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Conserved domains on  [gi|490366554|ref|WP_004246218|]
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MULTISPECIES: type 1 fimbrial major subunit FimA [Proteus]

Protein Classification

fimbrial protein( domain architecture ID 646)

fimbrial protein similar to the type-1 fimbrial major subunit FimA, which is transported to the outer membrane by the lipoprotein sorting system, and a mature or processed FimA protein on the outer membrane is autopolymerized to form Fim fimbriae

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Fimbrial super family cl01416
Fimbrial protein;
1-188 3.08e-52

Fimbrial protein;


The actual alignment was detected with superfamily member PRK15194:

Pssm-ID: 445401  Cd Length: 185  Bit Score: 165.51  E-value: 3.08e-52
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490366554   1 MKLNYLKLFVISALSVGSvfAVSAEDPVgngPVTVNGGEIFFKGELVNAACAVDSSSDGQIVKLGQVRTAKLAKAGDFSE 80
Cdd:PRK15194   1 MKLRFISSAIASLLFVAG--AAYAADPT---PVSVDGGTIHFEGELVNAACSVNTDSADQTVTLGQYRTAIFTAVGNTTA 75

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490366554  81 NTNFTIQLNDCDSKVASTAKVAFTGVSAAGQDDVLAVSSSSAGG-AKNVGIQILDSKSAPMSFDGAGFGNATKLHDGKNI 159
Cdd:PRK15194  76 LIPFTIQLNDCDPVVAATAAVAFSGQADATNDNLLAVASSTNTTtATGVGIEILDNTSSILKPDGATFSANQNLIEGTNT 155

                        170       180       190
                 ....*....|....*....|....*....|
gi 490366554 160 IPFQARYYALGA-TEPGIANANATFAVQYE 188
Cdd:PRK15194 156 LHFSARYKATGTsASAGQANADATFIMKYE 185
 
Name Accession Description Interval E-value
PRK15194 PRK15194
type 1 fimbrial protein subunit FimA;
1-188 3.08e-52

type 1 fimbrial protein subunit FimA;


Pssm-ID: 237920  Cd Length: 185  Bit Score: 165.51  E-value: 3.08e-52
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490366554   1 MKLNYLKLFVISALSVGSvfAVSAEDPVgngPVTVNGGEIFFKGELVNAACAVDSSSDGQIVKLGQVRTAKLAKAGDFSE 80
Cdd:PRK15194   1 MKLRFISSAIASLLFVAG--AAYAADPT---PVSVDGGTIHFEGELVNAACSVNTDSADQTVTLGQYRTAIFTAVGNTTA 75

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490366554  81 NTNFTIQLNDCDSKVASTAKVAFTGVSAAGQDDVLAVSSSSAGG-AKNVGIQILDSKSAPMSFDGAGFGNATKLHDGKNI 159
Cdd:PRK15194  76 LIPFTIQLNDCDPVVAATAAVAFSGQADATNDNLLAVASSTNTTtATGVGIEILDNTSSILKPDGATFSANQNLIEGTNT 155

                        170       180       190
                 ....*....|....*....|....*....|
gi 490366554 160 IPFQARYYALGA-TEPGIANANATFAVQYE 188
Cdd:PRK15194 156 LHFSARYKATGTsASAGQANADATFIMKYE 185
FimA COG3539
Pilin (type 1 fimbrial protein) [Cell motility];
18-188 1.45e-38

Pilin (type 1 fimbrial protein) [Cell motility];


Pssm-ID: 442760 [Multi-domain]  Cd Length: 172  Bit Score: 130.16  E-value: 1.45e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490366554  18 SVFAVSAEDPVGNGPVTVNGGEIFFKGELVNAACAVDSSSDGQIVKLGQVRTAKLAKAGDFSENTNFTIQLNDCDSKVAS 97
Cdd:COG3539    4 LLLALLLALALSAAAAAAADGTVNFTGTVVAPTCTINTGSKDQTVDLGTVSTSDLNGVGSTSGPKPFSIKLTNCDAGTSN 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490366554  98 TAKVAFTGVSAAGQDDVLAVSSSsaGGAKNVGIQILDSKSAPMSFDGAGFGNATKLhDGKNIIPFQARYYALGAT-EPGI 176
Cdd:COG3539   84 SVKVTFTGTADSANPGLLANTGS--GGASGVGIQLLDSDGTPIPLGTPSSAVTLTS-NGSATLPFYARYVATGATvTAGS 160

                        170
                 ....*....|..
gi 490366554 177 ANANATFAVQYE 188
Cdd:COG3539  161 FNATATFTIDYQ 172
Fimbrial pfam00419
Fimbrial protein;
40-188 1.87e-16

Fimbrial protein;


Pssm-ID: 425671  Cd Length: 152  Bit Score: 72.47  E-value: 1.87e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490366554   40 IFFKGEL--VNAACAVDSSsDGQIVKLGQVRTAKLAKAGDFSENTNFTIQLNdCDSK-VASTAKVAFTGvSAAGQDDVLA 116
Cdd:pfam00419   1 INFTGTVtrVPATCKITAG-TPIEVDFGQIPVNELNAGGEGSRQKPFSITLE-CSSGsSAVKVTVGLFG-TADASSPNLL 77

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 490366554  117 VSSSSAGGAKNVGIQILDSKSAPMSFdGAGFGNATKLHDG--KNIIPFQARYYAL--GATEPGIANANATFAVQYE 188
Cdd:pfam00419  78 LTGNGAGAATGVGIRLYDANGGALPP-NNGTSSIPVSATAavATGITFTASLVATtgGTPTAGDFNATATIVVDYQ 152
 
Name Accession Description Interval E-value
PRK15194 PRK15194
type 1 fimbrial protein subunit FimA;
1-188 3.08e-52

type 1 fimbrial protein subunit FimA;


Pssm-ID: 237920  Cd Length: 185  Bit Score: 165.51  E-value: 3.08e-52
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490366554   1 MKLNYLKLFVISALSVGSvfAVSAEDPVgngPVTVNGGEIFFKGELVNAACAVDSSSDGQIVKLGQVRTAKLAKAGDFSE 80
Cdd:PRK15194   1 MKLRFISSAIASLLFVAG--AAYAADPT---PVSVDGGTIHFEGELVNAACSVNTDSADQTVTLGQYRTAIFTAVGNTTA 75

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490366554  81 NTNFTIQLNDCDSKVASTAKVAFTGVSAAGQDDVLAVSSSSAGG-AKNVGIQILDSKSAPMSFDGAGFGNATKLHDGKNI 159
Cdd:PRK15194  76 LIPFTIQLNDCDPVVAATAAVAFSGQADATNDNLLAVASSTNTTtATGVGIEILDNTSSILKPDGATFSANQNLIEGTNT 155

                        170       180       190
                 ....*....|....*....|....*....|
gi 490366554 160 IPFQARYYALGA-TEPGIANANATFAVQYE 188
Cdd:PRK15194 156 LHFSARYKATGTsASAGQANADATFIMKYE 185
FimA COG3539
Pilin (type 1 fimbrial protein) [Cell motility];
18-188 1.45e-38

Pilin (type 1 fimbrial protein) [Cell motility];


Pssm-ID: 442760 [Multi-domain]  Cd Length: 172  Bit Score: 130.16  E-value: 1.45e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490366554  18 SVFAVSAEDPVGNGPVTVNGGEIFFKGELVNAACAVDSSSDGQIVKLGQVRTAKLAKAGDFSENTNFTIQLNDCDSKVAS 97
Cdd:COG3539    4 LLLALLLALALSAAAAAAADGTVNFTGTVVAPTCTINTGSKDQTVDLGTVSTSDLNGVGSTSGPKPFSIKLTNCDAGTSN 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490366554  98 TAKVAFTGVSAAGQDDVLAVSSSsaGGAKNVGIQILDSKSAPMSFDGAGFGNATKLhDGKNIIPFQARYYALGAT-EPGI 176
Cdd:COG3539   84 SVKVTFTGTADSANPGLLANTGS--GGASGVGIQLLDSDGTPIPLGTPSSAVTLTS-NGSATLPFYARYVATGATvTAGS 160

                        170
                 ....*....|..
gi 490366554 177 ANANATFAVQYE 188
Cdd:COG3539  161 FNATATFTIDYQ 172
PRK15209 PRK15209
long polar fimbrial protein LpfA; Provisional
 8-188 2.39e-23

long polar fimbrial protein LpfA; Provisional


Pssm-ID: 185131 [Multi-domain]  Cd Length: 174  Bit Score: 91.19  E-value: 2.39e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490366554   8 LFVISALSV--GSVFAVSAEDpvgngpvtvngGEIFFKGELVNAACAVDSSSDGQIVKLGQVRTAKLAKAGDFSENTNFT 85
Cdd:PRK15209   5 VFALSALALtsTSVFAAESGD-----------GTVKFTGEIVDAPCVVSTDSQNQEVVLGQVKKSVFKAIGDKSSAKPFQ 73

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490366554  86 IQLNDCDSKVASTAKVAFTGVSAAGQDDVLAVsSSSAGGAKNVGIQILDSKSAPMSFDGAGFgnATKLHDGKNIIPFQAR 165
Cdd:PRK15209  74 IKLEDCDITTNKKVNVSFNGVGDADDSTLVSV-STEAGAATGVGIGIYDNANTLVELNTGKS--TTTLAAGQTVLYFTAN 150

                        170       180
                 ....*....|....*....|....
gi 490366554 166 YYA-LGATEPGIANANATFAVQYE 188
Cdd:PRK15209 151 YVStKDTVTTGYGNAEVDFNLSYE 174
PRK15187 PRK15187
fimbrial protein BcfA; Provisional
 9-187 7.57e-21

fimbrial protein BcfA; Provisional


Pssm-ID: 185109  Cd Length: 180  Bit Score: 84.87  E-value: 7.57e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490366554   9 FVISALSVGSVFAVSAEDPVgngpvTVNGGEIFFKGELVNAACAVDSSSDGQIVKLGQVRTAKLAKAGDFS-ENTNFTIQ 87
Cdd:PRK15187   8 LMVSAIAFGGMLSTAQADTT-----TVTGGTVNFVGQVVDAACSVSADSVDQTVTLGQVRASKLTEAGMVAnQKEDFTIK 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490366554  88 LNDCDSKVASTAKVAFTGVSAAGQDDVLAvSSSSAGGAKNVGIQILDSKSAPMSFDGAgfGNATKLHDGKNIIPFQARYY 167
Cdd:PRK15187  83 LEDCDTQTSQNAAVIFNGQQDANQPGSLA-NTAGAGSATNVALQLYGPDGQALNIGES--SSTVTLNDGENVIPLSVDYI 159

                        170       180
                 ....*....|....*....|
gi 490366554 168 ALGATEPGIANANATFAVQY 187
Cdd:PRK15187 160 ATGTATAGNVTATATFSMVY 179
PRK15210 PRK15210
fimbrial protein;
18-187 9.50e-18

fimbrial protein;


Pssm-ID: 185132  Cd Length: 194  Bit Score: 77.05  E-value: 9.50e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490366554  18 SVFAVsaEDPVGNGPVtvNGGEIFFKGELVNAACAVDSSSDGQIVKLGQVRTAKLAKAGDFSENTNFTIQLNDC-----D 92
Cdd:PRK15210  19 SVFAA--DTTPTAGPF--GSGKILFTGTITNSPCDIAPGDDAITVPFGQISYRKLNTADATTESKPFTIHLQNCafdpnI 94

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490366554  93 SKVASTA-KVAFTGVSAAGQDDVLAVSSSSAGGAKNVGIQILDSKSAPMSFDGAGF--GNATKLHDGKNIIPFQARYYAL 169
Cdd:PRK15210  95 PDTAGSAgKMSKVTVSFSGTANTSKKAYTTSGSAQHVGVQLLKSDNTSIIEPNTPMpdGDAQQLQAGNNELNFFARLIAL 174

                        170
                 ....*....|....*....
gi 490366554 170 -GATEPGIANANATFAVQY 187
Cdd:PRK15210 175 dNGVTPGDFNASVTYTLKY 193
PRK15200 PRK15200
type 1 fimbrial protein subunit FimI;
27-187 1.66e-17

type 1 fimbrial protein subunit FimI;


Pssm-ID: 185122  Cd Length: 177  Bit Score: 76.05  E-value: 1.66e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490366554  27 PVGNGPVTVNGGEIFFKGELVNAACAVDSSSDGQIVKLGQVRTAKLAKAGDFSE-NTNFTIQLNDCDSKVASTAKVAFTG 105
Cdd:PRK15200  16 PVIAQPVMVESGRVHLRGQLVNGGCAVATESQDLRVLMGQYRTNAFTGPGSFAPvSVPFSLRLISCSAEVWRHVGIAFAG 95

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490366554 106 VSAAGQDDVLAVSSSSAGGAkNVGIQILDSKSAPMsfdgagFGNATKLH-----DGKNIIPFQARYYALGAT-EPGIANA 179
Cdd:PRK15200  96 VTPAEDPHVFLASGEGIGNA-GIGLALFDDQQRQI------IPNTLPLHyapilTSEMTLHFTARYRAISENmTPGRIHS 168


                 ....*...
gi 490366554 180 NATFAVQY 187
Cdd:PRK15200 169 EVWFTLVY 176
Fimbrial pfam00419
Fimbrial protein;
40-188 1.87e-16

Fimbrial protein;


Pssm-ID: 425671  Cd Length: 152  Bit Score: 72.47  E-value: 1.87e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490366554   40 IFFKGEL--VNAACAVDSSsDGQIVKLGQVRTAKLAKAGDFSENTNFTIQLNdCDSK-VASTAKVAFTGvSAAGQDDVLA 116
Cdd:pfam00419   1 INFTGTVtrVPATCKITAG-TPIEVDFGQIPVNELNAGGEGSRQKPFSITLE-CSSGsSAVKVTVGLFG-TADASSPNLL 77

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 490366554  117 VSSSSAGGAKNVGIQILDSKSAPMSFdGAGFGNATKLHDG--KNIIPFQARYYAL--GATEPGIANANATFAVQYE 188
Cdd:pfam00419  78 LTGNGAGAATGVGIRLYDANGGALPP-NNGTSSIPVSATAavATGITFTASLVATtgGTPTAGDFNATATIVVDYQ 152
lpfA PRK15289
fimbrial protein; Provisional
 1-188 1.06e-13

fimbrial protein; Provisional


Pssm-ID: 185189  Cd Length: 190  Bit Score: 66.14  E-value: 1.06e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490366554   1 MKLNylklFVISALSVGSVFAVsaedpvgnGPVTVNGGEIFFKGELVNAACAVDSSSDGQIVKLGQVRTAKLAKAGDFSE 80
Cdd:PRK15289   1 MKRN----IIGGAFTLASLMLA--------GHALAEDGVVHFVGEIVDTTCEVTSDTADQIVPLGKVSKNAFSGVGSLAS 68

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490366554  81 NTNFTIQLNDCDSKVASTAkVAFTGVSAAGQDDVLAVSSSSAGG-------------AKNVGIQIL---DSKSAPMSFDG 144
Cdd:PRK15289  69 PQKFSIKLENCPATYTQAA-VRFDGTEAPGGDGDLKVGTPLTAGnpgdftgtgqaiaATGVGIRIFnqsDNSQVKLYNDS 147

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*
gi 490366554 145 AgfgNATKLHDGKNIIPFQARYYALGAT-EPGIANANATFAVQYE 188
Cdd:PRK15289 148 A---YTAIDAEGKAEMKFIARYVATNATvTAGTANADSQFTVEYK 189
PRK15300 PRK15300
fimbrial protein StiA; Provisional
 34-187 4.19e-13

fimbrial protein StiA; Provisional


Pssm-ID: 185200  Cd Length: 179  Bit Score: 64.35  E-value: 4.19e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490366554  34 TVNGGEIFFKGELVNAACAVdsSSDGQIVKLGQVRTAKLAKAGDFSENTNFTIQLNDCDSKVASTAKVAFTGVsaagQDD 113
Cdd:PRK15300  25 TAKDGTVHITGLIKQNACTV--KTDSVEVTLQEEFASLFTAAGQTAGDTDFTIELENCDANVYSSVQARFEGT----LDG 98

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490366554 114 VLAVSSSSAGGAKNVGIQILDSKSAPMSF-DGAGFGNATKLHDGKNI----IPFQARYYALGA-TEPGIANANATFAVQY 187
Cdd:PRK15300  99 TDATILKNEDDAENIGVQILDKTSTPMTFnDLQAWSAAVALPTAEGVtelsMPFTARYIATAVpVKSGTVDATATFYLQY 178
PRK09934 PRK09934
fimbriae assembly protein;
8-187 2.89e-12

fimbriae assembly protein;


Pssm-ID: 182153 [Multi-domain]  Cd Length: 171  Bit Score: 61.83  E-value: 2.89e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490366554   8 LFVISALSVGSVFAVSAeDPVGngpvTVNggeIFFKGELVNAACAVDSSSDGQIVKLGQVRTAKLAKAGDFSENTNFTIQ 87
Cdd:PRK09934   5 FFACFCGLLWSPLSWAA-DPLG----EIN---IELHGNVVDFTCTVNTADSDKTVDLGTWPTKQLLNAGDTTQPVPFSLK 76

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490366554  88 LNDCDSKVAStakVAFTGVSAAGQdDVLAVSSSSAggAKNVGIQILDSK---------SAPMSFDGAgfGNATklhdgkn 158
Cdd:PRK09934  77 LEGCPPGSAS---ITFTGTPASDT-NLLALDDPAM--AQTVAIEIRDSDrsrlalgqaSPTVEVDAN--GNAT------- 141

                        170       180       190
                 ....*....|....*....|....*....|
gi 490366554 159 iIPFQARYYALG-ATEPGIANANATFAVQY 187
Cdd:PRK09934 142 -LNFYANYIALAdGVQPGVAKADATFMINY 170
PRK09733 PRK09733
fimbrial-like protein;
38-188 6.04e-12

fimbrial-like protein;


Pssm-ID: 182053  Cd Length: 181  Bit Score: 61.12  E-value: 6.04e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490366554  38 GEIFFKGELVNAACAVDSSSDGQIVKLGQVRTAKLaKAGDFSENTNFTIQLNDC----DSKVASTAKVAFTGVSA-AGQD 112
Cdd:PRK09733  26 GIVKFKGEVISAPCSIKPGDEDLTVNLGEVADTVL-KSDQKSLAEPFTIHLQDCmlsqGGTTYSKAKVTFTTANTmTGQS 104

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490366554 113 DVLAVS-SSSAGGAKNVGIQILDSKSAPMSFDGA---GFGNATKLHDgkniIPFQARYYALGAT-EPGIANANATFAVQY 187
Cdd:PRK09733 105 DLLKNTkETEIGGATGVGVRILDSQSGEVTLGTPvviTFNNTNSYQE----LNFKARMESPSKDaTPGNVYAQADYKIAY 180


                 .
gi 490366554 188 E 188
Cdd:PRK09733 181 E 181
PRK15205 PRK15205
long polar fimbrial protein LpfE; Provisional
 11-188 1.12e-10

long polar fimbrial protein LpfE; Provisional


Pssm-ID: 237923  Cd Length: 176  Bit Score: 57.55  E-value: 1.12e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490366554  11 ISALSVGSVFAVSAEDPVGNGPvtvnGGEIFFKGELVNAACAVDSSSDGqiVKLGQVRTAKLAKAGDFSENTNFTIQLND 90
Cdd:PRK15205   7 LLPLALLLLTASGMAAPTDLGP----AGDIHFTITIKAKACELEKDSLE--VDMGTMVLQKPVKVGTELNQKNFSIGLKD 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490366554  91 CDSkvASTAKVAFTGVSAAGQDDVLAVsssSAGGAKNVGIQILDSKSA---PMSFDGAGFGNATKlHDGKNIIPFQARYY 167
Cdd:PRK15205  81 CDG--ISKASVTMDGSPDPDDPSLFAL---DAGGATGVALKIKTSKGTqqyPKSTDGTPVEWAIN-GDGTTQLNYIASYV 154

                        170       180
                 ....*....|....*....|..
gi 490366554 168 ALGATEP-GIANANATFAVQYE 188
Cdd:PRK15205 155 PVNADATvGTANATVNFSVTYE 176
PRK15190 PRK15190
fimbrial protein BcfE; Provisional
 42-188 6.73e-10

fimbrial protein BcfE; Provisional


Pssm-ID: 185112  Cd Length: 181  Bit Score: 55.47  E-value: 6.73e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490366554  42 FKGELVNAACAVDSSSDGQIVKLGQVRTAKLAKAGDFSENTNFTIQLNDCDSKVAStAKVAFTGVSAAGQDDVLAVSSSS 121
Cdd:PRK15190  32 FTGTIVAQTCDIDISSLSQSIDLGQFAVGDFPSTGTTTKFKPFNINLKNCSRGIAG-AKIWFTGEPDPDNPALLAITDTG 110

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 490366554 122 AGG----AKNVGIQILDSKSAPMSFDGAGfGNATKLHDGKNIIPFQARYyalGATEPGIANANAT----FAVQYE 188
Cdd:PRK15190 111 MGSgnmlASGVGVEILNDDQDTISINNAD-SVVYPLKAGRNTLSFYIRY---KSTRPTVTSGNATavmyFDMQYE 181
PRK15191 PRK15191
fimbrial protein BcfF; Provisional
 33-188 9.02e-09

fimbrial protein BcfF; Provisional


Pssm-ID: 185113 [Multi-domain]  Cd Length: 172  Bit Score: 52.41  E-value: 9.02e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490366554  33 VTVNGGEIFFKGELVNAACAVDSSSDGQIVKLGQVRTAKLAKAGDFSENTNFTIQLNDCDSkVASTAKVAFTGVSAAGQD 112
Cdd:PRK15191  18 VQAHDGRVYVSGTITDNTCSLSPGSENINVAMGAVSQRQFYRAGDGSAWQPFAIDLQNCGS-TASGVTVSFSGAADSRNT 96

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 490366554 113 DVLAVSSSSAgGAKNVGIQILDSKSAPMSFDGAGFGNATKLHDGKNIIPFQARYYALGAT-EPGIANANATFAVQYE 188
Cdd:PRK15191  97 DLLALTAGES-DASGIGIALYDQNKTLIPLGQESDVVTLSPGQASAHLQFYARYLADGGAvTPGDANASATFILAYE 172
PRK15260 PRK15260
fimbrial protein SteF; Provisional
 40-188 5.23e-07

fimbrial protein SteF; Provisional


Pssm-ID: 185168  Cd Length: 178  Bit Score: 47.77  E-value: 5.23e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490366554  40 IFFKGELVNAACAVDSSSDGQ-IVKLGQVRTAKLAKAGDfSENTNFTIQLNDCDSKVASTAKVAFTGVSAAGQDDVLAVS 118
Cdd:PRK15260  31 VHYSGKLVAGACNLVVDNDTMaTVDFHTIGSDNFDASGQ-TTPVPFTLSLQDCKTALANGVLVTFQGVEDSTLPGLLALE 109

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 490366554 119 SSSAGGAKNVGIQILDSKsaPMSFDgAGFGNATKLHDGKNIIPFQARY--YALGATEPGIANANATFAVQYE 188
Cdd:PRK15260 110 PSSEASGFAIGVETAAQQ--PVSIN-ATVGTAFVLKEGITTINLQARLqkYAGEEVMPGEFSGSATVSFEYQ 178
PRK15288 PRK15288
putative minor fimbrial subunit StfG; Provisional
 40-187 2.79e-04

putative minor fimbrial subunit StfG; Provisional


Pssm-ID: 185188 [Multi-domain]  Cd Length: 176  Bit Score: 40.02  E-value: 2.79e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490366554  40 IFFKGELVNAACAVD-SSSDGQIVKLGQVRTAKLAKAGDfSENTNFTIQLNDCDSKVASTAKVAFTGVSAAGQDDVLAVS 118
Cdd:PRK15288  29 LHFSGSLVASPCTLTmQGTGIAEVDFSSLDSSDFTPDGQ-SARKPLVFELTDCDSALSNGVQVTFTGTEATGMRGILAID 107

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 490366554 119 SSSagGAKNVGIQILDSKSAPMSFDGAGfGNATKLHDGKNIIPFQARYYALGATE--PGIANANATFAVQY 187
Cdd:PRK15288 108 SYS--GASGIGIGIETLSGVPVGMNDEE-GAIFTLVTGKNTLSLNAWVQRLPGEDliPGRFSASALATFEY 175
PRK15262 PRK15262
putative fimbrial protein StaF; Provisional
 6-188 1.46e-03

putative fimbrial protein StaF; Provisional


Pssm-ID: 237933  Cd Length: 197  Bit Score: 37.74  E-value: 1.46e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490366554   6 LKLFVISALSVGSVFAVSaedpvgnGPVTVNGGEIFFKGELVNAACAVdSSSDGQIVKLGQVrtaklaKAGDFSEN---- 81
Cdd:PRK15262   3 RKLMKKIILFLGLLFALT-------SPPAYAGQDVDLTANIKNSTCQS-GISNNGNVDLGTV------GVGYFADNvtae 68

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490366554  82 ------TNFTIQLNDCDS----KVASTAKVAFT---GVSAAGQDDVLAvSSSSAGGAKNVGIQILDSKSAPMSF---DGA 145
Cdd:PRK15262  69 tyypggKEFTITVVDCALqgtgSVLNQLHFDFRpqsGVMATGSQQIFA-NEAVAGGAKNVGVVIFSIQDPANTFnvlNSD 147

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|
gi 490366554 146 GFGNATKLHDGKNIIP----FQARYYALGATEP---GIANANATFAVQYE 188
Cdd:PRK15262 148 GSSRSVYPVMTSALNNsswkFYARMQKIDPALDvtsGQVTSHVLVDVYYE 197
PRK15296 PRK15296
fimbrial protein SthA;
40-132 3.68e-03

fimbrial protein SthA;


Pssm-ID: 185196  Cd Length: 181  Bit Score: 36.61  E-value: 3.68e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490366554  40 IFFKGELVNAACAVDSSSDGQ-IVKLGQVRTAKLAKAGDFSENTNFTIQLNDCDSKVASTAKVAFTGVSAAGQDDVLA-- 116
Cdd:PRK15296  26 ITFNGKIYDQACTVQVNGSTDtTIDLGNYSKERIAEKGATTDYVPFTVSLVSCPEAGTGVPTQAMFRFHGATDDSNPTyf 105

                         90
                 ....*....|....*...
gi 490366554 117 --VSSSSAGGAKNVGIQI 132
Cdd:PRK15296 106 knADEGSETGAAGVGISI 123
PRK15293 PRK15293
fimbrial protein SthD;
44-188 4.79e-03

fimbrial protein SthD;


Pssm-ID: 185193  Cd Length: 185  Bit Score: 36.19  E-value: 4.79e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490366554  44 GELVNAACAVDSSSdgqIVKLGQVRTAKLAKAGDFSENTNFTIQLNDCDSKVaSTAKVAFTGVSAAGQDDVLAV-SSSSA 122
Cdd:PRK15293  41 GLIYADPCTVTVPD---TLSLGQYARADIAVAGGNTATIPFTIKMTNCPATT-TKAAISFNGVPYPDPNYASAIyANSAA 116

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 490366554 123 GGAKNVGIQI--LDSKSAPMSFDGAGFGNATKLHDGKNIIPFQARYYA-LGATEPGIANANATFAVQYE 188
Cdd:PRK15293 117 NPAQDLGLQLfnLDGKSLVNLANNVTYTVDINSNTHEANLPVAARMYTpYGKVTAGDFTSVVTITIAWQ 185
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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