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MULTISPECIES: AsmA family protein [Klebsiella]
Protein Classification
AsmA family protein ( domain architecture ID 1000231 )
AsmA family protein may be involved in the assembly of outer membrane proteins, similar to Escherichia coli AsmA family protein YhjG
List of domain hits
Name
Accession
Description
Interval
E-value
AsmA super family
cl37543 AsmA family; The AsmA gene, whose product is involved in the assembly of outer membrane ...
1-580
2.29e-168
AsmA family; The AsmA gene, whose product is involved in the assembly of outer membrane proteins in Escherichia coli. AsmA mutations were isolated as extragenic suppressors of an OmpF assembly mutant. AsmA may have a role in LPS biogenesis.
pfam05170 :Pssm-ID: 428346 [Multi-domain]
Cd Length: 607
Bit Score: 495.46
E-value: 2.29e-168
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490304022 1 M SRTR K T LV I I TGTI LLL I VL FFIVL A T FD W N RL KPT IN QKVSA EL NRP F AI R GD L G vvwerqpdergw RS WI PWP HVHA 80
Cdd:pfam05170 1 M KKAL K I LV A I LLGL LLL L VL LAALI A L FD P N NY KPT LQ QKVSA AT NRP L AI N GD I G ------------ RS LF PWP TLSL 68
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490304022 81 E DI V L GN P PA i PQVTMIH L PR V EAT L A PL A LL S K TVYLPW I K L EQPDVR L I RL AED N N NW TFQLAGDKRT --------- S 151
Cdd:pfam05170 69 S DI T L AS P QG - DATPLVS L EQ V KIS L S PL P LL R K QIEIDS I R L DGAELA L E RL KQG N W NW QELIQNQQNQ asnaptqqp Q 147
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490304022 152 DDSAPSS WS FRLDN I LFDR G TIA IDDK ITRS ----- DITIL V DP L GK P - LPF S EV T GT - K DRHSAAKP G DY V FGLS L K G R 224
Cdd:pfam05170 148 PTWPVAA WS LPIGR I QVSN G QVT IDDK ASQK ilkdi NLELQ V ST L YG P s FNW S KI T IS g K GDQDPQSF G SQ V NVTI L S G E 227
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490304022 225 YK G QPVT G NGKI GGML A L RSA S A P FPLQGDFHSG N TRVAFS GT VS D P LN VGGI DL R LK FA G --------------- DSL R 289
Cdd:pfam05170 228 IS G EALR G STST GGML L L QTL S S P IYHINSLKLL N AQLELD GT LW D N LN LSIE DL D LK AS G wksitvnlaltadel DSL A 307
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490304022 290 DLYD L T G VL LP E TP SFS T D G R L RAD F TQKN ---------- RMRFN Y QN F N G R -- I G D SDI HG S LTYTTGK PRPKL S G DME 357
Cdd:pfam05170 308 NQAE L P G AN LP D TP QNI T L G E L SLS F KTGR vqvsgslnsl TLNLD Y LS F D G K kw V G S SDI DL S NRLPQPQ PRPKL R G KLS 387
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490304022 358 S KQ L R L AD L G P LIGVDSG K GTKKSAARQADDR p QP A GKV LP ADR F ETDK WQ V MDADV RFKGRRIEHG G t LPISDL S T HVI 437
Cdd:pfam05170 388 S PE L D L DN L L P IKTAVAA K SRAPEWDASGLSA - DG A NLP LP VEP F LWGV WQ G MDADV SANIDKVTYS G - LPISDL K T KLR 465
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490304022 438 L E D G D L R L QPVRF GL AN G SIAGSVH L QGD KKP LQGEANLQ A RRLK LK A L M P NVEM M QK T L G EMNG D VQ L R GSGNSV AA L L 517
Cdd:pfam05170 466 S E G G V L Q L SRLKG GL YG G YLEAGAQ L DLS KKP ATYRLKIN A KNIP LK P L L P DLFK M FS T D G LLDI D AD L Q GSGNSV KM L I 545
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 490304022 518 G NS NG N LKL LMND G LI S rnlmeil G L NVGN Y L ------ IGQI FGD EEVRV NC AAA N IDVTN GV ARPQIF 580
Cdd:pfam05170 546 G SL NG Q LKL NLRN G AL S ------- G I NVGN I L vngiag LTSD FGD KSTPF NC LTL N LNLQR GV VTLNDT 607
Name
Accession
Description
Interval
E-value
AsmA
pfam05170 AsmA family; The AsmA gene, whose product is involved in the assembly of outer membrane ...
1-580
2.29e-168
AsmA family; The AsmA gene, whose product is involved in the assembly of outer membrane proteins in Escherichia coli. AsmA mutations were isolated as extragenic suppressors of an OmpF assembly mutant. AsmA may have a role in LPS biogenesis.
Pssm-ID: 428346 [Multi-domain]
Cd Length: 607
Bit Score: 495.46
E-value: 2.29e-168
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490304022 1 M SRTR K T LV I I TGTI LLL I VL FFIVL A T FD W N RL KPT IN QKVSA EL NRP F AI R GD L G vvwerqpdergw RS WI PWP HVHA 80
Cdd:pfam05170 1 M KKAL K I LV A I LLGL LLL L VL LAALI A L FD P N NY KPT LQ QKVSA AT NRP L AI N GD I G ------------ RS LF PWP TLSL 68
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490304022 81 E DI V L GN P PA i PQVTMIH L PR V EAT L A PL A LL S K TVYLPW I K L EQPDVR L I RL AED N N NW TFQLAGDKRT --------- S 151
Cdd:pfam05170 69 S DI T L AS P QG - DATPLVS L EQ V KIS L S PL P LL R K QIEIDS I R L DGAELA L E RL KQG N W NW QELIQNQQNQ asnaptqqp Q 147
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490304022 152 DDSAPSS WS FRLDN I LFDR G TIA IDDK ITRS ----- DITIL V DP L GK P - LPF S EV T GT - K DRHSAAKP G DY V FGLS L K G R 224
Cdd:pfam05170 148 PTWPVAA WS LPIGR I QVSN G QVT IDDK ASQK ilkdi NLELQ V ST L YG P s FNW S KI T IS g K GDQDPQSF G SQ V NVTI L S G E 227
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490304022 225 YK G QPVT G NGKI GGML A L RSA S A P FPLQGDFHSG N TRVAFS GT VS D P LN VGGI DL R LK FA G --------------- DSL R 289
Cdd:pfam05170 228 IS G EALR G STST GGML L L QTL S S P IYHINSLKLL N AQLELD GT LW D N LN LSIE DL D LK AS G wksitvnlaltadel DSL A 307
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490304022 290 DLYD L T G VL LP E TP SFS T D G R L RAD F TQKN ---------- RMRFN Y QN F N G R -- I G D SDI HG S LTYTTGK PRPKL S G DME 357
Cdd:pfam05170 308 NQAE L P G AN LP D TP QNI T L G E L SLS F KTGR vqvsgslnsl TLNLD Y LS F D G K kw V G S SDI DL S NRLPQPQ PRPKL R G KLS 387
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490304022 358 S KQ L R L AD L G P LIGVDSG K GTKKSAARQADDR p QP A GKV LP ADR F ETDK WQ V MDADV RFKGRRIEHG G t LPISDL S T HVI 437
Cdd:pfam05170 388 S PE L D L DN L L P IKTAVAA K SRAPEWDASGLSA - DG A NLP LP VEP F LWGV WQ G MDADV SANIDKVTYS G - LPISDL K T KLR 465
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490304022 438 L E D G D L R L QPVRF GL AN G SIAGSVH L QGD KKP LQGEANLQ A RRLK LK A L M P NVEM M QK T L G EMNG D VQ L R GSGNSV AA L L 517
Cdd:pfam05170 466 S E G G V L Q L SRLKG GL YG G YLEAGAQ L DLS KKP ATYRLKIN A KNIP LK P L L P DLFK M FS T D G LLDI D AD L Q GSGNSV KM L I 545
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 490304022 518 G NS NG N LKL LMND G LI S rnlmeil G L NVGN Y L ------ IGQI FGD EEVRV NC AAA N IDVTN GV ARPQIF 580
Cdd:pfam05170 546 G SL NG Q LKL NLRN G AL S ------- G I NVGN I L vngiag LTSD FGD KSTPF NC LTL N LNLQR GV VTLNDT 607
AsmA
COG2982 Uncharacterized conserved protein AsmA involved in outer membrane biogenesis [Cell wall ...
1-546
3.54e-132
Uncharacterized conserved protein AsmA involved in outer membrane biogenesis [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442221 [Multi-domain]
Cd Length: 491
Bit Score: 398.64
E-value: 3.54e-132
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490304022 1 MSRTRKT L V I ITGTIL LL IVLFFIVLAT FDWNRL K P T I NQK VS AELN R PFA I R GDL GV vwerqpdergwr S WI PWP H V HA 80
Cdd:COG2982 1 KRLMKRL L I I LAILLV LL VAALVALPLL FDWNRL R P L I ERQ VS EATG R EVT I D GDL SL ------------ S LF PWP G V TL 68
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490304022 81 E D IV L G NP PAIPQVTMIHLP R V E AT LA P L A LLS KTVYLPW I K L EQ P DVR L I R L A EDNN NW T F q L AGDKRTSD D SAP S S WS 160
Cdd:COG2982 69 G D VT L S NP DGFGGPPLASAE R L E LD LA L L P LLS GELEVDE I T L DG P VIN L E R D A DGRA NW D F - L LAAAAAAA D AEA S A WS 147
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490304022 161 FRLDNILFDR G TIAI DD KITRS D I T I lvdplgkplpf SEVTG T KDRH S AAK P gdyv F G LS LK GR YK GQP V T GN GKIGG M L 240
Cdd:COG2982 148 LDIGRLEITD G RLVY DD AASGA D L T L ----------- DDLNL T LSGP S LDG P ---- F R LS GS GR LN GQP L T LD GKIGG L L 212
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490304022 241 AL R sasa P F PL QG D FH SG NT R VAFS GTV sdpl NVG G I D LR L KFA G D SLRDL YD L T GV L LPE TPS FS TD GRL R AD ftqkn R 320
Cdd:COG2982 213 AL G ---- P Y PL KL D LR SG DL R LSLD GTV ---- DLA G L D GQ L ALS G P SLRDL LA L L GV T LPE PGP FS LS GRL T AD ----- G 279
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490304022 321 M R FNYQNFN G RI GDSD IH G S L TY T t G KP RP K L S GD ME S KQ L R L A DL G P LIGVDSGK G tkksaarqaddr PQP A GKV LP AD 400
Cdd:COG2982 280 D R LRLEDLK G TL GDSD LT G D L SV T - G GD RP A L T GD LA S DR L D L D DL L P AAPAAAAA G ------------ APA A ARG LP DA 346
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490304022 401 RFETDKWQVM DADVR FKGRRIEH GG t LP IS DL ST H VI L E DG D L R L Q P VRF GL AN G SIA GS VH L QGDKK P LQGEAN L QARR 480
Cdd:COG2982 347 PLDLSALRAL DADVR LSADSLKL GG - LP LG DL AA H LT L D DG R L D L D P LSA GL YG G TLS GS LT L DARGD P PRVALK L SLSG 425
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 490304022 481 LK L KA L M P NVEMMQKTL G EM NGD VQ L R G S GNSVAALL GNS NG NLK L LMN DG L IS RNLM E I L GL N V G 546
Cdd:COG2982 426 VD L GP L L P DLAGFDRLS G TL NGD LD L S G T GNSVAALL ASL NG SAS L SLG DG A IS GLNL E Q L LR N A G 491
PRK10833
PRK10833 putative assembly protein; Provisional
292-530
1.02e-03
putative assembly protein; Provisional
Pssm-ID: 236772 [Multi-domain]
Cd Length: 617
Bit Score: 42.20
E-value: 1.02e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490304022 292 Y D L T G VL LP e TPSF S TD G R L R A DF t Q KNRM R FNYQNF N GRIG DS DIH GS LTY T T G k PR P KLSG D ME S KQ L rla D L GP L I G 371
Cdd:PRK10833 225 Y Q L Q G AD LP - AQGI S GQ G S L Q A QW - Q ESPK R LSLNQL N LTAN DS QLS GS ASV T L G - EK P EYQL D LQ S DK L --- N L DN L L G 298
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490304022 372 VDSGKGTKKS A ARQADDRPQ P A gkvl P -- A D R FETDK ---- WQVMD AD VRFKGRRIEHG G t LPISDLSTHVILED G D L RL 445
Cdd:PRK10833 299 LQPLANDENG A QQGQSQPTL P R ---- P vi A S R IDSEP ayqg LRDFT AD LTLQADNVRYR G - MNFTQVALQATNQQ G L L TI 373
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490304022 446 QPVRFG L AN G SIAGSVH L QGDKKPLQGEANLQARRLK L KA L MPNVEMMQKTL G EMNGDVQLR G S G NSV AA LLGNSN G NLK 525
Cdd:PRK10833 374 TTLSGK L GG G DFSLPGT L DATGASPRITFQPRLKNVE L GP L LKAFNLPISLT G KLSLAGDFS G A G IDA AA FRHQWQ G QAH 453
....*
gi 490304022 526 LL M ND 530
Cdd:PRK10833 454 VS M DN 458
Name
Accession
Description
Interval
E-value
AsmA
pfam05170 AsmA family; The AsmA gene, whose product is involved in the assembly of outer membrane ...
1-580
2.29e-168
AsmA family; The AsmA gene, whose product is involved in the assembly of outer membrane proteins in Escherichia coli. AsmA mutations were isolated as extragenic suppressors of an OmpF assembly mutant. AsmA may have a role in LPS biogenesis.
Pssm-ID: 428346 [Multi-domain]
Cd Length: 607
Bit Score: 495.46
E-value: 2.29e-168
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490304022 1 M SRTR K T LV I I TGTI LLL I VL FFIVL A T FD W N RL KPT IN QKVSA EL NRP F AI R GD L G vvwerqpdergw RS WI PWP HVHA 80
Cdd:pfam05170 1 M KKAL K I LV A I LLGL LLL L VL LAALI A L FD P N NY KPT LQ QKVSA AT NRP L AI N GD I G ------------ RS LF PWP TLSL 68
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490304022 81 E DI V L GN P PA i PQVTMIH L PR V EAT L A PL A LL S K TVYLPW I K L EQPDVR L I RL AED N N NW TFQLAGDKRT --------- S 151
Cdd:pfam05170 69 S DI T L AS P QG - DATPLVS L EQ V KIS L S PL P LL R K QIEIDS I R L DGAELA L E RL KQG N W NW QELIQNQQNQ asnaptqqp Q 147
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490304022 152 DDSAPSS WS FRLDN I LFDR G TIA IDDK ITRS ----- DITIL V DP L GK P - LPF S EV T GT - K DRHSAAKP G DY V FGLS L K G R 224
Cdd:pfam05170 148 PTWPVAA WS LPIGR I QVSN G QVT IDDK ASQK ilkdi NLELQ V ST L YG P s FNW S KI T IS g K GDQDPQSF G SQ V NVTI L S G E 227
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490304022 225 YK G QPVT G NGKI GGML A L RSA S A P FPLQGDFHSG N TRVAFS GT VS D P LN VGGI DL R LK FA G --------------- DSL R 289
Cdd:pfam05170 228 IS G EALR G STST GGML L L QTL S S P IYHINSLKLL N AQLELD GT LW D N LN LSIE DL D LK AS G wksitvnlaltadel DSL A 307
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490304022 290 DLYD L T G VL LP E TP SFS T D G R L RAD F TQKN ---------- RMRFN Y QN F N G R -- I G D SDI HG S LTYTTGK PRPKL S G DME 357
Cdd:pfam05170 308 NQAE L P G AN LP D TP QNI T L G E L SLS F KTGR vqvsgslnsl TLNLD Y LS F D G K kw V G S SDI DL S NRLPQPQ PRPKL R G KLS 387
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490304022 358 S KQ L R L AD L G P LIGVDSG K GTKKSAARQADDR p QP A GKV LP ADR F ETDK WQ V MDADV RFKGRRIEHG G t LPISDL S T HVI 437
Cdd:pfam05170 388 S PE L D L DN L L P IKTAVAA K SRAPEWDASGLSA - DG A NLP LP VEP F LWGV WQ G MDADV SANIDKVTYS G - LPISDL K T KLR 465
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490304022 438 L E D G D L R L QPVRF GL AN G SIAGSVH L QGD KKP LQGEANLQ A RRLK LK A L M P NVEM M QK T L G EMNG D VQ L R GSGNSV AA L L 517
Cdd:pfam05170 466 S E G G V L Q L SRLKG GL YG G YLEAGAQ L DLS KKP ATYRLKIN A KNIP LK P L L P DLFK M FS T D G LLDI D AD L Q GSGNSV KM L I 545
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 490304022 518 G NS NG N LKL LMND G LI S rnlmeil G L NVGN Y L ------ IGQI FGD EEVRV NC AAA N IDVTN GV ARPQIF 580
Cdd:pfam05170 546 G SL NG Q LKL NLRN G AL S ------- G I NVGN I L vngiag LTSD FGD KSTPF NC LTL N LNLQR GV VTLNDT 607
AsmA
COG2982 Uncharacterized conserved protein AsmA involved in outer membrane biogenesis [Cell wall ...
1-546
3.54e-132
Uncharacterized conserved protein AsmA involved in outer membrane biogenesis [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442221 [Multi-domain]
Cd Length: 491
Bit Score: 398.64
E-value: 3.54e-132
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490304022 1 MSRTRKT L V I ITGTIL LL IVLFFIVLAT FDWNRL K P T I NQK VS AELN R PFA I R GDL GV vwerqpdergwr S WI PWP H V HA 80
Cdd:COG2982 1 KRLMKRL L I I LAILLV LL VAALVALPLL FDWNRL R P L I ERQ VS EATG R EVT I D GDL SL ------------ S LF PWP G V TL 68
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490304022 81 E D IV L G NP PAIPQVTMIHLP R V E AT LA P L A LLS KTVYLPW I K L EQ P DVR L I R L A EDNN NW T F q L AGDKRTSD D SAP S S WS 160
Cdd:COG2982 69 G D VT L S NP DGFGGPPLASAE R L E LD LA L L P LLS GELEVDE I T L DG P VIN L E R D A DGRA NW D F - L LAAAAAAA D AEA S A WS 147
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490304022 161 FRLDNILFDR G TIAI DD KITRS D I T I lvdplgkplpf SEVTG T KDRH S AAK P gdyv F G LS LK GR YK GQP V T GN GKIGG M L 240
Cdd:COG2982 148 LDIGRLEITD G RLVY DD AASGA D L T L ----------- DDLNL T LSGP S LDG P ---- F R LS GS GR LN GQP L T LD GKIGG L L 212
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490304022 241 AL R sasa P F PL QG D FH SG NT R VAFS GTV sdpl NVG G I D LR L KFA G D SLRDL YD L T GV L LPE TPS FS TD GRL R AD ftqkn R 320
Cdd:COG2982 213 AL G ---- P Y PL KL D LR SG DL R LSLD GTV ---- DLA G L D GQ L ALS G P SLRDL LA L L GV T LPE PGP FS LS GRL T AD ----- G 279
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490304022 321 M R FNYQNFN G RI GDSD IH G S L TY T t G KP RP K L S GD ME S KQ L R L A DL G P LIGVDSGK G tkksaarqaddr PQP A GKV LP AD 400
Cdd:COG2982 280 D R LRLEDLK G TL GDSD LT G D L SV T - G GD RP A L T GD LA S DR L D L D DL L P AAPAAAAA G ------------ APA A ARG LP DA 346
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490304022 401 RFETDKWQVM DADVR FKGRRIEH GG t LP IS DL ST H VI L E DG D L R L Q P VRF GL AN G SIA GS VH L QGDKK P LQGEAN L QARR 480
Cdd:COG2982 347 PLDLSALRAL DADVR LSADSLKL GG - LP LG DL AA H LT L D DG R L D L D P LSA GL YG G TLS GS LT L DARGD P PRVALK L SLSG 425
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 490304022 481 LK L KA L M P NVEMMQKTL G EM NGD VQ L R G S GNSVAALL GNS NG NLK L LMN DG L IS RNLM E I L GL N V G 546
Cdd:COG2982 426 VD L GP L L P DLAGFDRLS G TL NGD LD L S G T GNSVAALL ASL NG SAS L SLG DG A IS GLNL E Q L LR N A G 491
YhdR
COG3164 Uncharacterized conserved protein YhdP, contains DUF3971 and AsmA2 domains [Function unknown];
1-446
3.64e-12
Uncharacterized conserved protein YhdP, contains DUF3971 and AsmA2 domains [Function unknown];
Pssm-ID: 442397 [Multi-domain]
Cd Length: 1289
Bit Score: 69.96
E-value: 3.64e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490304022 1 MS RTRKT L VIITGT ILLL IVLFFI VL ATF ---------- DWNRLK P TINQKV S AE L NR P FA I r G D L GVV W erqpde R G WR 70
Cdd:COG3164 1 MS KPLRR L LRRLLR ILLL LLAVLL VL LAL llsllrlllp LLDDYR P QLEAWL S QA L GV P VT I - G S L SAS W ------ Q G LG 73
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490304022 71 swipw P HVHAE D IV L GN P PAI P QVT mih LPRVE AT L APLA - LL SKTVYLPWIK L EQPDVR L I R L A EDN nnwt FQL AG D kr 149
Cdd:COG3164 74 ----- P VLELR D VR L LD P DGR P ALR --- LPRVE LA L DLWR s LL HGRPRFRRLT L DGLQLD L R R D A DGR ---- WSV AG L -- 139
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490304022 150 TSDDSAPSSWSFR L DNI L FDR G TIAID D kitr S DITI L VDPL G K PL PF S E V ---- TGTKD RH -------- S AA KP G DYVF 217
Cdd:COG3164 140 PVSGGGDGDDLDA L LDW L LQQ G RFSLR D ---- S RLRW L DPSR G P PL TL S I V nlrl RNGGR RH rlegrasl P AA LG G PLDL 215
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490304022 218 GLS L K G RYK G QPVTGN G KI ---- GGMLALRSASAPF P LQGDFH SG NTRVAFSGTVS D p LNVGGIDLR L KFAGD SLR DLY D 293
Cdd:COG3164 216 RAD L R G PDP G DWRGWS G QL ylqa DDVDLAPWLPRDL P DNLGLQ SG RGSLRAWLDLR D - GRLTSATAD L ALSDL SLR LAE D 294
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490304022 294 L TGVL L P etpsf STD GRLR ADFTQ k NRMRFNYQNFNGRIGD --- SDIHG SL TYTTGKPRPK l SGDMESKQ L R LA D L G PL I 370
Cdd:COG3164 295 L PPLA L Q ----- RLS GRLR WQRQG - DGWQLDLPDLRLATDG qaw PLGDL SL RWQPAAGQGE - ELRLRADR L D LA A L A PL L 367
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490304022 371 GVDSGKG tkk S A A R QADDRP QP A G KV ---- L PADRFETDKWQV mda DV R FKGRRIEHG G T LP - I S D LS THVILEDGDL RL 445
Cdd:COG3164 368 PLLPLLP --- P A L R ELLAAL QP R G RL rdlr L DWPLEAPERYRL --- SA R LQDLSWQAW G G LP g V S G LS GTLSGDEQGG RL 441
.
gi 490304022 446 Q 446
Cdd:COG3164 442 T 442
AsmA_2
pfam13502 AsmA-like C-terminal region; This family is similar to the C-terminal of the AsmA protein of E. ...
429-607
6.33e-12
AsmA-like C-terminal region; This family is similar to the C-terminal of the AsmA protein of E. coli.
Pssm-ID: 463902 [Multi-domain]
Cd Length: 226
Bit Score: 65.85
E-value: 6.33e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490304022 429 ISDL S THVILED G D LRL QPVRFGLAN G SI AGS VHLQGDKKPLQGEAN L QARRLK L K AL MPNVEMMQKTL G EMNG D VQ L RG 508
Cdd:pfam13502 1 LGNV S GKLRPQG G G LRL DKLNLRSPG G KL AGS GEWRTGGGAPRTNLD L KLDGVD L G AL LKRLGLPEVLG G KGSL D GS L SW 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490304022 509 S G NSVAAL L GNSN G N L K L LMND G L I - S R N L MEILG L NVGN yligq I FG D e EVRVNCAAANIDVT NGV ARPQI F AF D TEN A 587
Cdd:pfam13502 81 Q G APLSPD L SSLS G D L D L DLGN G Q I l G R D L GLLKT L DFRD ----- L FG K - GLAFDSITGPFSIE NGV VHTDD F KL D GPA A 154
170 180
....*....|....*....|
gi 490304022 588 LINVT GT ASFAS E Q LD LTID 607
Cdd:pfam13502 155 KLTIK GT VDLDR E T LD YNVV 174
TamB
COG2911 Autotransporter translocation and assembly protein TamB [Intracellular trafficking, secretion, ...
219-623
8.79e-07
Autotransporter translocation and assembly protein TamB [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 442155 [Multi-domain]
Cd Length: 766
Bit Score: 52.35
E-value: 8.79e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490304022 219 L S L K G RYKGQPVT G NGKI - GGM LA LRS A SA P f P L Q G DFHS --- GNTRVAFS GT VSDP lnvggi D L R L KFA G DSLRDLYD L 294
Cdd:COG2911 100 L T L S G NLSAASLD G DLDL d APD LA DLA A LL P - G L A G SLSG dgl DSLSLDAD GT LAQH ------ R L D L DAK G EPASLSLA L 172
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490304022 295 T G V L LPETPSFSTDGRL -- RADFTQKNRMRFN Y QNFNGRI G DSDIH G SLTYT - T G KPRPK L SGDMES K Q L R LA D L G P LIG 371
Cdd:COG2911 173 S G G L DRDDGGTLSRLDF ln TGRWGLAAPATLS Y DDGRVTL G PLCLA G GGSLC l S G TLGGT L DLQLRL K N L P LA L L N P FLP 252
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490304022 372 V D S G - K GT KKSA A RQADDRPQ P A G KV lpad RFE tdkwqv MDA D VRFKGRRI eh G GT L PIS DL STHVI L ED G D L R L Q p VRF 450
Cdd:COG2911 253 D D L G l S GT LNGD A DLSGGLAN P Q G DA ---- SLS ------ LSG D LTLNDGLG -- G LP L GLG DL TLNAR L AN G R L T L D - LTL 319
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490304022 451 GLANG --- S IA GSV H L QG --- DKK PL Q G EAN L QARR L K - L KA L M P nv EMMQKTL G EM NGD VQ L R G S gns V AA L lg NS NG N 523
Cdd:COG2911 320 DGGGL gtl S LS GSV P L AD glp PSA PL D G NLR L DNLD L A l L NP L L P -- GVLERLS G QL NGD LR L S G T --- L AA P -- QL NG Q 392
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490304022 524 L K L lm N DG lisrnlmeilgl NVGNYLI G QIFG D EEV R VNCAAANIDVTN gvarpqi FAF D TENALINVT GT ASFASEQLD 603
Cdd:COG2911 393 L T L -- D DG ------------ RLKLPAL G VRLT D INL R LRFDGDRLTLDG ------- LTA D SGGGTLTLS GT VDLDGLSWP 451
410 420
....*....|....*....|
gi 490304022 604 LTIDPESKGF RV it L RS P L Y 623
Cdd:COG2911 452 ADLTLKGDNL RV -- L NP P D Y 469
TamB
COG2911 Autotransporter translocation and assembly protein TamB [Intracellular trafficking, secretion, ...
272-632
4.51e-04
Autotransporter translocation and assembly protein TamB [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 442155 [Multi-domain]
Cd Length: 766
Bit Score: 43.49
E-value: 4.51e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490304022 272 L NVGGID L RLKFA GD S LR - D LY DL tgvllp ET P SFSTD G R L RADFTQKNRMRFNYQ ----- NFNG R I G DSDIHG S LTYTT 345
Cdd:COG2911 35 L CIDELA L SASLD GD R LR l D NL DL ------ DA P EGALS G L L DLVQATLDAEGLDLA ssald DLDL R S G GNRLTL S GNLSA 108
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490304022 346 GKPRPK L SG D MESKQLRL A D L GP L I G VD SG K G TKKSAARQADDRP Q pagkvlpa D R FET D - K WQVMDADVRFK G R -- R IE 422
Cdd:COG2911 109 ASLDGD L DL D APDLADLA A L L PG L A G SL SG D G LDSLSLDADGTLA Q -------- H R LDL D a K GEPASLSLALS G G ld R DD 180
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490304022 423 H G GTLPISD L S T --------- HVILE DG DLR L Q P VR fg LA N G sia GS VH L Q G DKKP l QGEAN L QARR L K L KA L M P NVEMM 493
Cdd:COG2911 181 G G TLSRLDF L N T grwglaapa TLSYD DG RVT L G P LC -- LA G G --- GS LC L S G TLGG - TLDLQ L RLKN L P L AL L N P FLPDD 254
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490304022 494 QKTL G EM NGD VQ L R G S gnsvaal L G N SN G NLK L LMNDG L ISRNLMEI L G L NV G N yligqifgdeevrvnc AAA N IDVT NG 573
Cdd:COG2911 255 LGLS G TL NGD AD L S G G ------- L A N PQ G DAS L SLSGD L TLNDGLGG L P L GL G D ---------------- LTL N ARLA NG 311
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 490304022 574 VARPQIFAFDTENALINVT G TASF A ----- S EQ LD LTIDPESKGFRVITLRS P ------------- L YVR GT FKS PQ 632
Cdd:COG2911 312 RLTLDLTLDGGGLGTLSLS G SVPL A dglpp S AP LD GNLRLDNLDLALLNPLL P gvlerlsgqlngd L RLS GT LAA PQ 388
PRK10833
PRK10833 putative assembly protein; Provisional
292-530
1.02e-03
putative assembly protein; Provisional
Pssm-ID: 236772 [Multi-domain]
Cd Length: 617
Bit Score: 42.20
E-value: 1.02e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490304022 292 Y D L T G VL LP e TPSF S TD G R L R A DF t Q KNRM R FNYQNF N GRIG DS DIH GS LTY T T G k PR P KLSG D ME S KQ L rla D L GP L I G 371
Cdd:PRK10833 225 Y Q L Q G AD LP - AQGI S GQ G S L Q A QW - Q ESPK R LSLNQL N LTAN DS QLS GS ASV T L G - EK P EYQL D LQ S DK L --- N L DN L L G 298
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490304022 372 VDSGKGTKKS A ARQADDRPQ P A gkvl P -- A D R FETDK ---- WQVMD AD VRFKGRRIEHG G t LPISDLSTHVILED G D L RL 445
Cdd:PRK10833 299 LQPLANDENG A QQGQSQPTL P R ---- P vi A S R IDSEP ayqg LRDFT AD LTLQADNVRYR G - MNFTQVALQATNQQ G L L TI 373
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490304022 446 QPVRFG L AN G SIAGSVH L QGDKKPLQGEANLQARRLK L KA L MPNVEMMQKTL G EMNGDVQLR G S G NSV AA LLGNSN G NLK 525
Cdd:PRK10833 374 TTLSGK L GG G DFSLPGT L DATGASPRITFQPRLKNVE L GP L LKAFNLPISLT G KLSLAGDFS G A G IDA AA FRHQWQ G QAH 453
....*
gi 490304022 526 LL M ND 530
Cdd:PRK10833 454 VS M DN 458
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.21
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
