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Conserved domains on  [gi|489958357|ref|WP_003861664|]
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MULTISPECIES: YheU family protein [Enterobacter]

Protein Classification

YheU family protein( domain architecture ID 10012236)

YheU family protein similar to Escherichia coli UPF0270 protein YheU

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK04966 PRK04966
hypothetical protein; Provisional
 1-72 2.26e-48

hypothetical protein; Provisional


:

Pssm-ID: 179903  Cd Length: 72  Bit Score: 146.64  E-value: 2.26e-48
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 489958357  1 MIIPWQDLSPETLDNLIESFVLREGTDYGEHERSLEQKVNDVKRQLKSGDVVLVWSELHETVNIMPRNAFHG 72
Cdd:PRK04966  1 MIIPWQDLAPETLENLIESFVLREGTDYGEHERSLEQKVADVKRQLQSGEAVLVWSELHETVNIMPKSQFRE 72
 
Name Accession Description Interval E-value
PRK04966 PRK04966
hypothetical protein; Provisional
 1-72 2.26e-48

hypothetical protein; Provisional


Pssm-ID: 179903  Cd Length: 72  Bit Score: 146.64  E-value: 2.26e-48
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 489958357  1 MIIPWQDLSPETLDNLIESFVLREGTDYGEHERSLEQKVNDVKRQLKSGDVVLVWSELHETVNIMPRNAFHG 72
Cdd:PRK04966  1 MIIPWQDLAPETLENLIESFVLREGTDYGEHERSLEQKVADVKRQLQSGEAVLVWSELHETVNIMPKSQFRE 72
YheU COG3089
Uncharacterized conserved protein YheU, UPF0270 family [Function unknown];
1-72 1.04e-44

Uncharacterized conserved protein YheU, UPF0270 family [Function unknown];


Pssm-ID: 442323  Cd Length: 76  Bit Score: 137.64  E-value: 1.04e-44
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 489958357  1 MIIPWQDLSPETLDNLIESFVLREGTDYGEHERSLEQKVNDVKRQLKSGDVVLVWSELHETVNIMPRNAFHG 72
Cdd:COG3089   1 MIIPWQQLSPETLDNLIEEFVLREGTDYGEQEVSLEQKVAQVRRQLKRGEAVIVFDELHESVNIMPKEQFRA 72
UPF0270 pfam06794
Uncharacterized protein family (UPF0270);
3-68 3.96e-40

Uncharacterized protein family (UPF0270);


Pssm-ID: 429123  Cd Length: 67  Bit Score: 125.72  E-value: 3.96e-40
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 489958357   3 IPWQDLSPETLDNLIESFVLREGTDYGEHERSLEQKVNDVKRQLKSGDVVLVWSELHETVNIMPRN 68
Cdd:pfam06794  1 IPYQQLDPETLNNLIEEFVLREGTDYGEQEVSLEQKVEQVLQQLKSGEAVIVFSELHESVNIMPKE 66
 
Name Accession Description Interval E-value
PRK04966 PRK04966
hypothetical protein; Provisional
 1-72 2.26e-48

hypothetical protein; Provisional


Pssm-ID: 179903  Cd Length: 72  Bit Score: 146.64  E-value: 2.26e-48
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 489958357  1 MIIPWQDLSPETLDNLIESFVLREGTDYGEHERSLEQKVNDVKRQLKSGDVVLVWSELHETVNIMPRNAFHG 72
Cdd:PRK04966  1 MIIPWQDLAPETLENLIESFVLREGTDYGEHERSLEQKVADVKRQLQSGEAVLVWSELHETVNIMPKSQFRE 72
YheU COG3089
Uncharacterized conserved protein YheU, UPF0270 family [Function unknown];
1-72 1.04e-44

Uncharacterized conserved protein YheU, UPF0270 family [Function unknown];


Pssm-ID: 442323  Cd Length: 76  Bit Score: 137.64  E-value: 1.04e-44
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 489958357  1 MIIPWQDLSPETLDNLIESFVLREGTDYGEHERSLEQKVNDVKRQLKSGDVVLVWSELHETVNIMPRNAFHG 72
Cdd:COG3089   1 MIIPWQQLSPETLDNLIEEFVLREGTDYGEQEVSLEQKVAQVRRQLKRGEAVIVFDELHESVNIMPKEQFRA 72
UPF0270 pfam06794
Uncharacterized protein family (UPF0270);
3-68 3.96e-40

Uncharacterized protein family (UPF0270);


Pssm-ID: 429123  Cd Length: 67  Bit Score: 125.72  E-value: 3.96e-40
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 489958357   3 IPWQDLSPETLDNLIESFVLREGTDYGEHERSLEQKVNDVKRQLKSGDVVLVWSELHETVNIMPRN 68
Cdd:pfam06794  1 IPYQQLDPETLNNLIEEFVLREGTDYGEQEVSLEQKVEQVLQQLKSGEAVIVFSELHESVNIMPKE 66
PRK00304 PRK00304
hypothetical protein; Provisional
 1-55 4.38e-11

hypothetical protein; Provisional


Pssm-ID: 166901  Cd Length: 75  Bit Score: 52.89  E-value: 4.38e-11
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....*
gi 489958357  1 MIIPWQDLSPETLDNLIESFVLREGTDYGEhERSLEQKVNDVKRQLKSGDVVLVW 55
Cdd:PRK00304  1 MLIPYDQLEADTLTRLIEDFVTRDGTDNGD-ETPLETRVLRVRQALTKGQAVILF 54
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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