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Conserved domains on  [gi|489955169|ref|WP_003858476|]
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MULTISPECIES: fimbrial protein [Enterobacter]

Protein Classification

fimbrial protein( domain architecture ID 10007530)

fimbrial protein similar to Escherichia coli fimbrial adapter PapF, which is required for the correct presentation of the PapG adhesin at the distal end of the tip fibrillum

Gene Ontology:  GO:0009289|GO:0007155
PubMed:  1670938|22411982|2890081

Graphical summary

 Zoom to residue level

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List of domain hits

 Name Accession Description Interval E-value
FimA COG3539
Pilin (type 1 fimbrial protein) [Cell motility];
1-178 8.47e-42

Pilin (type 1 fimbrial protein) [Cell motility];


:

Pssm-ID: 442760 [Multi-domain]  Cd Length: 172  Bit Score: 137.86  E-value: 8.47e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489955169   1 MNKVALGLFIAATVgcsaSAFAATNGEGQINFTGEIIDSACQVVNGlSNPLDVQLGKVSKTVFTGAGSTSTLTKFDIKLT 80
Cdd:COG3539    1 MKKLLLALLLALAL----SAAAAAAADGTVNFTGTVVAPTCTINTG-SKDQTVDLGTVSTSDLNGVGSTSGPKPFSIKLT 75

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489955169  81 NCPETVT-SAAINFGGTPDADNNAALALTpDTDAATGVAIQLVDTSGQPVSLYTPSKQYPLASGTAvNDLEFGARYIQTQ 159
Cdd:COG3539   76 NCDAGTSnSVKVTFTGTADSANPGLLANT-GSGGASGVGIQLLDSDGTPIPLGTPSSAVTLTSNGS-ATLPFYARYVATG 153

                        170
                 ....*....|....*....
gi 489955169 160 AAVTAGPANSVSTFTVIYN 178
Cdd:COG3539  154 ATVTAGSFNATATFTIDYQ 172
 
Name Accession Description Interval E-value
FimA COG3539
Pilin (type 1 fimbrial protein) [Cell motility];
1-178 8.47e-42

Pilin (type 1 fimbrial protein) [Cell motility];


Pssm-ID: 442760 [Multi-domain]  Cd Length: 172  Bit Score: 137.86  E-value: 8.47e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489955169   1 MNKVALGLFIAATVgcsaSAFAATNGEGQINFTGEIIDSACQVVNGlSNPLDVQLGKVSKTVFTGAGSTSTLTKFDIKLT 80
Cdd:COG3539    1 MKKLLLALLLALAL----SAAAAAAADGTVNFTGTVVAPTCTINTG-SKDQTVDLGTVSTSDLNGVGSTSGPKPFSIKLT 75

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489955169  81 NCPETVT-SAAINFGGTPDADNNAALALTpDTDAATGVAIQLVDTSGQPVSLYTPSKQYPLASGTAvNDLEFGARYIQTQ 159
Cdd:COG3539   76 NCDAGTSnSVKVTFTGTADSANPGLLANT-GSGGASGVGIQLLDSDGTPIPLGTPSSAVTLTSNGS-ATLPFYARYVATG 153

                        170
                 ....*....|....*....
gi 489955169 160 AAVTAGPANSVSTFTVIYN 178
Cdd:COG3539  154 ATVTAGSFNATATFTIDYQ 172
lpfA PRK15289
fimbrial protein; Provisional
 7-177 1.38e-28

fimbrial protein; Provisional


Pssm-ID: 185189  Cd Length: 190  Bit Score: 104.66  E-value: 1.38e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489955169   7 GLFIAATVGCSASAFAAtngEGQINFTGEIIDSACQVVNGLSNPlDVQLGKVSKTVFTGAGSTSTLTKFDIKLTNCPETV 86
Cdd:PRK15289   8 GAFTLASLMLAGHALAE---DGVVHFVGEIVDTTCEVTSDTADQ-IVPLGKVSKNAFSGVGSLASPQKFSIKLENCPATY 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489955169  87 TSAAINFGGTPDADNNAALAL-TPDTD-------------AATGVAIQLVDTS-GQPVSLYTPSKQYPL-ASGTAvnDLE 150
Cdd:PRK15289  84 TQAAVRFDGTEAPGGDGDLKVgTPLTAgnpgdftgtgqaiAATGVGIRIFNQSdNSQVKLYNDSAYTAIdAEGKA--EMK 161

                        170       180
                 ....*....|....*....|....*..
gi 489955169 151 FGARYIQTQAAVTAGPANSVSTFTVIY 177
Cdd:PRK15289 162 FIARYVATNATVTAGTANADSQFTVEY 188
Fimbrial pfam00419
Fimbrial protein;
30-178 4.88e-10

Fimbrial protein;


Pssm-ID: 425671  Cd Length: 152  Bit Score: 55.13  E-value: 4.88e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489955169   30 INFTGEI--IDSACQVVNGLsnPLDVQLGKVSKTVFTGAGSTSTLTKFDIKLtNCPETVTSAAIN--FGGTPDADNNAAL 105
Cdd:pfam00419   1 INFTGTVtrVPATCKITAGT--PIEVDFGQIPVNELNAGGEGSRQKPFSITL-ECSSGSSAVKVTvgLFGTADASSPNLL 77

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 489955169  106 ALTPDTDAATGVAIQLVDTSGQPVSLYTP-SKQYPLASGTAVNDLEFGARYIQTQA-AVTAGPANSVSTFTVIYN 178
Cdd:pfam00419  78 LTGNGAGAATGVGIRLYDANGGALPPNNGtSSIPVSATAAVATGITFTASLVATTGgTPTAGDFNATATIVVDYQ 152
 
Name Accession Description Interval E-value
FimA COG3539
Pilin (type 1 fimbrial protein) [Cell motility];
1-178 8.47e-42

Pilin (type 1 fimbrial protein) [Cell motility];


Pssm-ID: 442760 [Multi-domain]  Cd Length: 172  Bit Score: 137.86  E-value: 8.47e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489955169   1 MNKVALGLFIAATVgcsaSAFAATNGEGQINFTGEIIDSACQVVNGlSNPLDVQLGKVSKTVFTGAGSTSTLTKFDIKLT 80
Cdd:COG3539    1 MKKLLLALLLALAL----SAAAAAAADGTVNFTGTVVAPTCTINTG-SKDQTVDLGTVSTSDLNGVGSTSGPKPFSIKLT 75

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489955169  81 NCPETVT-SAAINFGGTPDADNNAALALTpDTDAATGVAIQLVDTSGQPVSLYTPSKQYPLASGTAvNDLEFGARYIQTQ 159
Cdd:COG3539   76 NCDAGTSnSVKVTFTGTADSANPGLLANT-GSGGASGVGIQLLDSDGTPIPLGTPSSAVTLTSNGS-ATLPFYARYVATG 153

                        170
                 ....*....|....*....
gi 489955169 160 AAVTAGPANSVSTFTVIYN 178
Cdd:COG3539  154 ATVTAGSFNATATFTIDYQ 172
lpfA PRK15289
fimbrial protein; Provisional
 7-177 1.38e-28

fimbrial protein; Provisional


Pssm-ID: 185189  Cd Length: 190  Bit Score: 104.66  E-value: 1.38e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489955169   7 GLFIAATVGCSASAFAAtngEGQINFTGEIIDSACQVVNGLSNPlDVQLGKVSKTVFTGAGSTSTLTKFDIKLTNCPETV 86
Cdd:PRK15289   8 GAFTLASLMLAGHALAE---DGVVHFVGEIVDTTCEVTSDTADQ-IVPLGKVSKNAFSGVGSLASPQKFSIKLENCPATY 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489955169  87 TSAAINFGGTPDADNNAALAL-TPDTD-------------AATGVAIQLVDTS-GQPVSLYTPSKQYPL-ASGTAvnDLE 150
Cdd:PRK15289  84 TQAAVRFDGTEAPGGDGDLKVgTPLTAgnpgdftgtgqaiAATGVGIRIFNQSdNSQVKLYNDSAYTAIdAEGKA--EMK 161

                        170       180
                 ....*....|....*....|....*..
gi 489955169 151 FGARYIQTQAAVTAGPANSVSTFTVIY 177
Cdd:PRK15289 162 FIARYVATNATVTAGTANADSQFTVEY 188
PRK15209 PRK15209
long polar fimbrial protein LpfA; Provisional
 1-178 1.04e-27

long polar fimbrial protein LpfA; Provisional


Pssm-ID: 185131 [Multi-domain]  Cd Length: 174  Bit Score: 101.97  E-value: 1.04e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489955169   1 MNKVALGLFIAATVgcSASAFAATNGEGQINFTGEIIDSACqVVNGLSNPLDVQLGKVSKTVFTGAGSTSTLTKFDIKLT 80
Cdd:PRK15209   1 MKKVVFALSALALT--STSVFAAESGDGTVKFTGEIVDAPC-VVSTDSQNQEVVLGQVKKSVFKAIGDKSSAKPFQIKLE 77

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489955169  81 NCP-ETVTSAAINFGGTPDADNNAALALTPDTDAATGVAIQLVDTSGQPVSLYTPSKQYPLASGTAVndLEFGARYIQTQ 159
Cdd:PRK15209  78 DCDiTTNKKVNVSFNGVGDADDSTLVSVSTEAGAATGVGIGIYDNANTLVELNTGKSTTTLAAGQTV--LYFTANYVSTK 155

                        170
                 ....*....|....*....
gi 489955169 160 AAVTAGPANSVSTFTVIYN 178
Cdd:PRK15209 156 DTVTTGYGNAEVDFNLSYE 174
PRK09934 PRK09934
fimbriae assembly protein;
8-178 5.19e-18

fimbriae assembly protein;


Pssm-ID: 182153 [Multi-domain]  Cd Length: 171  Bit Score: 76.85  E-value: 5.19e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489955169   8 LFIAATVGCSASAFAATN-GEGQINFTGEIIDSACQVVNGLSNPlDVQLGKVSKTVFTGAGSTSTLTKFDIKLTNCPEtv 86
Cdd:PRK09934   6 FACFCGLLWSPLSWAADPlGEINIELHGNVVDFTCTVNTADSDK-TVDLGTWPTKQLLNAGDTTQPVPFSLKLEGCPP-- 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489955169  87 TSAAINFGGTPDADNNaALALTpDTDAATGVAIQLVDTSGQPVSLYTPSKQYPL-ASGTAVndLEFGARYIQTQAAVTAG 165
Cdd:PRK09934  83 GSASITFTGTPASDTN-LLALD-DPAMAQTVAIEIRDSDRSRLALGQASPTVEVdANGNAT--LNFYANYIALADGVQPG 158

                        170
                 ....*....|...
gi 489955169 166 PANSVSTFTVIYN 178
Cdd:PRK09934 159 VAKADATFMINYN 171
PRK15194 PRK15194
type 1 fimbrial protein subunit FimA;
7-177 1.74e-17

type 1 fimbrial protein subunit FimA;


Pssm-ID: 237920  Cd Length: 185  Bit Score: 75.76  E-value: 1.74e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489955169   7 GLFIAATVGCSASAFAATNGEGQINFTGEIIDSACqVVNGLSNPLDVQLGKVSKTVFTGAGSTSTLTKFDIKLTNC-PET 85
Cdd:PRK15194  12 SLLFVAGAAYAADPTPVSVDGGTIHFEGELVNAAC-SVNTDSADQTVTLGQYRTAIFTAVGNTTALIPFTIQLNDCdPVV 90

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489955169  86 VTSAAINFGGTPDADNNAALALTP--DTDAATGVAIQLVDTSGQPVSL--YTPSKQYPLASGTavNDLEFGARYIQTQAA 161
Cdd:PRK15194  91 AATAAVAFSGQADATNDNLLAVASstNTTTATGVGIEILDNTSSILKPdgATFSANQNLIEGT--NTLHFSARYKATGTS 168

                        170
                 ....*....|....*.
gi 489955169 162 VTAGPANSVSTFTVIY 177
Cdd:PRK15194 169 ASAGQANADATFIMKY 184
PRK15190 PRK15190
fimbrial protein BcfE; Provisional
 1-177 2.41e-17

fimbrial protein BcfE; Provisional


Pssm-ID: 185112  Cd Length: 181  Bit Score: 75.12  E-value: 2.41e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489955169   1 MNKVALGLFIAATVGCSASAFAATNGEGQINFTGEIIDSACQV-VNGLSNPLDvqLGKVSKTVFTGAGSTSTLTKFDIKL 79
Cdd:PRK15190   1 MNRSHCALFAMGLMLCPQINASADDLAYNLEFTGTIVAQTCDIdISSLSQSID--LGQFAVGDFPSTGTTTKFKPFNINL 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489955169  80 TNCPETVTSAAINFGGTPDADNNAALALTpDTDA------ATGVAIQLVDTSGQPVSL-YTPSKQYPLASGTavNDLEFG 152
Cdd:PRK15190  79 KNCSRGIAGAKIWFTGEPDPDNPALLAIT-DTGMgsgnmlASGVGVEILNDDQDTISInNADSVVYPLKAGR--NTLSFY 155

                        170       180
                 ....*....|....*....|....*
gi 489955169 153 ARYIQTQAAVTAGPANSVSTFTVIY 177
Cdd:PRK15190 156 IRYKSTRPTVTSGNATAVMYFDMQY 180
PRK15191 PRK15191
fimbrial protein BcfF; Provisional
 14-177 1.51e-16

fimbrial protein BcfF; Provisional


Pssm-ID: 185113 [Multi-domain]  Cd Length: 172  Bit Score: 72.83  E-value: 1.51e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489955169  14 VGCSASAFAATNGEGQINFTGEIIDSACQVVNGLSNpLDVQLGKVSKTVFTGAGSTSTLTKFDIKLTNCPETVTSAAINF 93
Cdd:PRK15191   9 IGMLLAASGVQAHDGRVYVSGTITDNTCSLSPGSEN-INVAMGAVSQRQFYRAGDGSAWQPFAIDLQNCGSTASGVTVSF 87

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489955169  94 GGTPDADNNAALALTPDTDAATGVAIQLVDTSGQPVSLYTPSKQYPLASGTAVNDLEFGARYIQTQAAVTAGPANSVSTF 173
Cdd:PRK15191  88 SGAADSRNTDLLALTAGESDASGIGIALYDQNKTLIPLGQESDVVTLSPGQASAHLQFYARYLADGGAVTPGDANASATF 167


                 ....
gi 489955169 174 TVIY 177
Cdd:PRK15191 168 ILAY 171
PRK15205 PRK15205
long polar fimbrial protein LpfE; Provisional
 1-177 1.38e-15

long polar fimbrial protein LpfE; Provisional


Pssm-ID: 237923  Cd Length: 176  Bit Score: 70.65  E-value: 1.38e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489955169   1 MNKVALGLFIAATVGCSASAFAATNGEGQINFTGEIIDSACQVVNglsNPLDVQLGKVSKTVFTGAGSTSTLTKFDIKLT 80
Cdd:PRK15205   3 NKRALLPLALLLLTASGMAAPTDLGPAGDIHFTITIKAKACELEK---DSLEVDMGTMVLQKPVKVGTELNQKNFSIGLK 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489955169  81 NCPEtVTSAAINFGGTPDADNNAALALtpDTDAATGVAIQLVDTSGqpvslytpSKQYP-LASGTAV---------NDLE 150
Cdd:PRK15205  80 DCDG-ISKASVTMDGSPDPDDPSLFAL--DAGGATGVALKIKTSKG--------TQQYPkSTDGTPVewaingdgtTQLN 148

                        170       180
                 ....*....|....*....|....*..
gi 489955169 151 FGARYIQTQAAVTAGPANSVSTFTVIY 177
Cdd:PRK15205 149 YIASYVPVNADATVGTANATVNFSVTY 175
PRK15300 PRK15300
fimbrial protein StiA; Provisional
 12-178 3.94e-13

fimbrial protein StiA; Provisional


Pssm-ID: 185200  Cd Length: 179  Bit Score: 63.96  E-value: 3.94e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489955169  12 ATVGCSASAFAATNGEGQINFTGEIIDSACQVVnglSNPLDVQLGKVSKTVFTGAGSTSTLTKFDIKLTNCPETV-TSAA 90
Cdd:PRK15300  13 AAITLSPAALADTAKDGTVHITGLIKQNACTVK---TDSVEVTLQEEFASLFTAAGQTAGDTDFTIELENCDANVySSVQ 89

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489955169  91 INFGGTPDADNNAALAltpDTDAATGVAIQLVDTSGQPVSL-----YTPSKQYPLASGTAVNDLEFGARYIQTQAAVTAG 165
Cdd:PRK15300  90 ARFEGTLDGTDATILK---NEDDAENIGVQILDKTSTPMTFndlqaWSAAVALPTAEGVTELSMPFTARYIATAVPVKSG 166

                        170
                 ....*....|...
gi 489955169 166 PANSVSTFTVIYN 178
Cdd:PRK15300 167 TVDATATFYLQYN 179
PRK15293 PRK15293
fimbrial protein SthD;
17-177 3.05e-11

fimbrial protein SthD;


Pssm-ID: 185193  Cd Length: 185  Bit Score: 59.30  E-value: 3.05e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489955169  17 SASAFAATNGEGQINF--TGEIIDSACQVvnglSNPLDVQLGKVSKTVFTGAGSTSTLTKFDIKLTNCPETVTSAAINFG 94
Cdd:PRK15293  22 SPSISAAYNTADAVDInvTGLIYADPCTV----TVPDTLSLGQYARADIAVAGGNTATIPFTIKMTNCPATTTKAAISFN 97

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489955169  95 GTPDADNNAALALTPDTDA--ATGVAIQLVDTSGQPVSLYTPSKQY--PLASGTAVNDLEFGARYIQTQAAVTAGPANSV 170
Cdd:PRK15293  98 GVPYPDPNYASAIYANSAAnpAQDLGLQLFNLDGKSLVNLANNVTYtvDINSNTHEANLPVAARMYTPYGKVTAGDFTSV 177


                 ....*..
gi 489955169 171 STFTVIY 177
Cdd:PRK15293 178 VTITIAW 184
PRK15210 PRK15210
fimbrial protein;
2-177 6.99e-11

fimbrial protein;


Pssm-ID: 185132  Cd Length: 194  Bit Score: 58.17  E-value: 6.99e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489955169   2 NKVALGLfIAATVGCSASAFAATN-------GEGQINFTGEIIDSACQVVNGlSNPLDVQLGKVSKTVFTGAGSTSTLTK 74
Cdd:PRK15210   3 NKIILAM-AAAGMMYGASVFAADTtptagpfGSGKILFTGTITNSPCDIAPG-DDAITVPFGQISYRKLNTADATTESKP 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489955169  75 FDIKLTNC------PETVTSAA------INFGGTPDADNNAALAltpdTDAATGVAIQLVdtSGQPVSLYTPSKQYP--- 139
Cdd:PRK15210  81 FTIHLQNCafdpniPDTAGSAGkmskvtVSFSGTANTSKKAYTT----SGSAQHVGVQLL--KSDNTSIIEPNTPMPdgd 154

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|.
gi 489955169 140 ---LASGTavNDLEFGARYIQTQAAVTAGPANSVSTFTVIY 177
Cdd:PRK15210 155 aqqLQAGN--NELNFFARLIALDNGVTPGDFNASVTYTLKY 193
PRK15187 PRK15187
fimbrial protein BcfA; Provisional
 1-178 4.01e-10

fimbrial protein BcfA; Provisional


Pssm-ID: 185109  Cd Length: 180  Bit Score: 55.98  E-value: 4.01e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489955169   1 MNKVALGLFIAATVG----CSASAFAATNGEGQINFTGEIIDSACQVvNGLSNPLDVQLGKVSKTVFTGAGSTSTLTK-F 75
Cdd:PRK15187   1 MKKPVLALMVSAIAFggmlSTAQADTTTVTGGTVNFVGQVVDAACSV-SADSVDQTVTLGQVRASKLTEAGMVANQKEdF 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489955169  76 DIKLTNC-PETVTSAAINFGGTPDADNNAALALTPDTDAATGVAIQLVDTSGQPVSLYTPSKQYPLASGTavNDLEFGAR 154
Cdd:PRK15187  80 TIKLEDCdTQTSQNAAVIFNGQQDANQPGSLANTAGAGSATNVALQLYGPDGQALNIGESSSTVTLNDGE--NVIPLSVD 157

                        170       180
                 ....*....|....*....|....
gi 489955169 155 YIQTQAAvTAGPANSVSTFTVIYN 178
Cdd:PRK15187 158 YIATGTA-TAGNVTATATFSMVYS 180
Fimbrial pfam00419
Fimbrial protein;
30-178 4.88e-10

Fimbrial protein;


Pssm-ID: 425671  Cd Length: 152  Bit Score: 55.13  E-value: 4.88e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489955169   30 INFTGEI--IDSACQVVNGLsnPLDVQLGKVSKTVFTGAGSTSTLTKFDIKLtNCPETVTSAAIN--FGGTPDADNNAAL 105
Cdd:pfam00419   1 INFTGTVtrVPATCKITAGT--PIEVDFGQIPVNELNAGGEGSRQKPFSITL-ECSSGSSAVKVTvgLFGTADASSPNLL 77

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 489955169  106 ALTPDTDAATGVAIQLVDTSGQPVSLYTP-SKQYPLASGTAVNDLEFGARYIQTQA-AVTAGPANSVSTFTVIYN 178
Cdd:pfam00419  78 LTGNGAGAATGVGIRLYDANGGALPPNNGtSSIPVSATAAVATGITFTASLVATTGgTPTAGDFNATATIVVDYQ 152
PRK15296 PRK15296
fimbrial protein SthA;
1-177 1.25e-09

fimbrial protein SthA;


Pssm-ID: 185196  Cd Length: 181  Bit Score: 54.71  E-value: 1.25e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489955169   1 MNKVALGLFIAATVGCSASAFAATNgegqINFTGEIIDSACQVVNGLSNPLDVQLGKVSKTVFTGAGSTSTLTKFDIKLT 80
Cdd:PRK15296   1 MFNKKIIILAMLTAVASTPVFAQNT----ITFNGKIYDQACTVQVNGSTDTTIDLGNYSKERIAEKGATTDYVPFTVSLV 76

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489955169  81 NCPETV----TSAAINFGGTPDADNNAAL--ALTPDTDAATGVAIQLVDTSGQPVSLYTPSKQYPLASGTAVNDLEFGAR 154
Cdd:PRK15296  77 SCPEAGtgvpTQAMFRFHGATDDSNPTYFknADEGSETGAAGVGISIQNASHSDVTDNTDDAAVNLPTDGSTADFTYYAA 156

                        170       180
                 ....*....|....*....|....
gi 489955169 155 YIQT-QAAVTAGPANSVSTFTVIY 177
Cdd:PRK15296 157 MANDgSATVTGGDVSTQVTYTVSY 180
PRK15200 PRK15200
type 1 fimbrial protein subunit FimI;
28-177 4.17e-09

type 1 fimbrial protein subunit FimI;


Pssm-ID: 185122  Cd Length: 177  Bit Score: 53.32  E-value: 4.17e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489955169  28 GQINFTGEIIDSACqVVNGLSNPLDVQLGKVSKTVFTGAGSTSTLT-KFDIKLTNCPETVTS-AAINFGG-TPDADNNAA 104
Cdd:PRK15200  27 GRVHLRGQLVNGGC-AVATESQDLRVLMGQYRTNAFTGPGSFAPVSvPFSLRLISCSAEVWRhVGIAFAGvTPAEDPHVF 105

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 489955169 105 LAlTPDTDAATGVAIQLVDTSG-QPVSLYTPSKQYPLAsgTAVNDLEFGARYIQTQAAVTAGPANSVSTFTVIY 177
Cdd:PRK15200 106 LA-SGEGIGNAGIGLALFDDQQrQIIPNTLPLHYAPIL--TSEMTLHFTARYRAISENMTPGRIHSEVWFTLVY 176
PRK15220 PRK15220
fimbrial protein YehD;
12-176 1.02e-08

fimbrial protein YehD;


Pssm-ID: 237928  Cd Length: 178  Bit Score: 52.12  E-value: 1.02e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489955169  12 ATVGCSASAFAATNGEGQINFTGEIIDSACQVVNGLSNPLDVQLGKVSKTVFTGAG------STSTLTKFDIKLTNCPE- 84
Cdd:PRK15220  12 SAVFMSAGAFAADEDMGELKINGKVVGTTCQFLGTNSATIELNQVGVDRLANLNPGqiytgyTNPTAMPLKVKCTQGAAp 91

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489955169  85 TVTSAAINFGGTPDADNNAAlaltpdTDAATGVAIQLVDTSGQPvslyTPSKQYPLASGTAVN---DLEFGARYIQTQAA 161
Cdd:PRK15220  92 RISFSRSQFVDNMDITKNNG------SANGAGFAVYYDGTDVKP----DPETGVTLNPNKFENgvyTLNFSARYARVDND 161

                        170
                 ....*....|....*
gi 489955169 162 VTAGPANSVSTFTVI 176
Cdd:PRK15220 162 VTSGDVESTLTLTVV 176
PRK09733 PRK09733
fimbrial-like protein;
1-168 1.23e-08

fimbrial-like protein;


Pssm-ID: 182053  Cd Length: 181  Bit Score: 51.87  E-value: 1.23e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489955169   1 MNKVALGLFIAATVgcSASAFAaTNGEGQINFTGEIIDSACQVVNGLSNpLDVQLGKVSKTVFTgAGSTSTLTKFDIKLT 80
Cdd:PRK09733   2 FKKSLLVAGVAMIL--SNNVFA-DEGHGIVKFKGEVISAPCSIKPGDED-LTVNLGEVADTVLK-SDQKSLAEPFTIHLQ 76

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489955169  81 NC-----PETVTSAAINFG-GTPDADNNAALALTPDTD--AATGVAIQLVDTSGQPVSLYTPSkQYPLASGTAVNDLEFG 152
Cdd:PRK09733  77 DCmlsqgGTTYSKAKVTFTtANTMTGQSDLLKNTKETEigGATGVGVRILDSQSGEVTLGTPV-VITFNNTNSYQELNFK 155

                        170
                 ....*....|....*.
gi 489955169 153 ARyiQTQAAVTAGPAN 168
Cdd:PRK09733 156 AR--MESPSKDATPGN 169
PRK15292 PRK15292
type 1 fimbrial protein;
48-178 1.55e-06

type 1 fimbrial protein;


Pssm-ID: 237935 [Multi-domain]  Cd Length: 365  Bit Score: 46.87  E-value: 1.55e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489955169  48 SNPLDVQLGKVSKTVFTGAGSTSTLTKfDIKLTNCPETVTSAAINF----GGTPDaDNNAALALTPDTDAATGVAIQL-- 121
Cdd:PRK15292 203 TPALTFDMGSINAGSFANSQTVGTAEQ-DILLSCEPGTNVSASVSAqpasGDNPD-NTVIALSNASAPTSATGVGVQLni 280

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489955169 122 ------VDTSG----QPVSLYTPSKQYPLASGTAVN------------------DLEFGARYIQTQAAVTAGPANSVSTF 173
Cdd:PRK15292 281 qapdagFFTDSlpinTKIDLFTSTRTTNADGSQTVSysyftnpdspggamnmstTLKISANYYKTGATVTAGQANATGTL 360


                 ....*
gi 489955169 174 TVIYN 178
Cdd:PRK15292 361 TLTYN 365
PRK15307 PRK15307
major fimbrial protein StkA; Provisional
 1-178 2.40e-05

major fimbrial protein StkA; Provisional


Pssm-ID: 185207  Cd Length: 201  Bit Score: 43.11  E-value: 2.40e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489955169   1 MNKVALGLFIAATVGCSaSAFAATNGEGQINFTGEIIDSACQVV--NGLS---NPLDVQLGKVSKTVF-TGAGSTSTL-- 72
Cdd:PRK15307   3 LKKYGLAAAVAMTLSAS-SAMAADPDTGTITFHGLVTNNTCNISldNKIDqdgNDFDITLPTVFVKDFaTALGVNSTLge 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489955169  73 TKFDIKLTNCPE-TVTSAAINFGGTPDADNNAALALTPDTD---AATGVAIQLVDTSGQPVSL----YTPSKQYPLASGT 144
Cdd:PRK15307  82 KQFTLNLSECDNaTLKDASAQFNSWGGSSATSGGLLVPPANlqgSATNVNLVLANNGNTATDLikidQPNNTQKATISTD 161

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|
gi 489955169 145 AVNDLEFGARYIQTQ------AAVTAGPANSVSTFTVIYN 178
Cdd:PRK15307 162 GTGDLFYRVAYTQGQkwnadtSPVTSGTVQAQVAFTMIYN 201
FimA pfam16970
Type-1 fimbrial protein, A; FimA is a family of Gram-negative fimbrial component A proteins ...
 55-177 6.44e-04

Type-1 fimbrial protein, A; FimA is a family of Gram-negative fimbrial component A proteins that form part of the pili. There are usually up to 1000 copies of this subunit in one pilus that form a helically wound rod onto which the tip fibrillum (FimF.FimG, FimH) is attached. Pilus subunits are translocated from the cytoplasm to the periplasm via the general secretory pathway SecYEG.


Pssm-ID: 339870  Cd Length: 145  Bit Score: 38.17  E-value: 6.44e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489955169   55 LGKVSKTVFTGAGSTSTLTKFDIKLTNCPETVTSAA-----INFGGTPDADNNAALALTPDtDAATGVAIQLVDTSGQPV 129
Cdd:pfam16970   1 LPTISNKALADPGETAGGTPFDIKLTECPQALDGAGhvgafFEPGGSTDFTSGNLFAIAAD-NAAGDEQIPLLKADGTQA 79

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 489955169  130 SLYTPS-----------KQYPLASGTAVND-----LEFGARYIQTQAA-VTAGPANSVSTFTVIY 177
Cdd:pfam16970  80 NLDGSAiflgkdfaaqaAHTFLVSETAGGDgygatLRYLACYIASGAGsIVAGNLKSQVGFSIAY 144
PRK15262 PRK15262
putative fimbrial protein StaF; Provisional
 6-169 7.00e-04

putative fimbrial protein StaF; Provisional


Pssm-ID: 237933  Cd Length: 197  Bit Score: 38.51  E-value: 7.00e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489955169   6 LGLFIAAtvgCSASAFAATNgegqINFTGEIIDSACQVvnGLSNPLDVQLGKVSKTVFTGAGSTSTL----TKFDIKLTN 81
Cdd:PRK15262  13 LGLLFAL---TSPPAYAGQD----VDLTANIKNSTCQS--GISNNGNVDLGTVGVGYFADNVTAETYypggKEFTITVVD 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489955169  82 CPETVTSAAIN---FGGTP-----DADNNAALALTPDTDAA--TGVAIQLVDTSGQPVSLYTPSKQ----YPLASGTAVN 147
Cdd:PRK15262  84 CALQGTGSVLNqlhFDFRPqsgvmATGSQQIFANEAVAGGAknVGVVIFSIQDPANTFNVLNSDGSsrsvYPVMTSALNN 163

                        170       180
                 ....*....|....*....|....*
gi 489955169 148 -DLEFGARYIQTQAA--VTAGPANS 169
Cdd:PRK15262 164 sSWKFYARMQKIDPAldVTSGQVTS 188
PRK15216 PRK15216
putative fimbrial biosynthesis regulatory protein; Provisional
 8-178 6.15e-03

putative fimbrial biosynthesis regulatory protein; Provisional


Pssm-ID: 185138  Cd Length: 340  Bit Score: 36.18  E-value: 6.15e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489955169   8 LFIAATVGCS------ASAFAATNGEG------QINFTGEiiDSACQVVNglsnpLDVQLGKVSKTVFTGAGSTSTLTKF 75
Cdd:PRK15216 153 VFILRYIGCWgnrecvANVITDLNGKGvykanlTINYNRK--ETTCAPQN-----LTITLDPVPMTKLRAKGEVSEFSKQ 225

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489955169  76 DIKLTNCPETVTSAA-----INFGGTPDA--DNNAALaLTPDTDAATGVAIQLVDTS----GQPVSLYTPSKQYplASGT 144
Cdd:PRK15216 226 GDIILDCKNQVRNAMltsrqIAVNLRSDLvwDENEAV-LKPDNDNGVGFILRDSNRSllkiNKGVAINSIFKTY--AKGS 302

                        170       180       190
                 ....*....|....*....|....*....|....*...
gi 489955169 145 AVNDLE----FGARYIQTQAAVTAGPANSVSTFTVIYN 178
Cdd:PRK15216 303 AVNSVEaipvFATYYVLDPAKVKAGPLQSKALIVVSYN 340
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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