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Conserved domains on  [gi|490305763|ref|WP_004200898|]
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MULTISPECIES: amino acid permease [pseudomallei group]

Protein Classification

APC family permease( domain architecture ID 1903533)

APC (amino acid/polyamine/organocation) family permease is involved in the uptake of a specific amino acid and/or polyamine substrate with the concomitant import of a proton

Gene Ontology:  GO:0055085|GO:0022857
TCDB:  2.A.3

Graphical summary

 Zoom to residue level

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List of domain hits

Name Accession Description Interval E-value
AA_permease_2 super family cl45918
Amino acid permease;
1-450 0e+00

Amino acid permease;


The actual alignment was detected with superfamily member PRK10238:

Pssm-ID: 459263 [Multi-domain]  Cd Length: 456  Bit Score: 648.94  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763   1 MATDQDNDGLKRGLKNRHIQLIALGGAIGTGLFLGIAQTIRMAGPSVLLGYALAGVVAFFIMRQLGEMVVDEPVAGSFSY 80
Cdd:PRK10238   1 MEGQQHGEQLKRGLKNRHIQLIALGGAIGTGLFLGSASVIQSAGPGIILGYAIAGFIAFLIMRQLGEMVVEEPVAGSFSH 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763  81 FASKYCGHFTGFLSGWNYWVLYVLVSMAELSAVGIYVQYWWPGVPTWISALVFFVVINAVNLASVKSYGETEFWFSIVKV 160
Cdd:PRK10238  81 FAYKYWGSFAGFASGWNYWVLYVLVAMAELTAVGKYIQFWYPEIPTWVSAAVFFVVINAINLTNVKVFGEMEFWFAIIKV 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763 161 AAIIGMIGFGGYLLLSGHAGPDAGVANLWRHGGFFPNGIGGLAMAMAVIMFSFGGLELVGITAAEADDPSHSIPRATNQV 240
Cdd:PRK10238 161 IAVVAMIIFGGWLLFSGNGGPQATVSNLWDQGGFLPHGFTGLVMMMAIIMFSFGGLELVGITAAEADNPEQSIPKATNQV 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763 241 IYRILIFYIGALGVLLSLYPWQKVVTGGSPFVLIFHALSSDIAANVLNLVVLTAALSVYNSCVYCNSRMLYGLAQQGNAP 320
Cdd:PRK10238 241 IYRILIFYIGSLAVLLSLMPWTRVTADTSPFVLIFHELGDTFVANALNIVVLTAALSVYNSCVYCNSRMLFGLAQQGNAP 320
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763 321 QALARVNRRGIPIAALGVSAFATALCVVINYFMPGKAFELLMGLVVSAIIINWAMISVIHLRFRQAKRAAGETTRFRSLG 400
Cdd:PRK10238 321 KALASVDKRGVPVNTILVSALVTALCVLINYLAPESAFGLLMALVVSALVINWAMISLAHMKFRRAKQEQGVVTRFPALL 400
                        410       420       430       440       450
                 ....*....|....*....|....*....|....*....|....*....|
gi 490305763 401 YPLTNYFCLAFMAAILVVMFRTPELRLSVYLIPVWLVVLALGYRFRQRGA 450
Cdd:PRK10238 401 YPLGNWICLLFMAAVLVIMLMTPGMAISVYLIPVWLIVLGIGYLFKEKTA 450
 
Name Accession Description Interval E-value
PRK10238 PRK10238
aromatic amino acid transporter AroP;
1-450 0e+00

aromatic amino acid transporter AroP;


Pssm-ID: 182324 [Multi-domain]  Cd Length: 456  Bit Score: 648.94  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763   1 MATDQDNDGLKRGLKNRHIQLIALGGAIGTGLFLGIAQTIRMAGPSVLLGYALAGVVAFFIMRQLGEMVVDEPVAGSFSY 80
Cdd:PRK10238   1 MEGQQHGEQLKRGLKNRHIQLIALGGAIGTGLFLGSASVIQSAGPGIILGYAIAGFIAFLIMRQLGEMVVEEPVAGSFSH 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763  81 FASKYCGHFTGFLSGWNYWVLYVLVSMAELSAVGIYVQYWWPGVPTWISALVFFVVINAVNLASVKSYGETEFWFSIVKV 160
Cdd:PRK10238  81 FAYKYWGSFAGFASGWNYWVLYVLVAMAELTAVGKYIQFWYPEIPTWVSAAVFFVVINAINLTNVKVFGEMEFWFAIIKV 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763 161 AAIIGMIGFGGYLLLSGHAGPDAGVANLWRHGGFFPNGIGGLAMAMAVIMFSFGGLELVGITAAEADDPSHSIPRATNQV 240
Cdd:PRK10238 161 IAVVAMIIFGGWLLFSGNGGPQATVSNLWDQGGFLPHGFTGLVMMMAIIMFSFGGLELVGITAAEADNPEQSIPKATNQV 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763 241 IYRILIFYIGALGVLLSLYPWQKVVTGGSPFVLIFHALSSDIAANVLNLVVLTAALSVYNSCVYCNSRMLYGLAQQGNAP 320
Cdd:PRK10238 241 IYRILIFYIGSLAVLLSLMPWTRVTADTSPFVLIFHELGDTFVANALNIVVLTAALSVYNSCVYCNSRMLFGLAQQGNAP 320
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763 321 QALARVNRRGIPIAALGVSAFATALCVVINYFMPGKAFELLMGLVVSAIIINWAMISVIHLRFRQAKRAAGETTRFRSLG 400
Cdd:PRK10238 321 KALASVDKRGVPVNTILVSALVTALCVLINYLAPESAFGLLMALVVSALVINWAMISLAHMKFRRAKQEQGVVTRFPALL 400
                        410       420       430       440       450
                 ....*....|....*....|....*....|....*....|....*....|
gi 490305763 401 YPLTNYFCLAFMAAILVVMFRTPELRLSVYLIPVWLVVLALGYRFRQRGA 450
Cdd:PRK10238 401 YPLGNWICLLFMAAVLVIMLMTPGMAISVYLIPVWLIVLGIGYLFKEKTA 450
AnsP COG1113
L-asparagine transporter or related permease [Amino acid transport and metabolism];
2-448 0e+00

L-asparagine transporter or related permease [Amino acid transport and metabolism];


Pssm-ID: 440730 [Multi-domain]  Cd Length: 458  Bit Score: 634.47  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763   2 ATDQDNDGLKRGLKNRHIQLIALGGAIGTGLFLGIAQTIRMAGPSVLLGYALAGVVAFFIMRQLGEMVVDEPVAGSFSYF 81
Cdd:COG1113    5 AAASEEEGLKRGLKNRHIQMIALGGAIGTGLFLGSGKAIALAGPAVLLSYLIAGLIVFLVMRALGEMAVANPVSGSFSDY 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763  82 ASKYCGHFTGFLSGWNYWVLYVLVSMAELSAVGIYVQYWWPGVPTWISALVFFVVINAVNLASVKSYGETEFWFSIVKVA 161
Cdd:COG1113   85 AREYLGPWAGFVTGWLYWFFWVLVGMAEATAVGIYLQFWFPDVPQWVWALVFLVLLTAINLLSVKLFGEFEFWFALIKVV 164
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763 162 AIIGMIGFGGYLLLSGH---AGPDAGVANLWRHGGFFPNGIGGLAMAMAVIMFSFGGLELVGITAAEADDPSHSIPRATN 238
Cdd:COG1113  165 AIVAFIVVGLLLIFFGFglpGGPPAGLSNLWDHGGFFPNGIGGVLAALQIVVFAFGGIELVGIAAAEAKDPEKTIPKAIN 244
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763 239 QVIYRILIFYIGALGVLLSLYPWQKVVTGGSPFVLIFHALSSDIAANVLNLVVLTAALSVYNSCVYCNSRMLYGLAQQGN 318
Cdd:COG1113  245 SVIWRILLFYVGSLFVILALVPWNQIGAGGSPFVTVFSLLGIPAAAGIMNFVVLTAALSSLNSGLYSTSRMLYSLAERGD 324
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763 319 APQALARVNRRGIPIAALGVSAFATALCVVINYFMPGKAFELLMGLVVSAIIINWAMISVIHLRFRQAKRAAG-ETTRFR 397
Cdd:COG1113  325 APKFFGKLSKRGVPVRAILLSAVVLLIGVVLNYLLPEKAFTFLLSISGFGALFVWLMILVSQLKFRRRLPREGaAALKFK 404
                        410       420       430       440       450
                 ....*....|....*....|....*....|....*....|....*....|.
gi 490305763 398 SLGYPLTNYFCLAFMAAILVVMFRTPELRLSVYLIPVWLVVLALGYRFRQR 448
Cdd:COG1113  405 MPGFPYTSYLTLAFLAAVLVLMAFDPDTRIALIVGPVWLALLVVGYFLVRR 455
AA_permease pfam00324
Amino acid permease;
18-448 1.03e-103

Amino acid permease;


Pssm-ID: 366028 [Multi-domain]  Cd Length: 467  Bit Score: 316.95  E-value: 1.03e-103
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763   18 HIQLIALGGAIGTGLFLGIAQTIRMAGP-SVLLGYALAGVVAFFIMRQLGEMVVDEPVAGSFSYFASKYCGHFTGFLSGW 96
Cdd:pfam00324   1 HVQMIALGGVIGTGLFVGSGSVLGQAGPaGALLGYLISGVVIFLVMLSLGEISTNGPVSGGFYTYASRFLGPSLGFATGW 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763   97 NYWVLYVLVSMAELSAVGIYVQYWWPGV---PTWISALVFFVVINAVNLASVKSYGETEFWFSIVKVAAIIGMIGFGGYL 173
Cdd:pfam00324  81 NYWLSWITVLALELTAASILIQFWELVPdipYLWVWGAVFLVLLTIINLVGVKWYGEAEFWFALIKIIAIIGFIIVGIIL 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763  174 LLSGHAGPDAGVANLWRHGG--FFPNGI-GGLAMAMAVIMFSFGGLELVGITAAEADDPSHSIPRATNQVIYRILIFYIG 250
Cdd:pfam00324 161 LSGGNPNDGAIFRYLGDNGGknNFPPGFgKGFISVFVIAFFAFTGIELVGIAAGEVKNPEKSIPKAILQVIWRITIFYIL 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763  251 ALGVLLSLYPW------QKVVTGGSPFVLIFHALSSDIAANVLNLVVLTAALSVYNSCVYCNSRMLYGLAQQGNAPQALA 324
Cdd:pfam00324 241 SLLAIGLLVPWndpgllNDSASAASPFVIFFKFLGISGLAPLINAVILTAALSAANSSLYSGSRMLYSLARDGLAPKFLK 320
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763  325 RVNRRGIPIAALGVSAFATALCVVINYFMPGKAFELLMGLVVSAIIINWAMISVIHLRFRQAKRAAG---ETTRFRSLGY 401
Cdd:pfam00324 321 KVDKRGVPLRAILVSMVISLLALLLASLNPAIVFNFLLAISGLSGLIVWGLISLSHLRFRKAFKYQGrsiDELPFKAPLG 400
                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763  402 PLTNYFCLAFMAAILVVMFRTPELR-------------LSVYLIPVWLVVLALGYRFRQR 448
Cdd:pfam00324 401 PLGVILGLAAIIIILIIQFLYAFLPvpggpknwgagsfAAAYLIVLLFLIILIGVKLHVK 460
2A0310 TIGR00913
amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]
11-420 6.07e-96

amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273334  Cd Length: 478  Bit Score: 297.27  E-value: 6.07e-96
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763   11 KRGLKNRHIQLIALGGAIGTGLFLGIAQTIRMAGP-SVLLGYALAGVVAFFIMRQLGEMVVDEPV-AGSFSYFASKYCGH 88
Cdd:TIGR00913   1 KKSLKQRHIQMIALGGTIGTGLLVGSGTALATGGPaGLLIGYAIMGSIIYCVMQSLGEMATFYPVvSGSFATYASRFVDP 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763   89 FTGFLSGWNYWVLYVLVSMAELSAVGIYVQYWWPGVPTWISALVFFVVINAVNLASVKSYGETEFWFSIVKVAAIIGMIG 168
Cdd:TIGR00913  81 AFGFAVGWNYWLQWLIVLPLELVTASMTIQYWTDKVNPAVWIAIFYVFIVIINLFGVKGYGEAEFWFSSIKILAIIGFII 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763  169 FgGYLLLSGHAGPDAGV-ANLWRHGGFFPNGIG-----GLAMAMAVIMFSFGGLELVGITAAEADDPSHSIPRATNQVIY 242
Cdd:TIGR00913 161 L-SIILNCGGGPNHGYIgFRYWHDPGAFAGGTIggrfkGVCSVFVTAAFSFGGTELVALTAGEAANPRKSIPRAAKRTFW 239
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763  243 RILIFYIGALGVLLSLYPWQ---------KVVTGGSPFVLIFHALSSDIAANVLNLVVLTAALSVYNSCVYCNSRMLYGL 313
Cdd:TIGR00913 240 RILVFYILTLFLIGFLVPYNdprllssssSSDSAASPFVIAIQNHGIKVLPHIFNAVILISVLSAANSSLYASSRTLYAL 319
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763  314 AQQGNAPQALARVNRRGIPIAALGVSAFATALCVVINYFMPGKAFELLMGLVVSAIIINWAMISVIHLRFRQAKRAAGET 393
Cdd:TIGR00913 320 AHQGLAPKIFAYVDRRGVPYVAVIVSSLFGLLAFLAVSKKEAEVFTWLLNISGLSGFFTWMCICLSHIRFRKAMKAQGRS 399
                         410       420       430
                  ....*....|....*....|....*....|
gi 490305763  394 TR---FRSLGYPLTNYFCLAFMAAILVVMF 420
Cdd:TIGR00913 400 LDelpYKSQTGPYGSYYALFFNILILIAQG 429
 
Name Accession Description Interval E-value
PRK10238 PRK10238
aromatic amino acid transporter AroP;
1-450 0e+00

aromatic amino acid transporter AroP;


Pssm-ID: 182324 [Multi-domain]  Cd Length: 456  Bit Score: 648.94  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763   1 MATDQDNDGLKRGLKNRHIQLIALGGAIGTGLFLGIAQTIRMAGPSVLLGYALAGVVAFFIMRQLGEMVVDEPVAGSFSY 80
Cdd:PRK10238   1 MEGQQHGEQLKRGLKNRHIQLIALGGAIGTGLFLGSASVIQSAGPGIILGYAIAGFIAFLIMRQLGEMVVEEPVAGSFSH 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763  81 FASKYCGHFTGFLSGWNYWVLYVLVSMAELSAVGIYVQYWWPGVPTWISALVFFVVINAVNLASVKSYGETEFWFSIVKV 160
Cdd:PRK10238  81 FAYKYWGSFAGFASGWNYWVLYVLVAMAELTAVGKYIQFWYPEIPTWVSAAVFFVVINAINLTNVKVFGEMEFWFAIIKV 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763 161 AAIIGMIGFGGYLLLSGHAGPDAGVANLWRHGGFFPNGIGGLAMAMAVIMFSFGGLELVGITAAEADDPSHSIPRATNQV 240
Cdd:PRK10238 161 IAVVAMIIFGGWLLFSGNGGPQATVSNLWDQGGFLPHGFTGLVMMMAIIMFSFGGLELVGITAAEADNPEQSIPKATNQV 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763 241 IYRILIFYIGALGVLLSLYPWQKVVTGGSPFVLIFHALSSDIAANVLNLVVLTAALSVYNSCVYCNSRMLYGLAQQGNAP 320
Cdd:PRK10238 241 IYRILIFYIGSLAVLLSLMPWTRVTADTSPFVLIFHELGDTFVANALNIVVLTAALSVYNSCVYCNSRMLFGLAQQGNAP 320
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763 321 QALARVNRRGIPIAALGVSAFATALCVVINYFMPGKAFELLMGLVVSAIIINWAMISVIHLRFRQAKRAAGETTRFRSLG 400
Cdd:PRK10238 321 KALASVDKRGVPVNTILVSALVTALCVLINYLAPESAFGLLMALVVSALVINWAMISLAHMKFRRAKQEQGVVTRFPALL 400
                        410       420       430       440       450
                 ....*....|....*....|....*....|....*....|....*....|
gi 490305763 401 YPLTNYFCLAFMAAILVVMFRTPELRLSVYLIPVWLVVLALGYRFRQRGA 450
Cdd:PRK10238 401 YPLGNWICLLFMAAVLVIMLMTPGMAISVYLIPVWLIVLGIGYLFKEKTA 450
AnsP COG1113
L-asparagine transporter or related permease [Amino acid transport and metabolism];
2-448 0e+00

L-asparagine transporter or related permease [Amino acid transport and metabolism];


Pssm-ID: 440730 [Multi-domain]  Cd Length: 458  Bit Score: 634.47  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763   2 ATDQDNDGLKRGLKNRHIQLIALGGAIGTGLFLGIAQTIRMAGPSVLLGYALAGVVAFFIMRQLGEMVVDEPVAGSFSYF 81
Cdd:COG1113    5 AAASEEEGLKRGLKNRHIQMIALGGAIGTGLFLGSGKAIALAGPAVLLSYLIAGLIVFLVMRALGEMAVANPVSGSFSDY 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763  82 ASKYCGHFTGFLSGWNYWVLYVLVSMAELSAVGIYVQYWWPGVPTWISALVFFVVINAVNLASVKSYGETEFWFSIVKVA 161
Cdd:COG1113   85 AREYLGPWAGFVTGWLYWFFWVLVGMAEATAVGIYLQFWFPDVPQWVWALVFLVLLTAINLLSVKLFGEFEFWFALIKVV 164
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763 162 AIIGMIGFGGYLLLSGH---AGPDAGVANLWRHGGFFPNGIGGLAMAMAVIMFSFGGLELVGITAAEADDPSHSIPRATN 238
Cdd:COG1113  165 AIVAFIVVGLLLIFFGFglpGGPPAGLSNLWDHGGFFPNGIGGVLAALQIVVFAFGGIELVGIAAAEAKDPEKTIPKAIN 244
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763 239 QVIYRILIFYIGALGVLLSLYPWQKVVTGGSPFVLIFHALSSDIAANVLNLVVLTAALSVYNSCVYCNSRMLYGLAQQGN 318
Cdd:COG1113  245 SVIWRILLFYVGSLFVILALVPWNQIGAGGSPFVTVFSLLGIPAAAGIMNFVVLTAALSSLNSGLYSTSRMLYSLAERGD 324
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763 319 APQALARVNRRGIPIAALGVSAFATALCVVINYFMPGKAFELLMGLVVSAIIINWAMISVIHLRFRQAKRAAG-ETTRFR 397
Cdd:COG1113  325 APKFFGKLSKRGVPVRAILLSAVVLLIGVVLNYLLPEKAFTFLLSISGFGALFVWLMILVSQLKFRRRLPREGaAALKFK 404
                        410       420       430       440       450
                 ....*....|....*....|....*....|....*....|....*....|.
gi 490305763 398 SLGYPLTNYFCLAFMAAILVVMFRTPELRLSVYLIPVWLVVLALGYRFRQR 448
Cdd:COG1113  405 MPGFPYTSYLTLAFLAAVLVLMAFDPDTRIALIVGPVWLALLVVGYFLVRR 455
PRK10249 PRK10249
phenylalanine transporter; Provisional
10-448 0e+00

phenylalanine transporter; Provisional


Pssm-ID: 236667  Cd Length: 458  Bit Score: 568.08  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763  10 LKRGLKNRHIQLIALGGAIGTGLFLGIAQTIRMAGPSVLLGYALAGVVAFFIMRQLGEMVVDEPVAGSFSYFASKYCGHF 89
Cdd:PRK10249  19 LHRGLHNRHIQLIALGGAIGTGLFLGIGPAIQMAGPAVLLGYGVAGIIAFLIMRQLGEMVVEEPVSGSFAHFAYKYWGPF 98
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763  90 TGFLSGWNYWVLYVLVSMAELSAVGIYVQYWWPGVPTWISALVFFVVINAVNLASVKSYGETEFWFSIVKVAAIIGMIGF 169
Cdd:PRK10249  99 AGFLSGWNYWVMFVLVGMAELTAAGIYMQYWFPDVPTWIWAAAFFIIINAVNLVNVRLYGETEFWFALIKVLAIIGMIGF 178
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763 170 GGYLLLSGHAGPDAGVANLWRHGGFFPNGIGGLAMAMAVIMFSFGGLELVGITAAEADDPSHSIPRATNQVIYRILIFYI 249
Cdd:PRK10249 179 GLWLLFSGHGGEKASIDNLWRYGGFFATGWNGLILSLAVIMFSFGGLELIGITAAEARDPEKSIPKAVNQVVYRILLFYI 258
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763 250 GALGVLLSLYPWQKVVTGGSPFVLIFHALSSDIAANVLNLVVLTAALSVYNSCVYCNSRMLYGLAQQGNAPQALARVNRR 329
Cdd:PRK10249 259 GSLVVLLALYPWVEVKSNSSPFVMIFHNLDSNVVASALNFVILVASLSVYNSGVYSNSRMLFGLSVQGNAPKFLTRVSRR 338
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763 330 GIPIAALGVSAFATALCVVINYFMPGKAFELLMGLVVSAIIINWAMISVIHLRFRQAKRAAGETTRFRSLGYPLTNYFCL 409
Cdd:PRK10249 339 GVPINSLMLSGAITSLVVLINYLLPQKAFGLLMALVVATLLLNWIMICLAHLRFRAAMRRQGRETQFKALLYPFGNYLCI 418
                        410       420       430
                 ....*....|....*....|....*....|....*....
gi 490305763 410 AFMAAILVVMFRTPELRLSVYLIPVWLVVLALGYRFRQR 448
Cdd:PRK10249 419 AFLGMILLLMCTMDDMRLSAILLPVWIVFLFVAFKTLRR 457
LysP COG0833
Amino acid permease [Amino acid transport and metabolism];
1-448 1.13e-146

Amino acid permease [Amino acid transport and metabolism];


Pssm-ID: 440595 [Multi-domain]  Cd Length: 467  Bit Score: 426.51  E-value: 1.13e-146
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763   1 MATDQDNDGLKRGLKNRHIQLIALGGAIGTGLFLGIAQTIRMAGP-SVLLGYALAGVVAFFIMRQLGEMVVDEPVAGSFS 79
Cdd:COG0833    1 SSGSEKQNKLKRGLKSRHLSMIALGGVIGTGLFLASGYTISQAGPgGALLAYLLGGLMVYFLMTSLGELAVAMPVSGSFQ 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763  80 YFASKYCGHFTGFLSGWNYWVLYVLVSMAELSAVGIYVQYWWPGVPTWISALVFFVVINAVNLASVKSYGETEFWFSIVK 159
Cdd:COG0833   81 TYATRFIDPAFGFAVGWNYWLNWAITVAAELTAAGIIMQYWFPDVPVWIWSLLFLALIFLLNALSVKAFGESEFWFSLIK 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763 160 VAAIIGMIGFGGYLLLSGHAGPDAGVANLWRHGGFFPNGIGGLAMAMAVIMFSFGGLELVGITAAEADDPSHSIPRATNQ 239
Cdd:COG0833  161 VITVIAFIIVGLLMIFGIIGGHAPGFSNFTTGDGPFPGGFLAILGVMMIVGFSFQGTELIGIAAGESENPEKTIPKAIRQ 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763 240 VIYRILIFYIGALGVLLSLYPWQKVVTGGSPFVLIFHALSSDIAANVLNLVVLTAALSVYNSCVYCNSRMLYGLAQQGNA 319
Cdd:COG0833  241 VFWRILLFYILAIFVIAALIPYTDAGVAESPFTLVFERAGIPYAADIMNAVILTAVLSAGNSGLYASTRMLWSLAKEGMA 320
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763 320 PQALARVNRRGIPIAALGVSAFATALCVVINYFMPGKAFELLMGLVVSAIIINWAMISVIHLRFRQAKRAAGETT---RF 396
Cdd:COG0833  321 PKIFAKLNKRGVPLNALLATMAVGLLALLSSFFGAGTVYLWLLSISGLTGFIAWLGIAISHYRFRRAYVAQGGDLedlKY 400
                        410       420       430       440       450
                 ....*....|....*....|....*....|....*....|....*....|..
gi 490305763 397 RSLGYPLTNYFCLAFMAAILVVMFRTPELRLSVYLIPVWLVVLALGYRFRQR 448
Cdd:COG0833  401 KAPLFPFGPIFAFILCLIVIIGQAFDPEQRIALYIGIPFFLACYLGYKLKKK 452
proY PRK10580
putative proline-specific permease; Provisional
5-451 2.73e-127

putative proline-specific permease; Provisional


Pssm-ID: 182566 [Multi-domain]  Cd Length: 457  Bit Score: 376.85  E-value: 2.73e-127
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763   5 QDNDGLKRGLKNRHIQLIALGGAIGTGLFLGIAQTIRMAGPSVLLGYALAGVVAFFIMRQLGEMVVDEPVAGSFSYFASK 84
Cdd:PRK10580   2 ESKNKLKRGLSTRHIRFMALGSAIGTGLFYGSADAIKMAGPSVLLAYIIGGVAAYIIMRALGEMSVHNPAASSFSRYAQE 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763  85 YCGHFTGFLSGWNYWVLYVLVSMAELSAVGIYVQYWWPGVPTWISALVFFVVINAVNLASVKSYGETEFWFSIVKVAAII 164
Cdd:PRK10580  82 NLGPLAGYITGWTYCFEILIVAIADVTAFGIYMGVWFPTVPHWIWVLSVVLIICAVNLMSVKVFGELEFWFSFFKVATII 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763 165 GMI--GFGGYLLLSGHAGPDAGVANLWRHGGFFPNGIGGLAMAMAVIMFSFGGLELVGITAAEADDPSHSIPRATNQVIY 242
Cdd:PRK10580 162 IMIvaGIGIIIWGIGNGGQPTGIHNLWSNGGFFSNGWLGMVMSLQMVMFAYGGIEIIGITAGEAKDPEKSIPRAINSVPM 241
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763 243 RILIFYIGALGVLLSLYPWQKVVTGGSPFVLIFHALSSDIAANVLNLVVLTAALSVYNSCVYCNSRMLYGLAQQGNAPQA 322
Cdd:PRK10580 242 RILVFYVGTLFVIMSIYPWNQVGTNGSPFVLTFQHMGITFAASILNFVVLTASLSAINSDVFGVGRMLHGMAEQGSAPKI 321
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763 323 LARVNRRGIPIAALGVSAFATALCVVINYFMPGKAFELLMGLVVSAIIINWAMISVIHLRFRQA-KRAAGETTRFRSLGY 401
Cdd:PRK10580 322 FSKTSRRGIPWVTVLVMTTALLFAVYLNYIMPENVFLVIASLATFATVWVWIMILLSQIAFRRRlPPEEVKALKFKVPGG 401
                        410       420       430       440       450
                 ....*....|....*....|....*....|....*....|....*....|
gi 490305763 402 PLTNYFCLAFMAAILVVMFRTPELRLSVYLIPVWLVVLALGYRFRQRGAG 451
Cdd:PRK10580 402 VATTIGGLIFLVFIIGLIGYHPDTRISLYVGFAWIVLLLIGWMFKRRHDR 451
PRK11049 PRK11049
D-alanine/D-serine/glycine permease; Provisional
1-448 2.82e-122

D-alanine/D-serine/glycine permease; Provisional


Pssm-ID: 236830  Cd Length: 469  Bit Score: 364.44  E-value: 2.82e-122
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763   1 MATDQDNDGLKRGLKNRHIQLIALGGAIGTGLFLGIAQTIRMAGPSVLLGYALAGVVAFFIMRQLGEMVVDEPVAGSFSY 80
Cdd:PRK11049   9 DDQAPAEQSLRRNLTNRHIQLIAIGGAIGTGLFMGSGKTISLAGPSIIFVYMIIGFMLFFVMRAMGELLLSNLEYKSFSD 88
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763  81 FASKYCGHFTGFLSGWNYWVLYVLVSMAELSAVGIYVQYWWPGVPTWISALVFFVVINAVNLASVKSYGETEFWFSIVKV 160
Cdd:PRK11049  89 FASDLLGPWAGYFTGWTYWFCWVVTGIADVVAITAYAQFWFPDLSDWVASLAVVLLLLSLNLATVKMFGEMEFWFAMIKI 168
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763 161 AAIIGMIGFGGYLLLSGH---AGPDAGVANLWRHGGFFPNGIGGLAMAMAVIMFSFGGLELVGITAAEADDPSHSIPRAT 237
Cdd:PRK11049 169 VAIVALIVVGLVMVAMHFqspTGVEASFAHLWNDGGMFPKGLSGFFAGFQIAVFAFVGIELVGTTAAETKDPEKSLPRAI 248
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763 238 NQVIYRILIFYIGALGVLLSLYPWQKVVTGGSPFVLIFHALSSDIAANVLNLVVLTAALSVYNSCVYCNSRMLYGLAQQG 317
Cdd:PRK11049 249 NSIPIRIIMFYVFALIVIMSVTPWSSVVPDKSPFVELFVLVGLPAAASVINFVVLTSAASSANSGVFSTSRMLFGLAQEG 328
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763 318 NAPQALARVNRRGIPIAALGVSAFATALCVVINYFMPG--KAFELLMglVVSAIIIN--WAMISVIHLRFRQAKRAAGET 393
Cdd:PRK11049 329 VAPKAFAKLSKRAVPAKGLTFSCICLLGGVVLLYVNPSviGAFTLVT--TVSAILFMfvWTIILCSYLVYRKQRPHLHEK 406
                        410       420       430       440       450
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 490305763 394 TRFRSLGYPLTNYFCLAFMAAILVVMFRTPELRLSVYLIPVWLVVLALGYRFRQR 448
Cdd:PRK11049 407 SIYKMPLGKLMCWVCMAFFAFVLVLLTLEDDTRQALIVTPLWFIALGLGYLFIGK 461
PRK10746 PRK10746
putative transport protein YifK; Provisional
5-443 1.94e-117

putative transport protein YifK; Provisional


Pssm-ID: 182694  Cd Length: 461  Bit Score: 351.81  E-value: 1.94e-117
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763   5 QDNDGLKRGLKNRHIQLIALGGAIGTGLFLGIAQTIRMAGPSVLLGYALAGVVAFFIMRQLGEMVVDEPVAGSFSYFASK 84
Cdd:PRK10746   3 DNKPELQRGLEARHIELIALGGTIGVGLFMGAASTLKWAGPSVLLAYIIAGLFVFFIMRSMGEMLFLEPVTGSFAVYAHR 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763  85 YCGHFTGFLSGWNYWVLYVLVSMAELSAVGIYVQYWWPGVPTWISALVFFVVINAVNLASVKSYGETEFWFSIVKVAAII 164
Cdd:PRK10746  83 YMSPFFGYLTAWSYWFMWMAVGISEITAIGVYVQFWFPEMAQWIPALIAVALVALANLAAVRLYGEIEFWFAMIKVTTII 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763 165 GMI--GFGGYLLLSGHAGPDAGVANLWRHGGFFPNGIGGLAMAMAVIMFSFGGLELVGITAAEADDPSHSIPRATNQVIY 242
Cdd:PRK10746 163 VMIviGLGVIFFGFGNGGQSIGFSNLTEHGGFFAGGWKGFLTALCIVVASYQGVELIGITAGEAKNPQVTLRSAVGKVLW 242
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763 243 RILIFYIGALGVLLSLYPWQKVVTGGSPFVLIFHALSSDIAANVLNLVVLTAALSVYNSCVYCNSRMLYGLAQQGNAPQA 322
Cdd:PRK10746 243 RILIFYVGAIFVIVTIFPWNEIGSNGSPFVLTFAKIGITAAAGIINFVVLTAALSGCNSGMYSCGRMLYALAKNRQLPAA 322
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763 323 LARVNRRGIPIAALGVSAFATALCVVINYFMPG--KAFELLMGLVVSAIIINWAMISVIHLRFRQAKRAAGETTRFRSLG 400
Cdd:PRK10746 323 MAKVSRHGVPVAGVAVSILILLVGSCLNYIIPNpqRVFVYVYSASVLPGMVPWFVILISQLRFRRAHKAAIASHPFRSIL 402
                        410       420       430       440
                 ....*....|....*....|....*....|....*....|...
gi 490305763 401 YPLTNYFCLAFMAAILVVMFRTPELRLSVYLIPVWLVVLALGY 443
Cdd:PRK10746 403 FPWANYLTMAFLICVLIGMYFNEDTRMSLFVGIIFLLAVTLIY 445
AA_permease pfam00324
Amino acid permease;
18-448 1.03e-103

Amino acid permease;


Pssm-ID: 366028 [Multi-domain]  Cd Length: 467  Bit Score: 316.95  E-value: 1.03e-103
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763   18 HIQLIALGGAIGTGLFLGIAQTIRMAGP-SVLLGYALAGVVAFFIMRQLGEMVVDEPVAGSFSYFASKYCGHFTGFLSGW 96
Cdd:pfam00324   1 HVQMIALGGVIGTGLFVGSGSVLGQAGPaGALLGYLISGVVIFLVMLSLGEISTNGPVSGGFYTYASRFLGPSLGFATGW 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763   97 NYWVLYVLVSMAELSAVGIYVQYWWPGV---PTWISALVFFVVINAVNLASVKSYGETEFWFSIVKVAAIIGMIGFGGYL 173
Cdd:pfam00324  81 NYWLSWITVLALELTAASILIQFWELVPdipYLWVWGAVFLVLLTIINLVGVKWYGEAEFWFALIKIIAIIGFIIVGIIL 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763  174 LLSGHAGPDAGVANLWRHGG--FFPNGI-GGLAMAMAVIMFSFGGLELVGITAAEADDPSHSIPRATNQVIYRILIFYIG 250
Cdd:pfam00324 161 LSGGNPNDGAIFRYLGDNGGknNFPPGFgKGFISVFVIAFFAFTGIELVGIAAGEVKNPEKSIPKAILQVIWRITIFYIL 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763  251 ALGVLLSLYPW------QKVVTGGSPFVLIFHALSSDIAANVLNLVVLTAALSVYNSCVYCNSRMLYGLAQQGNAPQALA 324
Cdd:pfam00324 241 SLLAIGLLVPWndpgllNDSASAASPFVIFFKFLGISGLAPLINAVILTAALSAANSSLYSGSRMLYSLARDGLAPKFLK 320
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763  325 RVNRRGIPIAALGVSAFATALCVVINYFMPGKAFELLMGLVVSAIIINWAMISVIHLRFRQAKRAAG---ETTRFRSLGY 401
Cdd:pfam00324 321 KVDKRGVPLRAILVSMVISLLALLLASLNPAIVFNFLLAISGLSGLIVWGLISLSHLRFRKAFKYQGrsiDELPFKAPLG 400
                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763  402 PLTNYFCLAFMAAILVVMFRTPELR-------------LSVYLIPVWLVVLALGYRFRQR 448
Cdd:pfam00324 401 PLGVILGLAAIIIILIIQFLYAFLPvpggpknwgagsfAAAYLIVLLFLIILIGVKLHVK 460
2A0310 TIGR00913
amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]
11-420 6.07e-96

amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273334  Cd Length: 478  Bit Score: 297.27  E-value: 6.07e-96
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763   11 KRGLKNRHIQLIALGGAIGTGLFLGIAQTIRMAGP-SVLLGYALAGVVAFFIMRQLGEMVVDEPV-AGSFSYFASKYCGH 88
Cdd:TIGR00913   1 KKSLKQRHIQMIALGGTIGTGLLVGSGTALATGGPaGLLIGYAIMGSIIYCVMQSLGEMATFYPVvSGSFATYASRFVDP 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763   89 FTGFLSGWNYWVLYVLVSMAELSAVGIYVQYWWPGVPTWISALVFFVVINAVNLASVKSYGETEFWFSIVKVAAIIGMIG 168
Cdd:TIGR00913  81 AFGFAVGWNYWLQWLIVLPLELVTASMTIQYWTDKVNPAVWIAIFYVFIVIINLFGVKGYGEAEFWFSSIKILAIIGFII 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763  169 FgGYLLLSGHAGPDAGV-ANLWRHGGFFPNGIG-----GLAMAMAVIMFSFGGLELVGITAAEADDPSHSIPRATNQVIY 242
Cdd:TIGR00913 161 L-SIILNCGGGPNHGYIgFRYWHDPGAFAGGTIggrfkGVCSVFVTAAFSFGGTELVALTAGEAANPRKSIPRAAKRTFW 239
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763  243 RILIFYIGALGVLLSLYPWQ---------KVVTGGSPFVLIFHALSSDIAANVLNLVVLTAALSVYNSCVYCNSRMLYGL 313
Cdd:TIGR00913 240 RILVFYILTLFLIGFLVPYNdprllssssSSDSAASPFVIAIQNHGIKVLPHIFNAVILISVLSAANSSLYASSRTLYAL 319
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763  314 AQQGNAPQALARVNRRGIPIAALGVSAFATALCVVINYFMPGKAFELLMGLVVSAIIINWAMISVIHLRFRQAKRAAGET 393
Cdd:TIGR00913 320 AHQGLAPKIFAYVDRRGVPYVAVIVSSLFGLLAFLAVSKKEAEVFTWLLNISGLSGFFTWMCICLSHIRFRKAMKAQGRS 399
                         410       420       430
                  ....*....|....*....|....*....|
gi 490305763  394 TR---FRSLGYPLTNYFCLAFMAAILVVMF 420
Cdd:TIGR00913 400 LDelpYKSQTGPYGSYYALFFNILILIAQG 429
PRK15049 PRK15049
L-asparagine permease;
8-443 1.20e-87

L-asparagine permease;


Pssm-ID: 185009  Cd Length: 499  Bit Score: 276.50  E-value: 1.20e-87
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763   8 DGLKRGLKNRHIQLIALGGAIGTGLFLGIAQTIRMAGPSVLLGYALAGVVAFFIMRQLGEMVVDEPVAGSFSYFASKYCG 87
Cdd:PRK15049  24 EGYHKAMGNRQVQMIAIGGAIGTGLFLGAGARLQMAGPALALVYLICGLFSFFILRALGELVLHRPSSGSFVSYAREFLG 103
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763  88 HFTGFLSGWNYWVLYVLVSMAELSAVGIYVQYW--WPGVPTWISALVFFVVINAVNLASVKSYGETEFWFSIVKVAAIIG 165
Cdd:PRK15049 104 EKAAYVAGWMYFINWAMTGIVDITAVALYMHYWgaFGGVPQWVFALAALTIVGTMNMIGVKWFAEMEFWFALIKVLAIVT 183
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763 166 MIGFGGYLLLSGHA--GPDAGVANLWRHGGFFPNGIGGLAMAMAVIMFSFGGLELVGITAAEADDPSHSIPRATNQVIYR 243
Cdd:PRK15049 184 FLVVGTVFLGSGQPldGNTTGFHLITDNGGFFPHGLLPALVLIQGVVFAFASIEMVGTAAGECKDPQTMVPKAINSVIWR 263
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763 244 ILIFYIGALGVLLSLYPWQKVVTGGSPFVLIFHALSSDIAANVLNLVVLTAALSVYNSCVYCNSRMLYGLAQQGNAPQAL 323
Cdd:PRK15049 264 IGLFYVGSVVLLVMLLPWSAYQAGQSPFVTFFSKLGVPYIGSIMNIVVLTAALSSLNSGLYCTGRILRSMAMGGSAPSFM 343
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763 324 ARVNRRGIPIAALGVSAFATALCVVINYFMPGKAFELLMGLVVSAIIINWAMISVIHLRFRQA-KRAAGETTRFRSLGYP 402
Cdd:PRK15049 344 AKMSRQHVPYAGILATLVVYVVGVFLNYLVPSRVFEIVLNFASLGIIASWAFIIVCQMRLRKAiKEGKAADVSFKLPGAP 423
                        410       420       430       440
                 ....*....|....*....|....*....|....*....|..
gi 490305763 403 LTNYFCLAFMAAILVVM-FRTPELRLSVYLIPVWLVVLALGY 443
Cdd:PRK15049 424 FTSWLTLLFLLSVLVLMaFDYPNGTYTIAALPIIGILLVIGW 465
PRK10197 PRK10197
GABA permease;
21-429 6.42e-81

GABA permease;


Pssm-ID: 182297  Cd Length: 446  Bit Score: 257.63  E-value: 6.42e-81
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763  21 LIALGGAIGTGLFLGIAQTIRMAGPSVLLGYALAGVVAFFIMRQLGEMVVDEPVAGSFSYFASKYCGHFTGFLSGWNYWV 100
Cdd:PRK10197   1 MLSIAGVIGASLFVGSSVAIAEAGPAVLLAYLFAGLLVVMIMRMLAEMAVATPDTGSFSTYADKAIGRWAGYTIGWLYWW 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763 101 LYVLVSMAELSAVGIYVQYWWPGVPTWISALVFFVVINAVNLASVKSYGETEFWFSIVKVAAIIGMIGFGGYLLLSGHAG 180
Cdd:PRK10197  81 FWVLVIPLEANIAAMILHSWVPGIPIWLFSLVITLALTGSNLLSVKNYGEFEFWLALCKVIAILAFIFLGAVAISGFYPY 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763 181 PD-AGVANLWRHGGFFPNGIGGLAMAMAVIMFSFGGLELVGITAAEADDPSHSIPRATNQVIYRILIFYIGALGVLLSLY 259
Cdd:PRK10197 161 AEvSGISRLWDSGGFMPNGFGAVLSAMLITMFSFMGAEIVTIAAAESDTPEKHIVRATNSVIWRISIFYLCSIFVVVALI 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763 260 PWQKV-VTGGSPFVLIFHALSSDIAANVLNLVVLTAALSVYNSCVYCNSRMLYGLAQQGNAPQALARVNRRGIPIAALGV 338
Cdd:PRK10197 241 PWNMPgLKAVGSYRSVLELLNIPHAKLIMDCVILLSVTSCLNSALYTASRMLYSLSRRGDAPAVMGKINRSKTPYVAVLL 320
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763 339 SAFATALCVVINYFMPGKAFELLMGLVVSAIIINWAMISVIHLRFRQAKRAAGETTRFRSLGYPLTNYFCLAFMAAILVV 418
Cdd:PRK10197 321 STGAAFLTVVVNYYAPAKVFKFLIDSSGAIALLVYLVIAVSQLRMRKILRAEGSEIRLRMWLYPWLTWLVIGFITFVLVV 400
                        410
                 ....*....|.
gi 490305763 419 MFRTPELRLSV 429
Cdd:PRK10197 401 MLFRPAQQLEV 411
PRK11387 PRK11387
S-methylmethionine permease;
1-430 2.06e-77

S-methylmethionine permease;


Pssm-ID: 236904  Cd Length: 471  Bit Score: 249.00  E-value: 2.06e-77
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763   1 MATDQDNDGLKRGLKNRHIQLIALGGAIGTGLFLGIAQTIRMAGPS-VLLGYALAGVVAFFIMRQLGEMVVDEPVAGSFS 79
Cdd:PRK11387   3 EPTSQQAGQFKRTMKVRHLVMLSLGGVIGTGLFFNTGYIISTTGAAgTLLAYLIGALVVYLVMQCLGELSVAMPETGAFH 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763  80 YFASKYCGHFTGFLSGWNYWVLYVLVSMAELSAVGIYVQYWWPGVPTWISALVFFVVINAVNLASVKSYGETEFWFSIVK 159
Cdd:PRK11387  83 VYAARYLGPATGYTVAWLYWLTWTVALGSSLTAAGFCMQYWFPQVPVWPWCLLFCALIFGLNVVSTRFFAEGEFWFSLIK 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763 160 VAAIIGMIGFGGY----LLLSGHAGPDAGVANLwRHGGFFPNGIGGLAMAMAVIMFSFGGLELVGITAAEADDPSHSIPR 235
Cdd:PRK11387 163 VVTILAFIVLGGAaifgFIPMQDGSPAPGLRNL-TAEGWFPHGGLPILMTMVAVNFAFSGTELIGIAAGETENPAKVIPV 241
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763 236 ATNQVIYRILIFYIGALGVLLSLYPWQKVVTGGSPFVLIFHALSSDIAANVLNLVVLTAALSVYNSCVYCNSRMLYGLAQ 315
Cdd:PRK11387 242 AIRTTIARLVIFFVGTVLVLAALIPMQQAGVEKSPFVLVFEKVGIPYAADIFNFVILTAILSAANSGLYASGRMLWSLSN 321
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763 316 QGNAPQALARVNRRGIPIAALGVSAFATALCVVINYFMPGKAFELLMGLVVSAIIINWAMISVIHLRFRQAKRAAG---E 392
Cdd:PRK11387 322 EGTLPACFARLTKRGIPLTALSVSMLGGLLALFSSVVAPDTVFVALSAISGFAVVAVWLSICASHFMFRRRHLRDGkalS 401
                        410       420       430
                 ....*....|....*....|....*....|....*...
gi 490305763 393 TTRFRSLGYPLTNYFCLAFMAAILVVMFRTPELRLSVY 430
Cdd:PRK11387 402 ELAYRAPWYPLTPILGFVLCLLACVGLAFDPSQRIALW 439
PRK10836 PRK10836
lysine transporter; Provisional
9-419 3.66e-77

lysine transporter; Provisional


Pssm-ID: 182767  Cd Length: 489  Bit Score: 248.97  E-value: 3.66e-77
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763   9 GLKRGLKNRHIQLIALGGAIGTGLFLGIAQTIRMAGPS-VLLGYALAGVVAFFIMRQLGEMVVDEPVAGSFSYFASKYCG 87
Cdd:PRK10836  12 GLRRELKARHLTMIAIGGSIGTGLFVASGATISQAGPGgALLSYMLIGLMVYFLMTSLGELAAYMPVSGSFATYGQNYVE 91
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763  88 HFTGFLSGWNYWVLYVLVSMAELSAVGIYVQYWWPGVPTWISALVFFVVINAVNLASVKSYGETEFWFSIVKVAAIIGMI 167
Cdd:PRK10836  92 EGFGFALGWNYWYNWAVTIAVDLVAAQLVMSWWFPDTPGWIWSALFLGVIFLLNYISVRGFGEAEYWFSLIKVTTVIVFI 171
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763 168 GFgGYLLLSG--HAGPDAGVANlWRHG-GFFPNGIGGLAMAMAVIMFSFGGLELVGITAAEADDPSHSIPRATNQVIYRI 244
Cdd:PRK10836 172 IV-GVLMIIGifKGAEPAGWSN-WTIGdAPFAGGFAAMIGVAMIVGFSFQGTELIGIAAGESEDPAKNIPRAVRQVFWRI 249
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763 245 LIFYIGALGVLLSLYPWQKVV--------TGGSPFVLIFHALSSDIAANVLNLVVLTAALSVYNSCVYCNSRMLYGLAQQ 316
Cdd:PRK10836 250 LLFYVFAILIISLIIPYTDPSllrndvkdISVSPFTLVFQHAGLLSAAAVMNAVILTAVLSAGNSGMYASTRMLYTLACD 329
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763 317 GNAPQALARVNRRGIPIAALGVSAFATALCVVINYFMPGKAFELLMGLVVSAIIINWAMISVIHLRFRQAKRAAGETTR- 395
Cdd:PRK10836 330 GKAPRIFAKLSRGGVPRNALYATTVIAGLCFLTSMFGNQTVYLWLLNTSGMTGFIAWLGIAISHYRFRRGYVLQGHDLNd 409
                        410       420
                 ....*....|....*....|....*.
gi 490305763 396 --FRSLGYPLTNYFclAFMAAILVVM 419
Cdd:PRK10836 410 lpYRSGFFPLGPIF--AFVLCLIITL 433
PotE COG0531
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
3-444 3.66e-48

Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];


Pssm-ID: 440297 [Multi-domain]  Cd Length: 438  Bit Score: 171.23  E-value: 3.66e-48
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763   3 TDQDNDGLKRGLKNRHIQLIALGGAIGTGLFLGIAQTIRMAGPSVLLGYALAGVVAFFIMRQLGEMVVDEPVAGSFSYFA 82
Cdd:COG0531    2 SRGESSELKRKLGLFDLVALGVGAIIGAGIFVLPGLAAGLAGPAAILAWLIAGLLALLVALSYAELASAFPRAGGAYTYA 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763  83 SKYCGHFTGFLSGWNYWVLYVLVSMAELSAVGIYVQYWWPGVPTWISALVFFVVINAVNLASVKSYGETEFWFSIVKVAA 162
Cdd:COG0531   82 RRALGPLLGFLAGWALLLSYVLAVAAVAVAFGGYLSSLFPAGGSVLIALVLILLLTLLNLRGVKESAKVNNILTVLKLLV 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763 163 IIGMIGFGGYLLLSGHAGPdagvanlwrhggFFPN--GIGGLAMAMAVIMFSFGGLELVGITAAEADDPSHSIPRATNQV 240
Cdd:COG0531  162 LLLFIVVGLFAFDPANFTP------------FLPAggGLSGVLAALALAFFAFTGFEAIANLAEEAKNPKRNIPRAIILS 229
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763 241 IYRILIFYIGALGVLLSLYPWQKVVTGGSPFVLIFHALSSDIAANVLNLVVLTAALSVYNSCVYCNSRMLYGLAQQGNAP 320
Cdd:COG0531  230 LLIVGVLYILVSLALTGVVPYDELAASGAPLADAAEAVFGPWGAILIALGALLSLLGALNASILGASRLLYAMARDGLLP 309
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763 321 QALARVN-RRGIPIAALGVSAFATALCVVInyfmPGKAFELLMGLVVSAIIINWAMISVIHLRFRqakRAAGETTRFRSL 399
Cdd:COG0531  310 KVFAKVHpRFGTPVNAILLTGVIALLLLLL----GAASFTALASLASVGVLLAYLLVALAVIVLR---RRRPDLPRPFRV 382
                        410       420       430       440
                 ....*....|....*....|....*....|....*....|....*
gi 490305763 400 GYPLTNYFCLAFMAAILVVMFRTPELRLSVYLIPVWLVVLALGYR 444
Cdd:COG0531  383 PLPLIPILGILLCLFLLYLLGPGALLIGLVLLAIGLLLYLLYRRR 427
AA_permease_2 pfam13520
Amino acid permease;
22-438 7.54e-21

Amino acid permease;


Pssm-ID: 404414 [Multi-domain]  Cd Length: 427  Bit Score: 94.30  E-value: 7.54e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763   22 IALGGAIGTGLFlgIAQTIRMAGPSVLLGYALAGVVAFFIMR-QLGEMVVDEPVAGSFSYFASKYCGHFTGFLSGWNYWV 100
Cdd:pfam13520   9 LVIGSVIGSGIF--VAPLVASGGPALIVWGWIAAIIFSLAVGlVYAELSSALPRSGGIYVYLENAFGKFVAFLAGWSNWF 86
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763  101 LYVLVSMAELSAVGIYVQYWWPG------VPTWISALVFFVVINAVNLASVKSYGETEFWFSIVKVAAIIGMIGFGGYLL 174
Cdd:pfam13520  87 AYVLGLASSASVAASYLLSALGPdlvpttWLTYGIAIAILIIFAIINIRGVRESAKIQNILGILKLLLPLILIIILGLVT 166
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763  175 LSGHAGPDAGVANlwrhGGFFPNGIGGLAMAMAVIMFSFGGLELVGITAAEADDPshSIPRATNQVIYRILIFYIGALGV 254
Cdd:pfam13520 167 ADGGGFNLLSGEW----HTFFPDGWPGVFAGFLGVLWSFTGFESAANVSEEVKKR--NVPKAIFIGVIIVGVLYILVNIA 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763  255 LLSLYPWQKVVTG---GSPFVLIFHALSSDIAANVLNLVVLTAALSVYNSCVYCNSRMLYGLAQQGNAPQA--LARVNRR 329
Cdd:pfam13520 241 FFGVVPDDEIALSsglGQVAALLFQAVGGKWGAIIVVILLALSLLGAVNTAIVGASRLLYALARDGVLPFSrfFAKVNKF 320
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763  330 GIPIAALGVSAFATALCVVINYFMPGkAFELLMGLvvSAIIINWAMISVIHLRFRQAKRAAGETTRFRSLGYPLTNYFCL 409
Cdd:pfam13520 321 GSPIRAIILTAILSLILLLLFLLSPA-AYNALLSL--SAYGYLLSYLLPIIGLLILRKKRPDLGRIPGRWPVAIFGILFS 397
                         410       420       430
                  ....*....|....*....|....*....|
gi 490305763  410 AFMAAILVVMFRTPELRLSV-YLIPVWLVV 438
Cdd:pfam13520 398 LFLIVALFFPPVGPATGSSLnYAIILIVAF 427
2A0303 TIGR00906
cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides ...
10-345 1.97e-15

cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273330 [Multi-domain]  Cd Length: 557  Bit Score: 78.70  E-value: 1.97e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763   10 LKRGLKNRHIQLIALGGAIGTGLFLGIAQTIRM-AGPSVLLGYALAGVVAFFIMRQLGEMVVDEPVAGSFSYFASKYCGH 88
Cdd:TIGR00906  26 MKRCLTTWDLMALGIGSTIGAGIYVLTGEVARNdSGPAIVLSFLISGLAAVLSGFCYAEFGARVPKAGSAYLYSYVTVGE 105
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763   89 FTGFLSGWNYWVLYV----------------LVSMAELSAVGIYVQYWWPGVPTWISALVFFVVINAVNLASVKSYGETe 152
Cdd:TIGR00906 106 LWAFITGWNLILEYVigtaavarswsayfdeLLNKQIGQFRRTYFKLNYDGLAEYPDFFAVCLILLLAVLLSFGVKESA- 184
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763  153 fWFSivKVAAIIGMIgfggYLLLSGHAGPDAGVANLWR------HGGFFPNGIGGLAMAMAVIMFSFGGLELVGITAAEA 226
Cdd:TIGR00906 185 -WVN--KIFTAINIL----VLLFVIIAGFTKADVANWSiteekgAGGFMPYGFTGVLSGAATCFFAFIGFDAIATTGEEV 257
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763  227 DDPSHSIPRATNQVIYRILIFYIGALGVLLSLYPWQKVVTgGSPFVLIFHALSSDIAANVLNLVVLTAALSVYNSCVYCN 306
Cdd:TIGR00906 258 KNPQRAIPIGIVTSLLVCFVAYFLMSAALTLMMPYYLLDP-DAPFPVAFEYVGWDPAKYIVAVGALCGMSTSLLGGMFPL 336
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|
gi 490305763  307 SRMLYGLAQQGNAPQALARVN-RRGIPIAALGVSAFATAL 345
Cdd:TIGR00906 337 PRVIYAMARDGLLFKWLAQINsKTKTPINATVVSGAIAAL 376
2A0302 TIGR00905
transporter, basic amino acid/polyamine antiporter (APA) family; This family includes several ...
19-371 5.17e-14

transporter, basic amino acid/polyamine antiporter (APA) family; This family includes several families of antiporters that, rather commonly, are encoded next to decarboxylases that convert one of the antiporter substrates into the other. This arrangement allows a cycle that can remove proteins from the cytoplasm and thereby protect against acidic conditions. [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 129983  Cd Length: 473  Bit Score: 73.94  E-value: 5.17e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763   19 IQLIAL--GGAIGTGLFLGIAQTIRMAGPS-VLLGYALAGVVAF---FIMRQLGEMVvDEPVAGSFSYfASKYCGHFTGF 92
Cdd:TIGR00905  12 FALTALviGSMIGSGIFSLPQNLASVAGPGaVIIGWIITGVGMLalaFVFAILATKK-PELDGGIYAY-AREGFGPYIGF 89
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763   93 LSGWNYWVLYVLVSMAELSAVGIYVQYWWP---GVPTWISALVFFVVINAVNLASVKSYGETEFWFSIVKVAAIIGMIGF 169
Cdd:TIGR00905  90 MSGWGYWLSAWIGNVAYAVLLFSALGYFFPlfgSGNPVPSILGASVLLWVFTFLVLRGVRQAAFINTITTIAKLIPLFLF 169
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763  170 ggyLLLSGHA-GPDAGVANLWRHGGFFPNGIG-GLAMAMAVIMFSFGGLELVGITAAEADDPShSIPRATNQVIYRILIF 247
Cdd:TIGR00905 170 ---IIIGWFWfKLDLFTADFWGHDVPSLGSVFsQVKNTMLVTLWVFIGIEGAVVSSGRAKNKS-DVGKATVLGTLGALVI 245
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763  248 YIGALGVLLSLYPWQKVVTGGSPFVLIF-HALSSDIAANVLNLVVLTAALSVYNSCVYCNSRMLYGLAQQGNAPQALARV 326
Cdd:TIGR00905 246 YILITLLSLGVLPQQELANLPNPSMAAVlEMIVGKWGAVLISLGLIISVLGSLLSWTMLAAEVPFSAAKDGLFPKIFGRV 325
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*
gi 490305763  327 NRRGIPIAALGVSAFATALCVVINYFmPGKAFELLMGLVVSAIII 371
Cdd:TIGR00905 326 NKNGAPSVALLLTNILIQLFLLLTLL-TSSAYNVLVSLAVVMILV 369
2A0308 TIGR00911
L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and ...
22-370 2.20e-07

L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273332 [Multi-domain]  Cd Length: 501  Bit Score: 53.21  E-value: 2.20e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763   22 IALGGAIGTGLFLGIAQTIRMAGpSV---LLGYALAGVVAFFIMRQLGEMVVDEPVAGS-FSYFASKYcGHFTGFLSGWN 97
Cdd:TIGR00911  52 IIVGTIIGSGIFVSPKGVLKNAG-SVglaLIMWAVCGIFSIVGALVYAELGTTIPKSGGeYNYILEVF-GPLLAFLRLWI 129
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763   98 YWVLYVLVSMAELSAV-GIYV-QYWWPG--VPTW----ISALVFFVVInAVNLASVKSYGETEFWFSIVKVAAIIGMIGF 169
Cdd:TIGR00911 130 ELLVIRPGSQAVNALNfAIYIlTPVFPDceVPEWairlVAVLCVLLLT-LVNCLSVKWATRVQDIFTACKLLALLLIIIT 208
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763  170 GGYLLLSGhagpdaGVANLWRHGGF--FPNGIGGLAMAMAVIMFSFGGLELVGITAAEADDPSHSIPRATNQVIYRILIF 247
Cdd:TIGR00911 209 GWVQLGKG------GVESLNPKNAFegTETSAGGIVLAFYSGIWAYGGWNYLNFVTEEVKNPYRTLPIAIIISMPIVTFI 282
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763  248 YIGALGVLLSLYPWQKVVTGGSPFVLIFHALSSDIAANVLNLVVLTAALSVyNSCVYCNSRMLYGLAQQGNAPQALARVN 327
Cdd:TIGR00911 283 YVLTNIAYFTVLSPEELLASLAVAVDFGERLLGVMSWAMPALVGLSCFGSV-NGSLFSSSRLFFVGGREGHLPSLLSMIH 361
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|.
gi 490305763  328 -RRGIPIAALGVS-------AFATALCVVINYFmpGKAFELLMGLVVSAII 370
Cdd:TIGR00911 362 vKRLTPLPSLLIVctltllmLFSGDIYSLINLI--SFANWLFNALAVAGLL 410
frlA PRK11357
amino acid permease;
5-317 7.39e-06

amino acid permease;


Pssm-ID: 183096 [Multi-domain]  Cd Length: 445  Bit Score: 48.31  E-value: 7.39e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763   5 QDNDGLKRGLKNRHIQLIALGGAIGTGLFLGIAQTIRMAGPSVL--LGYALAGVVAFFIMRQLGEMVVDEPVAGSFSYFA 82
Cdd:PRK11357   1 MGSQELQRKLGFWAVLAIAVGTTVGSGIFVSVGEVAKAAGTPWLtvLAFVIGGLIVIPQMCVYAELSTAYPENGADYVYL 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763  83 SKYCGHFTGFLSGWNYWVLYVLVSMAELS-AVGIYVQYWWPGVPTWIS--ALVFFVVINAVNLASVKSYGETEFWFSIVK 159
Cdd:PRK11357  81 KNAGSRPLAFLSGWASFWANDAPSLSIMAlAIVSNLGFLTPIDPLLGKfiAAGLIIAFMLLHLRSVEGGAAFQTLITIAK 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763 160 VAAIIGMIGFGGYLLLSGHAGPDAgVANLWRHGGFfpngiGGLAMAMAVIMFSFGGLELVGITAAEADDPSHSIPRATNQ 239
Cdd:PRK11357 161 IIPFTIVIGLGIFWFKAENFAAPT-TTAIGATGSF-----MALLAGISATSWSYTGMASICYMTGEIKNPGKTMPRALIG 234
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763 240 VIYRILIFYIGALGVLLSLYPWQKVVTGGSPFVLIFHAL-----SSDIAANVLNLVVLTAALSvynSCVYCNSRMLYGLA 314
Cdd:PRK11357 235 SCLLVLVLYTLLALVISGLMPFDKLANSETPISDALTWIpalgsTAGIFVAITAMIVILGSLS---SCVMYQPRLEYAMA 311

                 ...
gi 490305763 315 QQG 317
Cdd:PRK11357 312 KDN 314
PRK10644 PRK10644
arginine/agmatine antiporter;
21-340 1.34e-05

arginine/agmatine antiporter;


Pssm-ID: 182613 [Multi-domain]  Cd Length: 445  Bit Score: 47.48  E-value: 1.34e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763  21 LIALGGAIGTGLFLGIAQTIRMAGPSVLlGYALAGVVAFFIMRQLGEMVVDEPVAGSFSYFASKYCGHFTGFLSGWNYWV 100
Cdd:PRK10644  17 LMVAGNIMGSGVFLLPANLASTGGIAIY-GWLVTIIGALGLSMVYAKMSSLDPSPGGSYAYARRCFGPFLGYQTNVLYWL 95
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763 101 LYVLVSMAELSAVGIYVQYWWPGVP-------TWISALVFFVVINAVNLASVksyGETEFWFSIVKVAAIIGMIGFGgYL 173
Cdd:PRK10644  96 ACWIGNIAMVVIGVGYLSYFFPILKdplvltiTCVVVLWIFVLLNIVGPKMI---TRVQAVATVLALIPIVGIAVFG-WF 171
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763 174 LLSGHAGPDAgvanlWRHGGFfpNGIGGLAMAMAVIMFSFGGLELVGITAAEADDPSHSIPRATNQVIYRILIFYIGALG 253
Cdd:PRK10644 172 WFRGETYMAA-----WNVSGL--GTFGAIQSTLNVTLWSFIGVESASVAAGVVKNPKRNVPIATIGGVLIAAVCYVLSST 244
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763 254 VLLSLYPWQKVVTGGSPFVLIFHALSSDIAANVLNLVVLTAALSVYNSCVYCNSRMLYGLAQQGNAPQALARVNRRGIPI 333
Cdd:PRK10644 245 AIMGMIPNAALRVSASPFGDAARMALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGLFPPIFARVNKAGTPV 324

                 ....*..
gi 490305763 334 AALGVSA 340
Cdd:PRK10644 325 AGLLIVG 331
cadB PRK10435
cadaverine/lysine antiporter;
210-352 4.77e-03

cadaverine/lysine antiporter;


Pssm-ID: 182458  Cd Length: 435  Bit Score: 39.35  E-value: 4.77e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490305763 210 MFSFGGLELVGITAAEADDPSHSIPRATNQVIYRILIFYIGALGVLLSLYPWQKVVTGGSPFVLIFHALSSDIAANVLNL 289
Cdd:PRK10435 197 LWAFVGVESAAVSTGMVKNPKRTVPLATMLGTGLAGIIYIAATQVISGMFPASVMAASGAPFAISASTILGNWAAPLVSA 276
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 490305763 290 VVLTAALSVYNSCVycnsrMLYG-----LAQQGNAPQALARVNRRGIPIAALGVSAFA-TALCVVINYF 352
Cdd:PRK10435 277 FTAFACLTSLGSWM-----MLVGqagvrAANDGNFPKVYGEVDKNGIPKKGLLLAAVKmTALMILITLM 340
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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