MULTISPECIES: type IV conjugative transfer system pilin TraA [Gammaproteobacteria]
List of domain hits
Name | Accession | Description | Interval | E-value | |||
TraA super family | cl11503 | TraA; Conjugative transfer of a bacteriocin plasmid, pPD1, of Enterococcus faecalis is induced ... |
1-120 | 7.69e-47 | |||
TraA; Conjugative transfer of a bacteriocin plasmid, pPD1, of Enterococcus faecalis is induced in response to a peptide sex pheromone, cPD1, secreted from plasmid-free recipient cells. cPD1 is taken up by a pPD1 donor cell and binds to an intracellular receptor, TraA. Once a recipient cell acquires pPD1, it starts to produce an inhibitor of cPD1, termed iPD1, which functions as a TraA antagonist and blocks self-induction in donor cells. TraA transduces the signal of cPD1 to the mating response. The actual alignment was detected with superfamily member pfam05513: Pssm-ID: 299752 Cd Length: 120 Bit Score: 146.74 E-value: 7.69e-47
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Name | Accession | Description | Interval | E-value | |||
TraA | pfam05513 | TraA; Conjugative transfer of a bacteriocin plasmid, pPD1, of Enterococcus faecalis is induced ... |
1-120 | 7.69e-47 | |||
TraA; Conjugative transfer of a bacteriocin plasmid, pPD1, of Enterococcus faecalis is induced in response to a peptide sex pheromone, cPD1, secreted from plasmid-free recipient cells. cPD1 is taken up by a pPD1 donor cell and binds to an intracellular receptor, TraA. Once a recipient cell acquires pPD1, it starts to produce an inhibitor of cPD1, termed iPD1, which functions as a TraA antagonist and blocks self-induction in donor cells. TraA transduces the signal of cPD1 to the mating response. Pssm-ID: 283228 Cd Length: 120 Bit Score: 146.74 E-value: 7.69e-47
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PRK13734 | PRK13734 | conjugal transfer pilin subunit TraA; Provisional |
1-122 | 2.29e-38 | |||
conjugal transfer pilin subunit TraA; Provisional Pssm-ID: 237485 Cd Length: 120 Bit Score: 125.43 E-value: 2.29e-38
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TraA_TIGR | TIGR02758 | type IV conjugative transfer system pilin TraA; TraA is the single structural subunit of the ... |
59-122 | 2.59e-18 | |||
type IV conjugative transfer system pilin TraA; TraA is the single structural subunit of the pilus found in type IV conjugative transfer systems. This family is generally found in gammaproteobacteria. The pilins show considerable heterogeneity among the different conjugative plasmit types. All of them however contain an N-terminal part which is cleaved off by a leader peptidase (LepB, or similar) to result in a 68-78 amino acid product. Pilins may be further processed by acetylation (in F-like systems by the TraX protein) or by cyclization (in P-like systems by the TraF protein). Pssm-ID: 131805 Cd Length: 93 Bit Score: 73.68 E-value: 2.59e-18
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Name | Accession | Description | Interval | E-value | |||
TraA | pfam05513 | TraA; Conjugative transfer of a bacteriocin plasmid, pPD1, of Enterococcus faecalis is induced ... |
1-120 | 7.69e-47 | |||
TraA; Conjugative transfer of a bacteriocin plasmid, pPD1, of Enterococcus faecalis is induced in response to a peptide sex pheromone, cPD1, secreted from plasmid-free recipient cells. cPD1 is taken up by a pPD1 donor cell and binds to an intracellular receptor, TraA. Once a recipient cell acquires pPD1, it starts to produce an inhibitor of cPD1, termed iPD1, which functions as a TraA antagonist and blocks self-induction in donor cells. TraA transduces the signal of cPD1 to the mating response. Pssm-ID: 283228 Cd Length: 120 Bit Score: 146.74 E-value: 7.69e-47
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PRK13734 | PRK13734 | conjugal transfer pilin subunit TraA; Provisional |
1-122 | 2.29e-38 | |||
conjugal transfer pilin subunit TraA; Provisional Pssm-ID: 237485 Cd Length: 120 Bit Score: 125.43 E-value: 2.29e-38
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TraA_TIGR | TIGR02758 | type IV conjugative transfer system pilin TraA; TraA is the single structural subunit of the ... |
59-122 | 2.59e-18 | |||
type IV conjugative transfer system pilin TraA; TraA is the single structural subunit of the pilus found in type IV conjugative transfer systems. This family is generally found in gammaproteobacteria. The pilins show considerable heterogeneity among the different conjugative plasmit types. All of them however contain an N-terminal part which is cleaved off by a leader peptidase (LepB, or similar) to result in a 68-78 amino acid product. Pilins may be further processed by acetylation (in F-like systems by the TraX protein) or by cyclization (in P-like systems by the TraF protein). Pssm-ID: 131805 Cd Length: 93 Bit Score: 73.68 E-value: 2.59e-18
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Blast search parameters | ||||
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