTM 561
Cdd:PRK15105 481 VKAAIKGYRIAIKTGTAKKVGPDGRYINKYIAYTAGVAPAS Q PRFALVVVINDPQAGKYYGGAVSAPVFGAIMGGVLRTM 560
570
....*....|....*...
gi 489953054 562 NIEPDAL A TG E K S EFVIN 579
Cdd:PRK15105 561 NIEPDAL P TG D K N EFVIN 578
FtsI
COG0768 Cell division protein FtsI, peptidoglycan transpeptidase (Penicillin-binding protein 2) [Cell ...
11-562
0e+00
Cell division protein FtsI, peptidoglycan transpeptidase (Penicillin-binding protein 2) [Cell cycle control, cell division, chromosome partitioning, Cell wall/membrane/envelope biogenesis];
Pssm-ID: 440531 [Multi-domain]
Cd Length: 568
Bit Score: 623.00
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489953054 11 KR QE E QAN F v SW R FA LL CGCI LL ALGF L L GR VAW LQ IIAP D MLVRQGDMRSL R VQEVSTS RG M I T DR S G RP LA VS VPV KA 90
Cdd:COG0768 2 KR KK E KRL F - RR R LL LL FLLV LL LFLL L V GR LFY LQ VVEG D EYAELAEENRI R TVPIPAP RG L I Y DR N G NV LA TN VPV YS 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489953054 91 IW ADP K E LH D aggit LDNRWKA L SDA L KMPLDQ L ASRVNAN p KGRFI YL A R QVN P DM A DY I KK LKLPG IHLRE E SR RYYP 170
Cdd:COG0768 81 LY ADP E E VK D ----- PEETAEK L AKL L GLDPEE L RKKLKKK - SRFPV YL K R NLS P EE A AR I RA LKLPG VYVEA E YK RYYP 154
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489953054 171 S GE VT AH LI G FTNV ---- D SQ G IE G V EK SFDKW L T G Q PG E R I V RK D RY GRVI E D ISS - TDSQAAHN L A L S ID ER LQ ALVY 245
Cdd:COG0768 155 Y GE LA AH VL G YVGE ingg D GI G KS G L EK AYEDL L R G T PG K R R V EV D AR GRVI R D LGE e KPPVPGKD L V L T ID SD LQ KIAE 234
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489953054 246 RE L NN AV AFN KA E SG SA V LV D VA TGE V LAMAS S PS YN PN N F A G TAKDAM RNR SITDVF EPGST V KP MVVMT AL QR G IVNE 325
Cdd:COG0768 235 EA L KK AV EEY KA K SG AV V VM D PK TGE I LAMAS Y PS FD PN L F V G GPDEPL RNR AVQGTY EPGST F KP FTAAA AL EE G VITP 314
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489953054 326 N T VLN - TIP YR IN G HE I K D -- VARYSE LTLT GV L Q KSSNVG VS KLAL AMPSSA L V D TYSR FGLG KA T NLG L V GE R SGL Y P 402
Cdd:COG0768 315 D T TFD c PGY YR VG G RT I R D wd RGGHGT LTLT EA L A KSSNVG FY KLAL RLGIDK L Y D YLKK FGLG QK T GID L P GE A SGL L P 394
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489953054 403 QKQ RW SDI E R AT F S F G Y GL M VTPLQLA RV YA T I GSY G IYRPLSIT K ---------- VDP P VPGE RV FPESIVR TV VHM ME 472
Cdd:COG0768 395 SPK RW YPG E T AT M S I G Q GL S VTPLQLA QA YA A I ANG G VLVKPHLV K eivdpdgevv KEE P EVLR RV ISPETAE TV REG ME 474
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489953054 473 S V AL - PGG GGVK AAI K GYR I A I KTGTA KK V GP - D G R Y I - NKY IA YTA G V APA S NPR F A LV VV IND P Q a G KY YGG A V S APV 549
Cdd:COG0768 475 G V VN e PGG TARR AAI P GYR V A G KTGTA QV V DI g N G G Y Y k GRH IA SFV G F APA D NPR Y A VA VV VEN P G - G GA YGG T V A APV 553
570
....*....|...
gi 489953054 550 F GA IM GGV LR TMN 562
Cdd:COG0768 554 F RE IM EAY LR LLG 566
pbp2_mrdA
TIGR03423 penicillin-binding protein 2; Members of this protein family are penicillin-binding protein 2 ...
23-554
6.16e-99
penicillin-binding protein 2; Members of this protein family are penicillin-binding protein 2 (PBP-2), a protein whose gene (designated pbpA or mrdA) generally is found next to the gene for RodA, a protein required for rod (bacillus) shape in many bacteria. PBP-2 acts as a transpeptidase for cell elongation (hence, rod-shape). [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]
Pssm-ID: 274573 [Multi-domain]
Cd Length: 592
Bit Score: 312.92
E-value: 6.16e-99
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489953054 23 R FAL L C G CI L LAL G F L LG R VAW LQ I I APDMLVRQGDMRSL R VQEVSTS RG M I T DR S G RP LA VSV P VKAIWAD P KELH D ag 102
Cdd:TIGR03423 2 R ALV L G G LV L ALF G V L AA R LFY LQ V I RGEEYATLSEDNRI R LVPIPPP RG L I L DR N G VL LA DNR P SFSLEIV P EKVD D -- 79
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489953054 103 git LD NRWKA L SDA L KMPLDQL A --- SRVNANPKGRF I Y L ARQVNPDMADYI -- KKLK LPG IHLREESR RYYP S GE VT AH 177
Cdd:TIGR03423 80 --- LD ATLDR L AKL L DLDPEDI A rfl KELKRSRRFEP I P L KSDLTEEEVARF av NQYR LPG VEIEARLK RYYP Y GE LA AH 156
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489953054 178 LI G FTN - VDSQGI E ---------------- G V EK SFDKW L T G Q PG E R I V RKDRY GRVI EDI S STDSQAAHN L A L S ID E RL 240
Cdd:TIGR03423 157 VL G YVG e INEEDL E rlepanyaggdyigks G I EK YYEDE L R G K PG Y R E V EVNAR GRVI RTL S RVPPVPGKD L V L T ID A RL 236
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489953054 241 Q ALVYRE L nnavafn KAES G SA V LV D VA TGE V LAM A S S PS YN PN N F AG -- TA KD A ---------- MR NR S I TD V FE PGST 308
Cdd:TIGR03423 237 Q QAAEKA L ------- GGRR G AV V VM D PR TGE I LAM V S T PS FD PN L F VD gi SS KD Y kallndpdrp LL NR A I QG V YP PGST 309
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489953054 309 V KP M V VMT AL QR G IVNEN T VLNTIP - YRIN G HEIKDVA R -- YSELT L TGVLQK S SN V GVSK LAL AMPSSALVDTYS RFG L 385
Cdd:TIGR03423 310 F KP V V ALA AL EE G VITPE T RIYCPG y FQLG G RRFRCWK R gg HGRVD L RKAIEE S CD V YFYQ LAL RLGIDKIAEYAK RFG F 389
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489953054 386 G KA T NLG L V GE R SGL Y P -------- QK Q R W SDIE ra T FSFGY G --- LM VTPLQLA RVY A TIGSY G - I Y R P ---------- 443
Cdd:TIGR03423 390 G QK T GID L P GE K SGL V P srewkrkr FG Q P W YPGD -- T LNVSI G qgy VL VTPLQLA VAT A ALANG G k L Y K P hlvksiedpd 467
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489953054 444 - LSITKVD P P V PGERVFPESIVRT V VHM M ES V A - L PGG GGVK A AI - KG Y RI A I KTGTA KK V GP -- DGR Y INKY I AYT --- 515
Cdd:TIGR03423 468 g GVVRRTE P E V LRPLPISPENLDV V REG M RD V V n G PGG TARR A RL g LP Y KM A G KTGTA QV V SL kq GEK Y DAEQ I PER lrd 547
570 580 590 600
....*....|....*....|....*....|....*....|...
gi 489953054 516 ---- AGV AP AS NP RF A LV V VIN dp QA G ky Y G GAVS AP VFGA IM 554
Cdd:TIGR03423 548 half VAF AP YD NP KI A VA V IVE -- HG G -- G G SSAA AP IARK IM 586
Transpeptidase
pfam00905 Penicillin binding protein transpeptidase domain; The active site serine (residue 337 in Swiss: ...
260-554
7.42e-96
Penicillin binding protein transpeptidase domain; The active site serine (residue 337 in Swiss:P14677) is conserved in all members of this family.
Pssm-ID: 425939 [Multi-domain]
Cd Length: 296
Bit Score: 294.71
E-value: 7.42e-96
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489953054 260 GSAV LV D VA TGEVLAM ASS PSY N PN N F agta KDAM RNR SI T DVF EPGST V KP MVVMT AL QR G IVNENTVLNTI P YRI - N G 338
Cdd:pfam00905 1 GSAV VL D PK TGEVLAM VGK PSY D PN G F ---- IGPL RNR AV T SRY EPGST F KP FTALA AL DN G VLKPDETIFDW P GKQ q G G 76
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489953054 339 HE I K D -- VARYSEL TL TGV L QK SSN VGVS KLA LAMPSSA L VDTYSR FG L G KA T NL GL V GE RS G L yp QKQR W sd I E R AT F S 416
Cdd:pfam00905 77 KS I G D wn QDQVGIG TL RQA L EY SSN WYMQ KLA QKLGADK L RSYLKK FG Y G NK T GI GL P GE NA G Y -- LTPY W -- L E G AT A S 152
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489953054 417 FG Y GL MV TPLQ L A RV YA T I GSY G IYR P LSIT K ----- VDP P V PGERVFPE S IVRT V VH M MES V ALP G G G GVK AA IK GY RI 491
Cdd:pfam00905 153 FG I GL TI TPLQ Q A QA YA A I ANG G KLV P PHLV K siedk VDP K V LNKLPISK S TAEK V KD M LRL V VND G T G TGT AA VP GY KV 232
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 489953054 492 A I KTGTA KKV GP D G R -- Y INKY I AYTA G V APA S NP RF A LV V V I N DP Q ag K YYGG A V S AP V F GA I M 554
Cdd:pfam00905 233 A G KTGTA QVA GP K G G gy Y DGAQ I GWFV G Y APA D NP KY A FA V L I D DP K -- R YYGG K V A AP I F KD I L 295
PRK10795
PRK10795 penicillin-binding protein 2; Provisional
15-558
4.19e-39
penicillin-binding protein 2; Provisional
Pssm-ID: 236761 [Multi-domain]
Cd Length: 634
Bit Score: 151.84
E-value: 4.19e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489953054 15 E Q A N FV SWRFALLC G c ILL AL G F L LGRVAW LQI IAPDMLVRQGDMRSLRVQEVST SRG M I T DR S G R PLA VSVPVKAIWAD 94
Cdd:PRK10795 14 E S A L FV RRALVAFL G - ILL LT G V L IANLYN LQI VRFTDYQTRSNENRIKLVPIAP SRG I I Y DR N G T PLA LNRTIYQLEMM 92
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489953054 95 P KELHD aggit L DNRWK AL SDALKMPL D QL A S ---- R VNAN pkg RF IYLARQV N PDMAD ---- YIKKLKL PG IHLREES R 166
Cdd:PRK10795 93 P EKVDN ----- L QQTLD AL RSVVDLTD D DI A A frke R ARSR --- RF TSIPVKT N LTEVQ varf AVNQYRF PG VEVKGYQ R 164
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489953054 167 RYYP S G EVTA H L IG FTN --------- V D SQ G IE ------------ G V E KSFDKW L T G QP G ERI V RKDRY GRVI EDISSTD 225
Cdd:PRK10795 165 RYYP Y G SALT H V IG YVS kindkdver L D KE G KL anyaathdigkl G I E RYYEDV L H G KT G YEE V EVNNR GRVI RQLHEQP 244
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489953054 226 S QA A H NLA L SI D ER LQ ALVYRE L NNAV A fnkaesg SA V LV D VA TG EV LA MA S S PSY N PN --------- NFA G TAK D AM R - 295
Cdd:PRK10795 245 P QA G H DIY L TL D LK LQ QYIETL L AGSR A ------- AV V VT D PR TG GI LA LV S T PSY D PN lfvdgissk DYS G LLN D PN R p 317
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489953054 296 -- NR SITD V FE P G STVKP M V VMT AL QR G IVNE NT V L NT i P -- YRIN G H E -- IK D VARY -- SE L TL T GV L QK S SNVGVSKL 367
Cdd:PRK10795 318 li NR ATQG V YP P A STVKP Y V AVS AL SA G VITR NT S L FD - P gw WQLP G S E kr YR D WKKW gh GR L NV T KS L EE S ADTFFYQV 396
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489953054 368 A LA M PSSA L VDTYSR FG L G KA T NLG L VG ERSG LY P Q -------- K QR W SDIERATFSF G Y G L - MV TP L Q LARVYA T IGSY 438
Cdd:PRK10795 397 A YD M GIDR L SEWMGK FG Y G HY T GID L AE ERSG NM P T rewkqkrf K KP W YQGDTIPVGI G Q G Y w TA TP I Q MSKALM T LIND 476
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489953054 439 G - IYR P -- L SI T KV D - PP VP GER vf P ESIVRTVV H M --------- M ES VA - L P G G GGV K A - A IKG Y R IA I K T GTA KKV G - 502
Cdd:PRK10795 477 G i VKV P hl L MS T AE D g KQ VP WVQ -- P HEPPVGDI H S gyweiakdg M YG VA n R P N G TAH K Y f A SAP Y K IA A K S GTA QVF G l 554
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 489953054 503 - PDGR Y INKY IA ------- YTAGV AP AS NP RF A LVVVIND pqagkyy GGA vs A P VF G A IM GGV L 558
Cdd:PRK10795 555 k ANET Y NAHK IA erlrdhk LMTAF AP YN NP QV A VAIILEN ------- GGA -- G P AV G T IM RQI L 609
MrcB
COG0744 Penicillin-binding protein 1B/1F, peptidoglycan transglycosylase/transpeptidase [Cell wall ...
235-565
4.55e-34
Penicillin-binding protein 1B/1F, peptidoglycan transglycosylase/transpeptidase [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 440507 [Multi-domain]
Cd Length: 630
Bit Score: 136.97
E-value: 4.55e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489953054 235 SI D ER LQ ALVYRELN N AVAFN K AES -- GSA V L VD VA TGEVLAM ASSPS Y NPNN F agtakdamr NR SITDVFE PGST V KP M 312
Cdd:COG0744 300 TL D PK LQ KAAEKAVK N VLPEG K PGG lq AAL V V VD PK TGEVLAM VGGRD Y GKSQ F --------- NR ATQAKRQ PGST F KP F 370
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489953054 313 V VMT AL QR G I v NEN T VLNTI P YRIN G -- HEI K DVAR -- YSEL TL TGV L QK S S N VGVSK LA LAMPSSAL VDT YS R F G LGKA 388
Cdd:COG0744 371 V YAA AL EQ G Y - TPA T TVDDE P VTFP G gg WSP K NYDG ry RGPV TL REA L AN S L N TPAVR LA QEVGLDKV VDT AR R L G ITSP 449
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489953054 389 TNLGL vgersglypqkqrwsdieratf S FGY G LM - V T PL QL A RV YAT IGSY G I Y - R P LS ITKV --------- DPPVPG E R 457
Cdd:COG0744 450 LDPNP ---------------------- S LAL G TS e V S PL EM A SA YAT FANG G V Y v E P HA ITKV tdadgkvly EAKPKC E Q 507
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489953054 458 V FPESIVRTVVH M MES V a LPG G G G VK A AIK G YRI A I KTGT A kkvgpdgryi N KYI - A YTA G vapa SN P RFALV V VI --- N 533
Cdd:COG0744 508 V ISPEVAYLMTD M LQD V - VTS G T G RA A RLP G RPV A G KTGT T ---------- N DNR d A WFV G ---- YT P QLVTA V WV gnd D 572
330 340 350
....*....|....*....|....*....|..
gi 489953054 534 DPQA G KYY GG AVS AP VFGAI M GGV L RTMNI E P 565
Cdd:COG0744 573 NSPM G YVT GG SLP AP IWRDF M EAA L EGLPV E D 604
PBP_dimer
pfam03717 Penicillin-binding Protein dimerization domain; This domain is found at the N terminus of ...
70-219
4.00e-26
Penicillin-binding Protein dimerization domain; This domain is found at the N terminus of Class B High Molecular Weight Penicillin-Binding Proteins. Its function has not been precisely defined, but is strongly implicated in PBP polymerization. The domain forms a largely disordered 'sugar tongs' structure.
Pssm-ID: 427460 [Multi-domain]
Cd Length: 178
Bit Score: 105.10
E-value: 4.00e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489953054 70 S RG M I T DR S G RP LA VSV PV KAIWAD P KE L HD A - GGI T LDNRW K A LS DALKMPLDQ L AS R VNANPKGR --- FIYLARQVNP 145
Cdd:pfam03717 5 P RG E I Y DR N G VV LA TNK PV YSLTIT P SK L KK A d ALK T ALKLA K L LS NYEDLDDED L TE R FLKMNSYK syy PVVIKKNLSE 84
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489953054 146 DMADY I KK -- L K LPG IHLREESR RYYP S GE VT AHL I G FTNV ----------------- D SQ G IE G V EK SFDKW L T G QP G E 206
Cdd:pfam03717 85 EEVAR I EE nl L E LPG VSIETDPV RYYP Y GE LA AHL L G YVGE iteeelekyldkgysrg D LV G KS G L EK QYESV L R G KD G V 164
170
....*....|...
gi 489953054 207 R I V RK D RY GRVI E 219
Cdd:pfam03717 165 R Q V EV D AL GRVI R 177
PbpC
COG4953 Membrane carboxypeptidase/penicillin-binding protein PbpC [Cell wall/membrane/envelope ...
228-518
8.16e-20
Membrane carboxypeptidase/penicillin-binding protein PbpC [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 443980 [Multi-domain]
Cd Length: 773
Bit Score: 93.74
E-value: 8.16e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489953054 228 AAHNLALSI D ER LQ ALVY R ELNNA V A --- F N KAESGSAVL VD VA TGEVLA MAS S PSYNPNNFA G ----- T A K damrn RS i 299
Cdd:COG4953 270 GGTRIRTTL D AG LQ RRLE R LVRRY V R rlk Q N GIHNAAVLV VD NR TGEVLA YVG S ADFFDASRQ G qvdmv R A L ----- RS - 343
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489953054 300 tdvfe PGST V KP MVVMT AL QR G IVNEN T V L NTI P YRIN G HEIKD var YSE ----- LTLTGV L QK S S N V gvsklalam P SS 374
Cdd:COG4953 344 ----- PGST L KP FLYGL AL DQ G LIHPE T L L ADV P TSFG G YRPEN --- FDG tfqgp VSAREA L AR S L N I --------- P AV 406
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489953054 375 A L VDTY -- S RF g LGKATNL GL vge R SG L Y P QKQ rwsdieratfsfg YGL M ------- VT PLQ L ARV YA TIGSY G IY RPL S 445
Cdd:COG4953 407 R L LEAL gp A RF - YARLRRA GL --- R LL L P P AEH ------------- YGL S lilggae VT LEE L VGL YA ALARG G EA RPL R 469
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489953054 446 ITKVD P PV PG E R VFPESIVRT V VHMMES V AL P G G - G G VK A AIKGYR IA I KTGT ------ A KK VG PD GR yinkyia YT A GV 518
Cdd:COG4953 470 LLAGE P AS PG R R LLSPGAAWL V RDILSD V PR P D G a F G WR A LDSPPP IA W KTGT sygfrd A WA VG FT GR ------- YT V GV 542
PRK14850
PRK14850 penicillin-binding protein 1b; Provisional
260-508
1.33e-04
penicillin-binding protein 1b; Provisional
Pssm-ID: 237835 [Multi-domain]
Cd Length: 764
Bit Score: 44.84
E-value: 1.33e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489953054 260 GSA V LV D VAT GEV L A M -- A S S P SY N PN N F A GT A K damrn RSI tdvfep GS TV KP MVVM TAL - Q RGIVNE NT VLNTI P YR I 336
Cdd:PRK14850 416 VAM V II D RFS GEV R A L ig S S K P EF N GY N R A LK A R ----- RSI ------ GS LS KP ITYL TAL s Q PEKYHL NT WISDT P IS I 484
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489953054 337 --- NG HEIK ---- DVARYSELT L TGV L QK S S N VGVSK L ALAMPSSA LVD TYSRF G LGK atnlglvg ERSGLY P qkqrwsd 409
Cdd:PRK14850 485 kld NG QYWT pknn NFSFSGKVM L IDA L IH S I N IPTVH L SINLGLKK LVD SWILL G ISS -------- NYITPL P ------- 549
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489953054 410 iera TF S F G y GLMV TP LQL A R V YAT IGS Y G IYR pl S ITKVDPPVPGERV ----- FP E S I ------- VRTVVHM M ES V ALP 477
Cdd:PRK14850 550 ---- SI S L G - AINL TP MEV A Q V FQI IGS G G YKS -- S LSSIRSIISDDNK vlyqn FP Q S K hvessqa SYLTLYA M QQ V VKS 622
250 260 270
....*....|....*....|....*....|....*...
gi 489953054 478 G GG - GVKAAI K GYRI A I KTGT AKK ------ VG P DG RYI 508
Cdd:PRK14850 623 G TA k SLGTIF K EFSL A G KTGT TNN lvdswf VG I DG KQV 660
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.21
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
