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Conserved domains on  [gi|490249933|ref|WP_004148000|]
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MULTISPECIES: YnfU family zinc-binding protein [Klebsiella]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
zinc_YnfU_fam NF038384
YnfU family zinc-binding protein; The founding member of this family of putative zinc-binding ...
 1-52 1.15e-18

YnfU family zinc-binding protein; The founding member of this family of putative zinc-binding proteins is YnfU, from the Qin prophage region of E. coli K-12.


:

Pssm-ID: 439677  Cd Length: 52  Bit Score: 70.35  E-value: 1.15e-18
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|..
gi 490249933  1 MQQRKNSKNNRNYLIKCTCPSCTNQSEHSYTRVQKGSALMCPHCSKIFTQDK 52
Cdd:NF038384  1 MSFFDALKRFRNRLVKVTCPKCAKVSEQSASKVQKNATLICPKCGALFLPKE 52
 
Name Accession Description Interval E-value
zinc_YnfU_fam NF038384
YnfU family zinc-binding protein; The founding member of this family of putative zinc-binding ...
 1-52 1.15e-18

YnfU family zinc-binding protein; The founding member of this family of putative zinc-binding proteins is YnfU, from the Qin prophage region of E. coli K-12.


Pssm-ID: 439677  Cd Length: 52  Bit Score: 70.35  E-value: 1.15e-18
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|..
gi 490249933  1 MQQRKNSKNNRNYLIKCTCPSCTNQSEHSYTRVQKGSALMCPHCSKIFTQDK 52
Cdd:NF038384  1 MSFFDALKRFRNRLVKVTCPKCAKVSEQSASKVQKNATLICPKCGALFLPKE 52
 
Name Accession Description Interval E-value
zinc_YnfU_fam NF038384
YnfU family zinc-binding protein; The founding member of this family of putative zinc-binding ...
 1-52 1.15e-18

YnfU family zinc-binding protein; The founding member of this family of putative zinc-binding proteins is YnfU, from the Qin prophage region of E. coli K-12.


Pssm-ID: 439677  Cd Length: 52  Bit Score: 70.35  E-value: 1.15e-18
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|..
gi 490249933  1 MQQRKNSKNNRNYLIKCTCPSCTNQSEHSYTRVQKGSALMCPHCSKIFTQDK 52
Cdd:NF038384  1 MSFFDALKRFRNRLVKVTCPKCAKVSEQSASKVQKNATLICPKCGALFLPKE 52
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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