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MULTISPECIES: choline BCCT transporter BetT [Enterobacterales]
Protein Classification
BCCT family transporter ( domain architecture ID 10003438 )
BCCT (betaine-carnitine-choline transporter) family transporter shares the common functional feature of transporting molecules with a quaternary ammonium group [R-N+(CH3)3]; energized by pmf-driven proton symport; similar to Bacillus subtilis glycine betaine transporter OpuD
List of domain hits
Name
Accession
Description
Interval
E-value
BetT
COG1292 Choline-glycine betaine transporter [Cell wall/membrane/envelope biogenesis];
1-510
0e+00
Choline-glycine betaine transporter [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 440903
Cd Length: 512
Bit Score: 692.66
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490282193 1 MSD NDTIPK K S ts Q I NKA VF FT SALLI FLL V AFAAV FP DV A DKNFKLLQQQ I F TN AS WFY I L A V A L ILLSVTF L GL S R YG 80
Cdd:COG1292 1 MSD KNKEKF K K -- K I DPP VF IP SALLI LAF V LWGLL FP EA A GAVLNAAFSW I T TN FG WFY L L L V L L FVVFCLY L AF S K YG 78
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490282193 81 D I K LG P D H A Q P D FS YH SWFAMLFSAGMGIGL M F F GVAEP VM H Y LSPP V G - T P ETVA AA KE AM RL TFFHWGLHAWAIYA I V 159
Cdd:COG1292 79 K I R LG G D D A K P E FS TF SWFAMLFSAGMGIGL V F W GVAEP LY H F LSPP P G v E P GSPE AA RW AM AY TFFHWGLHAWAIYA L V 158
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490282193 160 A L I LA F F S YR H GLPLT LR SALYP II GDRIYGP V G HAV DI F AV IG TVFGVATSLG Y G V LQ V NAGLN H LFG V P INE TVQ V I L 239
Cdd:COG1292 159 G L A LA Y F A YR R GLPLT IS SALYP LL GDRIYGP I G KVI DI L AV FA TVFGVATSLG L G A LQ I NAGLN Y LFG I P NSL TVQ I I I 238
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490282193 240 I V VIT G L A TIS V VSGLDKGI RI LS E LN LG LALLLL AL VL CL GPT VLL L KS FV ENT G G YL SEL V SKTFNLY AY EP ks SK WL 319
Cdd:COG1292 239 I A VIT A L F TIS A VSGLDKGI KR LS N LN MV LALLLL LF VL IV GPT LFI L NL FV QSL G D YL QNF V PMSLWTD AY GD -- TG WL 316
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490282193 320 GGWT LL YW G WW LS W S PFVG M FIAR V SRGRTIREFV T GVL F VP AG FT LM W MT VFG NS AI Y L IM N q G AT DLA NT V QQD V AL A 399
Cdd:COG1292 317 GGWT VF YW A WW IA W A PFVG L FIAR I SRGRTIREFV L GVL L VP TL FT FL W FS VFG GT AI H L EL N - G GG DLA EA V AAG V EA A 395
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490282193 400 LF NF LE HF P FSSV LS FI A MAM VI V FFVTSADSG AM V VDT L AT GG VANT P V WQRIFW AS L M G I VA IA LLLAGGLSALQT VT 479
Cdd:COG1292 396 LF AL LE QL P LGTI LS VL A IIL VI I FFVTSADSG SL V LAM L TS GG DEEP P R WQRIFW GV L I G L VA AV LLLAGGLSALQT AS 475
490 500 510
....*....|....*....|....*....|.
gi 490282193 480 I AS ALPFS VI LL ISIYG L L KALR R D LTKRE S 510
Cdd:COG1292 476 I IT ALPFS FV LL LMCVS L V KALR E D PRRLR S 506
Name
Accession
Description
Interval
E-value
BetT
COG1292 Choline-glycine betaine transporter [Cell wall/membrane/envelope biogenesis];
1-510
0e+00
Choline-glycine betaine transporter [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 440903
Cd Length: 512
Bit Score: 692.66
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490282193 1 MSD NDTIPK K S ts Q I NKA VF FT SALLI FLL V AFAAV FP DV A DKNFKLLQQQ I F TN AS WFY I L A V A L ILLSVTF L GL S R YG 80
Cdd:COG1292 1 MSD KNKEKF K K -- K I DPP VF IP SALLI LAF V LWGLL FP EA A GAVLNAAFSW I T TN FG WFY L L L V L L FVVFCLY L AF S K YG 78
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490282193 81 D I K LG P D H A Q P D FS YH SWFAMLFSAGMGIGL M F F GVAEP VM H Y LSPP V G - T P ETVA AA KE AM RL TFFHWGLHAWAIYA I V 159
Cdd:COG1292 79 K I R LG G D D A K P E FS TF SWFAMLFSAGMGIGL V F W GVAEP LY H F LSPP P G v E P GSPE AA RW AM AY TFFHWGLHAWAIYA L V 158
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490282193 160 A L I LA F F S YR H GLPLT LR SALYP II GDRIYGP V G HAV DI F AV IG TVFGVATSLG Y G V LQ V NAGLN H LFG V P INE TVQ V I L 239
Cdd:COG1292 159 G L A LA Y F A YR R GLPLT IS SALYP LL GDRIYGP I G KVI DI L AV FA TVFGVATSLG L G A LQ I NAGLN Y LFG I P NSL TVQ I I I 238
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490282193 240 I V VIT G L A TIS V VSGLDKGI RI LS E LN LG LALLLL AL VL CL GPT VLL L KS FV ENT G G YL SEL V SKTFNLY AY EP ks SK WL 319
Cdd:COG1292 239 I A VIT A L F TIS A VSGLDKGI KR LS N LN MV LALLLL LF VL IV GPT LFI L NL FV QSL G D YL QNF V PMSLWTD AY GD -- TG WL 316
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490282193 320 GGWT LL YW G WW LS W S PFVG M FIAR V SRGRTIREFV T GVL F VP AG FT LM W MT VFG NS AI Y L IM N q G AT DLA NT V QQD V AL A 399
Cdd:COG1292 317 GGWT VF YW A WW IA W A PFVG L FIAR I SRGRTIREFV L GVL L VP TL FT FL W FS VFG GT AI H L EL N - G GG DLA EA V AAG V EA A 395
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490282193 400 LF NF LE HF P FSSV LS FI A MAM VI V FFVTSADSG AM V VDT L AT GG VANT P V WQRIFW AS L M G I VA IA LLLAGGLSALQT VT 479
Cdd:COG1292 396 LF AL LE QL P LGTI LS VL A IIL VI I FFVTSADSG SL V LAM L TS GG DEEP P R WQRIFW GV L I G L VA AV LLLAGGLSALQT AS 475
490 500 510
....*....|....*....|....*....|.
gi 490282193 480 I AS ALPFS VI LL ISIYG L L KALR R D LTKRE S 510
Cdd:COG1292 476 I IT ALPFS FV LL LMCVS L V KALR E D PRRLR S 506
PRK09928
PRK09928 choline transport protein BetT; Provisional
1-665
0e+00
choline transport protein BetT; Provisional
Pssm-ID: 236635
Cd Length: 679
Bit Score: 682.96
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490282193 1 M S D NDTIPK K ST sq IN KA VF F TSA L LI F L LVAFAAV F P D VADKNFKLLQQQIFTNAS W F Y I LA VA L ILLS V T F LGL SR Y G 80
Cdd:PRK09928 3 M T D LSHKRE K DR -- IN PV VF Y TSA G LI L L FSLTTIL F T D FSNRWINRTLNWVSKTFG W Y Y L LA AT L YIVF V I F IAC SR F G 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490282193 81 D IKLGP DHAQ P D FS YH SW F AMLF S AG M GI G LMFF G VAEPV MH Y LS PP V G TPE T VA AA KE AM RL T F FH W GL HA W AI YA IVA 160
Cdd:PRK09928 81 S IKLGP EQSK P E FS LL SW A AMLF A AG I GI D LMFF S VAEPV TQ Y MQ PP E G AGQ T IE AA RQ AM VW T L FH Y GL TG W SM YA LMG 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490282193 161 LI L AF FSYR HG LPLT L RSALYPI I G D RI Y GP V GH A VDI F AVIGT V FG V AT S LG Y GV L Q V N A GL NH LF GV P INETV Q VI LI 240
Cdd:PRK09928 161 MA L GY FSYR YN LPLT I RSALYPI F G K RI N GP I GH S VDI A AVIGT I FG I AT T LG I GV V Q L N Y GL SV LF DI P ESLAA Q AA LI 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490282193 241 VVITGL ATISV V SG LD KGIR I LSELN LG LAL L L LAL VL CL G P T VL LL KSF V E N T G G Y LSELVSK T F N LY A YEP k SSK W LG 320
Cdd:PRK09928 241 ALSVII ATISV T SG VN KGIR V LSELN VL LAL G L ILF VL FM G D T SF LL NAL V L N V G D Y VNRFMGM T L N SF A FDR - PTE W MN 319
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490282193 321 G WTL LY W G WW LS WSPFVG M F I AR V SRGRTIR E FV T G V L FV P AG FTL M W MTV FGNSA I Y L I MN q G ATDL A NTVQQDVALAL 400
Cdd:PRK09928 320 N WTL FF W A WW VA WSPFVG L F L AR I SRGRTIR Q FV L G T L II P FT FTL L W LSI FGNSA L Y E I IH - G NAAF A EEAMAHPERGF 398
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490282193 401 FNF L EHF P FSSVLSFI A MAMVIV F F VTSADSGA M V VDTL a T GGVAN ---- T P V W Q R I FW ASLM G IVAIAL L LAG G L SALQ 476
Cdd:PRK09928 399 YSL L AQY P AFTFSASV A TITGLL F Y VTSADSGA L V LGNF - T SKLKD insd A P N W L R V FW SVAI G LLTLGM L MTN G I SALQ 477
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490282193 477 TV T IASA LPFS VILLISIY GL L K A L RRDLTK R E S LSMA T I - APTAARNPIP W QR RL RNIAYL P KRSLVK R FM D D V IQ PAM 555
Cdd:PRK09928 478 NT T VIMG LPFS FVIFFVMA GL Y K S L KVEDYR R A S ANRD T A p RLVGLQDRLN W KQ RL SRVMNY P GTRYTR R ML D T V CR PAM 557
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490282193 556 TL V QE EL NKQ G TISHIS -- DAV ED R ---- IR L E V D LG N E L NF I Y EVRLRG YS S P T F ALA A mdnne QQTEQH r YYR A E VY L 629
Cdd:PRK09928 558 EE V AQ EL RLR G AYVELN el PPE ED E rlgh LD L L V H LG D E Q NF V Y QIWPQR YS V P G F TYR A ----- RSGKST - YYR L E TF L 631
650 660 670
....*....|....*....|....*....|....*.
gi 490282193 630 K EG G Q NY D V M GWNQ EQ L INDILDQYE K HL H FLHL V R 665
Cdd:PRK09928 632 L EG S Q GN D L M DYSK EQ V INDILDQYE R HL N FLHL H R 667
BCCT
pfam02028 BCCT, betaine/carnitine/choline family transporter;
19-504
0e+00
BCCT, betaine/carnitine/choline family transporter;
Pssm-ID: 460420
Cd Length: 485
Bit Score: 634.19
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490282193 19 VF FT SA L LI FLL V AFAAV FP DVADKNFKLLQQQ I FT N AS WFY I L A V ALI L LSVT FL GL SRYG D I K LG P D HAQ P D FS YH SW 98
Cdd:pfam02028 1 VF AV SA G LI LAF V LLGLI FP EALSAVVNTALDW I TD N FG WFY L L L V LIF L VFAL FL AF SRYG N I R LG G D DDK P E FS TF SW 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490282193 99 FAMLF S AGMGIGL M F F GVAEP VM HYLS - PP V G T P E T VA AA KE AM RL TFFHWGLHAWAIYA I VAL I LA F F S YR H GLPL TLR 177
Cdd:pfam02028 81 FAMLF A AGMGIGL V F W GVAEP LS HYLS p PP G G E P G T PE AA QQ AM AY TFFHWGLHAWAIYA L VAL A LA Y F A YR K GLPL LIS 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490282193 178 SALYP II GDRI Y GP V G H A V DI F A V I G TVFGVATSLG Y G V LQ V NAGL NH LFG V P INE T V Q VIL I VV IT G L A TIS V VSGLDK 257
Cdd:pfam02028 161 SALYP LL GDRI D GP I G K A I DI L A I I A TVFGVATSLG L G A LQ I NAGL SY LFG I P NTL T T Q LAI I AI IT A L F TIS A VSGLDK 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490282193 258 GI RI LS E LN LG LA LL LL AL VL CL GPT VLL L KS FV ENT G G YL SEL V SKT F NLYAYEP k SSK WLGGWT LL YW G WW LS W S PFV 337
Cdd:pfam02028 241 GI KR LS N LN MY LA VA LL LF VL IA GPT LFI L NT FV QSL G D YL QNF V PMS F YTDPFGD - TGG WLGGWT IF YW A WW IA W A PFV 319
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490282193 338 GMFIAR V SRGRTIREF VT GVL F VP AG FT LM W MT VFG NS AIYL IM N q G AT DLA NT V QQDVAL ALF NF LE HF P FSSV LS FI A 417
Cdd:pfam02028 320 GMFIAR I SRGRTIREF IL GVL L VP TL FT FL W FS VFG GT AIYL EL N - G PG DLA DA V EAGPPA ALF AL LE QL P LGTI LS VL A 398
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490282193 418 MAMV I V FFVTSADSG AM V VDT L AT GG VA N T P V WQR I FW AS L M G I VA IA LLLAGGL S ALQ TVT I AS ALPFS V ILL ISIYG L 497
Cdd:pfam02028 399 LLLI I I FFVTSADSG TL V IAM L SS GG DL N P P R WQR V FW GV L L G A VA AV LLLAGGL E ALQ SAS I IA ALPFS F ILL LMCIS L 478
....*..
gi 490282193 498 L KALR RD 504
Cdd:pfam02028 479 F KALR EE 485
bcct
TIGR00842 choline/carnitine/betaine transport; The Betaine/Carnitine/Choline Transporter (BCCT) Family ...
57-504
8.87e-164
choline/carnitine/betaine transport; The Betaine/Carnitine/Choline Transporter (BCCT) Family (TC 2.A.15) Proteins of the BCCT family share the common functional feature of transporting molecules with a quaternary ammonium group [R-N+(CH3)3]. The BCCT family includes transporters for carnitine, choline and glycine betaine. BCCT transporters have 12 putative TMS, and are energized by pmf-driven proton symport. Some of these permeases exhibit osmosensory and osmoregulatory properties inherent to their polypeptide chains. [Transport and binding proteins, Other]
Pssm-ID: 213565
Cd Length: 452
Bit Score: 477.62
E-value: 8.87e-164
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490282193 57 S W F YIL A V A L I L LS V TFLGL SRYG D I K LG P D HAQ P D FS YH SW F AMLF S AGMG I GLMF F GVAEP VMH YL S PP V G T - P ETVA 135
Cdd:TIGR00842 1 G W A YIL T V T L F L GF V LYIAF SRYG K I R LG R D DEK P E FS TL SW L AMLF A AGMG A GLMF W GVAEP LTY YL T PP F G A g P TSTT 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490282193 136 A AKE A MRL T F FHWG L H A WAIYA I V A L I LA F F SY R H GLPL T L R SAL Y P II G DRIY GP V G H A V DI F A VIG TVFGVATSLG Y G 215
Cdd:TIGR00842 81 A QEQ A LAY T L FHWG I H P WAIYA L V G L A LA Y F HF R K GLPL R L S SAL V P LL G EKVN GP I G K A I DI L A LVA TVFGVATSLG L G 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490282193 216 VL Q V NAGL NH LFG V P INETV Q VIL I VVI T G LA T ISV V SG LD KGI R ILS EL N LG LA L LLL AL VL CL GPTV L LL K SFV ENT G 295
Cdd:TIGR00842 161 AP Q I NAGL SA LFG I P DSFWL Q ALI I LCV T A LA C ISV A SG VG KGI K ILS NI N MA LA F LLL LF VL IV GPTV F LL N SFV DSI G 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490282193 296 G YL SELVSKT F NLYAYEP K SS k W L GGWT LL YW G WW L SWSPFVGMFIAR V SRGRTIREF VT GVL FV P AG FT LM W MT VFGNS 375
Cdd:TIGR00842 241 N YL QNFPQMS F RTDPDDG K GG - W P GGWT VF YW A WW I SWSPFVGMFIAR I SRGRTIREF IF GVL LG P TA FT WL W FS VFGNS 319
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490282193 376 A IY L IM N Q G ATDLANT V QQDV A L ALF NF L EHF P FSSVLSFI A MAMV I V FF V TSADS GAM V VDTLATG G VAN --- T P V W Q R 452
Cdd:TIGR00842 320 A LL L QQ N G G FINGPFV V ETNG A R ALF GL L AAL P LGTITMAL A LILI I I FF I TSADS ASL V LANTTSR G GQL gee P P K W V R 399
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 490282193 453 I FWA SLM G IV A IA LL LA - G G L S ALQT V TI AS ALPFS VIL L ISIYG L L K A L RR D 504
Cdd:TIGR00842 400 V FWA VAI G LI A LV LL FS g G S L A ALQT T TI IA ALPFS FVM L VVMFS L I K D L KQ D 452
Name
Accession
Description
Interval
E-value
BetT
COG1292 Choline-glycine betaine transporter [Cell wall/membrane/envelope biogenesis];
1-510
0e+00
Choline-glycine betaine transporter [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 440903
Cd Length: 512
Bit Score: 692.66
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490282193 1 MSD NDTIPK K S ts Q I NKA VF FT SALLI FLL V AFAAV FP DV A DKNFKLLQQQ I F TN AS WFY I L A V A L ILLSVTF L GL S R YG 80
Cdd:COG1292 1 MSD KNKEKF K K -- K I DPP VF IP SALLI LAF V LWGLL FP EA A GAVLNAAFSW I T TN FG WFY L L L V L L FVVFCLY L AF S K YG 78
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490282193 81 D I K LG P D H A Q P D FS YH SWFAMLFSAGMGIGL M F F GVAEP VM H Y LSPP V G - T P ETVA AA KE AM RL TFFHWGLHAWAIYA I V 159
Cdd:COG1292 79 K I R LG G D D A K P E FS TF SWFAMLFSAGMGIGL V F W GVAEP LY H F LSPP P G v E P GSPE AA RW AM AY TFFHWGLHAWAIYA L V 158
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490282193 160 A L I LA F F S YR H GLPLT LR SALYP II GDRIYGP V G HAV DI F AV IG TVFGVATSLG Y G V LQ V NAGLN H LFG V P INE TVQ V I L 239
Cdd:COG1292 159 G L A LA Y F A YR R GLPLT IS SALYP LL GDRIYGP I G KVI DI L AV FA TVFGVATSLG L G A LQ I NAGLN Y LFG I P NSL TVQ I I I 238
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490282193 240 I V VIT G L A TIS V VSGLDKGI RI LS E LN LG LALLLL AL VL CL GPT VLL L KS FV ENT G G YL SEL V SKTFNLY AY EP ks SK WL 319
Cdd:COG1292 239 I A VIT A L F TIS A VSGLDKGI KR LS N LN MV LALLLL LF VL IV GPT LFI L NL FV QSL G D YL QNF V PMSLWTD AY GD -- TG WL 316
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490282193 320 GGWT LL YW G WW LS W S PFVG M FIAR V SRGRTIREFV T GVL F VP AG FT LM W MT VFG NS AI Y L IM N q G AT DLA NT V QQD V AL A 399
Cdd:COG1292 317 GGWT VF YW A WW IA W A PFVG L FIAR I SRGRTIREFV L GVL L VP TL FT FL W FS VFG GT AI H L EL N - G GG DLA EA V AAG V EA A 395
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490282193 400 LF NF LE HF P FSSV LS FI A MAM VI V FFVTSADSG AM V VDT L AT GG VANT P V WQRIFW AS L M G I VA IA LLLAGGLSALQT VT 479
Cdd:COG1292 396 LF AL LE QL P LGTI LS VL A IIL VI I FFVTSADSG SL V LAM L TS GG DEEP P R WQRIFW GV L I G L VA AV LLLAGGLSALQT AS 475
490 500 510
....*....|....*....|....*....|.
gi 490282193 480 I AS ALPFS VI LL ISIYG L L KALR R D LTKRE S 510
Cdd:COG1292 476 I IT ALPFS FV LL LMCVS L V KALR E D PRRLR S 506
PRK09928
PRK09928 choline transport protein BetT; Provisional
1-665
0e+00
choline transport protein BetT; Provisional
Pssm-ID: 236635
Cd Length: 679
Bit Score: 682.96
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490282193 1 M S D NDTIPK K ST sq IN KA VF F TSA L LI F L LVAFAAV F P D VADKNFKLLQQQIFTNAS W F Y I LA VA L ILLS V T F LGL SR Y G 80
Cdd:PRK09928 3 M T D LSHKRE K DR -- IN PV VF Y TSA G LI L L FSLTTIL F T D FSNRWINRTLNWVSKTFG W Y Y L LA AT L YIVF V I F IAC SR F G 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490282193 81 D IKLGP DHAQ P D FS YH SW F AMLF S AG M GI G LMFF G VAEPV MH Y LS PP V G TPE T VA AA KE AM RL T F FH W GL HA W AI YA IVA 160
Cdd:PRK09928 81 S IKLGP EQSK P E FS LL SW A AMLF A AG I GI D LMFF S VAEPV TQ Y MQ PP E G AGQ T IE AA RQ AM VW T L FH Y GL TG W SM YA LMG 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490282193 161 LI L AF FSYR HG LPLT L RSALYPI I G D RI Y GP V GH A VDI F AVIGT V FG V AT S LG Y GV L Q V N A GL NH LF GV P INETV Q VI LI 240
Cdd:PRK09928 161 MA L GY FSYR YN LPLT I RSALYPI F G K RI N GP I GH S VDI A AVIGT I FG I AT T LG I GV V Q L N Y GL SV LF DI P ESLAA Q AA LI 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490282193 241 VVITGL ATISV V SG LD KGIR I LSELN LG LAL L L LAL VL CL G P T VL LL KSF V E N T G G Y LSELVSK T F N LY A YEP k SSK W LG 320
Cdd:PRK09928 241 ALSVII ATISV T SG VN KGIR V LSELN VL LAL G L ILF VL FM G D T SF LL NAL V L N V G D Y VNRFMGM T L N SF A FDR - PTE W MN 319
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490282193 321 G WTL LY W G WW LS WSPFVG M F I AR V SRGRTIR E FV T G V L FV P AG FTL M W MTV FGNSA I Y L I MN q G ATDL A NTVQQDVALAL 400
Cdd:PRK09928 320 N WTL FF W A WW VA WSPFVG L F L AR I SRGRTIR Q FV L G T L II P FT FTL L W LSI FGNSA L Y E I IH - G NAAF A EEAMAHPERGF 398
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490282193 401 FNF L EHF P FSSVLSFI A MAMVIV F F VTSADSGA M V VDTL a T GGVAN ---- T P V W Q R I FW ASLM G IVAIAL L LAG G L SALQ 476
Cdd:PRK09928 399 YSL L AQY P AFTFSASV A TITGLL F Y VTSADSGA L V LGNF - T SKLKD insd A P N W L R V FW SVAI G LLTLGM L MTN G I SALQ 477
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490282193 477 TV T IASA LPFS VILLISIY GL L K A L RRDLTK R E S LSMA T I - APTAARNPIP W QR RL RNIAYL P KRSLVK R FM D D V IQ PAM 555
Cdd:PRK09928 478 NT T VIMG LPFS FVIFFVMA GL Y K S L KVEDYR R A S ANRD T A p RLVGLQDRLN W KQ RL SRVMNY P GTRYTR R ML D T V CR PAM 557
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490282193 556 TL V QE EL NKQ G TISHIS -- DAV ED R ---- IR L E V D LG N E L NF I Y EVRLRG YS S P T F ALA A mdnne QQTEQH r YYR A E VY L 629
Cdd:PRK09928 558 EE V AQ EL RLR G AYVELN el PPE ED E rlgh LD L L V H LG D E Q NF V Y QIWPQR YS V P G F TYR A ----- RSGKST - YYR L E TF L 631
650 660 670
....*....|....*....|....*....|....*.
gi 490282193 630 K EG G Q NY D V M GWNQ EQ L INDILDQYE K HL H FLHL V R 665
Cdd:PRK09928 632 L EG S Q GN D L M DYSK EQ V INDILDQYE R HL N FLHL H R 667
BCCT
pfam02028 BCCT, betaine/carnitine/choline family transporter;
19-504
0e+00
BCCT, betaine/carnitine/choline family transporter;
Pssm-ID: 460420
Cd Length: 485
Bit Score: 634.19
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490282193 19 VF FT SA L LI FLL V AFAAV FP DVADKNFKLLQQQ I FT N AS WFY I L A V ALI L LSVT FL GL SRYG D I K LG P D HAQ P D FS YH SW 98
Cdd:pfam02028 1 VF AV SA G LI LAF V LLGLI FP EALSAVVNTALDW I TD N FG WFY L L L V LIF L VFAL FL AF SRYG N I R LG G D DDK P E FS TF SW 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490282193 99 FAMLF S AGMGIGL M F F GVAEP VM HYLS - PP V G T P E T VA AA KE AM RL TFFHWGLHAWAIYA I VAL I LA F F S YR H GLPL TLR 177
Cdd:pfam02028 81 FAMLF A AGMGIGL V F W GVAEP LS HYLS p PP G G E P G T PE AA QQ AM AY TFFHWGLHAWAIYA L VAL A LA Y F A YR K GLPL LIS 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490282193 178 SALYP II GDRI Y GP V G H A V DI F A V I G TVFGVATSLG Y G V LQ V NAGL NH LFG V P INE T V Q VIL I VV IT G L A TIS V VSGLDK 257
Cdd:pfam02028 161 SALYP LL GDRI D GP I G K A I DI L A I I A TVFGVATSLG L G A LQ I NAGL SY LFG I P NTL T T Q LAI I AI IT A L F TIS A VSGLDK 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490282193 258 GI RI LS E LN LG LA LL LL AL VL CL GPT VLL L KS FV ENT G G YL SEL V SKT F NLYAYEP k SSK WLGGWT LL YW G WW LS W S PFV 337
Cdd:pfam02028 241 GI KR LS N LN MY LA VA LL LF VL IA GPT LFI L NT FV QSL G D YL QNF V PMS F YTDPFGD - TGG WLGGWT IF YW A WW IA W A PFV 319
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490282193 338 GMFIAR V SRGRTIREF VT GVL F VP AG FT LM W MT VFG NS AIYL IM N q G AT DLA NT V QQDVAL ALF NF LE HF P FSSV LS FI A 417
Cdd:pfam02028 320 GMFIAR I SRGRTIREF IL GVL L VP TL FT FL W FS VFG GT AIYL EL N - G PG DLA DA V EAGPPA ALF AL LE QL P LGTI LS VL A 398
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490282193 418 MAMV I V FFVTSADSG AM V VDT L AT GG VA N T P V WQR I FW AS L M G I VA IA LLLAGGL S ALQ TVT I AS ALPFS V ILL ISIYG L 497
Cdd:pfam02028 399 LLLI I I FFVTSADSG TL V IAM L SS GG DL N P P R WQR V FW GV L L G A VA AV LLLAGGL E ALQ SAS I IA ALPFS F ILL LMCIS L 478
....*..
gi 490282193 498 L KALR RD 504
Cdd:pfam02028 479 F KALR EE 485
bcct
TIGR00842 choline/carnitine/betaine transport; The Betaine/Carnitine/Choline Transporter (BCCT) Family ...
57-504
8.87e-164
choline/carnitine/betaine transport; The Betaine/Carnitine/Choline Transporter (BCCT) Family (TC 2.A.15) Proteins of the BCCT family share the common functional feature of transporting molecules with a quaternary ammonium group [R-N+(CH3)3]. The BCCT family includes transporters for carnitine, choline and glycine betaine. BCCT transporters have 12 putative TMS, and are energized by pmf-driven proton symport. Some of these permeases exhibit osmosensory and osmoregulatory properties inherent to their polypeptide chains. [Transport and binding proteins, Other]
Pssm-ID: 213565
Cd Length: 452
Bit Score: 477.62
E-value: 8.87e-164
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490282193 57 S W F YIL A V A L I L LS V TFLGL SRYG D I K LG P D HAQ P D FS YH SW F AMLF S AGMG I GLMF F GVAEP VMH YL S PP V G T - P ETVA 135
Cdd:TIGR00842 1 G W A YIL T V T L F L GF V LYIAF SRYG K I R LG R D DEK P E FS TL SW L AMLF A AGMG A GLMF W GVAEP LTY YL T PP F G A g P TSTT 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490282193 136 A AKE A MRL T F FHWG L H A WAIYA I V A L I LA F F SY R H GLPL T L R SAL Y P II G DRIY GP V G H A V DI F A VIG TVFGVATSLG Y G 215
Cdd:TIGR00842 81 A QEQ A LAY T L FHWG I H P WAIYA L V G L A LA Y F HF R K GLPL R L S SAL V P LL G EKVN GP I G K A I DI L A LVA TVFGVATSLG L G 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490282193 216 VL Q V NAGL NH LFG V P INETV Q VIL I VVI T G LA T ISV V SG LD KGI R ILS EL N LG LA L LLL AL VL CL GPTV L LL K SFV ENT G 295
Cdd:TIGR00842 161 AP Q I NAGL SA LFG I P DSFWL Q ALI I LCV T A LA C ISV A SG VG KGI K ILS NI N MA LA F LLL LF VL IV GPTV F LL N SFV DSI G 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490282193 296 G YL SELVSKT F NLYAYEP K SS k W L GGWT LL YW G WW L SWSPFVGMFIAR V SRGRTIREF VT GVL FV P AG FT LM W MT VFGNS 375
Cdd:TIGR00842 241 N YL QNFPQMS F RTDPDDG K GG - W P GGWT VF YW A WW I SWSPFVGMFIAR I SRGRTIREF IF GVL LG P TA FT WL W FS VFGNS 319
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490282193 376 A IY L IM N Q G ATDLANT V QQDV A L ALF NF L EHF P FSSVLSFI A MAMV I V FF V TSADS GAM V VDTLATG G VAN --- T P V W Q R 452
Cdd:TIGR00842 320 A LL L QQ N G G FINGPFV V ETNG A R ALF GL L AAL P LGTITMAL A LILI I I FF I TSADS ASL V LANTTSR G GQL gee P P K W V R 399
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 490282193 453 I FWA SLM G IV A IA LL LA - G G L S ALQT V TI AS ALPFS VIL L ISIYG L L K A L RR D 504
Cdd:TIGR00842 400 V FWA VAI G LI A LV LL FS g G S L A ALQT T TI IA ALPFS FVM L VVMFS L I K D L KQ D 452
PRK09950
PRK09950 putative transporter; Provisional
14-504
6.59e-61
putative transporter; Provisional
Pssm-ID: 236636
Cd Length: 506
Bit Score: 211.96
E-value: 6.59e-61
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490282193 14 QIN K AVFF TS A L LI F LL VA FAAV FP D ---- V A DKN F KLLQQQIFTNASW F YI LA VA L I L lsvt F L GL S R YG D I K LG pd HA 89
Cdd:PRK09950 7 KKD K PLIS TS L L AV F FI VA ALSL FP Q qsaa A A NTI F QWVTRTFGSPVQL F VL LA MI L V L ---- Y L AT S K YG N I R LG -- EG 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490282193 90 Q P DF S YH SW FA M LFS AG M G IGLMFF GV A E PVMH Y LS P PVG - T P ETVA A AKEAMRLT FFHWG LH AWA I YA IVA LI L A F - F S 167
Cdd:PRK09950 81 K P EY S TL SW LF M FIC AG L G SSTLYW GV M E WAYY Y QT P GLN i A P RSPK A LEYSVSYS FFHWG IS AWA T YA LAS LI M A Y h F H 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490282193 168 Y R HGLP L T L RSALYP I I G DRIY GP V G HA VD IFAV I G TV FGVAT SL GYGVLQVNA GL NH L F G V P I N E TVQ VIL I VVITGLA 247
Cdd:PRK09950 161 V R KNKG L S L SGIIAA I T G VKPQ GP W G RL VD LMFL I A TV GALTI SL VVTAATFTR GL SA L T G L P N N F TVQ AFV I LLSGVIF 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490282193 248 TI S VVS G L D K G IRI LS ELNLGL A L L LLA LVL CL GPT VLLLKSFVENT G GYLSELVS kt FN L YAYEPKSSKWLGG WT LL YW 327
Cdd:PRK09950 241 CL S SYI G I D N G LQR LS KMVGWG A F L FAL LVL IV GPT EFITNNIINSI G LTTQNFLQ -- MS L FTDPMGDGSFTRN WT VF YW 318
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490282193 328 G WW L S WS P F V G MF IA RVSRGR T I R E FVT G VLFVPAGFTLMWMT V FGNS AI YLIM N q G ATD --- LA NT VQQDV A LA lf NF L 404
Cdd:PRK09950 319 L WW I S YT P G V A MF VT RVSRGR K I K E VIW G LILGSSVGCWFFFG V LESY AI HQFI N - G VIN vpq IL NT LGGET A VQ -- QL L 395
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490282193 405 EHF P FSSVLSFIAMAMV I V F FVTSA D SG A MVVDTLA T GGVAN ---- TPV w Q R I FW ASLMGIVAIAL L LA G GLS - ALQ T VT 479
Cdd:PRK09950 396 SSL P AGKLFLAAYLGIM I I F LASHM D AV A YTMAATS T RNLRE gddp DRG - L R L FW CVVITLIPLSI L FT G ASL d TMK T TV 474
490 500
....*....|....*....|....*
gi 490282193 480 IAS ALPF S VILLI SI YG LLKA L RR D 504
Cdd:PRK09950 475 VLT ALPF L VILLI KV YG FIRW L KQ D 499
PRK03356
PRK03356 L-carnitine/gamma-butyrobetaine antiport BCCT transporter;
9-502
4.36e-59
L-carnitine/gamma-butyrobetaine antiport BCCT transporter;
Pssm-ID: 179568
Cd Length: 504
Bit Score: 206.89
E-value: 4.36e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490282193 9 K K STSQ I NKA VFF TSALLIFL L VAFAAVFP D V A DKNFKLLQQQIFTNAS W FYILAVALI L LSVTF L GLSR Y GDIK LG PD h 88
Cdd:PRK03356 4 E K KKTG I EPK VFF PPLIIVGI L CWLTVRDL D A A NVVINAVFSYVTNVWG W AFEWYMVVM L FGWFW L VFGP Y AKKR LG DE - 82
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490282193 89 a Q P D FS YH SW FA M L F SAGMGIGLM F F G VA E PVMHYLS PP V G - T P ETVA A AKEAMRLTF FHWG LHA WA I Y AIVALILAF F S 167
Cdd:PRK03356 83 - K P E FS TA SW IF M M F ASCTSAAVL F W G SI E IYYYIST PP F G l E P NSTG A KELGLAYSL FHWG PLP WA T Y SFLSVAFGY F F 161
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490282193 168 YRHGLPLTLR S - A L Y P II G DR - IY G PV G HA VD I F AVIGTV F GVA TSLG YGVLQ V NAGLNH LFG V P INETVQV I L I VVITG 245
Cdd:PRK03356 162 FVRKMDVIRP S s T L V P LV G EK h AK G LF G TI VD N F YLVALI F AMG TSLG LATPL V TECMQW LFG I P HTLQLDA I I I TCWII 241
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490282193 246 L AT I S V VS GL D KG I RI L S ELNLG L AL L L L AL V LCL G P T VLLLKS F VENT G GY L SE L VSKT F NLYAY ep KSSKWLG GWT LL 325
Cdd:PRK03356 242 L NA I C V AC GL Q KG V RI A S DVRSY L SF L M L GW V FIV G G T SFIMNY F TDSV G ML L MY L PRML F YTDPI -- GKGGFPQ GWT VF 319
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490282193 326 YW G WW LSWSPFVGM F I AR V SRGRT I RE FVT G VLFVPAGF T LMWM TV F G NSAIY L i M NQGATDLA N TVQ Q D - VA L A LFNFL 404
Cdd:PRK03356 320 YW A WW VIYAIQMSI F L AR I SRGRT V RE LCF G MVLGLTAS T WILW TV L G SNTLL L - M DKNIINIP N LIE Q Y g VA R A IIETW 398
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490282193 405 EHF P F S SVLSFIAMAMVIVFF VT SADSG ---- AM VVDTLATG G v ANT P VWQ RI F W AS L M GI VA I A LL LA GGL SAL QT VT I 480
Cdd:PRK03356 399 AAL P L S TATMWGFFILCFIAT VT LINAC sytl AM STCREVRD G - EEP P LLV RI G W SI L V GI IG I V LL AL GGL KPI QT AI I 477
490 500
....*....|....*....|..
gi 490282193 481 A SAL P FSVILLISIYGLL K ALR 502
Cdd:PRK03356 478 A GGC P LFFVNIMVTLSFI K DAK 499
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.21
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
