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Conserved domains on  [gi|490367187|ref|WP_004246851|]
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MULTISPECIES: DUF1090 domain-containing protein [Proteus]

Protein Classification

DUF1090 domain-containing protein( domain architecture ID 10534440)

DUF1090 domain-containing protein similar to Escherichia coli YqjC

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF1090 pfam06476
Protein of unknown function (DUF1090); This family consists of several bacterial proteins of ...
 11-111 3.74e-26

Protein of unknown function (DUF1090); This family consists of several bacterial proteins of unknown function and is known as YqjC in E. coli.


:

Pssm-ID: 428965 [Multi-domain]  Cd Length: 109  Bit Score: 94.23  E-value: 3.74e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490367187   11 LSLTASYASAETAVNGCDIKKQNIQRQIDYAKMHGNQYRVQGLERALNKVERYCTPEKVVEDTRLELREKQLEVKERELE 90
Cdd:pfam06476   1 LLASLLAAAAAAALSGCAAKRQAIEKQLSYAKAHGNQHRVAGLEKALAEVRAHCTDAGLRAERQQKVAEKREEVAEREAE 80

                          90       100
                  ....*....|....*....|.
gi 490367187   91 LKEAQLKGERDKITKREDKLA 111
Cdd:pfam06476  81 LAEAQAKGDADKIAKRQRKLA 101
 
Name Accession Description Interval E-value
DUF1090 pfam06476
Protein of unknown function (DUF1090); This family consists of several bacterial proteins of ...
 11-111 3.74e-26

Protein of unknown function (DUF1090); This family consists of several bacterial proteins of unknown function and is known as YqjC in E. coli.


Pssm-ID: 428965 [Multi-domain]  Cd Length: 109  Bit Score: 94.23  E-value: 3.74e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490367187   11 LSLTASYASAETAVNGCDIKKQNIQRQIDYAKMHGNQYRVQGLERALNKVERYCTPEKVVEDTRLELREKQLEVKERELE 90
Cdd:pfam06476   1 LLASLLAAAAAAALSGCAAKRQAIEKQLSYAKAHGNQHRVAGLEKALAEVRAHCTDAGLRAERQQKVAEKREEVAEREAE 80

                          90       100
                  ....*....|....*....|.
gi 490367187   91 LKEAQLKGERDKITKREDKLA 111
Cdd:pfam06476  81 LAEAQAKGDADKIAKRQRKLA 101
 
Name Accession Description Interval E-value
DUF1090 pfam06476
Protein of unknown function (DUF1090); This family consists of several bacterial proteins of ...
 11-111 3.74e-26

Protein of unknown function (DUF1090); This family consists of several bacterial proteins of unknown function and is known as YqjC in E. coli.


Pssm-ID: 428965 [Multi-domain]  Cd Length: 109  Bit Score: 94.23  E-value: 3.74e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490367187   11 LSLTASYASAETAVNGCDIKKQNIQRQIDYAKMHGNQYRVQGLERALNKVERYCTPEKVVEDTRLELREKQLEVKERELE 90
Cdd:pfam06476   1 LLASLLAAAAAAALSGCAAKRQAIEKQLSYAKAHGNQHRVAGLEKALAEVRAHCTDAGLRAERQQKVAEKREEVAEREAE 80

                          90       100
                  ....*....|....*....|.
gi 490367187   91 LKEAQLKGERDKITKREDKLA 111
Cdd:pfam06476  81 LAEAQAKGDADKIAKRQRKLA 101
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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