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Conserved domains on  [gi|490278562|ref|WP_004174507|]
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MULTISPECIES: fimbrial protein [Klebsiella]

Protein Classification

fimbrial protein( domain architecture ID 10007530)

fimbrial protein similar to Escherichia coli fimbrial adapter PapF, which is required for the correct presentation of the PapG adhesin at the distal end of the tip fibrillum

Gene Ontology:  GO:0009289|GO:0007155
PubMed:  1670938|22411982|2890081

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
FimA COG3539
Pilin (type 1 fimbrial protein) [Cell motility];
22-178 6.70e-48

Pilin (type 1 fimbrial protein) [Cell motility];


:

Pssm-ID: 442760 [Multi-domain]  Cd Length: 172  Bit Score: 153.66  E-value: 6.70e-48
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490278562  22 WNVTLPGGSMRFQGLIMASSCRVEAGDRQMTVNLGQISSNRFHAVGEDSNPIPFAIHLQDCSTAVSQHVGVTFHGVADGK 101
Cdd:COG3539   17 AAAAAADGTVNFTGTVVAPTCTINTGSKDQTVDLGTVSTSDLNGVGSTSGPKPFSIKLTNCDAGTSNSVKVTFTGTADSA 96

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 490278562 102 NPDVLSVgEGPGIASGIGIALFDSQGQQLPLNRPADRWISLYRGPTTLNFVAKYRATGRQVTGGAANAQAWFSLTYQ 178
Cdd:COG3539   97 NPGLLAN-TGSGGASGVGIQLLDSDGTPIPLGTPSSAVTLTSNGSATLPFYARYVATGATVTAGSFNATATFTIDYQ 172
 
Name Accession Description Interval E-value
FimA COG3539
Pilin (type 1 fimbrial protein) [Cell motility];
22-178 6.70e-48

Pilin (type 1 fimbrial protein) [Cell motility];


Pssm-ID: 442760 [Multi-domain]  Cd Length: 172  Bit Score: 153.66  E-value: 6.70e-48
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490278562  22 WNVTLPGGSMRFQGLIMASSCRVEAGDRQMTVNLGQISSNRFHAVGEDSNPIPFAIHLQDCSTAVSQHVGVTFHGVADGK 101
Cdd:COG3539   17 AAAAAADGTVNFTGTVVAPTCTINTGSKDQTVDLGTVSTSDLNGVGSTSGPKPFSIKLTNCDAGTSNSVKVTFTGTADSA 96

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 490278562 102 NPDVLSVgEGPGIASGIGIALFDSQGQQLPLNRPADRWISLYRGPTTLNFVAKYRATGRQVTGGAANAQAWFSLTYQ 178
Cdd:COG3539   97 NPGLLAN-TGSGGASGVGIQLLDSDGTPIPLGTPSSAVTLTSNGSATLPFYARYVATGATVTAGSFNATATFTIDYQ 172
PRK15209 PRK15209
long polar fimbrial protein LpfA; Provisional
 29-178 5.47e-31

long polar fimbrial protein LpfA; Provisional


Pssm-ID: 185131 [Multi-domain]  Cd Length: 174  Bit Score: 110.45  E-value: 5.47e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490278562  29 GSMRFQGLIMASSCRVEAGDRQMTVNLGQISSNRFHAVGEDSNPIPFAIHLQDCSTAVSQHVGVTFHGVADGKNPDVLSV 108
Cdd:PRK15209  26 GTVKFTGEIVDAPCVVSTDSQNQEVVLGQVKKSVFKAIGDKSSAKPFQIKLEDCDITTNKKVNVSFNGVGDADDSTLVSV 105

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490278562 109 GEGPGIASGIGIALFDSQGQQLPLNrPADRWISLYRGPTTLNFVAKYRATGRQVTGGAANAQAWFSLTYQ 178
Cdd:PRK15209 106 STEAGAATGVGIGIYDNANTLVELN-TGKSTTTLAAGQTVLYFTANYVSTKDTVTTGYGNAEVDFNLSYE 174
Fimbrial pfam00419
Fimbrial protein;
39-178 5.00e-28

Fimbrial protein;


Pssm-ID: 425671  Cd Length: 152  Bit Score: 102.13  E-value: 5.00e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490278562   39 ASSCRVEAGDRQmTVNLGQISSNRFHAVGEDSNPIPFAIHLQDCSTAVSQHVGVTFHGVADGKNPDVLSVGEGPGIASGI 118
Cdd:pfam00419  11 PATCKITAGTPI-EVDFGQIPVNELNAGGEGSRQKPFSITLECSSGSSAVKVTVGLFGTADASSPNLLLTGNGAGAATGV 89

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 490278562  119 GIALFDSQGQQLPLNR--PADRWISLYRGPTTLNFVAKYRATGRQ-VTGGAANAQAWFSLTYQ 178
Cdd:pfam00419  90 GIRLYDANGGALPPNNgtSSIPVSATAAVATGITFTASLVATTGGtPTAGDFNATATIVVDYQ 152
 
Name Accession Description Interval E-value
FimA COG3539
Pilin (type 1 fimbrial protein) [Cell motility];
22-178 6.70e-48

Pilin (type 1 fimbrial protein) [Cell motility];


Pssm-ID: 442760 [Multi-domain]  Cd Length: 172  Bit Score: 153.66  E-value: 6.70e-48
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490278562  22 WNVTLPGGSMRFQGLIMASSCRVEAGDRQMTVNLGQISSNRFHAVGEDSNPIPFAIHLQDCSTAVSQHVGVTFHGVADGK 101
Cdd:COG3539   17 AAAAAADGTVNFTGTVVAPTCTINTGSKDQTVDLGTVSTSDLNGVGSTSGPKPFSIKLTNCDAGTSNSVKVTFTGTADSA 96

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 490278562 102 NPDVLSVgEGPGIASGIGIALFDSQGQQLPLNRPADRWISLYRGPTTLNFVAKYRATGRQVTGGAANAQAWFSLTYQ 178
Cdd:COG3539   97 NPGLLAN-TGSGGASGVGIQLLDSDGTPIPLGTPSSAVTLTSNGSATLPFYARYVATGATVTAGSFNATATFTIDYQ 172
PRK15209 PRK15209
long polar fimbrial protein LpfA; Provisional
 29-178 5.47e-31

long polar fimbrial protein LpfA; Provisional


Pssm-ID: 185131 [Multi-domain]  Cd Length: 174  Bit Score: 110.45  E-value: 5.47e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490278562  29 GSMRFQGLIMASSCRVEAGDRQMTVNLGQISSNRFHAVGEDSNPIPFAIHLQDCSTAVSQHVGVTFHGVADGKNPDVLSV 108
Cdd:PRK15209  26 GTVKFTGEIVDAPCVVSTDSQNQEVVLGQVKKSVFKAIGDKSSAKPFQIKLEDCDITTNKKVNVSFNGVGDADDSTLVSV 105

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490278562 109 GEGPGIASGIGIALFDSQGQQLPLNrPADRWISLYRGPTTLNFVAKYRATGRQVTGGAANAQAWFSLTYQ 178
Cdd:PRK15209 106 STEAGAATGVGIGIYDNANTLVELN-TGKSTTTLAAGQTVLYFTANYVSTKDTVTTGYGNAEVDFNLSYE 174
PRK15194 PRK15194
type 1 fimbrial protein subunit FimA;
24-178 9.43e-30

type 1 fimbrial protein subunit FimA;


Pssm-ID: 237920  Cd Length: 185  Bit Score: 107.73  E-value: 9.43e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490278562  24 VTLPGGSMRFQGLIMASSCRVEAGDRQMTVNLGQISSNRFHAVGEDSNPIPFAIHLQDCSTAVSQHVGVTFHGVADGKNP 103
Cdd:PRK15194  28 VSVDGGTIHFEGELVNAACSVNTDSADQTVTLGQYRTAIFTAVGNTTALIPFTIQLNDCDPVVAATAAVAFSGQADATND 107

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490278562 104 DVLSV--GEGPGIASGIGIALFDSQGQQLplnRPADRWIS----LYRGPTTLNFVAKYRATGRQVTGGAANAQAWFSLTY 177
Cdd:PRK15194 108 NLLAVasSTNTTTATGVGIEILDNTSSIL---KPDGATFSanqnLIEGTNTLHFSARYKATGTSASAGQANADATFIMKY 184


                 .
gi 490278562 178 Q 178
Cdd:PRK15194 185 E 185
PRK15200 PRK15200
type 1 fimbrial protein subunit FimI;
24-177 1.28e-28

type 1 fimbrial protein subunit FimI;


Pssm-ID: 185122  Cd Length: 177  Bit Score: 104.55  E-value: 1.28e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490278562  24 VTLPGGSMRFQGLIMASSCRVEAGDRQMTVNLGQISSNRFHAVGEDSN-PIPFAIHLQDCSTAVSQHVGVTFHGVADGKN 102
Cdd:PRK15200  22 VMVESGRVHLRGQLVNGGCAVATESQDLRVLMGQYRTNAFTGPGSFAPvSVPFSLRLISCSAEVWRHVGIAFAGVTPAED 101

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 490278562 103 PDV-LSVGEGPGiASGIGIALFDSQGQQLPLNRPADRWISLYRGPTTLNFVAKYRATGRQVTGGAANAQAWFSLTY 177
Cdd:PRK15200 102 PHVfLASGEGIG-NAGIGLALFDDQQRQIIPNTLPLHYAPILTSEMTLHFTARYRAISENMTPGRIHSEVWFTLVY 176
Fimbrial pfam00419
Fimbrial protein;
39-178 5.00e-28

Fimbrial protein;


Pssm-ID: 425671  Cd Length: 152  Bit Score: 102.13  E-value: 5.00e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490278562   39 ASSCRVEAGDRQmTVNLGQISSNRFHAVGEDSNPIPFAIHLQDCSTAVSQHVGVTFHGVADGKNPDVLSVGEGPGIASGI 118
Cdd:pfam00419  11 PATCKITAGTPI-EVDFGQIPVNELNAGGEGSRQKPFSITLECSSGSSAVKVTVGLFGTADASSPNLLLTGNGAGAATGV 89

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 490278562  119 GIALFDSQGQQLPLNR--PADRWISLYRGPTTLNFVAKYRATGRQ-VTGGAANAQAWFSLTYQ 178
Cdd:pfam00419  90 GIRLYDANGGALPPNNgtSSIPVSATAAVATGITFTASLVATTGGtPTAGDFNATATIVVDYQ 152
PRK15191 PRK15191
fimbrial protein BcfF; Provisional
 29-178 6.74e-22

fimbrial protein BcfF; Provisional


Pssm-ID: 185113 [Multi-domain]  Cd Length: 172  Bit Score: 87.08  E-value: 6.74e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490278562  29 GSMRFQGLIMASSCRVEAGDRQMTVNLGQISSNRFHAVGEDSNPIPFAIHLQDCSTAVSQhVGVTFHGVADGKNPDVLSV 108
Cdd:PRK15191  23 GRVYVSGTITDNTCSLSPGSENINVAMGAVSQRQFYRAGDGSAWQPFAIDLQNCGSTASG-VTVSFSGAADSRNTDLLAL 101

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 490278562 109 GEGPGIASGIGIALFDSQGQQLPLNRPAD-RWISLYRGPTTLNFVAKYRATGRQVTGGAANAQAWFSLTYQ 178
Cdd:PRK15191 102 TAGESDASGIGIALYDQNKTLIPLGQESDvVTLSPGQASAHLQFYARYLADGGAVTPGDANASATFILAYE 172
PRK09733 PRK09733
fimbrial-like protein;
29-178 2.07e-19

fimbrial-like protein;


Pssm-ID: 182053  Cd Length: 181  Bit Score: 80.76  E-value: 2.07e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490278562  29 GSMRFQGLIMASSCRVEAGDRQMTVNLGQISSNRFHAvGEDSNPIPFAIHLQDC----STAVSQHVGVTFHGVA-DGKNP 103
Cdd:PRK09733  26 GIVKFKGEVISAPCSIKPGDEDLTVNLGEVADTVLKS-DQKSLAEPFTIHLQDCmlsqGGTTYSKAKVTFTTANtMTGQS 104

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490278562 104 DVL-SVGEGP-GIASGIGIALFDSQGQQLPLNRPADrwISLyrgPTT-----LNFVAKYRATGRQVTGGAANAQAWFSLT 176
Cdd:PRK09733 105 DLLkNTKETEiGGATGVGVRILDSQSGEVTLGTPVV--ITF---NNTnsyqeLNFKARMESPSKDATPGNVYAQADYKIA 179


                 ..
gi 490278562 177 YQ 178
Cdd:PRK09733 180 YE 181
PRK15260 PRK15260
fimbrial protein SteF; Provisional
 22-178 2.54e-19

fimbrial protein SteF; Provisional


Pssm-ID: 185168  Cd Length: 178  Bit Score: 80.51  E-value: 2.54e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490278562  22 WNV--TLPGGS--MRFQGLIMASSCR-VEAGDRQMTVNLGQISSNRFHAVGEdSNPIPFAIHLQDCSTAVSQHVGVTFHG 96
Cdd:PRK15260  18 WAVcnTLPAATpnVHYSGKLVAGACNlVVDNDTMATVDFHTIGSDNFDASGQ-TTPVPFTLSLQDCKTALANGVLVTFQG 96

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490278562  97 VADGKNPDVLSVgEGPGIASGIGIALFDSQGQQLPLNRPADRWISLYRGPTTLNFVAKYRAT-GRQVTGGAANAQAWFSL 175
Cdd:PRK15260  97 VEDSTLPGLLAL-EPSSEASGFAIGVETAAQQPVSINATVGTAFVLKEGITTINLQARLQKYaGEEVMPGEFSGSATVSF 175


                 ...
gi 490278562 176 TYQ 178
Cdd:PRK15260 176 EYQ 178
PRK15205 PRK15205
long polar fimbrial protein LpfE; Provisional
 27-178 3.50e-17

long polar fimbrial protein LpfE; Provisional


Pssm-ID: 237923  Cd Length: 176  Bit Score: 74.89  E-value: 3.50e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490278562  27 PGGSMRFQGLIMASSCRVEAGDrqMTVNLGQISSNRFHAVGEDSNPIPFAIHLQDCSTAVSQHVgvTFHGVADGKNPDVL 106
Cdd:PRK15205  28 PAGDIHFTITIKAKACELEKDS--LEVDMGTMVLQKPVKVGTELNQKNFSIGLKDCDGISKASV--TMDGSPDPDDPSLF 103

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 490278562 107 SVGEGPgiASGIGIALFDSQG-QQLPLNR--PADRWISLYRGPTTLNFVAKYRATGRQVTGGAANAQAWFSLTYQ 178
Cdd:PRK15205 104 ALDAGG--ATGVALKIKTSKGtQQYPKSTdgTPVEWAINGDGTTQLNYIASYVPVNADATVGTANATVNFSVTYE 176
PRK09934 PRK09934
fimbriae assembly protein;
35-177 5.14e-17

fimbriae assembly protein;


Pssm-ID: 182153 [Multi-domain]  Cd Length: 171  Bit Score: 74.16  E-value: 5.14e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490278562  35 GLIMASSCRVEAGDRQMTVNLGQISSNRFHAVGEDSNPIPFAIHLQDCSTAVsqhVGVTFHGVaDGKNPDVLSVGEgPGI 114
Cdd:PRK09934  33 GNVVDFTCTVNTADSDKTVDLGTWPTKQLLNAGDTTQPVPFSLKLEGCPPGS---ASITFTGT-PASDTNLLALDD-PAM 107

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 490278562 115 ASGIGIALFDSQGQQLPLNRPADRWISLYRGPTTLNFVAKYRATGRQVTGGAANAQAWFSLTY 177
Cdd:PRK09934 108 AQTVAIEIRDSDRSRLALGQASPTVEVDANGNATLNFYANYIALADGVQPGVAKADATFMINY 170
PRK15190 PRK15190
fimbrial protein BcfE; Provisional
 30-178 5.31e-17

fimbrial protein BcfE; Provisional


Pssm-ID: 185112  Cd Length: 181  Bit Score: 74.35  E-value: 5.31e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490278562  30 SMRFQGLIMASSCRVEAGDRQMTVNLGQISSNRFHAVGEDSNPIPFAIHLQDCSTAVSQhVGVTFHGVADGKNPDVLSV- 108
Cdd:PRK15190  29 NLEFTGTIVAQTCDIDISSLSQSIDLGQFAVGDFPSTGTTTKFKPFNINLKNCSRGIAG-AKIWFTGEPDPDNPALLAIt 107

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 490278562 109 ----GEGPGIASGIGIALFDSQGQQLPLNRPADRWISLYRGPTTLNFVAKYRATGRQVTGGAANAQAWFSLTYQ 178
Cdd:PRK15190 108 dtgmGSGNMLASGVGVEILNDDQDTISINNADSVVYPLKAGRNTLSFYIRYKSTRPTVTSGNATAVMYFDMQYE 181
PRK15187 PRK15187
fimbrial protein BcfA; Provisional
 25-177 4.58e-16

fimbrial protein BcfA; Provisional


Pssm-ID: 185109  Cd Length: 180  Bit Score: 71.77  E-value: 4.58e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490278562  25 TLPGGSMRFQGLIMASSCRVEAGDRQMTVNLGQISSNRFHAVGEDSNPIP-FAIHLQDCSTAVSQHVGVTFHGVADGKNP 103
Cdd:PRK15187  28 TVTGGTVNFVGQVVDAACSVSADSVDQTVTLGQVRASKLTEAGMVANQKEdFTIKLEDCDTQTSQNAAVIFNGQQDANQP 107

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 490278562 104 DVLSVGEGPGIASGIGIALFDSQGQQLPLNRPADRwISLYRGPTTLNFVAKYRATGrQVTGGAANAQAWFSLTY 177
Cdd:PRK15187 108 GSLANTAGAGSATNVALQLYGPDGQALNIGESSST-VTLNDGENVIPLSVDYIATG-TATAGNVTATATFSMVY 179
lpfA PRK15289
fimbrial protein; Provisional
 29-178 1.58e-15

fimbrial protein; Provisional


Pssm-ID: 185189  Cd Length: 190  Bit Score: 70.76  E-value: 1.58e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490278562  29 GSMRFQGLIMASSCRVEAGDRQMTVNLGQISSNRFHAVGEDSNPIPFAIHLQDCSTAVSQhVGVTFHGVADGKNPDVLSV 108
Cdd:PRK15289  26 GVVHFVGEIVDTTCEVTSDTADQIVPLGKVSKNAFSGVGSLASPQKFSIKLENCPATYTQ-AAVRFDGTEAPGGDGDLKV 104

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490278562 109 G-----EGPG---------IASGIGIALFdsqgqqlplNRPADRWISLYR----------GPTTLNFVAKYRATGRQVTG 164
Cdd:PRK15289 105 GtpltaGNPGdftgtgqaiAATGVGIRIF---------NQSDNSQVKLYNdsaytaidaeGKAEMKFIARYVATNATVTA 175

                        170
                 ....*....|....
gi 490278562 165 GAANAQAWFSLTYQ 178
Cdd:PRK15289 176 GTANADSQFTVEYK 189
PRK15210 PRK15210
fimbrial protein;
29-177 6.86e-15

fimbrial protein;


Pssm-ID: 185132  Cd Length: 194  Bit Score: 68.96  E-value: 6.86e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490278562  29 GSMRFQGLIMASSCRVEAGDRQMTVNLGQISSNRFHAVGEDSNPIPFAIHLQDC-----------STAVSQHVGVTFHGV 97
Cdd:PRK15210  35 GKILFTGTITNSPCDIAPGDDAITVPFGQISYRKLNTADATTESKPFTIHLQNCafdpnipdtagSAGKMSKVTVSFSGT 114

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490278562  98 ADGKNPDVLSVgegpGIASGIGIALFDSQGQQL-----PLnrPADRWISLYRGPTTLNFVAKYRATGRQVTGGAANAQAW 172
Cdd:PRK15210 115 ANTSKKAYTTS----GSAQHVGVQLLKSDNTSIiepntPM--PDGDAQQLQAGNNELNFFARLIALDNGVTPGDFNASVT 188


                 ....*
gi 490278562 173 FSLTY 177
Cdd:PRK15210 189 YTLKY 193
PRK15296 PRK15296
fimbrial protein SthA;
30-178 7.00e-11

fimbrial protein SthA;


Pssm-ID: 185196  Cd Length: 181  Bit Score: 58.18  E-value: 7.00e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490278562  30 SMRFQGLIMASSCRVEA-GDRQMTVNLGQISSNRFHAVGEDSNPIPFAIHLQDC---STAVSQHVGVTFHGVADGKNPDV 105
Cdd:PRK15296  25 TITFNGKIYDQACTVQVnGSTDTTIDLGNYSKERIAEKGATTDYVPFTVSLVSCpeaGTGVPTQAMFRFHGATDDSNPTY 104

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 490278562 106 L-SVGEGPGI-ASGIGIALFDSQGQQLPLNrPADRWISLYR--GPTTLNFVAKYRATGR-QVTGGAANAQAWFSLTYQ 178
Cdd:PRK15296 105 FkNADEGSETgAAGVGISIQNASHSDVTDN-TDDAAVNLPTdgSTADFTYYAAMANDGSaTVTGGDVSTQVTYTVSYQ 181
PRK15300 PRK15300
fimbrial protein StiA; Provisional
 25-177 7.35e-11

fimbrial protein StiA; Provisional


Pssm-ID: 185200  Cd Length: 179  Bit Score: 58.18  E-value: 7.35e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490278562  25 TLPGGSMRFQGLIMASSCRVEAGDRQMTvnLGQISSNRFHAVGEDSNPIPFAIHLQDCSTAVSQHVGVTFHGVADGKNPD 104
Cdd:PRK15300  25 TAKDGTVHITGLIKQNACTVKTDSVEVT--LQEEFASLFTAAGQTAGDTDFTIELENCDANVYSSVQARFEGTLDGTDAT 102

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490278562 105 VLsvgEGPGIASGIGIALFDS----------QGQQLPLNRPADrwislyRGPTTLN--FVAKYRATGRQVTGGAANAQAW 172
Cdd:PRK15300 103 IL---KNEDDAENIGVQILDKtstpmtfndlQAWSAAVALPTA------EGVTELSmpFTARYIATAVPVKSGTVDATAT 173


                 ....*
gi 490278562 173 FSLTY 177
Cdd:PRK15300 174 FYLQY 178
PRK15283 PRK15283
fimbrial major subunit StfA;
29-177 2.35e-06

fimbrial major subunit StfA;


Pssm-ID: 185183  Cd Length: 186  Bit Score: 45.53  E-value: 2.35e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490278562  29 GSMRFQGLIMASSCRVEAGDRQMTVNLGQISSNRFHAvGEDSNPIPFAIHLQDCSTAVSQHVGVTFHGVAD--GKNPDVL 106
Cdd:PRK15283  29 GTVTFTGTIEDSPCSIVVGDEHQTVNLGHIGTGSLMG-GKESSKVDFHIGLENCAFTTEKEASTVFSAIGNesSANPGSV 107

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490278562 107 SV-----GEGPGIASGIG------IALFDSQGQQLPLNRpadrwiSLYRGPTTLNFVA--KYRATGRQVTGGAANAQAWF 173
Cdd:PRK15283 108 ALmriggGEMAGSSIVIGnhlgsaIKLGDAYSENLTMNG------SVAAAKQTLNFKAwvKGDSAASTIDTGEFSSTVNF 181


                 ....
gi 490278562 174 SLTY 177
Cdd:PRK15283 182 TISY 185
PRK15292 PRK15292
type 1 fimbrial protein;
37-177 5.70e-06

type 1 fimbrial protein;


Pssm-ID: 237935 [Multi-domain]  Cd Length: 365  Bit Score: 45.33  E-value: 5.70e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490278562  37 IMASSCRVEAGDrqMTVNLGQISSNRFH---AVGEDSNPIPFAIhlqDCSTAVSQHVGVTfhgVADGKNPD----VLSVG 109
Cdd:PRK15292 194 MKAMGCRVETPA--LTFDMGSINAGSFAnsqTVGTAEQDILLSC---EPGTNVSASVSAQ---PASGDNPDntviALSNA 265

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490278562 110 EGPGIASGIGIAL--------FDSQGqqLPLNRP---------------ADRWISLYRGP----------TTLNFVAKYR 156
Cdd:PRK15292 266 SAPTSATGVGVQLniqapdagFFTDS--LPINTKidlftstrttnadgsQTVSYSYFTNPdspggamnmsTTLKISANYY 343

                        170       180
                 ....*....|....*....|.
gi 490278562 157 ATGRQVTGGAANAQAWFSLTY 177
Cdd:PRK15292 344 KTGATVTAGQANATGTLTLTY 364
PRK15293 PRK15293
fimbrial protein SthD;
35-130 3.10e-05

fimbrial protein SthD;


Pssm-ID: 185193  Cd Length: 185  Bit Score: 42.36  E-value: 3.10e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490278562  35 GLIMASSCRVEAGDrqmTVNLGQISSNRFHAVGEDSNPIPFAIHLQDCsTAVSQHVGVTFHGVA--DGKNPDVLSVGEGP 112
Cdd:PRK15293  41 GLIYADPCTVTVPD---TLSLGQYARADIAVAGGNTATIPFTIKMTNC-PATTTKAAISFNGVPypDPNYASAIYANSAA 116

                         90
                 ....*....|....*...
gi 490278562 113 GIASGIGIALFDSQGQQL 130
Cdd:PRK15293 117 NPAQDLGLQLFNLDGKSL 134
PRK15288 PRK15288
putative minor fimbrial subunit StfG; Provisional
 30-177 4.44e-05

putative minor fimbrial subunit StfG; Provisional


Pssm-ID: 185188 [Multi-domain]  Cd Length: 176  Bit Score: 41.94  E-value: 4.44e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490278562  30 SMRFQGLIMASSCRVE-AGDRQMTVNLGQISSNRFHAVGEDSNPiPFAIHLQDCSTAVSQHVGVTFHGVADGKNPDVLSV 108
Cdd:PRK15288  28 NLHFSGSLVASPCTLTmQGTGIAEVDFSSLDSSDFTPDGQSARK-PLVFELTDCDSALSNGVQVTFTGTEATGMRGILAI 106

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490278562 109 GEGPGiASGIGIALFDSQGQQLPLNRPADRWISLYRGPTTLNFVA-KYRATGRQVTGGAANAQAWFSLTY 177
Cdd:PRK15288 107 DSYSG-ASGIGIGIETLSGVPVGMNDEEGAIFTLVTGKNTLSLNAwVQRLPGEDLIPGRFSASALATFEY 175
PRK15239 PRK15239
putative fimbrial protein StaA; Provisional
 28-178 1.71e-04

putative fimbrial protein StaA; Provisional


Pssm-ID: 185152  Cd Length: 197  Bit Score: 40.48  E-value: 1.71e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490278562  28 GGSMRFQGLIMASSCRV--------EAGDRQMTVNLGQIS--SNRFHAVGEDSNPIPFAIHLqDCSTAVSQHVGVTF--- 94
Cdd:PRK15239  24 GGRINFEGLVSAETCKKvvssavgnSNIDGTVTLKTAHVSdvTAEVQNSTAGVNAEDFSIII-DCSDAGAGLVKSHLtms 102

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490278562  95 ------HGVADgkNPDVLSVGeGPGIASGIGIALFD----SQGQQLPLNRPAD-RWISLYRGPTTLNFVAKYRAT---GR 160
Cdd:PRK15239 103 ssfsntKGTLD--NDETLTRS-GIEAAKAVDIAVHHvddaNALSLVKINDPSNtMEESFTNGIATYNFKASYVKSsdaGA 179

                        170
                 ....*....|....*...
gi 490278562 161 QVTGGAANAQAWFSLTYQ 178
Cdd:PRK15239 180 SVTTGLVSTNAIYTFTYE 197
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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