NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|490374454|ref|WP_004254056|]
View 

MULTISPECIES: YeaC family protein [Providencia]

Protein Classification

YeaC family protein( domain architecture ID 10006958)

YeaC family protein similar to Escherichia coli protein YeaC

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
yeaC COG3139
Uncharacterized conserved protein YeaC, DUF1315 family [Function unknown];
9-97 1.49e-47

Uncharacterized conserved protein YeaC, DUF1315 family [Function unknown];


:

Pssm-ID: 442373  Cd Length: 92  Bit Score: 146.58  E-value: 1.49e-47
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490374454   9 QLEQLLAVMTPEIYERLVTAVELGKWPDGVMLTPEQKEHSLQMVLLWQSRHNHDPEHMTVGTNGEITMKSKQELKTLF-- 86
Cdd:COG3139    2 NFEQLIASMTPEIYERLKTAVELGKWPDGRALTEEQRELCLQAVMLYQARHNPEEQHMGIGPRGEIVCKSKQELKQQFgd 81

                         90
                 ....*....|.
gi 490374454  87 QGEMLATLKPQ 97
Cdd:COG3139   82 EEEPIARIKPD 92
 
Name Accession Description Interval E-value
yeaC COG3139
Uncharacterized conserved protein YeaC, DUF1315 family [Function unknown];
9-97 1.49e-47

Uncharacterized conserved protein YeaC, DUF1315 family [Function unknown];


Pssm-ID: 442373  Cd Length: 92  Bit Score: 146.58  E-value: 1.49e-47
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490374454   9 QLEQLLAVMTPEIYERLVTAVELGKWPDGVMLTPEQKEHSLQMVLLWQSRHNHDPEHMTVGTNGEITMKSKQELKTLF-- 86
Cdd:COG3139    2 NFEQLIASMTPEIYERLKTAVELGKWPDGRALTEEQRELCLQAVMLYQARHNPEEQHMGIGPRGEIVCKSKQELKQQFgd 81

                         90
                 ....*....|.
gi 490374454  87 QGEMLATLKPQ 97
Cdd:COG3139   82 EEEPIARIKPD 92
DUF1315 pfam07023
Protein of unknown function (DUF1315); This family consists of several bacterial proteins of ...
 11-79 2.11e-23

Protein of unknown function (DUF1315); This family consists of several bacterial proteins of around 90 residues in length. The function of this family is unknown.


Pssm-ID: 429252  Cd Length: 82  Bit Score: 85.27  E-value: 2.11e-23
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 490374454   11 EQLLAVMTPEIYERLVTAVELGKWPDGVMLTPEQKEHSLQMVLLWQSRHNHDPEHMtvgtnGEITMKSK 79
Cdd:pfam07023   1 QQLLASMTPDVYQRLKRAVEIGKWPDGSRLTEEQRDLCMQAVMAYEAKHLPEDEHM-----GYIPRKSK 64
 
Name Accession Description Interval E-value
yeaC COG3139
Uncharacterized conserved protein YeaC, DUF1315 family [Function unknown];
9-97 1.49e-47

Uncharacterized conserved protein YeaC, DUF1315 family [Function unknown];


Pssm-ID: 442373  Cd Length: 92  Bit Score: 146.58  E-value: 1.49e-47
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490374454   9 QLEQLLAVMTPEIYERLVTAVELGKWPDGVMLTPEQKEHSLQMVLLWQSRHNHDPEHMTVGTNGEITMKSKQELKTLF-- 86
Cdd:COG3139    2 NFEQLIASMTPEIYERLKTAVELGKWPDGRALTEEQRELCLQAVMLYQARHNPEEQHMGIGPRGEIVCKSKQELKQQFgd 81

                         90
                 ....*....|.
gi 490374454  87 QGEMLATLKPQ 97
Cdd:COG3139   82 EEEPIARIKPD 92
DUF1315 pfam07023
Protein of unknown function (DUF1315); This family consists of several bacterial proteins of ...
 11-79 2.11e-23

Protein of unknown function (DUF1315); This family consists of several bacterial proteins of around 90 residues in length. The function of this family is unknown.


Pssm-ID: 429252  Cd Length: 82  Bit Score: 85.27  E-value: 2.11e-23
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 490374454   11 EQLLAVMTPEIYERLVTAVELGKWPDGVMLTPEQKEHSLQMVLLWQSRHNHDPEHMtvgtnGEITMKSK 79
Cdd:pfam07023   1 QQLLASMTPDVYQRLKRAVEIGKWPDGSRLTEEQRDLCMQAVMAYEAKHLPEDEHM-----GYIPRKSK 64
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH