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Conserved domains on  [gi|490364660|ref|WP_004244332|]
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MULTISPECIES: fimbrial protein [Proteus]

Protein Classification

fimbrial protein( domain architecture ID 10007530)

fimbrial protein similar to Escherichia coli fimbrial adapter PapF, which is required for the correct presentation of the PapG adhesin at the distal end of the tip fibrillum

Gene Ontology:  GO:0009289|GO:0007155
PubMed:  1670938|22411982|2890081

Graphical summary

 Zoom to residue level

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List of domain hits

 Name Accession Description Interval E-value
FimA COG3539
Pilin (type 1 fimbrial protein) [Cell motility];
1-183 3.85e-28

Pilin (type 1 fimbrial protein) [Cell motility];


:

Pssm-ID: 442760 [Multi-domain]  Cd Length: 172  Bit Score: 103.19  E-value: 3.85e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490364660   1 MKLNKLAMFAIASMAFSAtvaqAASGDGTITFTGKVIDAPCGIATESANQAIDFGQISKSLLEKDG-ISQVKQIPIKLVN 79
Cdd:COG3539    1 MKKLLLALLLALALSAAA----AAAADGTVNFTGTVVAPTCTINTGSKDQTVDLGTVSTSDLNGVGsTSGPKPFSIKLTN 76

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490364660  80 CDltkagsdtgaAGSYKGVKVTFNGNTITGATEELATTG---NTGTAIVISgTTTGSMVKFNEAGELQAL-GNNDNTLMY 155
Cdd:COG3539   77 CD----------AGTSNSVKVTFTGTADSANPGLLANTGsggASGVGIQLL-DSDGTPIPLGTPSSAVTLtSNGSATLPF 145

                        170       180
                 ....*....|....*....|....*...
gi 490364660 156 TAWAkKATNGTIAEGEFNATTNFTLAYE 183
Cdd:COG3539  146 YARY-VATGATVTAGSFNATATFTIDYQ 172
 
Name Accession Description Interval E-value
FimA COG3539
Pilin (type 1 fimbrial protein) [Cell motility];
1-183 3.85e-28

Pilin (type 1 fimbrial protein) [Cell motility];


Pssm-ID: 442760 [Multi-domain]  Cd Length: 172  Bit Score: 103.19  E-value: 3.85e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490364660   1 MKLNKLAMFAIASMAFSAtvaqAASGDGTITFTGKVIDAPCGIATESANQAIDFGQISKSLLEKDG-ISQVKQIPIKLVN 79
Cdd:COG3539    1 MKKLLLALLLALALSAAA----AAAADGTVNFTGTVVAPTCTINTGSKDQTVDLGTVSTSDLNGVGsTSGPKPFSIKLTN 76

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490364660  80 CDltkagsdtgaAGSYKGVKVTFNGNTITGATEELATTG---NTGTAIVISgTTTGSMVKFNEAGELQAL-GNNDNTLMY 155
Cdd:COG3539   77 CD----------AGTSNSVKVTFTGTADSANPGLLANTGsggASGVGIQLL-DSDGTPIPLGTPSSAVTLtSNGSATLPF 145

                        170       180
                 ....*....|....*....|....*...
gi 490364660 156 TAWAkKATNGTIAEGEFNATTNFTLAYE 183
Cdd:COG3539  146 YARY-VATGATVTAGSFNATATFTIDYQ 172
PRK15209 PRK15209
long polar fimbrial protein LpfA; Provisional
 5-183 1.48e-17

long polar fimbrial protein LpfA; Provisional


Pssm-ID: 185131 [Multi-domain]  Cd Length: 174  Bit Score: 75.78  E-value: 1.48e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490364660   5 KLAMFAIASMAFSATVAQAA-SGDGTITFTGKVIDAPCGIATESANQAIDFGQISKSLLEKDG-ISQVKQIPIKLVNCDL 82
Cdd:PRK15209   2 KKVVFALSALALTSTSVFAAeSGDGTVKFTGEIVDAPCVVSTDSQNQEVVLGQVKKSVFKAIGdKSSAKPFQIKLEDCDI 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490364660  83 TkagSDTGAAGSYKGVKVTFNGNTITGATEELATTGnTGTAIVisgTTTGSMVKFNEAGELQALGNNDNTLMYTAwAKKA 162
Cdd:PRK15209  82 T---TNKKVNVSFNGVGDADDSTLVSVSTEAGAATG-VGIGIY---DNANTLVELNTGKSTTTLAAGQTVLYFTA-NYVS 153

                        170       180
                 ....*....|....*....|.
gi 490364660 163 TNGTIAEGEFNATTNFTLAYE 183
Cdd:PRK15209 154 TKDTVTTGYGNAEVDFNLSYE 174
Fimbrial pfam00419
Fimbrial protein;
30-183 7.92e-06

Fimbrial protein;


Pssm-ID: 425671  Cd Length: 152  Bit Score: 43.96  E-value: 7.92e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490364660   30 ITFTGKV--IDAPCGIATESANQaIDFGQISKSLLeKDGISQVKQIPIKL-VNCDLTKAGSDTGAAGSykGVKVTFNGNT 106
Cdd:pfam00419   1 INFTGTVtrVPATCKITAGTPIE-VDFGQIPVNEL-NAGGEGSRQKPFSItLECSSGSSAVKVTVGLF--GTADASSPNL 76

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 490364660  107 ITGATEELATTGnTGTAIVISGTTTGSMVKFNEAGELQALGNNDNTLMYTAWAKKATNGTIAEGEFNATTNFTLAYE 183
Cdd:pfam00419  77 LLTGNGAGAATG-VGIRLYDANGGALPPNNGTSSIPVSATAAVATGITFTASLVATTGGTPTAGDFNATATIVVDYQ 152
 
Name Accession Description Interval E-value
FimA COG3539
Pilin (type 1 fimbrial protein) [Cell motility];
1-183 3.85e-28

Pilin (type 1 fimbrial protein) [Cell motility];


Pssm-ID: 442760 [Multi-domain]  Cd Length: 172  Bit Score: 103.19  E-value: 3.85e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490364660   1 MKLNKLAMFAIASMAFSAtvaqAASGDGTITFTGKVIDAPCGIATESANQAIDFGQISKSLLEKDG-ISQVKQIPIKLVN 79
Cdd:COG3539    1 MKKLLLALLLALALSAAA----AAAADGTVNFTGTVVAPTCTINTGSKDQTVDLGTVSTSDLNGVGsTSGPKPFSIKLTN 76

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490364660  80 CDltkagsdtgaAGSYKGVKVTFNGNTITGATEELATTG---NTGTAIVISgTTTGSMVKFNEAGELQAL-GNNDNTLMY 155
Cdd:COG3539   77 CD----------AGTSNSVKVTFTGTADSANPGLLANTGsggASGVGIQLL-DSDGTPIPLGTPSSAVTLtSNGSATLPF 145

                        170       180
                 ....*....|....*....|....*...
gi 490364660 156 TAWAkKATNGTIAEGEFNATTNFTLAYE 183
Cdd:COG3539  146 YARY-VATGATVTAGSFNATATFTIDYQ 172
PRK15209 PRK15209
long polar fimbrial protein LpfA; Provisional
 5-183 1.48e-17

long polar fimbrial protein LpfA; Provisional


Pssm-ID: 185131 [Multi-domain]  Cd Length: 174  Bit Score: 75.78  E-value: 1.48e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490364660   5 KLAMFAIASMAFSATVAQAA-SGDGTITFTGKVIDAPCGIATESANQAIDFGQISKSLLEKDG-ISQVKQIPIKLVNCDL 82
Cdd:PRK15209   2 KKVVFALSALALTSTSVFAAeSGDGTVKFTGEIVDAPCVVSTDSQNQEVVLGQVKKSVFKAIGdKSSAKPFQIKLEDCDI 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490364660  83 TkagSDTGAAGSYKGVKVTFNGNTITGATEELATTGnTGTAIVisgTTTGSMVKFNEAGELQALGNNDNTLMYTAwAKKA 162
Cdd:PRK15209  82 T---TNKKVNVSFNGVGDADDSTLVSVSTEAGAATG-VGIGIY---DNANTLVELNTGKSTTTLAAGQTVLYFTA-NYVS 153

                        170       180
                 ....*....|....*....|.
gi 490364660 163 TNGTIAEGEFNATTNFTLAYE 183
Cdd:PRK15209 154 TKDTVTTGYGNAEVDFNLSYE 174
PRK15210 PRK15210
fimbrial protein;
6-182 1.84e-13

fimbrial protein;


Pssm-ID: 185132  Cd Length: 194  Bit Score: 65.49  E-value: 1.84e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490364660   6 LAMfAIASMAFSATVAQAAS-------GDGTITFTGKVIDAPCGIATESANQAIDFGQIS-KSLLEKDGISQVKQIPIKL 77
Cdd:PRK15210   7 LAM-AAAGMMYGASVFAADTtptagpfGSGKILFTGTITNSPCDIAPGDDAITVPFGQISyRKLNTADATTESKPFTIHL 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490364660  78 VNCDLTKAGSDT-GAAGSYKGVKVTFNGNTITGATEELATTGNTGTAIVISGTTTGSMVKFNEA---GELQALGNNDNTL 153
Cdd:PRK15210  86 QNCAFDPNIPDTaGSAGKMSKVTVSFSGTANTSKKAYTTSGSAQHVGVQLLKSDNTSIIEPNTPmpdGDAQQLQAGNNEL 165

                        170       180
                 ....*....|....*....|....*....
gi 490364660 154 MYTAWAKKATNGtIAEGEFNATTNFTLAY 182
Cdd:PRK15210 166 NFFARLIALDNG-VTPGDFNASVTYTLKY 193
PRK09733 PRK09733
fimbrial-like protein;
5-183 1.60e-11

fimbrial-like protein;


Pssm-ID: 182053  Cd Length: 181  Bit Score: 59.96  E-value: 1.60e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490364660   5 KLAMFAIASMAFSATVAQAASGDGTITFTGKVIDAPCGIATESANQAIDFGQISKSLLEKDGISQVKQIPIKLVNCDLTK 84
Cdd:PRK09733   3 KKSLLVAGVAMILSNNVFADEGHGIVKFKGEVISAPCSIKPGDEDLTVNLGEVADTVLKSDQKSLAEPFTIHLQDCMLSQ 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490364660  85 AGSdtgaagSYKGVKVTF-NGNTITGATEELATTGNT----------------------GTAIVISGTTTGSMVKFNEAG 141
Cdd:PRK09733  83 GGT------TYSKAKVTFtTANTMTGQSDLLKNTKETeiggatgvgvrildsqsgevtlGTPVVITFNNTNSYQELNFKA 156

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|..
gi 490364660 142 ELQALGnndntlmytawaKKATNGTIaegefNATTNFTLAYE 183
Cdd:PRK09733 157 RMESPS------------KDATPGNV-----YAQADYKIAYE 181
lpfA PRK15289
fimbrial protein; Provisional
 1-183 1.54e-09

fimbrial protein; Provisional


Pssm-ID: 185189  Cd Length: 190  Bit Score: 54.58  E-value: 1.54e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490364660   1 MKLNKLAMFAIASMAFSATVAQAAsgDGTITFTGKVIDAPCGIATESANQAIDFGQISKSLLEK-DGISQVKQIPIKLVN 79
Cdd:PRK15289   1 MKRNIIGGAFTLASLMLAGHALAE--DGVVHFVGEIVDTTCEVTSDTADQIVPLGKVSKNAFSGvGSLASPQKFSIKLEN 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490364660  80 CDLTkagsdtgaagsYKGVKVTFNGNTITGATEELA-----TTGN-------------TGTAIVISGTTTGSMVKFNEAG 141
Cdd:PRK15289  79 CPAT-----------YTQAAVRFDGTEAPGGDGDLKvgtplTAGNpgdftgtgqaiaaTGVGIRIFNQSDNSQVKLYNDS 147

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|..
gi 490364660 142 ELQALGNNDNTLMYTAWAKKATNGTIAEGEFNATTNFTLAYE 183
Cdd:PRK15289 148 AYTAIDAEGKAEMKFIARYVATNATVTAGTANADSQFTVEYK 189
PRK15283 PRK15283
fimbrial major subunit StfA;
5-182 3.08e-09

fimbrial major subunit StfA;


Pssm-ID: 185183  Cd Length: 186  Bit Score: 54.01  E-value: 3.08e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490364660   5 KLAMFAIASMAFSATVAQAASGDGTITFTGKVIDAPCGIATESANQAIDFGQISKSLLEKDGISQVKQIPIKLVNCDLTk 84
Cdd:PRK15283   6 KAAVAAALVMGVSSFANAAGSNTGTVTFTGTIEDSPCSIVVGDEHQTVNLGHIGTGSLMGGKESSKVDFHIGLENCAFT- 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490364660  85 agSDTGAAGSYKGVKVTFNGNTITGATEELATTGNTGTAIVIsGTTTGSMVKFNEAGELQALGNND-----NTLMYTAWA 159
Cdd:PRK15283  85 --TEKEASTVFSAIGNESSANPGSVALMRIGGGEMAGSSIVI-GNHLGSAIKLGDAYSENLTMNGSvaaakQTLNFKAWV 161

                        170       180
                 ....*....|....*....|....
gi 490364660 160 K-KATNGTIAEGEFNATTNFTLAY 182
Cdd:PRK15283 162 KgDSAASTIDTGEFSSTVNFTISY 185
PRK15194 PRK15194
type 1 fimbrial protein subunit FimA;
1-183 5.01e-09

type 1 fimbrial protein subunit FimA;


Pssm-ID: 237920  Cd Length: 185  Bit Score: 53.03  E-value: 5.01e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490364660   1 MKLnKLAMFAIASMAFSATVAQAASGD------GTITFTGKVIDAPCGIATESANQAIDFGQISKSLLEKDGiSQVKQIP 74
Cdd:PRK15194   1 MKL-RFISSAIASLLFVAGAAYAADPTpvsvdgGTIHFEGELVNAACSVNTDSADQTVTLGQYRTAIFTAVG-NTTALIP 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490364660  75 --IKLVNCDLTKAGSdtgAAGSYKGVKVTFNGNTITGATEELATTGnTGTAIVISGTTTgSMVKFNEA--GELQALGNND 150
Cdd:PRK15194  79 ftIQLNDCDPVVAAT---AAVAFSGQADATNDNLLAVASSTNTTTA-TGVGIEILDNTS-SILKPDGAtfSANQNLIEGT 153

                        170       180       190
                 ....*....|....*....|....*....|...
gi 490364660 151 NTLMYTAwAKKATNGTIAEGEFNATTNFTLAYE 183
Cdd:PRK15194 154 NTLHFSA-RYKATGTSASAGQANADATFIMKYE 185
PRK15261 PRK15261
fimbrial protein SteA; Provisional
 5-182 5.22e-07

fimbrial protein SteA; Provisional


Pssm-ID: 185169  Cd Length: 195  Bit Score: 47.85  E-value: 5.22e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490364660   5 KLAMFAIASMAFSATVAQAASGDGTITFTGKVIDAPCGIATESANQAIDFG-QISKSLLE--KDGISQVKQIPIKLVNCd 81
Cdd:PRK15261   8 KLAVTASLVMGIVSGAQAAGSNTAKVTFLGNIVDSPCSVTLDTEDQTVNMGsSIGNGTLSngKTTINNARTFHIDLEGC- 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490364660  82 ltkagsdTGAAGSYKGVKVTFNGNTI--TGATEELATTGNTGTAIVIS-----GTTTGSMVKFNEAgELQALGNND---- 150
Cdd:PRK15261  87 -------TWATEKNMNVVFTTGSGTTaaTGATDNLALMKTDGTGAISNvslaiGDAGKNNIKLGDT-YTQAIADLDgdti 158

                        170       180       190
                 ....*....|....*....|....*....|....*.
gi 490364660 151 ----NTLMYTAWAKKATNGTIAEGEFNATTNFTLAY 182
Cdd:PRK15261 159 ldekQSLNFTAWLVGAATGTVGTGEFSSAANVTISY 194
PRK15288 PRK15288
putative minor fimbrial subunit StfG; Provisional
 25-182 5.33e-07

putative minor fimbrial subunit StfG; Provisional


Pssm-ID: 185188 [Multi-domain]  Cd Length: 176  Bit Score: 47.34  E-value: 5.33e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490364660  25 SGDGTITFTGKVIDAPCGIATESANQA-IDFGQISKSLLEKDGISQVKQIPIKLVNCDltkagsdtgaAGSYKGVKVTFN 103
Cdd:PRK15288  24 SAADNLHFSGSLVASPCTLTMQGTGIAeVDFSSLDSSDFTPDGQSARKPLVFELTDCD----------SALSNGVQVTFT 93

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490364660 104 GNTITGATEELATTGNTGTAIVISGTTTGSMVKF---NEAGELQALGNNDNTLMYTAWAKKATNGTIAEGEFNATTNFTL 180
Cdd:PRK15288  94 GTEATGMRGILAIDSYSGASGIGIGIETLSGVPVgmnDEEGAIFTLVTGKNTLSLNAWVQRLPGEDLIPGRFSASALATF 173


                 ..
gi 490364660 181 AY 182
Cdd:PRK15288 174 EY 175
PRK15296 PRK15296
fimbrial protein SthA;
16-183 2.29e-06

fimbrial protein SthA;


Pssm-ID: 185196  Cd Length: 181  Bit Score: 45.85  E-value: 2.29e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490364660  16 FSATVAQAASGDGTITFTGKVIDAPCGIATE-SANQAIDFGQISKS-LLEKDGISQVKQIPIKLVNCDLTKAGSDTGAAG 93
Cdd:PRK15296  12 LTAVASTPVFAQNTITFNGKIYDQACTVQVNgSTDTTIDLGNYSKErIAEKGATTDYVPFTVSLVSCPEAGTGVPTQAMF 91

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490364660  94 SYKGVKVTFNGNTITGAtEELATTGNTGTAIVI--SGTTTGSMVKFNEAGELQALGnNDNTLMYTAWAKKATNGTIAEGE 171
Cdd:PRK15296  92 RFHGATDDSNPTYFKNA-DEGSETGAAGVGISIqnASHSDVTDNTDDAAVNLPTDG-STADFTYYAAMANDGSATVTGGD 169

                        170
                 ....*....|..
gi 490364660 172 FNATTNFTLAYE 183
Cdd:PRK15296 170 VSTQVTYTVSYQ 181
Fimbrial pfam00419
Fimbrial protein;
30-183 7.92e-06

Fimbrial protein;


Pssm-ID: 425671  Cd Length: 152  Bit Score: 43.96  E-value: 7.92e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490364660   30 ITFTGKV--IDAPCGIATESANQaIDFGQISKSLLeKDGISQVKQIPIKL-VNCDLTKAGSDTGAAGSykGVKVTFNGNT 106
Cdd:pfam00419   1 INFTGTVtrVPATCKITAGTPIE-VDFGQIPVNEL-NAGGEGSRQKPFSItLECSSGSSAVKVTVGLF--GTADASSPNL 76

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 490364660  107 ITGATEELATTGnTGTAIVISGTTTGSMVKFNEAGELQALGNNDNTLMYTAWAKKATNGTIAEGEFNATTNFTLAYE 183
Cdd:pfam00419  77 LLTGNGAGAATG-VGIRLYDANGGALPPNNGTSSIPVSATAAVATGITFTASLVATTGGTPTAGDFNATATIVVDYQ 152
PRK15187 PRK15187
fimbrial protein BcfA; Provisional
 10-182 3.68e-04

fimbrial protein BcfA; Provisional


Pssm-ID: 185109  Cd Length: 180  Bit Score: 39.42  E-value: 3.68e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490364660  10 AIASMAFSATVAQAASGDGTITFTGKVIDAPCGIATESANQAIDFGQISKSLLEKDGI--SQVKQIPIKLVNCDLTKAgs 87
Cdd:PRK15187  14 AFGGMLSTAQADTTTVTGGTVNFVGQVVDAACSVSADSVDQTVTLGQVRASKLTEAGMvaNQKEDFTIKLEDCDTQTS-- 91

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490364660  88 dtgaagsyKGVKVTFNGNTITGATEELATTGNTGTAIVISGTTTGSMVKFNEAGELQA-LGNNDNTLMYTAWAKKATNGT 166
Cdd:PRK15187  92 --------QNAAVIFNGQQDANQPGSLANTAGAGSATNVALQLYGPDGQALNIGESSStVTLNDGENVIPLSVDYIATGT 163

                        170
                 ....*....|....*.
gi 490364660 167 IAEGEFNATTNFTLAY 182
Cdd:PRK15187 164 ATAGNVTATATFSMVY 179
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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