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MULTISPECIES: choline BCCT transporter BetT [Proteus]
Protein Classification
BCCT family transporter ( domain architecture ID 2807 )
BCCT (betaine-carnitine-choline transporter) family transporter shares the common functional feature of transporting molecules with a quaternary ammonium group [R-N+(CH3)3]; energized by pmf-driven proton symport; similar to Escherichia coli secondary glycine betaine transporter BetU
List of domain hits
Name
Accession
Description
Interval
E-value
PRK09928 super family
cl00569 choline transport protein BetT; Provisional
6-663
0e+00
choline transport protein BetT; Provisional
PRK09928 :Pssm-ID: 469825
Cd Length: 679
Bit Score: 714.16
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490365282 6 EITP K KIRMK INP P VFYTSA I LI M L VVGFSA LF PELA N DKLGHLQENLFTNAS W F Y I LA VA L VLLS V TYLGL SRFG E IKL 85
Cdd:PRK09928 5 DLSH K REKDR INP V VFYTSA G LI L L FSLTTI LF TDFS N RWINRTLNWVSKTFG W Y Y L LA AT L YIVF V IFIAC SRFG S IKL 84
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490365282 86 GP DHAR P H FS YFA W F AMLF S AG M GI G LMFF G VAEPV MH Y LM PP T G DA QTIEAA KE AM RL T F FH W GL HA W AI YA IVALI L A 165
Cdd:PRK09928 85 GP EQSK P E FS LLS W A AMLF A AG I GI D LMFF S VAEPV TQ Y MQ PP E G AG QTIEAA RQ AM VW T L FH Y GL TG W SM YA LMGMA L G 164
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490365282 166 F FSYR HG LPLT L RSALYPI I G D RI Y GPIGH A VDI F AV M GT V FG V AT S LG F GV L Q V N A GL NH LFDIP INPTV Q VV LI VVIT 245
Cdd:PRK09928 165 Y FSYR YN LPLT I RSALYPI F G K RI N GPIGH S VDI A AV I GT I FG I AT T LG I GV V Q L N Y GL SV LFDIP ESLAA Q AA LI ALSV 244
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490365282 246 GL ATISV V SG LE KGIR F LSELN LG LA VI L L L L V IIL G P T VLI L KSF V E N T G G Y LSEIVSK T F N LY A YEP k SSD W LGG WTL 325
Cdd:PRK09928 245 II ATISV T SG VN KGIR V LSELN VL LA LG L I L F V LFM G D T SFL L NAL V L N V G D Y VNRFMGM T L N SF A FDR - PTE W MNN WTL 323
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490365282 326 LY W G WW LS WSPFVG M F I ARISRGRTIR E FV V G V L FV P AG FTLLW MTV FGN T A I Y L I KD k G AEVL A NIVQQDVSLALFEF L 405
Cdd:PRK09928 324 FF W A WW VA WSPFVG L F L ARISRGRTIR Q FV L G T L II P FT FTLLW LSI FGN S A L Y E I IH - G NAAF A EEAMAHPERGFYSL L 402
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490365282 406 NYF P FSSVLSF VA MLMVIV F F VTSADSGA M V VDTLA S --- GGD S ET P V W Q R I FW AALM G ISAITL L LAG G L SALQ TV T IA 482
Cdd:PRK09928 403 AQY P AFTFSAS VA TITGLL F Y VTSADSGA L V LGNFT S klk DIN S DA P N W L R V FW SVAI G LLTLGM L MTN G I SALQ NT T VI 482
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490365282 483 SA LPF AI V LLASIY GL I K A L R V DV Y K R D S QQMT T IAPPASRN - PIP W QR RL RNIAYF P KRSHVK R FMEE V VN P S ME M V SA 561
Cdd:PRK09928 483 MG LPF SF V IFFVMA GL Y K S L K V ED Y R R A S ANRD T APRLVGLQ d RLN W KQ RL SRVMNY P GTRYTR R MLDT V CR P A ME E V AQ 562
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490365282 562 EL SKQ G IQCYIHD --- EE ED R I G --- FE V D LG EDM NF F Y EVRLRF Y TQ P A F ALAG ltdee KDEEHK YYR A E IH L K EG G Q D 635
Cdd:PRK09928 563 EL RLR G AYVELNE lpp EE DE R L G hld LL V H LG DEQ NF V Y QIWPQR Y SV P G F TYRA ----- RSGKST YYR L E TF L L EG S Q G 637
650 660
....*....|....*....|....*...
gi 490365282 636 Y D V M GWT KEQ I I H DILDQYE K H IH FLH V 663
Cdd:PRK09928 638 N D L M DYS KEQ V I N DILDQYE R H LN FLH L 665
Name
Accession
Description
Interval
E-value
PRK09928
PRK09928 choline transport protein BetT; Provisional
6-663
0e+00
choline transport protein BetT; Provisional
Pssm-ID: 236635
Cd Length: 679
Bit Score: 714.16
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490365282 6 EITP K KIRMK INP P VFYTSA I LI M L VVGFSA LF PELA N DKLGHLQENLFTNAS W F Y I LA VA L VLLS V TYLGL SRFG E IKL 85
Cdd:PRK09928 5 DLSH K REKDR INP V VFYTSA G LI L L FSLTTI LF TDFS N RWINRTLNWVSKTFG W Y Y L LA AT L YIVF V IFIAC SRFG S IKL 84
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490365282 86 GP DHAR P H FS YFA W F AMLF S AG M GI G LMFF G VAEPV MH Y LM PP T G DA QTIEAA KE AM RL T F FH W GL HA W AI YA IVALI L A 165
Cdd:PRK09928 85 GP EQSK P E FS LLS W A AMLF A AG I GI D LMFF S VAEPV TQ Y MQ PP E G AG QTIEAA RQ AM VW T L FH Y GL TG W SM YA LMGMA L G 164
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490365282 166 F FSYR HG LPLT L RSALYPI I G D RI Y GPIGH A VDI F AV M GT V FG V AT S LG F GV L Q V N A GL NH LFDIP INPTV Q VV LI VVIT 245
Cdd:PRK09928 165 Y FSYR YN LPLT I RSALYPI F G K RI N GPIGH S VDI A AV I GT I FG I AT T LG I GV V Q L N Y GL SV LFDIP ESLAA Q AA LI ALSV 244
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490365282 246 GL ATISV V SG LE KGIR F LSELN LG LA VI L L L L V IIL G P T VLI L KSF V E N T G G Y LSEIVSK T F N LY A YEP k SSD W LGG WTL 325
Cdd:PRK09928 245 II ATISV T SG VN KGIR V LSELN VL LA LG L I L F V LFM G D T SFL L NAL V L N V G D Y VNRFMGM T L N SF A FDR - PTE W MNN WTL 323
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490365282 326 LY W G WW LS WSPFVG M F I ARISRGRTIR E FV V G V L FV P AG FTLLW MTV FGN T A I Y L I KD k G AEVL A NIVQQDVSLALFEF L 405
Cdd:PRK09928 324 FF W A WW VA WSPFVG L F L ARISRGRTIR Q FV L G T L II P FT FTLLW LSI FGN S A L Y E I IH - G NAAF A EEAMAHPERGFYSL L 402
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490365282 406 NYF P FSSVLSF VA MLMVIV F F VTSADSGA M V VDTLA S --- GGD S ET P V W Q R I FW AALM G ISAITL L LAG G L SALQ TV T IA 482
Cdd:PRK09928 403 AQY P AFTFSAS VA TITGLL F Y VTSADSGA L V LGNFT S klk DIN S DA P N W L R V FW SVAI G LLTLGM L MTN G I SALQ NT T VI 482
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490365282 483 SA LPF AI V LLASIY GL I K A L R V DV Y K R D S QQMT T IAPPASRN - PIP W QR RL RNIAYF P KRSHVK R FMEE V VN P S ME M V SA 561
Cdd:PRK09928 483 MG LPF SF V IFFVMA GL Y K S L K V ED Y R R A S ANRD T APRLVGLQ d RLN W KQ RL SRVMNY P GTRYTR R MLDT V CR P A ME E V AQ 562
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490365282 562 EL SKQ G IQCYIHD --- EE ED R I G --- FE V D LG EDM NF F Y EVRLRF Y TQ P A F ALAG ltdee KDEEHK YYR A E IH L K EG G Q D 635
Cdd:PRK09928 563 EL RLR G AYVELNE lpp EE DE R L G hld LL V H LG DEQ NF V Y QIWPQR Y SV P G F TYRA ----- RSGKST YYR L E TF L L EG S Q G 637
650 660
....*....|....*....|....*...
gi 490365282 636 Y D V M GWT KEQ I I H DILDQYE K H IH FLH V 663
Cdd:PRK09928 638 N D L M DYS KEQ V I N DILDQYE R H LN FLH L 665
BetT
COG1292 Choline-glycine betaine transporter [Cell wall/membrane/envelope biogenesis];
1-516
0e+00
Choline-glycine betaine transporter [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 440903
Cd Length: 512
Bit Score: 703.83
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490365282 1 MS QQ N eit PK K IRM KI N PPVF YT SA I LI MLV V GFSA LFPE L A NDK L GHLQENLF TN AS WFY I L A V A L VLLSVT YL GL S RF 80
Cdd:COG1292 1 MS DK N --- KE K FKK KI D PPVF IP SA L LI LAF V LWGL LFPE A A GAV L NAAFSWIT TN FG WFY L L L V L L FVVFCL YL AF S KY 77
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490365282 81 G E I K LG P D H A R P H FS Y F A WFAMLFSAGMGIGL M F F GVAEP VM H Y L M PP T G - DAQTI EAA KE AM RL TFFHWGLHAWAIYA I 159
Cdd:COG1292 78 G K I R LG G D D A K P E FS T F S WFAMLFSAGMGIGL V F W GVAEP LY H F L S PP P G v EPGSP EAA RW AM AY TFFHWGLHAWAIYA L 157
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490365282 160 V A L I LA F F S YR H GLPLT LR SALYP II GDRIYGPIG HAV DI F AV MG TVFGVATSLG F G V LQ V NAGLN H LF D IP INP TVQ VV 239
Cdd:COG1292 158 V G L A LA Y F A YR R GLPLT IS SALYP LL GDRIYGPIG KVI DI L AV FA TVFGVATSLG L G A LQ I NAGLN Y LF G IP NSL TVQ II 237
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490365282 240 L I V VIT G L A TIS V VSGL E KGI RF LS E LN LG LA VI LLL L V I I L GPT VL IL KS FV ENT G G YL SEI V SKTFNLY AY EP ks SD W 319
Cdd:COG1292 238 I I A VIT A L F TIS A VSGL D KGI KR LS N LN MV LA LL LLL F V L I V GPT LF IL NL FV QSL G D YL QNF V PMSLWTD AY GD -- TG W 315
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490365282 320 LGGWT LL YW G WW LS W S PFVG M FIARISRGRTIREFV V GVL F VP AG FT L LW MT VFG N TAI Y L IKD k G AEV LA NI V QQD V SL 399
Cdd:COG1292 316 LGGWT VF YW A WW IA W A PFVG L FIARISRGRTIREFV L GVL L VP TL FT F LW FS VFG G TAI H L ELN - G GGD LA EA V AAG V EA 394
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490365282 400 ALF EF L NYF P FSSV LS FV A MLM VI V FFVTSADSG AM V VDT L A SGGD S E T P V WQRIFW AA L M G IS A IT LLLAGGLSALQT V 479
Cdd:COG1292 395 ALF AL L EQL P LGTI LS VL A IIL VI I FFVTSADSG SL V LAM L T SGGD E E P P R WQRIFW GV L I G LV A AV LLLAGGLSALQT A 474
490 500 510
....*....|....*....|....*....|....*..
gi 490365282 480 T I AS ALPF AI VLL ASIYG L I KALR V D VYKRD S QQMTT 516
Cdd:COG1292 475 S I IT ALPF SF VLL LMCVS L V KALR E D PRRLR S AEAEA 511
BCCT
pfam02028 BCCT, betaine/carnitine/choline family transporter;
20-505
0e+00
BCCT, betaine/carnitine/choline family transporter;
Pssm-ID: 460420
Cd Length: 485
Bit Score: 634.96
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490365282 20 VF YT SA I LI MLV V GFSAL FPE LANDKLGHLQENLFT N AS WFY I L A V ALV L LSVTY L GL SR F G E I K LG P D HAR P H FS Y F A W 99
Cdd:pfam02028 1 VF AV SA G LI LAF V LLGLI FPE ALSAVVNTALDWITD N FG WFY L L L V LIF L VFALF L AF SR Y G N I R LG G D DDK P E FS T F S W 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490365282 100 FAMLF S AGMGIGL M F F GVAEP VM HYL - M PP T G DAQ T I EAA KE AM RL TFFHWGLHAWAIYA I VAL I LA F F S YR H GLPL TLR 178
Cdd:pfam02028 81 FAMLF A AGMGIGL V F W GVAEP LS HYL s P PP G G EPG T P EAA QQ AM AY TFFHWGLHAWAIYA L VAL A LA Y F A YR K GLPL LIS 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490365282 179 SALYP II GDRI Y GPIG H A V DI F A VMG TVFGVATSLG F G V LQ V NAGL NH LF D IP INP T V Q VVL I VV IT G L A TIS V VSGL E K 258
Cdd:pfam02028 161 SALYP LL GDRI D GPIG K A I DI L A IIA TVFGVATSLG L G A LQ I NAGL SY LF G IP NTL T T Q LAI I AI IT A L F TIS A VSGL D K 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490365282 259 GI RF LS E LN LG LAV I LLL L V I I L GPT VL IL KS FV ENT G G YL SEI V SKT F NLYAYEP k SSD WLGGWT LL YW G WW LS W S PFV 338
Cdd:pfam02028 241 GI KR LS N LN MY LAV A LLL F V L I A GPT LF IL NT FV QSL G D YL QNF V PMS F YTDPFGD - TGG WLGGWT IF YW A WW IA W A PFV 319
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490365282 339 GMFIARISRGRTIREF VV GVL F VP AG FT L LW MT VFG N TAIYL IKDKGAE v LA NI V QQDVSL ALF EF L NYF P FSSV LS FV A 418
Cdd:pfam02028 320 GMFIARISRGRTIREF IL GVL L VP TL FT F LW FS VFG G TAIYL ELNGPGD - LA DA V EAGPPA ALF AL L EQL P LGTI LS VL A 398
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490365282 419 M L MV I V FFVTSADSG AM V VDT L A SGGD SET P V WQR I FW AA L M G IS A IT LLLAGGL S ALQ TVT I AS ALPF AIV LL ASIYG L 498
Cdd:pfam02028 399 L L LI I I FFVTSADSG TL V IAM L S SGGD LNP P R WQR V FW GV L L G AV A AV LLLAGGL E ALQ SAS I IA ALPF SFI LL LMCIS L 478
....*..
gi 490365282 499 I KALR VD 505
Cdd:pfam02028 479 F KALR EE 485
bcct
TIGR00842 choline/carnitine/betaine transport; The Betaine/Carnitine/Choline Transporter (BCCT) Family ...
58-505
8.36e-170
choline/carnitine/betaine transport; The Betaine/Carnitine/Choline Transporter (BCCT) Family (TC 2.A.15) Proteins of the BCCT family share the common functional feature of transporting molecules with a quaternary ammonium group [R-N+(CH3)3]. The BCCT family includes transporters for carnitine, choline and glycine betaine. BCCT transporters have 12 putative TMS, and are energized by pmf-driven proton symport. Some of these permeases exhibit osmosensory and osmoregulatory properties inherent to their polypeptide chains. [Transport and binding proteins, Other]
Pssm-ID: 213565
Cd Length: 452
Bit Score: 493.02
E-value: 8.36e-170
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490365282 58 S W F YIL A V A L V L LS V T Y LGL SR F G E I K LG P D HAR P H FS YFA W F AMLF S AGMG I GLMF F GVAEP VMH YL M PP T G DAQ T IEA 137
Cdd:TIGR00842 1 G W A YIL T V T L F L GF V L Y IAF SR Y G K I R LG R D DEK P E FS TLS W L AMLF A AGMG A GLMF W GVAEP LTY YL T PP F G AGP T STT 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490365282 138 A K E - A MRL T F FHWG L H A WAIYA I V A L I LA F F SY R H GLPL T L R SAL Y P II G DRIY GPIG H A V DI F A VMG TVFGVATSLG F G 216
Cdd:TIGR00842 81 A Q E q A LAY T L FHWG I H P WAIYA L V G L A LA Y F HF R K GLPL R L S SAL V P LL G EKVN GPIG K A I DI L A LVA TVFGVATSLG L G 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490365282 217 VL Q V NAGL NH LF D IP INPTV Q VVL I VVI T G LA T ISV V SG LE KGI RF LS EL N LG LA VI LLL L V I I L GPTV LI L K SFV ENT G 296
Cdd:TIGR00842 161 AP Q I NAGL SA LF G IP DSFWL Q ALI I LCV T A LA C ISV A SG VG KGI KI LS NI N MA LA FL LLL F V L I V GPTV FL L N SFV DSI G 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490365282 297 G YL SEIVSKT F NLYAYEP K SS d W L GGWT LL YW G WW L SWSPFVGMFIARISRGRTIREF VV GVL FV P AG FT L LW MT VFGN T 376
Cdd:TIGR00842 241 N YL QNFPQMS F RTDPDDG K GG - W P GGWT VF YW A WW I SWSPFVGMFIARISRGRTIREF IF GVL LG P TA FT W LW FS VFGN S 319
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490365282 377 A IY L IKDK G AEVLANI V QQDVSL ALF EF L NYF P FSSVLSFV A MLMV I V FF V TSADS GAM V VDTLA S G G --- DS E T P V W Q R 453
Cdd:TIGR00842 320 A LL L QQNG G FINGPFV V ETNGAR ALF GL L AAL P LGTITMAL A LILI I I FF I TSADS ASL V LANTT S R G gql GE E P P K W V R 399
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 490365282 454 I FWA ALM G IS A IT LL LA - G G L S ALQT V TI AS ALPF AI V L L ASIYG LIK A L RV D 505
Cdd:TIGR00842 400 V FWA VAI G LI A LV LL FS g G S L A ALQT T TI IA ALPF SF V M L VVMFS LIK D L KQ D 452
Name
Accession
Description
Interval
E-value
PRK09928
PRK09928 choline transport protein BetT; Provisional
6-663
0e+00
choline transport protein BetT; Provisional
Pssm-ID: 236635
Cd Length: 679
Bit Score: 714.16
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490365282 6 EITP K KIRMK INP P VFYTSA I LI M L VVGFSA LF PELA N DKLGHLQENLFTNAS W F Y I LA VA L VLLS V TYLGL SRFG E IKL 85
Cdd:PRK09928 5 DLSH K REKDR INP V VFYTSA G LI L L FSLTTI LF TDFS N RWINRTLNWVSKTFG W Y Y L LA AT L YIVF V IFIAC SRFG S IKL 84
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490365282 86 GP DHAR P H FS YFA W F AMLF S AG M GI G LMFF G VAEPV MH Y LM PP T G DA QTIEAA KE AM RL T F FH W GL HA W AI YA IVALI L A 165
Cdd:PRK09928 85 GP EQSK P E FS LLS W A AMLF A AG I GI D LMFF S VAEPV TQ Y MQ PP E G AG QTIEAA RQ AM VW T L FH Y GL TG W SM YA LMGMA L G 164
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490365282 166 F FSYR HG LPLT L RSALYPI I G D RI Y GPIGH A VDI F AV M GT V FG V AT S LG F GV L Q V N A GL NH LFDIP INPTV Q VV LI VVIT 245
Cdd:PRK09928 165 Y FSYR YN LPLT I RSALYPI F G K RI N GPIGH S VDI A AV I GT I FG I AT T LG I GV V Q L N Y GL SV LFDIP ESLAA Q AA LI ALSV 244
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490365282 246 GL ATISV V SG LE KGIR F LSELN LG LA VI L L L L V IIL G P T VLI L KSF V E N T G G Y LSEIVSK T F N LY A YEP k SSD W LGG WTL 325
Cdd:PRK09928 245 II ATISV T SG VN KGIR V LSELN VL LA LG L I L F V LFM G D T SFL L NAL V L N V G D Y VNRFMGM T L N SF A FDR - PTE W MNN WTL 323
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490365282 326 LY W G WW LS WSPFVG M F I ARISRGRTIR E FV V G V L FV P AG FTLLW MTV FGN T A I Y L I KD k G AEVL A NIVQQDVSLALFEF L 405
Cdd:PRK09928 324 FF W A WW VA WSPFVG L F L ARISRGRTIR Q FV L G T L II P FT FTLLW LSI FGN S A L Y E I IH - G NAAF A EEAMAHPERGFYSL L 402
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490365282 406 NYF P FSSVLSF VA MLMVIV F F VTSADSGA M V VDTLA S --- GGD S ET P V W Q R I FW AALM G ISAITL L LAG G L SALQ TV T IA 482
Cdd:PRK09928 403 AQY P AFTFSAS VA TITGLL F Y VTSADSGA L V LGNFT S klk DIN S DA P N W L R V FW SVAI G LLTLGM L MTN G I SALQ NT T VI 482
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490365282 483 SA LPF AI V LLASIY GL I K A L R V DV Y K R D S QQMT T IAPPASRN - PIP W QR RL RNIAYF P KRSHVK R FMEE V VN P S ME M V SA 561
Cdd:PRK09928 483 MG LPF SF V IFFVMA GL Y K S L K V ED Y R R A S ANRD T APRLVGLQ d RLN W KQ RL SRVMNY P GTRYTR R MLDT V CR P A ME E V AQ 562
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490365282 562 EL SKQ G IQCYIHD --- EE ED R I G --- FE V D LG EDM NF F Y EVRLRF Y TQ P A F ALAG ltdee KDEEHK YYR A E IH L K EG G Q D 635
Cdd:PRK09928 563 EL RLR G AYVELNE lpp EE DE R L G hld LL V H LG DEQ NF V Y QIWPQR Y SV P G F TYRA ----- RSGKST YYR L E TF L L EG S Q G 637
650 660
....*....|....*....|....*...
gi 490365282 636 Y D V M GWT KEQ I I H DILDQYE K H IH FLH V 663
Cdd:PRK09928 638 N D L M DYS KEQ V I N DILDQYE R H LN FLH L 665
BetT
COG1292 Choline-glycine betaine transporter [Cell wall/membrane/envelope biogenesis];
1-516
0e+00
Choline-glycine betaine transporter [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 440903
Cd Length: 512
Bit Score: 703.83
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490365282 1 MS QQ N eit PK K IRM KI N PPVF YT SA I LI MLV V GFSA LFPE L A NDK L GHLQENLF TN AS WFY I L A V A L VLLSVT YL GL S RF 80
Cdd:COG1292 1 MS DK N --- KE K FKK KI D PPVF IP SA L LI LAF V LWGL LFPE A A GAV L NAAFSWIT TN FG WFY L L L V L L FVVFCL YL AF S KY 77
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490365282 81 G E I K LG P D H A R P H FS Y F A WFAMLFSAGMGIGL M F F GVAEP VM H Y L M PP T G - DAQTI EAA KE AM RL TFFHWGLHAWAIYA I 159
Cdd:COG1292 78 G K I R LG G D D A K P E FS T F S WFAMLFSAGMGIGL V F W GVAEP LY H F L S PP P G v EPGSP EAA RW AM AY TFFHWGLHAWAIYA L 157
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490365282 160 V A L I LA F F S YR H GLPLT LR SALYP II GDRIYGPIG HAV DI F AV MG TVFGVATSLG F G V LQ V NAGLN H LF D IP INP TVQ VV 239
Cdd:COG1292 158 V G L A LA Y F A YR R GLPLT IS SALYP LL GDRIYGPIG KVI DI L AV FA TVFGVATSLG L G A LQ I NAGLN Y LF G IP NSL TVQ II 237
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490365282 240 L I V VIT G L A TIS V VSGL E KGI RF LS E LN LG LA VI LLL L V I I L GPT VL IL KS FV ENT G G YL SEI V SKTFNLY AY EP ks SD W 319
Cdd:COG1292 238 I I A VIT A L F TIS A VSGL D KGI KR LS N LN MV LA LL LLL F V L I V GPT LF IL NL FV QSL G D YL QNF V PMSLWTD AY GD -- TG W 315
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490365282 320 LGGWT LL YW G WW LS W S PFVG M FIARISRGRTIREFV V GVL F VP AG FT L LW MT VFG N TAI Y L IKD k G AEV LA NI V QQD V SL 399
Cdd:COG1292 316 LGGWT VF YW A WW IA W A PFVG L FIARISRGRTIREFV L GVL L VP TL FT F LW FS VFG G TAI H L ELN - G GGD LA EA V AAG V EA 394
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490365282 400 ALF EF L NYF P FSSV LS FV A MLM VI V FFVTSADSG AM V VDT L A SGGD S E T P V WQRIFW AA L M G IS A IT LLLAGGLSALQT V 479
Cdd:COG1292 395 ALF AL L EQL P LGTI LS VL A IIL VI I FFVTSADSG SL V LAM L T SGGD E E P P R WQRIFW GV L I G LV A AV LLLAGGLSALQT A 474
490 500 510
....*....|....*....|....*....|....*..
gi 490365282 480 T I AS ALPF AI VLL ASIYG L I KALR V D VYKRD S QQMTT 516
Cdd:COG1292 475 S I IT ALPF SF VLL LMCVS L V KALR E D PRRLR S AEAEA 511
BCCT
pfam02028 BCCT, betaine/carnitine/choline family transporter;
20-505
0e+00
BCCT, betaine/carnitine/choline family transporter;
Pssm-ID: 460420
Cd Length: 485
Bit Score: 634.96
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490365282 20 VF YT SA I LI MLV V GFSAL FPE LANDKLGHLQENLFT N AS WFY I L A V ALV L LSVTY L GL SR F G E I K LG P D HAR P H FS Y F A W 99
Cdd:pfam02028 1 VF AV SA G LI LAF V LLGLI FPE ALSAVVNTALDWITD N FG WFY L L L V LIF L VFALF L AF SR Y G N I R LG G D DDK P E FS T F S W 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490365282 100 FAMLF S AGMGIGL M F F GVAEP VM HYL - M PP T G DAQ T I EAA KE AM RL TFFHWGLHAWAIYA I VAL I LA F F S YR H GLPL TLR 178
Cdd:pfam02028 81 FAMLF A AGMGIGL V F W GVAEP LS HYL s P PP G G EPG T P EAA QQ AM AY TFFHWGLHAWAIYA L VAL A LA Y F A YR K GLPL LIS 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490365282 179 SALYP II GDRI Y GPIG H A V DI F A VMG TVFGVATSLG F G V LQ V NAGL NH LF D IP INP T V Q VVL I VV IT G L A TIS V VSGL E K 258
Cdd:pfam02028 161 SALYP LL GDRI D GPIG K A I DI L A IIA TVFGVATSLG L G A LQ I NAGL SY LF G IP NTL T T Q LAI I AI IT A L F TIS A VSGL D K 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490365282 259 GI RF LS E LN LG LAV I LLL L V I I L GPT VL IL KS FV ENT G G YL SEI V SKT F NLYAYEP k SSD WLGGWT LL YW G WW LS W S PFV 338
Cdd:pfam02028 241 GI KR LS N LN MY LAV A LLL F V L I A GPT LF IL NT FV QSL G D YL QNF V PMS F YTDPFGD - TGG WLGGWT IF YW A WW IA W A PFV 319
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490365282 339 GMFIARISRGRTIREF VV GVL F VP AG FT L LW MT VFG N TAIYL IKDKGAE v LA NI V QQDVSL ALF EF L NYF P FSSV LS FV A 418
Cdd:pfam02028 320 GMFIARISRGRTIREF IL GVL L VP TL FT F LW FS VFG G TAIYL ELNGPGD - LA DA V EAGPPA ALF AL L EQL P LGTI LS VL A 398
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490365282 419 M L MV I V FFVTSADSG AM V VDT L A SGGD SET P V WQR I FW AA L M G IS A IT LLLAGGL S ALQ TVT I AS ALPF AIV LL ASIYG L 498
Cdd:pfam02028 399 L L LI I I FFVTSADSG TL V IAM L S SGGD LNP P R WQR V FW GV L L G AV A AV LLLAGGL E ALQ SAS I IA ALPF SFI LL LMCIS L 478
....*..
gi 490365282 499 I KALR VD 505
Cdd:pfam02028 479 F KALR EE 485
bcct
TIGR00842 choline/carnitine/betaine transport; The Betaine/Carnitine/Choline Transporter (BCCT) Family ...
58-505
8.36e-170
choline/carnitine/betaine transport; The Betaine/Carnitine/Choline Transporter (BCCT) Family (TC 2.A.15) Proteins of the BCCT family share the common functional feature of transporting molecules with a quaternary ammonium group [R-N+(CH3)3]. The BCCT family includes transporters for carnitine, choline and glycine betaine. BCCT transporters have 12 putative TMS, and are energized by pmf-driven proton symport. Some of these permeases exhibit osmosensory and osmoregulatory properties inherent to their polypeptide chains. [Transport and binding proteins, Other]
Pssm-ID: 213565
Cd Length: 452
Bit Score: 493.02
E-value: 8.36e-170
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490365282 58 S W F YIL A V A L V L LS V T Y LGL SR F G E I K LG P D HAR P H FS YFA W F AMLF S AGMG I GLMF F GVAEP VMH YL M PP T G DAQ T IEA 137
Cdd:TIGR00842 1 G W A YIL T V T L F L GF V L Y IAF SR Y G K I R LG R D DEK P E FS TLS W L AMLF A AGMG A GLMF W GVAEP LTY YL T PP F G AGP T STT 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490365282 138 A K E - A MRL T F FHWG L H A WAIYA I V A L I LA F F SY R H GLPL T L R SAL Y P II G DRIY GPIG H A V DI F A VMG TVFGVATSLG F G 216
Cdd:TIGR00842 81 A Q E q A LAY T L FHWG I H P WAIYA L V G L A LA Y F HF R K GLPL R L S SAL V P LL G EKVN GPIG K A I DI L A LVA TVFGVATSLG L G 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490365282 217 VL Q V NAGL NH LF D IP INPTV Q VVL I VVI T G LA T ISV V SG LE KGI RF LS EL N LG LA VI LLL L V I I L GPTV LI L K SFV ENT G 296
Cdd:TIGR00842 161 AP Q I NAGL SA LF G IP DSFWL Q ALI I LCV T A LA C ISV A SG VG KGI KI LS NI N MA LA FL LLL F V L I V GPTV FL L N SFV DSI G 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490365282 297 G YL SEIVSKT F NLYAYEP K SS d W L GGWT LL YW G WW L SWSPFVGMFIARISRGRTIREF VV GVL FV P AG FT L LW MT VFGN T 376
Cdd:TIGR00842 241 N YL QNFPQMS F RTDPDDG K GG - W P GGWT VF YW A WW I SWSPFVGMFIARISRGRTIREF IF GVL LG P TA FT W LW FS VFGN S 319
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490365282 377 A IY L IKDK G AEVLANI V QQDVSL ALF EF L NYF P FSSVLSFV A MLMV I V FF V TSADS GAM V VDTLA S G G --- DS E T P V W Q R 453
Cdd:TIGR00842 320 A LL L QQNG G FINGPFV V ETNGAR ALF GL L AAL P LGTITMAL A LILI I I FF I TSADS ASL V LANTT S R G gql GE E P P K W V R 399
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 490365282 454 I FWA ALM G IS A IT LL LA - G G L S ALQT V TI AS ALPF AI V L L ASIYG LIK A L RV D 505
Cdd:TIGR00842 400 V FWA VAI G LI A LV LL FS g G S L A ALQT T TI IA ALPF SF V M L VVMFS LIK D L KQ D 452
PRK03356
PRK03356 L-carnitine/gamma-butyrobetaine antiport BCCT transporter;
10-504
2.42e-59
L-carnitine/gamma-butyrobetaine antiport BCCT transporter;
Pssm-ID: 179568
Cd Length: 504
Bit Score: 207.66
E-value: 2.42e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490365282 10 K K IRMK I N P P VF YTSA I LIMLVVGFSALFPEL AN DKLGHLQENLFTNAS W FYILAVALV L LSVTY L GLSRFGEIK LG PD h 89
Cdd:PRK03356 4 E K KKTG I E P K VF FPPL I IVGILCWLTVRDLDA AN VVINAVFSYVTNVWG W AFEWYMVVM L FGWFW L VFGPYAKKR LG DE - 82
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490365282 90 a R P H FS YFA W FA M L F SAGMGIGLM F F G VA E PVMHYLM PP T G - DAQTIE A AKEAMRLTF FHWG LHA WA I Y AIVALILAF F S 168
Cdd:PRK03356 83 - K P E FS TAS W IF M M F ASCTSAAVL F W G SI E IYYYIST PP F G l EPNSTG A KELGLAYSL FHWG PLP WA T Y SFLSVAFGY F F 161
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490365282 169 YRHGLPLTLR S - A L Y P II G DR - IY G PI G HA VD I F AVMGTV F GVA TSLG FGVLQ V NAGLNH LF D IP INPTVQVVL I VVITG 246
Cdd:PRK03356 162 FVRKMDVIRP S s T L V P LV G EK h AK G LF G TI VD N F YLVALI F AMG TSLG LATPL V TECMQW LF G IP HTLQLDAII I TCWII 241
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490365282 247 L AT I S V VS GL E KG I R FL S ELNLG L AVIL L LL V I I L G P T VL I LKS F VENT G GY L SEIVSKT F NLYAY ep KSSDWLG GWT LL 326
Cdd:PRK03356 242 L NA I C V AC GL Q KG V R IA S DVRSY L SFLM L GW V F I V G G T SF I MNY F TDSV G ML L MYLPRML F YTDPI -- GKGGFPQ GWT VF 319
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490365282 327 YW G WW LSWSPFVGM F I ARISRGRT I RE FVV G VLFVPAGF T LLWM TV F G NTAIY L IKDKGAEVLAN I V Q QD V SL A LF E FLN 406
Cdd:PRK03356 320 YW A WW VIYAIQMSI F L ARISRGRT V RE LCF G MVLGLTAS T WILW TV L G SNTLL L MDKNIINIPNL I E Q YG V AR A II E TWA 399
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490365282 407 YF P F S SVLSFVAMLMVIVFF VT SADSG ---- AM VVDTLASG G D s E T P VWQ RI F W AA L M GI SA I T LL LA GGL SAL QT VT IA 482
Cdd:PRK03356 400 AL P L S TATMWGFFILCFIAT VT LINAC sytl AM STCREVRD G E - E P P LLV RI G W SI L V GI IG I V LL AL GGL KPI QT AI IA 478
490 500
....*....|....*....|..
gi 490365282 483 SAL P FAI V LLASIYGL IK ALRV 504
Cdd:PRK03356 479 GGC P LFF V NIMVTLSF IK DAKQ 500
PRK09950
PRK09950 putative transporter; Provisional
15-505
6.41e-56
putative transporter; Provisional
Pssm-ID: 236636
Cd Length: 506
Bit Score: 198.47
E-value: 6.41e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490365282 15 K INP P VFY TS AILIMLV V GFSA LFP ELANDKLGHLQENLFTNASWFYI L A V A L VLLS V T YL GL S RF G E I K LG pd HAR P HF 94
Cdd:PRK09950 7 K KDK P LIS TS LLAVFFI V AALS LFP QQSAAAANTIFQWVTRTFGSPVQ L F V L L AMIL V L YL AT S KY G N I R LG -- EGK P EY 84
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490365282 95 S YFA W FA M LFS AG M G IGLMFF GV A E PVMH Y LM P PTGD A - QTIE A AKEAMRLT FFHWG LH AWA I YA IVA LI L A F - F SY R HG 172
Cdd:PRK09950 85 S TLS W LF M FIC AG L G SSTLYW GV M E WAYY Y QT P GLNI A p RSPK A LEYSVSYS FFHWG IS AWA T YA LAS LI M A Y h F HV R KN 164
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490365282 173 LP L T L RSALYP I I G DRIY GP I G HA VD IFAVMG TV FGVAT SL GFGVLQVNA GL NH L FDI P I N P TVQ VVL I VVITGLATI S V 252
Cdd:PRK09950 165 KG L S L SGIIAA I T G VKPQ GP W G RL VD LMFLIA TV GALTI SL VVTAATFTR GL SA L TGL P N N F TVQ AFV I LLSGVIFCL S S 244
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490365282 253 VS G LEK G IRF LS ELNLGL A VILL LLV I I L GPT VL I LKSFVENT G GYLSEIVS kt FN L YAYEPKSSDWLGG WT LL YW G WW L 332
Cdd:PRK09950 245 YI G IDN G LQR LS KMVGWG A FLFA LLV L I V GPT EF I TNNIINSI G LTTQNFLQ -- MS L FTDPMGDGSFTRN WT VF YW L WW I 322
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490365282 333 S WS P F V G MF IA R I SRGR T I R E FVV G VLFVPAGFTLLWMT V FGNT AI YLIKDKGAE V LANIVQQDVSL A LFEF L NYF P FSS 412
Cdd:PRK09950 323 S YT P G V A MF VT R V SRGR K I K E VIW G LILGSSVGCWFFFG V LESY AI HQFINGVIN V PQILNTLGGET A VQQL L SSL P AGK 402
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490365282 413 VLSFVAMLMV I V F FVTSA D SG A MVVDTLA ---- SG GD SETPV w Q R I FW AALMGISAITL L LA G GLS - ALQ T VTIAS ALPF 487
Cdd:PRK09950 403 LFLAAYLGIM I I F LASHM D AV A YTMAATS trnl RE GD DPDRG - L R L FW CVVITLIPLSI L FT G ASL d TMK T TVVLT ALPF 481
490
....*....|....*...
gi 490365282 488 AIV LL ASI YG L I KA L RV D 505
Cdd:PRK09950 482 LVI LL IKV YG F I RW L KQ D 499
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.21
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
