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MULTISPECIES: penicillin-binding protein 2 [Thermoanaerobacter]
Protein Classification
peptidoglycan D,D-transpeptidase FtsI family protein ( domain architecture ID 11433609 )
peptidoglycan D,D-transpeptidase FtsI (penicillin-binding protein (PBP) 2) family protein is a membrane-associated enzyme that is most likely involved in the synthesis of cross-linked peptidoglycan
List of domain hits
Name
Accession
Description
Interval
E-value
FtsI
COG0768
Cell division protein FtsI, peptidoglycan transpeptidase (Penicillin-binding protein 2) [Cell ...
2-474
5.74e-149
Cell division protein FtsI, peptidoglycan transpeptidase (Penicillin-binding protein 2) [Cell cycle control, cell division, chromosome partitioning, Cell wall/membrane/envelope biogenesis];
:Pssm-ID: 440531 [Multi-domain]
Cd Length: 568
Bit Score: 436.56
E-value: 5.74e-149
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490535313 2 SNLN R NIKI LF GVFSV LF FG L IAY L T Y F Q IY E R D RLITSSY svy NR R LIEQEKKIL RG S I L DRNG I VLA KSI ---- IE AD 77
Cdd:COG0768 8 RLFR R RLLL LF LLVLL LF LL L VGR L F Y L Q VV E G D EYAELAE --- EN R IRTVPIPAP RG L I Y DRNG N VLA TNV pvys LY AD 84
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490535313 78 GSQ -------------------------------------------------------------- KR E Y LD G PAF A Q V I G 95
Cdd:COG0768 85 PEE vkdpeetaeklakllgldpeelrkklkkksrfpvylkrnlspeeaariralklpgvyveaey KR Y Y PY G ELA A H V L G 164
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490535313 96 Y SRR I Y --- QQ G NA G I EKAY DRE L L G MV G ndpii IL R KL V L A K G Q V ------------ G DNVY LTID KT LQ DL A YKEMEG 160
Cdd:COG0768 165 Y VGE I N ggd GI G KS G L EKAY EDL L R G TP G ----- KR R VE V D A R G R V irdlgeekppvp G KDLV LTID SD LQ KI A EEALKK 239
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490535313 161 ------- K K GAVVV LN PKTGEILAM V S T PS Y DPN TLGE nwkeimt S PD NVVL NRA T QG L Y P PGS V FK IV T T AA V L --- TY 230
Cdd:COG0768 240 aveeyka K S GAVVV MD PKTGEILAM A S Y PS F DPN LFVG ------- G PD EPLR NRA V QG T Y E PGS T FK PF T A AA A L eeg VI 312
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490535313 231 E P ely NK TFDC K GY II V D G NR I N D FGGIA HG IEDFKQ A FYR S C N SF F IQIG L D LG SEN L QSMAYN FGL DKRVPLEIDTAK 310
Cdd:COG0768 313 T P --- DT TFDC P GY YR V G G RT I R D WDRGG HG TLTLTE A LAK S S N VG F YKLA L R LG IDK L YDYLKK FGL GQKTGIDLPGEA 389
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490535313 311 N - YF P PIE -- GKVAL A ET SIGQG k IL VTPL TM A LVAS A V AN D GV IM KP Y L MRYVA DP ISGT V I E KSTPSQYL np IS KKV A 387
Cdd:COG0768 390 S g LL P SPK rw YPGET A TM SIGQG - LS VTPL QL A QAYA A I AN G GV LV KP H L VKEIV DP DGEV V K E EPEVLRRV -- IS PET A 466
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490535313 388 D T IKQL M I G A VN DKE GT GKA A Q IPG IT VAGKTGTA ENPHGAPH -------- A W FVGFAPA E NP QIV V S V I VEN G G E --- G 456
Cdd:COG0768 467 E T VREG M E G V VN EPG GT ARR A A IPG YR VAGKTGTA QVVDIGNG gyykgrhi A S FVGFAPA D NP RYA V A V V VEN P G G gay G 546
570
....*....|....*...
gi 490535313 457 G K VAAP IA R D I IRS YL TK 474
Cdd:COG0768 547 G T VAAP VF R E I MEA YL RL 564
Name
Accession
Description
Interval
E-value
FtsI
COG0768
Cell division protein FtsI, peptidoglycan transpeptidase (Penicillin-binding protein 2) [Cell ...
2-474
5.74e-149
Cell division protein FtsI, peptidoglycan transpeptidase (Penicillin-binding protein 2) [Cell cycle control, cell division, chromosome partitioning, Cell wall/membrane/envelope biogenesis];
Pssm-ID: 440531 [Multi-domain]
Cd Length: 568
Bit Score: 436.56
E-value: 5.74e-149
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490535313 2 SNLN R NIKI LF GVFSV LF FG L IAY L T Y F Q IY E R D RLITSSY svy NR R LIEQEKKIL RG S I L DRNG I VLA KSI ---- IE AD 77
Cdd:COG0768 8 RLFR R RLLL LF LLVLL LF LL L VGR L F Y L Q VV E G D EYAELAE --- EN R IRTVPIPAP RG L I Y DRNG N VLA TNV pvys LY AD 84
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490535313 78 GSQ -------------------------------------------------------------- KR E Y LD G PAF A Q V I G 95
Cdd:COG0768 85 PEE vkdpeetaeklakllgldpeelrkklkkksrfpvylkrnlspeeaariralklpgvyveaey KR Y Y PY G ELA A H V L G 164
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490535313 96 Y SRR I Y --- QQ G NA G I EKAY DRE L L G MV G ndpii IL R KL V L A K G Q V ------------ G DNVY LTID KT LQ DL A YKEMEG 160
Cdd:COG0768 165 Y VGE I N ggd GI G KS G L EKAY EDL L R G TP G ----- KR R VE V D A R G R V irdlgeekppvp G KDLV LTID SD LQ KI A EEALKK 239
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490535313 161 ------- K K GAVVV LN PKTGEILAM V S T PS Y DPN TLGE nwkeimt S PD NVVL NRA T QG L Y P PGS V FK IV T T AA V L --- TY 230
Cdd:COG0768 240 aveeyka K S GAVVV MD PKTGEILAM A S Y PS F DPN LFVG ------- G PD EPLR NRA V QG T Y E PGS T FK PF T A AA A L eeg VI 312
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490535313 231 E P ely NK TFDC K GY II V D G NR I N D FGGIA HG IEDFKQ A FYR S C N SF F IQIG L D LG SEN L QSMAYN FGL DKRVPLEIDTAK 310
Cdd:COG0768 313 T P --- DT TFDC P GY YR V G G RT I R D WDRGG HG TLTLTE A LAK S S N VG F YKLA L R LG IDK L YDYLKK FGL GQKTGIDLPGEA 389
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490535313 311 N - YF P PIE -- GKVAL A ET SIGQG k IL VTPL TM A LVAS A V AN D GV IM KP Y L MRYVA DP ISGT V I E KSTPSQYL np IS KKV A 387
Cdd:COG0768 390 S g LL P SPK rw YPGET A TM SIGQG - LS VTPL QL A QAYA A I AN G GV LV KP H L VKEIV DP DGEV V K E EPEVLRRV -- IS PET A 466
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490535313 388 D T IKQL M I G A VN DKE GT GKA A Q IPG IT VAGKTGTA ENPHGAPH -------- A W FVGFAPA E NP QIV V S V I VEN G G E --- G 456
Cdd:COG0768 467 E T VREG M E G V VN EPG GT ARR A A IPG YR VAGKTGTA QVVDIGNG gyykgrhi A S FVGFAPA D NP RYA V A V V VEN P G G gay G 546
570
....*....|....*...
gi 490535313 457 G K VAAP IA R D I IRS YL TK 474
Cdd:COG0768 547 G T VAAP VF R E I MEA YL RL 564
pbp2_mrdA
TIGR03423
penicillin-binding protein 2; Members of this protein family are penicillin-binding protein 2 ...
6-474
1.01e-126
penicillin-binding protein 2; Members of this protein family are penicillin-binding protein 2 (PBP-2), a protein whose gene (designated pbpA or mrdA) generally is found next to the gene for RodA, a protein required for rod (bacillus) shape in many bacteria. PBP-2 acts as a transpeptidase for cell elongation (hence, rod-shape). [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]
Pssm-ID: 274573 [Multi-domain]
Cd Length: 592
Bit Score: 380.72
E-value: 1.01e-126
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490535313 6 R NIKI L F G VFSV LF FG L I A Y L T Y F Q IYERDRLI T S S YS vy NR R lie QEKK I L -- RG S ILDRNG IV LA KSI ---------- 73
Cdd:TIGR03423 1 R RALV L G G LVLA LF GV L A A R L F Y L Q VIRGEEYA T L S ED -- NR I --- RLVP I P pp RG L ILDRNG VL LA DNR psfsleivpe 75
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490535313 74 -------------------------------------------------------------- I E ADGSQ KR E Y LD G PAF A 91
Cdd:TIGR03423 76 kvddldatldrlaklldldpediarflkelkrsrrfepiplksdlteeevarfavnqyrlpg V E IEARL KR Y Y PY G ELA A 155
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490535313 92 Q V I GY SRR I YQQ ---------------- G NA GIEK A Y DR EL L G MV G ndpii ILRKL V L A K G Q V ----------- G DNVY L 144
Cdd:TIGR03423 156 H V L GY VGE I NEE dlerlepanyaggdyi G KS GIEK Y Y ED EL R G KP G ----- YREVE V N A R G R V irtlsrvppvp G KDLV L 230
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490535313 145 TID KT LQ DL A Y K EME G KK GAVVV LN P K TGEILAMVSTPS Y DPN TL ----- GENW K EIMTS PD NVV LNRA T QG L YPPGS V F 219
Cdd:TIGR03423 231 TID AR LQ QA A E K ALG G RR GAVVV MD P R TGEILAMVSTPS F DPN LF vdgis SKDY K ALLND PD RPL LNRA I QG V YPPGS T F 310
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490535313 220 K I V TTA A V L --- TYE PE lyn KTFD C K GY IIVD G N R INDFGGIA HG IE D FKQ A FYR SC NSF F I Q IG L D LG SENLQSM A YN F 296
Cdd:TIGR03423 311 K P V VAL A A L eeg VIT PE --- TRIY C P GY FQLG G R R FRCWKRGG HG RV D LRK A IEE SC DVY F Y Q LA L R LG IDKIAEY A KR F 387
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490535313 297 G LDKRVPLEI --------- DTA ------- KNYF P piegkval AE T --- SIGQG KI LVTPL TM A LVAS A V AN D G VIM KP Y L 357
Cdd:TIGR03423 388 G FGQKTGIDL pgeksglvp SRE wkrkrfg QPWY P -------- GD T lnv SIGQG YV LVTPL QL A VATA A L AN G G KLY KP H L 459
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490535313 358 MRYVA DP IS G T V IEKSTPSQYLN PIS KKVA D TIKQL M IGA VN DKE GT GKA A QIP - GITV AGKTGTA E ---------- NPH 426
Cdd:TIGR03423 460 VKSIE DP DG G V V RRTEPEVLRPL PIS PENL D VVREG M RDV VN GPG GT ARR A RLG l PYKM AGKTGTA Q vvslkqgeky DAE 539
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|...
gi 490535313 427 GA P ----- HA W FV G FAP AE NP Q I V V S VIVE N GG E G GKV AAPIAR D I IRS YL TK 474
Cdd:TIGR03423 540 QI P erlrd HA L FV A FAP YD NP K I A V A VIVE H GG G G SSA AAPIAR K I MDA YL LG 592
Transpeptidase
pfam00905
Penicillin binding protein transpeptidase domain; The active site serine (residue 337 in Swiss: ...
163-468
2.57e-73
Penicillin binding protein transpeptidase domain; The active site serine (residue 337 in Swiss:P14677) is conserved in all members of this family.
Pssm-ID: 425939 [Multi-domain]
Cd Length: 296
Bit Score: 233.08
E-value: 2.57e-73
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490535313 163 G AV VVL N PKTGE I LAMV ST PSYDPN TLGENW keimtspdnvv L NRA TQGL Y P PGS V FK IV T TA A V L --- TYE P ely NK T F 239
Cdd:pfam00905 1 G SA VVL D PKTGE V LAMV GK PSYDPN GFIGPL ----------- R NRA VTSR Y E PGS T FK PF T AL A A L dng VLK P --- DE T I 66
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490535313 240 DCKGYIIVD G NR I N D FGGIAH GI EDFK QA FYR S C N SFFIQIGLD LG SEN L Q S MAYN FG LDKRVPLEIDTAKNYFPP --- I 316
Cdd:pfam00905 67 FDWPGKQQG G KS I G D WNQDQV GI GTLR QA LEY S S N WYMQKLAQK LG ADK L R S YLKK FG YGNKTGIGLPGENAGYLT pyw L 146
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490535313 317 EG kv A L A ETS IG qgk ILV TPL TM A LVAS A V AN D G VIMK P Y L MRYVA D PISGT V IE K stpsqyl N PISK KV A DTI K QLMIG 396
Cdd:pfam00905 147 EG -- A T A SFG IG --- LTI TPL QQ A QAYA A I AN G G KLVP P H L VKSIE D KVDPK V LN K ------- L PISK ST A EKV K DMLRL 214
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490535313 397 A VND KE GTG K AA q I PG IT VAGKTGTA E -------- NPH GA PHA WFVG F APA E NP QIVVS V IVENGG -- E GGKVAAPI AR D 466
Cdd:pfam00905 215 V VND GT GTG T AA - V PG YK VAGKTGTA Q vagpkggg YYD GA QIG WFVG Y APA D NP KYAFA V LIDDPK ry Y GGKVAAPI FK D 293
..
gi 490535313 467 I I 468
Cdd:pfam00905 294 I L 295
PRK10795
PRK10795
penicillin-binding protein 2; Provisional
74-468
8.05e-51
penicillin-binding protein 2; Provisional
Pssm-ID: 236761 [Multi-domain]
Cd Length: 634
Bit Score: 182.66
E-value: 8.05e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490535313 74 I E AD G S Q K R E Y LD G P A FAQ VIGY SRR I YQQ -------------------- G NA GIE KA Y DRE L L G MV G ------ N DPIII 127
Cdd:PRK10795 157 V E VK G Y Q R R Y Y PY G S A LTH VIGY VSK I NDK dverldkegklanyaathdi G KL GIE RY Y EDV L H G KT G yeevev N NRGRV 236
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490535313 128 L R K L VLAKG Q V G DNV YLT I D KT LQ DLAYKEME G KKG AVVV LN P K TG E ILA M VSTPSYDPN TL ----- GENWKEIMTS P DN 202
Cdd:PRK10795 237 I R Q L HEQPP Q A G HDI YLT L D LK LQ QYIETLLA G SRA AVVV TD P R TG G ILA L VSTPSYDPN LF vdgis SKDYSGLLND P NR 316
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490535313 203 VVL NRATQG L YPP G S VF K IVTTAAV L TYEPELY N KTFDCK G YIIVD G N -- R IN D FGGIA HG IEDFKQAFYR S CNS FF I Q I 280
Cdd:PRK10795 317 PLI NRATQG V YPP A S TV K PYVAVSA L SAGVITR N TSLFDP G WWQLP G S ek R YR D WKKWG HG RLNVTKSLEE S ADT FF Y Q V 396
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490535313 281 GL D L G SEN L QSMAYN FG LDKRVPLEI -- DTAK N y F P PI E G K VALAE ---------- TS IGQG KILV TP LT M ALVASAVA N 348
Cdd:PRK10795 397 AY D M G IDR L SEWMGK FG YGHYTGIDL ae ERSG N - M P TR E W K QKRFK kpwyqgdtip VG IGQG YWTA TP IQ M SKALMTLI N 475
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490535313 349 DG VIMK P Y L M ryvadpi SG T V i E KSTPSQYLN P ISKK V A D ------- TI K QL M I G AV N DKE GT GKA -- A QI P g ITV A G K T 419
Cdd:PRK10795 476 DG IVKV P H L L ------- MS T A - E DGKQVPWVQ P HEPP V G D ihsgywe IA K DG M Y G VA N RPN GT AHK yf A SA P - YKI A A K S 546
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 490535313 420 GTA E --------------- NPHGAP H AWFVG FAP AE NPQ IV V SV I V ENGG E G GK V AA p I A R D I I 468
Cdd:PRK10795 547 GTA Q vfglkanetynahki AERLRD H KLMTA FAP YN NPQ VA V AI I L ENGG A G PA V GT - I M R Q I L 609
Name
Accession
Description
Interval
E-value
FtsI
COG0768
Cell division protein FtsI, peptidoglycan transpeptidase (Penicillin-binding protein 2) [Cell ...
2-474
5.74e-149
Cell division protein FtsI, peptidoglycan transpeptidase (Penicillin-binding protein 2) [Cell cycle control, cell division, chromosome partitioning, Cell wall/membrane/envelope biogenesis];
Pssm-ID: 440531 [Multi-domain]
Cd Length: 568
Bit Score: 436.56
E-value: 5.74e-149
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490535313 2 SNLN R NIKI LF GVFSV LF FG L IAY L T Y F Q IY E R D RLITSSY svy NR R LIEQEKKIL RG S I L DRNG I VLA KSI ---- IE AD 77
Cdd:COG0768 8 RLFR R RLLL LF LLVLL LF LL L VGR L F Y L Q VV E G D EYAELAE --- EN R IRTVPIPAP RG L I Y DRNG N VLA TNV pvys LY AD 84
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490535313 78 GSQ -------------------------------------------------------------- KR E Y LD G PAF A Q V I G 95
Cdd:COG0768 85 PEE vkdpeetaeklakllgldpeelrkklkkksrfpvylkrnlspeeaariralklpgvyveaey KR Y Y PY G ELA A H V L G 164
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490535313 96 Y SRR I Y --- QQ G NA G I EKAY DRE L L G MV G ndpii IL R KL V L A K G Q V ------------ G DNVY LTID KT LQ DL A YKEMEG 160
Cdd:COG0768 165 Y VGE I N ggd GI G KS G L EKAY EDL L R G TP G ----- KR R VE V D A R G R V irdlgeekppvp G KDLV LTID SD LQ KI A EEALKK 239
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490535313 161 ------- K K GAVVV LN PKTGEILAM V S T PS Y DPN TLGE nwkeimt S PD NVVL NRA T QG L Y P PGS V FK IV T T AA V L --- TY 230
Cdd:COG0768 240 aveeyka K S GAVVV MD PKTGEILAM A S Y PS F DPN LFVG ------- G PD EPLR NRA V QG T Y E PGS T FK PF T A AA A L eeg VI 312
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490535313 231 E P ely NK TFDC K GY II V D G NR I N D FGGIA HG IEDFKQ A FYR S C N SF F IQIG L D LG SEN L QSMAYN FGL DKRVPLEIDTAK 310
Cdd:COG0768 313 T P --- DT TFDC P GY YR V G G RT I R D WDRGG HG TLTLTE A LAK S S N VG F YKLA L R LG IDK L YDYLKK FGL GQKTGIDLPGEA 389
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490535313 311 N - YF P PIE -- GKVAL A ET SIGQG k IL VTPL TM A LVAS A V AN D GV IM KP Y L MRYVA DP ISGT V I E KSTPSQYL np IS KKV A 387
Cdd:COG0768 390 S g LL P SPK rw YPGET A TM SIGQG - LS VTPL QL A QAYA A I AN G GV LV KP H L VKEIV DP DGEV V K E EPEVLRRV -- IS PET A 466
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490535313 388 D T IKQL M I G A VN DKE GT GKA A Q IPG IT VAGKTGTA ENPHGAPH -------- A W FVGFAPA E NP QIV V S V I VEN G G E --- G 456
Cdd:COG0768 467 E T VREG M E G V VN EPG GT ARR A A IPG YR VAGKTGTA QVVDIGNG gyykgrhi A S FVGFAPA D NP RYA V A V V VEN P G G gay G 546
570
....*....|....*...
gi 490535313 457 G K VAAP IA R D I IRS YL TK 474
Cdd:COG0768 547 G T VAAP VF R E I MEA YL RL 564
pbp2_mrdA
TIGR03423
penicillin-binding protein 2; Members of this protein family are penicillin-binding protein 2 ...
6-474
1.01e-126
penicillin-binding protein 2; Members of this protein family are penicillin-binding protein 2 (PBP-2), a protein whose gene (designated pbpA or mrdA) generally is found next to the gene for RodA, a protein required for rod (bacillus) shape in many bacteria. PBP-2 acts as a transpeptidase for cell elongation (hence, rod-shape). [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]
Pssm-ID: 274573 [Multi-domain]
Cd Length: 592
Bit Score: 380.72
E-value: 1.01e-126
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490535313 6 R NIKI L F G VFSV LF FG L I A Y L T Y F Q IYERDRLI T S S YS vy NR R lie QEKK I L -- RG S ILDRNG IV LA KSI ---------- 73
Cdd:TIGR03423 1 R RALV L G G LVLA LF GV L A A R L F Y L Q VIRGEEYA T L S ED -- NR I --- RLVP I P pp RG L ILDRNG VL LA DNR psfsleivpe 75
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490535313 74 -------------------------------------------------------------- I E ADGSQ KR E Y LD G PAF A 91
Cdd:TIGR03423 76 kvddldatldrlaklldldpediarflkelkrsrrfepiplksdlteeevarfavnqyrlpg V E IEARL KR Y Y PY G ELA A 155
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490535313 92 Q V I GY SRR I YQQ ---------------- G NA GIEK A Y DR EL L G MV G ndpii ILRKL V L A K G Q V ----------- G DNVY L 144
Cdd:TIGR03423 156 H V L GY VGE I NEE dlerlepanyaggdyi G KS GIEK Y Y ED EL R G KP G ----- YREVE V N A R G R V irtlsrvppvp G KDLV L 230
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490535313 145 TID KT LQ DL A Y K EME G KK GAVVV LN P K TGEILAMVSTPS Y DPN TL ----- GENW K EIMTS PD NVV LNRA T QG L YPPGS V F 219
Cdd:TIGR03423 231 TID AR LQ QA A E K ALG G RR GAVVV MD P R TGEILAMVSTPS F DPN LF vdgis SKDY K ALLND PD RPL LNRA I QG V YPPGS T F 310
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490535313 220 K I V TTA A V L --- TYE PE lyn KTFD C K GY IIVD G N R INDFGGIA HG IE D FKQ A FYR SC NSF F I Q IG L D LG SENLQSM A YN F 296
Cdd:TIGR03423 311 K P V VAL A A L eeg VIT PE --- TRIY C P GY FQLG G R R FRCWKRGG HG RV D LRK A IEE SC DVY F Y Q LA L R LG IDKIAEY A KR F 387
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490535313 297 G LDKRVPLEI --------- DTA ------- KNYF P piegkval AE T --- SIGQG KI LVTPL TM A LVAS A V AN D G VIM KP Y L 357
Cdd:TIGR03423 388 G FGQKTGIDL pgeksglvp SRE wkrkrfg QPWY P -------- GD T lnv SIGQG YV LVTPL QL A VATA A L AN G G KLY KP H L 459
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490535313 358 MRYVA DP IS G T V IEKSTPSQYLN PIS KKVA D TIKQL M IGA VN DKE GT GKA A QIP - GITV AGKTGTA E ---------- NPH 426
Cdd:TIGR03423 460 VKSIE DP DG G V V RRTEPEVLRPL PIS PENL D VVREG M RDV VN GPG GT ARR A RLG l PYKM AGKTGTA Q vvslkqgeky DAE 539
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|...
gi 490535313 427 GA P ----- HA W FV G FAP AE NP Q I V V S VIVE N GG E G GKV AAPIAR D I IRS YL TK 474
Cdd:TIGR03423 540 QI P erlrd HA L FV A FAP YD NP K I A V A VIVE H GG G G SSA AAPIAR K I MDA YL LG 592
Transpeptidase
pfam00905
Penicillin binding protein transpeptidase domain; The active site serine (residue 337 in Swiss: ...
163-468
2.57e-73
Penicillin binding protein transpeptidase domain; The active site serine (residue 337 in Swiss:P14677) is conserved in all members of this family.
Pssm-ID: 425939 [Multi-domain]
Cd Length: 296
Bit Score: 233.08
E-value: 2.57e-73
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490535313 163 G AV VVL N PKTGE I LAMV ST PSYDPN TLGENW keimtspdnvv L NRA TQGL Y P PGS V FK IV T TA A V L --- TYE P ely NK T F 239
Cdd:pfam00905 1 G SA VVL D PKTGE V LAMV GK PSYDPN GFIGPL ----------- R NRA VTSR Y E PGS T FK PF T AL A A L dng VLK P --- DE T I 66
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490535313 240 DCKGYIIVD G NR I N D FGGIAH GI EDFK QA FYR S C N SFFIQIGLD LG SEN L Q S MAYN FG LDKRVPLEIDTAKNYFPP --- I 316
Cdd:pfam00905 67 FDWPGKQQG G KS I G D WNQDQV GI GTLR QA LEY S S N WYMQKLAQK LG ADK L R S YLKK FG YGNKTGIGLPGENAGYLT pyw L 146
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490535313 317 EG kv A L A ETS IG qgk ILV TPL TM A LVAS A V AN D G VIMK P Y L MRYVA D PISGT V IE K stpsqyl N PISK KV A DTI K QLMIG 396
Cdd:pfam00905 147 EG -- A T A SFG IG --- LTI TPL QQ A QAYA A I AN G G KLVP P H L VKSIE D KVDPK V LN K ------- L PISK ST A EKV K DMLRL 214
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490535313 397 A VND KE GTG K AA q I PG IT VAGKTGTA E -------- NPH GA PHA WFVG F APA E NP QIVVS V IVENGG -- E GGKVAAPI AR D 466
Cdd:pfam00905 215 V VND GT GTG T AA - V PG YK VAGKTGTA Q vagpkggg YYD GA QIG WFVG Y APA D NP KYAFA V LIDDPK ry Y GGKVAAPI FK D 293
..
gi 490535313 467 I I 468
Cdd:pfam00905 294 I L 295
spoVD_pbp
TIGR02214
stage V sporulation protein D; This model describes the spoVD subfamily of homologs of the ...
30-472
2.93e-73
stage V sporulation protein D; This model describes the spoVD subfamily of homologs of the cell division protein FtsI, a penicillin binding protein. This subfamily is restricted to Bacillus subtilis and related Gram-positive species with known or suspected endospore formation capability. In these species, the functional equivalent of FtsI is desginated PBP-2B, a paralog of spoVD. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan, Cellular processes, Sporulation and germination]
Pssm-ID: 131269 [Multi-domain]
Cd Length: 636
Bit Score: 243.18
E-value: 2.93e-73
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490535313 30 QIYE R drl IT SSY S VYN ---- R R L IE QE K - KIL R G si L DR NG IVLAKS iieadgs Q KR E Y LD G PAFAQ V I G YSRR i YQQ G 104
Cdd:TIGR02214 101 KVFK R --- IT KKN S PFV sakl G R K IE KD K a EKV R N -- L KL NG VSVSPD ------- S KR Y Y PN G DFLSH V L G FTNS - DGR G 167
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490535313 105 NA G I E KA YD R EL L G MV G ndpii ILRKLVL A KGQ ------------- V G DNVY LTID KTL Q DLAYK E ME ------- G K KGA 164
Cdd:TIGR02214 168 LE G L E LY YD K EL R G LP G ----- VRVAEYD A NSL elpyaqhayvkpv D G HDLV LTID ENI Q YIIER E AD kalrerk P K GVS 242
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490535313 165 VV V L NPK T GEIL A M VST P S YDPN tlg ENWKE imt SPD NVVL NRA TQGL Y P PGS V FKI V T TA A VLTYEPELYNKT F DCK G Y 244
Cdd:TIGR02214 243 II V M NPK N GEIL G M SNR P T YDPN --- DPRDK --- SPD TARR NRA VSDA Y E PGS T FKI I T SS A AMEEGIVKESDK F YDD G S 316
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490535313 245 II V D G NR I NDFGGIA HG IED F KQAFYR SCN SF FI QI G LD LG S E N L QSMAYN FG LDKRVPLEID - T A KNYFP P IE -- G K V A 321
Cdd:TIGR02214 317 AT V G G KK I KCWKPGG HG SQT F PEVVQN SCN PG FI EL G MR LG A E K L NNYILA FG FGSKTGIDLP g E A AGILV P KK kv G P V D 396
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490535313 322 LA ET S I GQ GKI l VTP LTMALVAS AVAN D G VIMK P YL M RYVA D PISGT V IEKST P SQYLNPI SK KVADTIKQLMIGA V N dk 401
Cdd:TIGR02214 397 LA TI S F GQ ANT - VTP IQLMTAVN AVAN G G KLIQ P HI M KEIS D SQNNA V DQTFE P EVKRQVV SK ETTQKLRLALETV V S -- 473
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490535313 402 E G T GK A A Q I P G IT V A GKTGTA ENP ------- H G APHAW FVGFAPA EN P QIV V S V I V E N -- G GE -- GG K VAAP IARDIIRS 470
Cdd:TIGR02214 474 K G S GK N A F I E G YR V G GKTGTA QKV kpnggym E G EYIVS FVGFAPA DD P AVA V L V V V D N pk G VQ qf GG L VAAP VFGSVFND 553
..
gi 490535313 471 Y L 472
Cdd:TIGR02214 554 I L 555
PRK10795
PRK10795
penicillin-binding protein 2; Provisional
74-468
8.05e-51
penicillin-binding protein 2; Provisional
Pssm-ID: 236761 [Multi-domain]
Cd Length: 634
Bit Score: 182.66
E-value: 8.05e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490535313 74 I E AD G S Q K R E Y LD G P A FAQ VIGY SRR I YQQ -------------------- G NA GIE KA Y DRE L L G MV G ------ N DPIII 127
Cdd:PRK10795 157 V E VK G Y Q R R Y Y PY G S A LTH VIGY VSK I NDK dverldkegklanyaathdi G KL GIE RY Y EDV L H G KT G yeevev N NRGRV 236
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490535313 128 L R K L VLAKG Q V G DNV YLT I D KT LQ DLAYKEME G KKG AVVV LN P K TG E ILA M VSTPSYDPN TL ----- GENWKEIMTS P DN 202
Cdd:PRK10795 237 I R Q L HEQPP Q A G HDI YLT L D LK LQ QYIETLLA G SRA AVVV TD P R TG G ILA L VSTPSYDPN LF vdgis SKDYSGLLND P NR 316
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490535313 203 VVL NRATQG L YPP G S VF K IVTTAAV L TYEPELY N KTFDCK G YIIVD G N -- R IN D FGGIA HG IEDFKQAFYR S CNS FF I Q I 280
Cdd:PRK10795 317 PLI NRATQG V YPP A S TV K PYVAVSA L SAGVITR N TSLFDP G WWQLP G S ek R YR D WKKWG HG RLNVTKSLEE S ADT FF Y Q V 396
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490535313 281 GL D L G SEN L QSMAYN FG LDKRVPLEI -- DTAK N y F P PI E G K VALAE ---------- TS IGQG KILV TP LT M ALVASAVA N 348
Cdd:PRK10795 397 AY D M G IDR L SEWMGK FG YGHYTGIDL ae ERSG N - M P TR E W K QKRFK kpwyqgdtip VG IGQG YWTA TP IQ M SKALMTLI N 475
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490535313 349 DG VIMK P Y L M ryvadpi SG T V i E KSTPSQYLN P ISKK V A D ------- TI K QL M I G AV N DKE GT GKA -- A QI P g ITV A G K T 419
Cdd:PRK10795 476 DG IVKV P H L L ------- MS T A - E DGKQVPWVQ P HEPP V G D ihsgywe IA K DG M Y G VA N RPN GT AHK yf A SA P - YKI A A K S 546
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 490535313 420 GTA E --------------- NPHGAP H AWFVG FAP AE NPQ IV V SV I V ENGG E G GK V AA p I A R D I I 468
Cdd:PRK10795 547 GTA Q vfglkanetynahki AERLRD H KLMTA FAP YN NPQ VA V AI I L ENGG A G PA V GT - I M R Q I L 609
MrcB
COG0744
Penicillin-binding protein 1B/1F, peptidoglycan transglycosylase/transpeptidase [Cell wall ...
139-472
1.50e-50
Penicillin-binding protein 1B/1F, peptidoglycan transglycosylase/transpeptidase [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 440507 [Multi-domain]
Cd Length: 630
Bit Score: 181.66
E-value: 1.50e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490535313 139 G DNV Y L T I D KT LQ DL A Y K --------- EME G KKG A V VV LN PKTGE I LAMV STPS Y DPNTL genwkeimtspdnvvl NRAT 209
Cdd:COG0744 294 G LKI Y T T L D PK LQ KA A E K avknvlpeg KPG G LQA A L VV VD PKTGE V LAMV GGRD Y GKSQF ---------------- NRAT 357
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490535313 210 Q GLYP PGS V FK IVTT AA V L T -- Y E P ely NK T F D CKGYIIVD G N - RINDFG G IAH G IEDFKQ A FYR S C N SFFIQIGLDL G S 286
Cdd:COG0744 358 Q AKRQ PGS T FK PFVY AA A L E qg Y T P --- AT T V D DEPVTFPG G G w SPKNYD G RYR G PVTLRE A LAN S L N TPAVRLAQEV G L 434
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490535313 287 ENLQSM A YNF G ldkrvple I DTAKNYF P PI egkv AL aetsigq G KIL V T PL T MA LVASAV AN D GV IMK P YLMRY V A D P i S 366
Cdd:COG0744 435 DKVVDT A RRL G -------- I TSPLDPN P SL ---- AL ------- G TSE V S PL E MA SAYATF AN G GV YVE P HAITK V T D A - D 494
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490535313 367 G T V IEKST P SQY l NP IS KK VA DTIKQLMIGA V N dk E GTG K AA QI PG IT VAGKTGT AEN phg APH AWFVG F apae N PQ I V V 446
Cdd:COG0744 495 G K V LYEAK P KCE - QV IS PE VA YLMTDMLQDV V T -- S GTG R AA RL PG RP VAGKTGT TND --- NRD AWFVG Y ---- T PQ L V T 564
330 340 350
....*....|....*....|....*....|...
gi 490535313 447 S V I V E N ------- GGE GG KVA API A RD IIRSY L 472
Cdd:COG0744 565 A V W V G N ddnspmg YVT GG SLP API W RD FMEAA L 597
PBP_1a_fam
TIGR02074
penicillin-binding protein, 1A family; Bacterial that synthesize a cell wall of peptidoglycan ...
142-472
2.09e-37
penicillin-binding protein, 1A family; Bacterial that synthesize a cell wall of peptidoglycan (murein) generally have several transglycosylases and transpeptidases for the task. This family consists of bifunctional transglycosylase/transpeptidase penicillin-binding proteins (PBP). In the Proteobacteria, this family includes PBP 1A but not the paralogous PBP 1B (TIGR02071). This family also includes related proteins, often designated PBP 1A, from other bacterial lineages. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]
Pssm-ID: 273955 [Multi-domain]
Cd Length: 531
Bit Score: 143.55
E-value: 2.09e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490535313 142 V Y L T I D KTL Q DL A Y K EMEGKK ------------ G A V V VLN P K TG EIL A M V STPS Y DPNTL genwkeimtspdnvvl NRAT 209
Cdd:TIGR02074 224 I Y T T L D LDA Q KA A E K VLNTGL rvagrrdgddlq A A L V AID P D TG AVR A L V GGRD Y GKSQF ---------------- NRAT 287
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490535313 210 Q GLYP PGS V FK IVTT AA V L TY ---------- EP EL YN KT fdc KGYII vdgnri NDF GG IAH G IEDFK QA FYR S C N SFFIQ 279
Cdd:TIGR02074 288 Q AKRQ PGS T FK PFVY AA A L EK gltpativnd EP IT YN GN --- GPWSP ------ KNY GG GYR G NVTLR QA LAQ S R N IPAVR 358
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490535313 280 IGLDL G SENLQSM A YN FG ldkrvple I DTAKNYFPPI egkv AL aetsigq G KIL V T PL T MA LVASAV AN D G VIMK P YLM R 359
Cdd:TIGR02074 359 LLQEV G LDKVVAL A KR FG -------- I TSPLDPVLSL ---- AL ------- G TVE V S PL E MA SAYAVF AN G G KYVE P HGI R 419
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490535313 360 YVA D P i S G T VI EKST P SQY l NP IS KKV A DTIKQLMI G A V N dk E GTG KA A QI PG IT VAGKTGT AE N phg APH AWFVG F apa 439
Cdd:TIGR02074 420 KIV D R - D G K VI YENK P KTT - QV IS PAT A YIMTDMLK G V V E -- S GTG RS A RL PG RP VAGKTGT TQ N --- WRD AWFVG Y --- 489
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 490535313 440 e N P QI V VS V I V EN -------- G G E GG KV AAPI A RD IIRSY L 472
Cdd:TIGR02074 490 - T P YY V TA V W V GY ddkktlgk S G T GG GL AAPI W RD FMAEA L 529
PRK15105
PRK15105
peptidoglycan synthase FtsI; Provisional
81-463
1.16e-28
peptidoglycan synthase FtsI; Provisional
Pssm-ID: 185060 [Multi-domain]
Cd Length: 578
Bit Score: 119.15
E-value: 1.16e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490535313 81 K R E Y LD G PAF A QV IG YSR r IYQ QG NA G I EK AY D RE L L G MV G ND pii I L RK --------- LVLAKG Q VGD N VY L T ID KT LQ 151
Cdd:PRK15105 165 R R Y Y PS G EVT A HL IG FTN - VDS QG IE G V EK SF D KW L T G QP G ER --- I V RK drygrvied ISSTDS Q AAH N LA L S ID ER LQ 240
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490535313 152 D L A Y K E M ------- EGKK G AV V VLNPK TGE I LAM VST PSY D PN T L GENW K EI M T spdnvvl NRA TQGLYP PGS VF K IVTT 224
Cdd:PRK15105 241 A L V Y R E L nnavafn KAES G SA V LVDVN TGE V LAM ANS PSY N PN N L SGTP K DA M R ------- NRA ITDVFE PGS TV K PMVV 313
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490535313 225 AAV L TYEPELY N KTFDCKG Y I I v D G NR I N D FGGIAH ---- G I edfkqa FYR S C N SFFIQIG L DLG S EN L QSMAYN FGL D K 300
Cdd:PRK15105 314 MTA L QRGVVKE N SVLNTVP Y R I - N G HE I K D VARYSE ltlt G V ------ LQK S S N VGVSKLA L AMP S SA L VDTYSR FGL G K 386
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490535313 301 RVP L E - IDTAKNYF P PIE -- GKVAL A ET S I G Q G k IL VTPL TM A L V ASAVAND G v I MK P YLMRY V AD P IS G TVI ekstpsq 377
Cdd:PRK15105 387 ATN L G l VGERSGLY P QKQ rw SDIER A TF S F G Y G - LM VTPL QL A R V YATIGSY G - I YR P LSITK V DP P VP G ERV ------- 457
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490535313 378 YLNP I SKK V AD tikql M IGA V NDKE G T G KA A Q I P G ITV A G KTGTA EN -- P H G ---- APH A WFV G F APA EN P QIVVS V IVE 451
Cdd:PRK15105 458 FPES I VRT V VH ----- M MES V ALPG G G G VK A A I K G YRI A I KTGTA KK vg P D G ryin KYI A YTA G V APA SQ P RFALV V VIN 532
410
....*....|....*.
gi 490535313 452 N -- G G E -- GG K V A AP I 463
Cdd:PRK15105 533 D pq A G K yy GG A V S AP V 548
MrcA
COG5009
Membrane carboxypeptidase/penicillin-binding protein [Cell wall/membrane/envelope biogenesis];
163-472
9.03e-27
Membrane carboxypeptidase/penicillin-binding protein [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 444033 [Multi-domain]
Cd Length: 785
Bit Score: 114.10
E-value: 9.03e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490535313 163 GA V V V L N P K TG EI LA M V STPSYDPN tlgenwkeimtspdnv VL NRATQ GLYP PGS V FK - I V TT AA vltyepelynkt F D c 241
Cdd:COG5009 423 GA L V A L D P H TG AV LA L V GGFDFEQS ---------------- KF NRATQ AKRQ PGS S FK p F V YA AA ------------ L D - 473
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490535313 242 K GY ---- II V D ---------- G N -- R INDFG G IAH G IEDFKQ A FYR S C N SFFIQIGL D L G SENLQSM A YN FG LDKRV P le 305
Cdd:COG5009 474 N GY tpat II N D apivfddggg G G vw R PKNYS G KFY G PTTLRE A LEK S R N LVTVRLLQ D V G IDYVIDY A ER FG IYSKL P -- 551
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490535313 306 idtak NYFP piegk V AL aetsigq G KIL VTPL T MA LVASAV AN D G VIMK PYL MRYVA D P i S G T VI EKST P SQYLNP ---- 381
Cdd:COG5009 552 ----- PNLS ----- L AL ------- G SGE VTPL E MA RAYAVF AN G G YRVE PYL IDRIE D R - N G K VI YRAD P ARACED cdaa 613
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490535313 382 ---------------- I SKKV A DTIKQLMI G A V nd KE GTG KA A QIP G ITV AGKTGT AENPH gap H AWFVGF apae N P QI V 445
Cdd:COG5009 614 ewdgaeprlpdpaeqv I DPRT A YQMTSMLR G V V -- QR GTG RR A RAL G RDI AGKTGT TNDSK --- D AWFVGF ---- T P DL V 684
330 340 350
....*....|....*....|....*....|....*
gi 490535313 446 VS V I V -------- EN G GE GG KV A A PI AR D IIRSY L 472
Cdd:COG5009 685 AG V W V gfddprsl GR G ET GG RA A L PI WI D FMKAA L 719
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.21
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01