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Conserved domains on  [gi|489959282|ref|WP_003862589|]
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MULTISPECIES: polymorphic toxin type 44 domain-containing protein [Enterobacter cloacae complex]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Ntox44 super family cl21408
Bacterial toxin 44; A predicted RNase toxin found in bacterial polymorphic toxin systems. The ...
 39-124 3.08e-18

Bacterial toxin 44; A predicted RNase toxin found in bacterial polymorphic toxin systems. The toxin possesses an all-alpha-helical fold with conserved DxK, GNxxxG, and DxxxD motifs. In bacterial polymorphic toxin systems, the toxin is exported by the type 2, type 6 or type 7 secretion systems.


The actual alignment was detected with superfamily member pfam15607:

Pssm-ID: 464773  Cd Length: 94  Bit Score: 73.54  E-value: 3.08e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489959282   39 WFYERVRNGGPWDYKQQKRA---------------YADFGNFHYGAVGYAACIPAKILLIAAGAAQWKAGTSRpewgnft 103
Cdd:pfam15607   1 WWYEMVKTGGPWDHKPKIEDwlntighkynghdyfYDDWGNIHYGYVGRAAGFSESTLLRGSGLEQAITNISN------- 73

                          90       100
                  ....*....|....*....|.
gi 489959282  104 gapPFGDDPIDQFWIKQGIDY 124
Cdd:pfam15607  74 ---SFGDDPDDKITIKIGIDL 91
 
Name Accession Description Interval E-value
Ntox44 pfam15607
Bacterial toxin 44; A predicted RNase toxin found in bacterial polymorphic toxin systems. The ...
 39-124 3.08e-18

Bacterial toxin 44; A predicted RNase toxin found in bacterial polymorphic toxin systems. The toxin possesses an all-alpha-helical fold with conserved DxK, GNxxxG, and DxxxD motifs. In bacterial polymorphic toxin systems, the toxin is exported by the type 2, type 6 or type 7 secretion systems.


Pssm-ID: 464773  Cd Length: 94  Bit Score: 73.54  E-value: 3.08e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489959282   39 WFYERVRNGGPWDYKQQKRA---------------YADFGNFHYGAVGYAACIPAKILLIAAGAAQWKAGTSRpewgnft 103
Cdd:pfam15607   1 WWYEMVKTGGPWDHKPKIEDwlntighkynghdyfYDDWGNIHYGYVGRAAGFSESTLLRGSGLEQAITNISN------- 73

                          90       100
                  ....*....|....*....|.
gi 489959282  104 gapPFGDDPIDQFWIKQGIDY 124
Cdd:pfam15607  74 ---SFGDDPDDKITIKIGIDL 91
 
Name Accession Description Interval E-value
Ntox44 pfam15607
Bacterial toxin 44; A predicted RNase toxin found in bacterial polymorphic toxin systems. The ...
 39-124 3.08e-18

Bacterial toxin 44; A predicted RNase toxin found in bacterial polymorphic toxin systems. The toxin possesses an all-alpha-helical fold with conserved DxK, GNxxxG, and DxxxD motifs. In bacterial polymorphic toxin systems, the toxin is exported by the type 2, type 6 or type 7 secretion systems.


Pssm-ID: 464773  Cd Length: 94  Bit Score: 73.54  E-value: 3.08e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489959282   39 WFYERVRNGGPWDYKQQKRA---------------YADFGNFHYGAVGYAACIPAKILLIAAGAAQWKAGTSRpewgnft 103
Cdd:pfam15607   1 WWYEMVKTGGPWDHKPKIEDwlntighkynghdyfYDDWGNIHYGYVGRAAGFSESTLLRGSGLEQAITNISN------- 73

                          90       100
                  ....*....|....*....|.
gi 489959282  104 gapPFGDDPIDQFWIKQGIDY 124
Cdd:pfam15607  74 ---SFGDDPDDKITIKIGIDL 91
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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