|
Name |
Accession |
Description |
Interval |
E-value |
| MPP_YvnB |
cd07399 |
Bacillus subtilis YvnB and related proteins, metallophosphatase domain; YvnB (BSU35040) is an ... |
344-641 |
2.14e-38 |
|
Bacillus subtilis YvnB and related proteins, metallophosphatase domain; YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Pssm-ID: 277344 [Multi-domain] Cd Length: 207 Bit Score: 143.40 E-value: 2.14e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 344 YTIAVFPDTQDYtsNDGIKHLFGDMTQWLVDNRQSHNIVFMSHVGDITQNNQSSEWDIAESALRKLD-GKLPYALLPGNH 422
Cdd:cd07399 1 FTLVWLPDTQYY--FELYPDILKAQTEWIVDERENKNIDFVFHTGDVTDHGVDKEWEVAAAAFNVLDdSGVPYSVLAGNH 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 423 DqgssgnaanhssdqldsrfsaakqaatnagtfggaydqeqaaarntystftapdgtkwLSISLEFGPRDDVIRWAGDVI 502
Cdd:cd07399 79 D----------------------------------------------------------LVLALGWGPSDEVLAWANEVL 100
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 503 EKFPDHRVMLATHsltsyagrqdnlalplydegagyDYGMRTDQRGA--NDGEYVARVLLSRYPNIVMTFSGHIFGDGAE 580
Cdd:cd07399 101 KKHPDRPAILNTH-----------------------EYMLSDDGRMPegNIGERIWDELVKKNPNVFMVLSGHYHPAGRT 157
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 490580359 581 TDITYNQYGEPVFQFLVNYQNgvsreitgngiesrGNNGGNGAIRLITIDPDNNRISTETY 641
Cdd:cd07399 158 TLVGDGDAGRDVHQMLANYQG--------------RPEGGQGYLRLLDFDVKKQKVDVKTY 204
|
|
| myxo_dep_M36 |
NF038112 |
myxosortase-dependent M36 family metallopeptidase; Members of this bacterial protein family ... |
1484-1782 |
6.34e-22 |
|
myxosortase-dependent M36 family metallopeptidase; Members of this bacterial protein family have an M36 family metallopeptidase domain, like fungalysin (see PF02128), and a C-terminal MYXO-CTERM domain (see TIGR03901), suggesting processing and surface-anchoring by the still-unknown putative transpeptidase, myxosortase. Members of this family include MXAN_3564 (mepA), part of the effector cargo of outer membrane vesicles that the species produces in large numbers during predation on other microbes.
Pssm-ID: 468355 [Multi-domain] Cd Length: 1597 Bit Score: 104.35 E-value: 6.34e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1484 VNRGPVAAADTLAAVDEDAAsflisfATLLANDKDADLDQLAVTGVSLvaGGTAVMEETGIRFT---TAADFNGTASFSY 1560
Cdd:NF038112 1279 VNRAPVAVAGAPATVDERST------VTLDGSGTDADGDALTYAWTQT--SGPAVTLTGATTATatfTAPEVTADTQLTF 1350
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1561 RITDGRGG-SSEATASFTVKPVNDAPVA---ASIAVKTDEDVVLKGkvVASDIDGDTLTFAIKADAGAAKGEVKIDAATG 1636
Cdd:NF038112 1351 TLTVSDGTaSATDTVTVTVRNVNRAPVAnagADQTVDERSTVTLSG--SATDPDGDALTYAWTQTAGPTVTLTGADTATA 1428
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1637 EWVyAPNANVNGTDSFTVVVSDGKRGSAESVVSVTINPVNDAPVA-VDDRITVSEKDNASFDlvANDTDVEGDRLTLISV 1715
Cdd:NF038112 1429 SFT-APEVAADTELTFQLTVSADGQASADVTVTVTVRNVNRAPVAhAGESITVDEGSTVTLD--ASATDPDGDTLTYAWT 1505
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 490580359 1716 AVA--AVTglaLTSEQAAAAfsvvdgklvvdpssAFAALEDDQQAVVTLTYSVRDANGGEAHGTTTVTV 1782
Cdd:NF038112 1506 QVAgpSVT---LTGADSAKL--------------TFTAPEVSADTTLTFSLTVTDGSGSSGPVVVTVTV 1557
|
|
| tand_rpt_95 |
NF012211 |
tandem-95 repeat; This 95-amino acid repeat occurs in tandem in proteins that may be several ... |
1606-1685 |
3.87e-19 |
|
tandem-95 repeat; This 95-amino acid repeat occurs in tandem in proteins that may be several thousand amino acids long.
Pssm-ID: 333740 [Multi-domain] Cd Length: 98 Bit Score: 84.22 E-value: 3.87e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1606 ASDIDGDTLTFAIKADAGAAKGEVkIDAATGEWVYAPNANVNGTDSFTVVVSDGKRGSAESVVSVTINPVNDAPVAVDDR 1685
Cdd:NF012211 19 ASDVDGDDLTVSNVSYSGPTNGTV-TDNGDGTYTYTPNENFNGDDSFTYTVSDGTGATATATVFVTVNPVNDAPVAGNDA 97
|
|
| COG2931 |
COG2931 |
Ca2+-binding protein, RTX toxin-related [Secondary metabolites biosynthesis, transport and ... |
1714-1964 |
7.00e-19 |
|
Ca2+-binding protein, RTX toxin-related [Secondary metabolites biosynthesis, transport and catabolism];
Pssm-ID: 442175 [Multi-domain] Cd Length: 252 Bit Score: 88.42 E-value: 7.00e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1714 SVAVAAVTGLALTSEQAAAAFSVVDGKLVVDPSSAFAALEDDQQAVVTLTYSVRDANGGEAHGTTTVTVDGYTEYTIVSG 1793
Cdd:COG2931 2 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGDGGGGGGGGGGGGGGGGLDGGGGGGGGDGGGG 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1794 TDGNDVLVAGDGKDMLEGGDGNDTLLAGAGNDMVDAGAGNDRVVAGDGNDIVEGGAGNDMLMGGAGNDVLHGGAGNDQLN 1873
Cdd:COG2931 82 GGGDDTDGGGDGGDGGGGGTGDDTGDGGGGNDTLTGGDGNDTLTGGAGDDTLYGGAGNDTLTGGAGNDTLYGGAGNDTLY 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1874 GGSGDDTLIGGAGNDVLTGGSGADTFVFAAGSGRDVVTDFQAGADGKDVVELSKDVFADYQAFIASGVFTDGDHGAEIAF 1953
Cdd:COG2931 162 GGAGNDTLDGGAGNDTLTGGAGNDTLTGGAGNDTLDGGGGDDTLGGGGGDDGLDGGDGDDGLGGGGGDDTLGGGGGGDGG 241
|
250
....*....|.
gi 490580359 1954 KDGSTITFDGV 1964
Cdd:COG2931 242 GGGGGDDGLGG 252
|
|
| Cadherin_5 |
pfam17892 |
Cadherin-like domain; |
1484-1578 |
1.80e-18 |
|
Cadherin-like domain;
Pssm-ID: 436123 [Multi-domain] Cd Length: 98 Bit Score: 82.24 E-value: 1.80e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1484 VNRGPVAAAD-TLAAVDEDAAsFLISFATLLANDKDADLDQLAVTGVSLVAG-GTAVMEETG-IRFTTAADFNGTASFSY 1560
Cdd:pfam17892 1 VNDAPVATGDvTLATGTEDTP-LTITAAQLLANATDVDGDTLSVTNLTADAGhGTVVDNGDGtYTFTPAANYNGPVSFTY 79
|
90
....*....|....*...
gi 490580359 1561 RITDGRGGSSEATASFTV 1578
Cdd:pfam17892 80 TVSDGHGGTTTATASLTV 97
|
|
| myxo_dep_M36 |
NF038112 |
myxosortase-dependent M36 family metallopeptidase; Members of this bacterial protein family ... |
1546-1795 |
8.07e-17 |
|
myxosortase-dependent M36 family metallopeptidase; Members of this bacterial protein family have an M36 family metallopeptidase domain, like fungalysin (see PF02128), and a C-terminal MYXO-CTERM domain (see TIGR03901), suggesting processing and surface-anchoring by the still-unknown putative transpeptidase, myxosortase. Members of this family include MXAN_3564 (mepA), part of the effector cargo of outer membrane vesicles that the species produces in large numbers during predation on other microbes.
Pssm-ID: 468355 [Multi-domain] Cd Length: 1597 Bit Score: 87.40 E-value: 8.07e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1546 FTTA-ADFNGTASFSYRITDGRGGSSEATASFTVKPVNDAPVAASIAVKT-DE--DVVLKGKvvASDIDGDTLTFAIKAD 1621
Cdd:NF038112 1243 FTAPeVTADTVLTFQLVVSDGTKTSAPDTVTVLVRNVNRAPVAVAGAPATvDErsTVTLDGS--GTDADGDALTYAWTQT 1320
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1622 AGAAKGEVKIDAATGEWVyAPNANVNGTDSFTVVVSDGKrGSAESVVSVTINPVNDAPVaVDDRITVSEKDNASFDLVAN 1701
Cdd:NF038112 1321 SGPAVTLTGATTATATFT-APEVTADTQLTFTLTVSDGT-ASATDTVTVTVRNVNRAPV-ANAGADQTVDERSTVTLSGS 1397
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1702 DTDVEGDRLTLISVAVAAvTGLALTSEQAA-AAFSVVDGKLVVDPSSAFAALEDDQQ-AVVTLTYSVRDANGG-EAHGTT 1778
Cdd:NF038112 1398 ATDPDGDALTYAWTQTAG-PTVTLTGADTAtASFTAPEVAADTELTFQLTVSADGQAsADVTVTVTVRNVNRApVAHAGE 1476
|
250
....*....|....*...
gi 490580359 1779 TVTVDGYTEYTIV-SGTD 1795
Cdd:NF038112 1477 SITVDEGSTVTLDaSATD 1494
|
|
| myxo_dep_M36 |
NF038112 |
myxosortase-dependent M36 family metallopeptidase; Members of this bacterial protein family ... |
1466-1679 |
2.26e-16 |
|
myxosortase-dependent M36 family metallopeptidase; Members of this bacterial protein family have an M36 family metallopeptidase domain, like fungalysin (see PF02128), and a C-terminal MYXO-CTERM domain (see TIGR03901), suggesting processing and surface-anchoring by the still-unknown putative transpeptidase, myxosortase. Members of this family include MXAN_3564 (mepA), part of the effector cargo of outer membrane vesicles that the species produces in large numbers during predation on other microbes.
Pssm-ID: 468355 [Multi-domain] Cd Length: 1597 Bit Score: 85.86 E-value: 2.26e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1466 VTFADGTLLNRDAI---VKGlVNRGPVAAADTLAAVDEDAAsflisfATLLANDKDADLD-------QLAVTGVSLVAGG 1535
Cdd:NF038112 1352 LTVSDGTASATDTVtvtVRN-VNRAPVANAGADQTVDERST------VTLSGSATDPDGDaltyawtQTAGPTVTLTGAD 1424
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1536 TAVMEETGIRFTTAADFngtaSFSYRITDGRGGSSEATASFTVKPVNDAPVA---ASIAVKTDEDVVLKGKvvASDIDGD 1612
Cdd:NF038112 1425 TATASFTAPEVAADTEL----TFQLTVSADGQASADVTVTVTVRNVNRAPVAhagESITVDEGSTVTLDAS--ATDPDGD 1498
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 490580359 1613 TLTFAIKADAGAAkgeVKIDAATGEWVY--APNANVNGTDSFTVVVSDGKRGSAESVVSVTINPVNDAP 1679
Cdd:NF038112 1499 TLTYAWTQVAGPS---VTLTGADSAKLTftAPEVSADTTLTFSLTVTDGSGSSGPVVVTVTVKNVNRAP 1564
|
|
| tand_rpt_95 |
NF012211 |
tandem-95 repeat; This 95-amino acid repeat occurs in tandem in proteins that may be several ... |
1498-1592 |
2.67e-16 |
|
tandem-95 repeat; This 95-amino acid repeat occurs in tandem in proteins that may be several thousand amino acids long.
Pssm-ID: 333740 [Multi-domain] Cd Length: 98 Bit Score: 76.13 E-value: 2.67e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1498 VDEDAaSFLISFATLLANDKDADLDQLAVTGVSLV--AGGTAVMEETG-IRFTTAADFNGTASFSYRITDGRGGSSEATA 1574
Cdd:NF012211 2 TDEDG-SITITQEQLLANASDVDGDDLTVSNVSYSgpTNGTVTDNGDGtYTYTPNENFNGDDSFTYTVSDGTGATATATV 80
|
90
....*....|....*...
gi 490580359 1575 SFTVKPVNDAPVAASIAV 1592
Cdd:NF012211 81 FVTVNPVNDAPVAGNDAF 98
|
|
| COG2931 |
COG2931 |
Ca2+-binding protein, RTX toxin-related [Secondary metabolites biosynthesis, transport and ... |
1261-1449 |
4.31e-16 |
|
Ca2+-binding protein, RTX toxin-related [Secondary metabolites biosynthesis, transport and catabolism];
Pssm-ID: 442175 [Multi-domain] Cd Length: 252 Bit Score: 80.34 E-value: 4.31e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1261 GDRELDAGTFGLYSWGNKGLAFDNLTVVNLKSGLEAGTTINGTEARDTLVGTDADETIFGHGGNDRLIGNAGNDRLAGGD 1340
Cdd:COG2931 58 GGGGGGGGGLDGGGGGGGGDGGGGGGGDDTDGGGDGGDGGGGGTGDDTGDGGGGNDTLTGGDGNDTLTGGAGDDTLYGGA 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1341 GNDVLMGGAGRDALSGGNGDDVLFGNEGNDIVSGGLGDDVIEGGTGNDLLLGGDGSDTYVYGRGDGSDDIVETAGATGDK 1420
Cdd:COG2931 138 GNDTLTGGAGNDTLYGGAGNDTLYGGAGNDTLDGGAGNDTLTGGAGNDTLTGGAGNDTLDGGGGDDTLGGGGGDDGLDGG 217
|
170 180
....*....|....*....|....*....
gi 490580359 1421 DVLVLHDIARNEAVLHKFGDNVEIEFGNG 1449
Cdd:COG2931 218 DGDDGLGGGGGDDTLGGGGGGDGGGGGGG 246
|
|
| Peptidase_M10_C |
pfam08548 |
Peptidase M10 serralysin C terminal; Serralysins are peptidases related to mammalian matrix ... |
1856-1927 |
1.04e-13 |
|
Peptidase M10 serralysin C terminal; Serralysins are peptidases related to mammalian matrix metallopeptidases (MMPs). The peptidase unit is found at the N terminal while this domain at the C terminal forms a corkscrew and is thought to be important for secretion of the protein through the bacterial cell wall. This domain contains the calcium ion binding domain pfam00353.
Pssm-ID: 430067 [Multi-domain] Cd Length: 222 Bit Score: 72.40 E-value: 1.04e-13
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 490580359 1856 GGAGNDVLHGGAGNDQLNGGSGDDTLIGGAGNDVLTGGSGADTFVFAAGS-----GRDVVTDFQAGADGKDVVELSK 1927
Cdd:pfam08548 86 GGSGNDVLIGNDADNILKGGAGNDILYGGGGADQLWGGAGNDIFVYASAKdsltaAPDTIRDFVSGIDKIDLSALNN 162
|
|
| myxo_dep_M36 |
NF038112 |
myxosortase-dependent M36 family metallopeptidase; Members of this bacterial protein family ... |
1582-1795 |
1.91e-10 |
|
myxosortase-dependent M36 family metallopeptidase; Members of this bacterial protein family have an M36 family metallopeptidase domain, like fungalysin (see PF02128), and a C-terminal MYXO-CTERM domain (see TIGR03901), suggesting processing and surface-anchoring by the still-unknown putative transpeptidase, myxosortase. Members of this family include MXAN_3564 (mepA), part of the effector cargo of outer membrane vesicles that the species produces in large numbers during predation on other microbes.
Pssm-ID: 468355 [Multi-domain] Cd Length: 1597 Bit Score: 66.60 E-value: 1.91e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1582 NDAPVA---ASIAVKTDEDVVLKGKVvASDIDGDTLTFAIKADAGAAKGEVKIDAATGEWVyAPNANVNGTDSFTVVVSD 1658
Cdd:NF038112 1185 NRRPVAnagPDQTVLERTTVTLNGSG-SFDPDGDPLTYAWTQVSGPAVTLTGADTATPSFT-APEVTADTVLTFQLVVSD 1262
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1659 GKRGSAESVVSVTINPVNDAPVA-------VDDRITVSekdnasfdLVANDTDVEGDRLTLISVAVAAVTgLALTSEQAA 1731
Cdd:NF038112 1263 GTKTSAPDTVTVLVRNVNRAPVAvagapatVDERSTVT--------LDGSGTDADGDALTYAWTQTSGPA-VTLTGATTA 1333
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 490580359 1732 -AAFSVVDGKLvvDPSSAFAALEDDQQAVV--TLTYSVRDANGGE-AHGTTTVTVDGYTEYTIV-SGTD 1795
Cdd:NF038112 1334 tATFTAPEVTA--DTQLTFTLTVSDGTASAtdTVTVTVRNVNRAPvANAGADQTVDERSTVTLSgSATD 1400
|
|
| Peptidase_M10_C |
pfam08548 |
Peptidase M10 serralysin C terminal; Serralysins are peptidases related to mammalian matrix ... |
1301-1407 |
1.41e-09 |
|
Peptidase M10 serralysin C terminal; Serralysins are peptidases related to mammalian matrix metallopeptidases (MMPs). The peptidase unit is found at the N terminal while this domain at the C terminal forms a corkscrew and is thought to be important for secretion of the protein through the bacterial cell wall. This domain contains the calcium ion binding domain pfam00353.
Pssm-ID: 430067 [Multi-domain] Cd Length: 222 Bit Score: 60.08 E-value: 1.41e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1301 NGTEARDTLVGTDADE----TIFGHGGND-----------RLIGNAGNDRLAGG-DGNDVLMGGAGRDALSGGNGDDVLF 1364
Cdd:pfam08548 15 NSNTGRDFYTATDASSklifSVWDAGGNDtfdfsgysqnqRINLNEGSFSDVGGlKGNVSIAHGVTIENAIGGSGNDVLI 94
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 490580359 1365 GNEGNDIVSGGLGDDVIEGGTGNDLLLGGDGSDTYVYGRGDGS 1407
Cdd:pfam08548 95 GNDADNILKGGAGNDILYGGGGADQLWGGAGNDIFVYASAKDS 137
|
|
| CpdA |
COG1409 |
3',5'-cyclic AMP phosphodiesterase CpdA [Signal transduction mechanisms]; |
344-574 |
3.88e-09 |
|
3',5'-cyclic AMP phosphodiesterase CpdA [Signal transduction mechanisms];
Pssm-ID: 441019 [Multi-domain] Cd Length: 234 Bit Score: 59.32 E-value: 3.88e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 344 YTIAVFPDTQdYTSNDGIKHLfgDMTQWLVDNRQSHNIVFMSHVGDITQNNQSSEWDIAESALRKLdgKLPYALLPGNHD 423
Cdd:COG1409 1 FRFAHISDLH-LGAPDGSDTA--EVLAAALADINAPRPDFVVVTGDLTDDGEPEEYAAAREILARL--GVPVYVVPGNHD 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 424 qgssgnaanhSSDQLDSRFSAAkqaatnagtFGGAYDQEqaaarnTYSTFTAP-------DGTKWLSISLEFGPRDdvIR 496
Cdd:COG1409 76 ----------IRAAMAEAYREY---------FGDLPPGG------LYYSFDYGgvrfiglDSNVPGRSSGELGPEQ--LA 128
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 490580359 497 WAGDVIEKFPDHRVMLATHsltsyagrqdnlaLPLYDEGAGydygmrTDQRGANDGEYVARvLLSRYpNIVMTFSGHI 574
Cdd:COG1409 129 WLEEELAAAPAKPVIVFLH-------------HPPYSTGSG------SDRIGLRNAEELLA-LLARY-GVDLVLSGHV 185
|
|
| 3keto-disac_hyd |
pfam06439 |
3-keto-disaccharide hydrolase; This family has structural similarity to an endo-1,3-1,4-beta ... |
1157-1287 |
5.04e-04 |
|
3-keto-disaccharide hydrolase; This family has structural similarity to an endo-1,3-1,4-beta glucanase belonging to glycoside hydrolase family 16. A member containing this domain, BT2157 from B. thetaiotaomicron, hydrolyses 3-ketotrehalose during trehalose degradation that proceeds through a 3-keto-glycoside intermediate. Other members containing this domain are involved in disaccharide catabolism with 3-ketoglycoside intermediates.
Pssm-ID: 399445 Cd Length: 182 Bit Score: 43.13 E-value: 5.04e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1157 WTDYAIETTFQTPDKDGLGFLFRYKDSKN---YYKLELD-ADGILDRTPSNGAGSIFNlvrmrngieEILAQVPGKYEPG 1232
Cdd:pfam06439 50 FGDFELHLEFKITPGGNSGVFFRSQPEEGqdfVKGYEVQiLDSGGDLGLNRGTGSLYG---------EIAPSANATFPPG 120
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 490580359 1233 QDTKLRVEVIGDKITAFLN-------EEALFAYPIGDRELDAGTFGLYSWGNKgLAFDNLTV 1287
Cdd:pfam06439 121 EWNTYEIIVKGNRITVWLNgvlvvdfTDPDPETGGGGEPLKSGPIGLQDHGGE-VRFRNIRI 181
|
|
| VCBS_repeat |
TIGR01965 |
VCBS repeat; This domain of about 100 residues is found multiple (up to 35) copies in long ... |
1602-1693 |
8.05e-04 |
|
VCBS repeat; This domain of about 100 residues is found multiple (up to 35) copies in long proteins from several species of Vibrio, Colwellia, Bradyrhizobium, and Shewanella (hence the name VCBS) and in smaller copy numbers in proteins from several other bacteria. The large protein size and repeat copy numbers, species distribution, and suggested activities of several member proteins suggests a role for this domain in adhesion.
Pssm-ID: 273899 [Multi-domain] Cd Length: 99 Bit Score: 40.40 E-value: 8.05e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1602 GKVVASDID-GDTLTFAIKADAGAAkGEVKIDAaTGEWVYAPN----------ANVNGTDSFTVVVSDGkrgsAESVVSV 1670
Cdd:TIGR01965 2 GQLTISDADaGQAHFIAQTDAAGQY-GTFSIDA-DGQWTYQADnsqtavqalkAGETLTDTFTVTSADG----TSQTVTI 75
|
90 100
....*....|....*....|....
gi 490580359 1671 TINPVNDAPV-AVDDRITVSEKDN 1693
Cdd:TIGR01965 76 TITGANDAAViGGADTGSVTEDST 99
|
|
| tand_rpt_95 |
NF012211 |
tandem-95 repeat; This 95-amino acid repeat occurs in tandem in proteins that may be several ... |
1683-1782 |
3.87e-03 |
|
tandem-95 repeat; This 95-amino acid repeat occurs in tandem in proteins that may be several thousand amino acids long.
Pssm-ID: 333740 [Multi-domain] Cd Length: 98 Bit Score: 38.76 E-value: 3.87e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1683 DDRITVSEKDnasfdLVANDTDVEGDRLTLISVavaavtglaLTSEQAAAAFSVV-DGKLVVDPSSAFAaleddqqAVVT 1761
Cdd:NF012211 5 DGSITITQEQ-----LLANASDVDGDDLTVSNV---------SYSGPTNGTVTDNgDGTYTYTPNENFN-------GDDS 63
|
90 100
....*....|....*....|.
gi 490580359 1762 LTYSVRDANGGEAHGTTTVTV 1782
Cdd:NF012211 64 FTYTVSDGTGATATATVFVTV 84
|
|
| COG4625 |
COG4625 |
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function ... |
1459-1911 |
4.77e-03 |
|
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function unknown];
Pssm-ID: 443664 [Multi-domain] Cd Length: 900 Bit Score: 42.07 E-value: 4.77e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1459 AGGGLELVTFADGTLLNRDAIVKGLVNRGPVAAADTLAAVDEDAASFLISFATLLANDKDADLDQLAVTGVSLVAGGTAV 1538
Cdd:COG4625 67 GGGGGGGAGGGGGGGGGGGGGGGTGGVGGGGGGGGGGGGGGGGGGGGGGGGSAGGGGGGAGGAGGGGGGGAGGGGGGGGG 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1539 MEETGIRFTTAADFNGTASFSYRITDGRGGSSEATASFTVKPVNDAPVAASIAVKTDEDVVLKGKVVASDIDGDTLTFAI 1618
Cdd:COG4625 147 GGAGGGGGGGAGGAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGNGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGGGG 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1619 KADAGAAKGEVKIDAATGEWVYAPNANVNGTDSFTVVVSDGKRGSAESVVSVTINPVNDAPVAVDDRITVSEKDNASFDL 1698
Cdd:COG4625 227 GGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGNGGGGGAGGGGGGGGGGSGGGGGGGGGGGSGGGGGGGGGGGGGGGGGGG 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1699 VANDTDVEGDRLTLISVAVAAVTGLALTSEQAAAAFSVVDGKLVVDPSSAFAALEDDQQAVVTLTYSVRDANGGEAHGTT 1778
Cdd:COG4625 307 GGGGGGGGGGGGGGGGGGGGGGGGGGGAGGGGGSGGAGAGGGGAGGGGAGGGGGGGTGGGGGGGGGGGGGSGGGGAGGGG 386
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1779 TVTVDGYTEYTIVSGTDGNDVLVAGDGKDMLEGGDGNDTLLAGAGNDMVDAGAGNDRVVAGDGNDIVEGGAGNDMLMGGA 1858
Cdd:COG4625 387 GSGGGGGGGAGGGGGGGGAGGTGGGGAGGGGGAAGGGGGGTGAGGGGGGGGTGAGGGGATGGGGGGGGGAGGSGGGAGAG 466
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 490580359 1859 GNDVLHGGAGNDQLNGGSGDDTLIGGAGNDVLTGGSGADTFVFAAGSGRDVVT 1911
Cdd:COG4625 467 GGSGSGAGTLTLTGNNTYTGTTTVNGGGNYTQSAGSTLAVEVDAANSDRLVVT 519
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| MPP_YvnB |
cd07399 |
Bacillus subtilis YvnB and related proteins, metallophosphatase domain; YvnB (BSU35040) is an ... |
344-641 |
2.14e-38 |
|
Bacillus subtilis YvnB and related proteins, metallophosphatase domain; YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Pssm-ID: 277344 [Multi-domain] Cd Length: 207 Bit Score: 143.40 E-value: 2.14e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 344 YTIAVFPDTQDYtsNDGIKHLFGDMTQWLVDNRQSHNIVFMSHVGDITQNNQSSEWDIAESALRKLD-GKLPYALLPGNH 422
Cdd:cd07399 1 FTLVWLPDTQYY--FELYPDILKAQTEWIVDERENKNIDFVFHTGDVTDHGVDKEWEVAAAAFNVLDdSGVPYSVLAGNH 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 423 DqgssgnaanhssdqldsrfsaakqaatnagtfggaydqeqaaarntystftapdgtkwLSISLEFGPRDDVIRWAGDVI 502
Cdd:cd07399 79 D----------------------------------------------------------LVLALGWGPSDEVLAWANEVL 100
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 503 EKFPDHRVMLATHsltsyagrqdnlalplydegagyDYGMRTDQRGA--NDGEYVARVLLSRYPNIVMTFSGHIFGDGAE 580
Cdd:cd07399 101 KKHPDRPAILNTH-----------------------EYMLSDDGRMPegNIGERIWDELVKKNPNVFMVLSGHYHPAGRT 157
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 490580359 581 TDITYNQYGEPVFQFLVNYQNgvsreitgngiesrGNNGGNGAIRLITIDPDNNRISTETY 641
Cdd:cd07399 158 TLVGDGDAGRDVHQMLANYQG--------------RPEGGQGYLRLLDFDVKKQKVDVKTY 204
|
|
| myxo_dep_M36 |
NF038112 |
myxosortase-dependent M36 family metallopeptidase; Members of this bacterial protein family ... |
1484-1782 |
6.34e-22 |
|
myxosortase-dependent M36 family metallopeptidase; Members of this bacterial protein family have an M36 family metallopeptidase domain, like fungalysin (see PF02128), and a C-terminal MYXO-CTERM domain (see TIGR03901), suggesting processing and surface-anchoring by the still-unknown putative transpeptidase, myxosortase. Members of this family include MXAN_3564 (mepA), part of the effector cargo of outer membrane vesicles that the species produces in large numbers during predation on other microbes.
Pssm-ID: 468355 [Multi-domain] Cd Length: 1597 Bit Score: 104.35 E-value: 6.34e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1484 VNRGPVAAADTLAAVDEDAAsflisfATLLANDKDADLDQLAVTGVSLvaGGTAVMEETGIRFT---TAADFNGTASFSY 1560
Cdd:NF038112 1279 VNRAPVAVAGAPATVDERST------VTLDGSGTDADGDALTYAWTQT--SGPAVTLTGATTATatfTAPEVTADTQLTF 1350
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1561 RITDGRGG-SSEATASFTVKPVNDAPVA---ASIAVKTDEDVVLKGkvVASDIDGDTLTFAIKADAGAAKGEVKIDAATG 1636
Cdd:NF038112 1351 TLTVSDGTaSATDTVTVTVRNVNRAPVAnagADQTVDERSTVTLSG--SATDPDGDALTYAWTQTAGPTVTLTGADTATA 1428
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1637 EWVyAPNANVNGTDSFTVVVSDGKRGSAESVVSVTINPVNDAPVA-VDDRITVSEKDNASFDlvANDTDVEGDRLTLISV 1715
Cdd:NF038112 1429 SFT-APEVAADTELTFQLTVSADGQASADVTVTVTVRNVNRAPVAhAGESITVDEGSTVTLD--ASATDPDGDTLTYAWT 1505
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 490580359 1716 AVA--AVTglaLTSEQAAAAfsvvdgklvvdpssAFAALEDDQQAVVTLTYSVRDANGGEAHGTTTVTV 1782
Cdd:NF038112 1506 QVAgpSVT---LTGADSAKL--------------TFTAPEVSADTTLTFSLTVTDGSGSSGPVVVTVTV 1557
|
|
| tand_rpt_95 |
NF012211 |
tandem-95 repeat; This 95-amino acid repeat occurs in tandem in proteins that may be several ... |
1606-1685 |
3.87e-19 |
|
tandem-95 repeat; This 95-amino acid repeat occurs in tandem in proteins that may be several thousand amino acids long.
Pssm-ID: 333740 [Multi-domain] Cd Length: 98 Bit Score: 84.22 E-value: 3.87e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1606 ASDIDGDTLTFAIKADAGAAKGEVkIDAATGEWVYAPNANVNGTDSFTVVVSDGKRGSAESVVSVTINPVNDAPVAVDDR 1685
Cdd:NF012211 19 ASDVDGDDLTVSNVSYSGPTNGTV-TDNGDGTYTYTPNENFNGDDSFTYTVSDGTGATATATVFVTVNPVNDAPVAGNDA 97
|
|
| COG2931 |
COG2931 |
Ca2+-binding protein, RTX toxin-related [Secondary metabolites biosynthesis, transport and ... |
1714-1964 |
7.00e-19 |
|
Ca2+-binding protein, RTX toxin-related [Secondary metabolites biosynthesis, transport and catabolism];
Pssm-ID: 442175 [Multi-domain] Cd Length: 252 Bit Score: 88.42 E-value: 7.00e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1714 SVAVAAVTGLALTSEQAAAAFSVVDGKLVVDPSSAFAALEDDQQAVVTLTYSVRDANGGEAHGTTTVTVDGYTEYTIVSG 1793
Cdd:COG2931 2 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGDGGGGGGGGGGGGGGGGLDGGGGGGGGDGGGG 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1794 TDGNDVLVAGDGKDMLEGGDGNDTLLAGAGNDMVDAGAGNDRVVAGDGNDIVEGGAGNDMLMGGAGNDVLHGGAGNDQLN 1873
Cdd:COG2931 82 GGGDDTDGGGDGGDGGGGGTGDDTGDGGGGNDTLTGGDGNDTLTGGAGDDTLYGGAGNDTLTGGAGNDTLYGGAGNDTLY 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1874 GGSGDDTLIGGAGNDVLTGGSGADTFVFAAGSGRDVVTDFQAGADGKDVVELSKDVFADYQAFIASGVFTDGDHGAEIAF 1953
Cdd:COG2931 162 GGAGNDTLDGGAGNDTLTGGAGNDTLTGGAGNDTLDGGGGDDTLGGGGGDDGLDGGDGDDGLGGGGGDDTLGGGGGGDGG 241
|
250
....*....|.
gi 490580359 1954 KDGSTITFDGV 1964
Cdd:COG2931 242 GGGGGDDGLGG 252
|
|
| COG2931 |
COG2931 |
Ca2+-binding protein, RTX toxin-related [Secondary metabolites biosynthesis, transport and ... |
1695-1946 |
8.87e-19 |
|
Ca2+-binding protein, RTX toxin-related [Secondary metabolites biosynthesis, transport and catabolism];
Pssm-ID: 442175 [Multi-domain] Cd Length: 252 Bit Score: 88.04 E-value: 8.87e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1695 SFDLVANDTDVEGDRLTLISVAVAAVTGLALTSEQAAAAFSVVDGKLVVDPSSAFAALEDDQQAVVTLTYSVRDANGGEA 1774
Cdd:COG2931 1 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGDGGGGGGGGGGGGGGGGLDGGGGGGGGDGGG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1775 HGTTTVTVDGYTEYTIVSGTDGNDVLVAGDGKDMLEGGDGNDTLLAGAGNDMVDAGAGNDRVVAGDGNDIVEGGAGNDML 1854
Cdd:COG2931 81 GGGGDDTDGGGDGGDGGGGGTGDDTGDGGGGNDTLTGGDGNDTLTGGAGDDTLYGGAGNDTLTGGAGNDTLYGGAGNDTL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1855 MGGAGNDVLHGGAGNDQLNGGSGDDTLIGGAGNDVLTGGSGADTFVFAAGSGRDVVTDFQAGADGKDVVELSKDVFADYQ 1934
Cdd:COG2931 161 YGGAGNDTLDGGAGNDTLTGGAGNDTLTGGAGNDTLDGGGGDDTLGGGGGDDGLDGGDGDDGLGGGGGDDTLGGGGGGDG 240
|
250
....*....|..
gi 490580359 1935 AFIASGVFTDGD 1946
Cdd:COG2931 241 GGGGGGDDGLGG 252
|
|
| COG2931 |
COG2931 |
Ca2+-binding protein, RTX toxin-related [Secondary metabolites biosynthesis, transport and ... |
1692-1921 |
8.95e-19 |
|
Ca2+-binding protein, RTX toxin-related [Secondary metabolites biosynthesis, transport and catabolism];
Pssm-ID: 442175 [Multi-domain] Cd Length: 252 Bit Score: 88.04 E-value: 8.95e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1692 DNASFDLVANDTDVEGDRLTLISVAVAAVTGLALTSEQAAAAFSVVDGKLVVDPSSAFAALEDDQQAVVTLTYSVRDANG 1771
Cdd:COG2931 16 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGDGGGGGGGGGGGGGGGGLDGGGGGGGGDGGGGGGGDDTDGGGDGGD 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1772 GEAHGTTTVTVDGYTEYTIVSGTDGNDVLVAGDGKDMLEGGDGNDTLLAGAGNDMVDAGAGNDRVVAGDGNDIVEGGAGN 1851
Cdd:COG2931 96 GGGGGTGDDTGDGGGGNDTLTGGDGNDTLTGGAGDDTLYGGAGNDTLTGGAGNDTLYGGAGNDTLYGGAGNDTLDGGAGN 175
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1852 DMLMGGAGNDVLHGGAGNDQLNGGSGDDTLIGGAGNDVLTGGSGADTFVFAAGSGRDVVTDFQAGADGKD 1921
Cdd:COG2931 176 DTLTGGAGNDTLTGGAGNDTLDGGGGDDTLGGGGGDDGLDGGDGDDGLGGGGGDDTLGGGGGGDGGGGGG 245
|
|
| COG2931 |
COG2931 |
Ca2+-binding protein, RTX toxin-related [Secondary metabolites biosynthesis, transport and ... |
1704-1949 |
1.79e-18 |
|
Ca2+-binding protein, RTX toxin-related [Secondary metabolites biosynthesis, transport and catabolism];
Pssm-ID: 442175 [Multi-domain] Cd Length: 252 Bit Score: 87.27 E-value: 1.79e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1704 DVEGDRLTLISVAVAAVTGLALTSEQAAAAFSVVDGKLVVDPSSAFAALEDDQQAVVTLTYSVRDANGGEAHGTTTVTVD 1783
Cdd:COG2931 1 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGDGGGGGGGGGGGGGGGGLDGGGGGGGGDGGG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1784 GYTEYTIVSGTDGNDVLVAGDGKDMLEGGDGNDTLLAGAGNDMVDAGAGNDRVVAGDGNDIVEGGAGNDMLMGGAGNDVL 1863
Cdd:COG2931 81 GGGGDDTDGGGDGGDGGGGGTGDDTGDGGGGNDTLTGGDGNDTLTGGAGDDTLYGGAGNDTLTGGAGNDTLYGGAGNDTL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1864 HGGAGNDQLNGGSGDDTLIGGAGNDVLTGGSGADTFVFAAGSGRDVVTDFQAGADGKDVVELSKDVFADYQAFIASGVFT 1943
Cdd:COG2931 161 YGGAGNDTLDGGAGNDTLTGGAGNDTLTGGAGNDTLDGGGGDDTLGGGGGDDGLDGGDGDDGLGGGGGDDTLGGGGGGDG 240
|
....*.
gi 490580359 1944 DGDHGA 1949
Cdd:COG2931 241 GGGGGG 246
|
|
| Cadherin_5 |
pfam17892 |
Cadherin-like domain; |
1484-1578 |
1.80e-18 |
|
Cadherin-like domain;
Pssm-ID: 436123 [Multi-domain] Cd Length: 98 Bit Score: 82.24 E-value: 1.80e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1484 VNRGPVAAAD-TLAAVDEDAAsFLISFATLLANDKDADLDQLAVTGVSLVAG-GTAVMEETG-IRFTTAADFNGTASFSY 1560
Cdd:pfam17892 1 VNDAPVATGDvTLATGTEDTP-LTITAAQLLANATDVDGDTLSVTNLTADAGhGTVVDNGDGtYTFTPAANYNGPVSFTY 79
|
90
....*....|....*...
gi 490580359 1561 RITDGRGGSSEATASFTV 1578
Cdd:pfam17892 80 TVSDGHGGTTTATASLTV 97
|
|
| COG2931 |
COG2931 |
Ca2+-binding protein, RTX toxin-related [Secondary metabolites biosynthesis, transport and ... |
1692-1919 |
3.27e-18 |
|
Ca2+-binding protein, RTX toxin-related [Secondary metabolites biosynthesis, transport and catabolism];
Pssm-ID: 442175 [Multi-domain] Cd Length: 252 Bit Score: 86.50 E-value: 3.27e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1692 DNASFDLVANDTDVEGDRLTLISVAVAAVTGLALTSEQAAAAFSVVDGKLVVDPSSAFAALEDDQQAVVTLTYSVRDANG 1771
Cdd:COG2931 7 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGDGGGGGGGGGGGGGGGGLDGGGGGGGGDGGGGGGGDD 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1772 GEAHGTTTVTVDGYTEYTIVSGTDGNDVLVAGDGKDMLEGGDGNDTLLAGAGNDMVDAGAGNDRVVAGDGNDIVEGGAGN 1851
Cdd:COG2931 87 TDGGGDGGDGGGGGTGDDTGDGGGGNDTLTGGDGNDTLTGGAGDDTLYGGAGNDTLTGGAGNDTLYGGAGNDTLYGGAGN 166
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 490580359 1852 DMLMGGAGNDVLHGGAGNDQLNGGSGDDTLIGGAGNDVLTGGSGADTFVFAAGSGRDVVTDFQAGADG 1919
Cdd:COG2931 167 DTLDGGAGNDTLTGGAGNDTLTGGAGNDTLDGGGGDDTLGGGGGDDGLDGGDGDDGLGGGGGDDTLGG 234
|
|
| myxo_dep_M36 |
NF038112 |
myxosortase-dependent M36 family metallopeptidase; Members of this bacterial protein family ... |
1546-1795 |
8.07e-17 |
|
myxosortase-dependent M36 family metallopeptidase; Members of this bacterial protein family have an M36 family metallopeptidase domain, like fungalysin (see PF02128), and a C-terminal MYXO-CTERM domain (see TIGR03901), suggesting processing and surface-anchoring by the still-unknown putative transpeptidase, myxosortase. Members of this family include MXAN_3564 (mepA), part of the effector cargo of outer membrane vesicles that the species produces in large numbers during predation on other microbes.
Pssm-ID: 468355 [Multi-domain] Cd Length: 1597 Bit Score: 87.40 E-value: 8.07e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1546 FTTA-ADFNGTASFSYRITDGRGGSSEATASFTVKPVNDAPVAASIAVKT-DE--DVVLKGKvvASDIDGDTLTFAIKAD 1621
Cdd:NF038112 1243 FTAPeVTADTVLTFQLVVSDGTKTSAPDTVTVLVRNVNRAPVAVAGAPATvDErsTVTLDGS--GTDADGDALTYAWTQT 1320
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1622 AGAAKGEVKIDAATGEWVyAPNANVNGTDSFTVVVSDGKrGSAESVVSVTINPVNDAPVaVDDRITVSEKDNASFDLVAN 1701
Cdd:NF038112 1321 SGPAVTLTGATTATATFT-APEVTADTQLTFTLTVSDGT-ASATDTVTVTVRNVNRAPV-ANAGADQTVDERSTVTLSGS 1397
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1702 DTDVEGDRLTLISVAVAAvTGLALTSEQAA-AAFSVVDGKLVVDPSSAFAALEDDQQ-AVVTLTYSVRDANGG-EAHGTT 1778
Cdd:NF038112 1398 ATDPDGDALTYAWTQTAG-PTVTLTGADTAtASFTAPEVAADTELTFQLTVSADGQAsADVTVTVTVRNVNRApVAHAGE 1476
|
250
....*....|....*...
gi 490580359 1779 TVTVDGYTEYTIV-SGTD 1795
Cdd:NF038112 1477 SITVDEGSTVTLDaSATD 1494
|
|
| Big_9 |
pfam17963 |
Bacterial Ig domain; This entry represents a wide variety of bacterial Ig domains. |
1571-1660 |
1.36e-16 |
|
Bacterial Ig domain; This entry represents a wide variety of bacterial Ig domains.
Pssm-ID: 465590 [Multi-domain] Cd Length: 90 Bit Score: 76.61 E-value: 1.36e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1571 EATASFTVKPVNDAPVAASIAVKTDEDVVLkgkVVASDIDGDTLT---FAIKADAGAAKGEVKIDAaTGEWVYAPNANVN 1647
Cdd:pfam17963 1 TATVTVTVTPVNDAPVAVDDSVTVTEDTVL---ANDSDPDGDPLTitsLTVTIVTAPANGTVTVNA-DGTLTYTPNAGFS 76
|
90
....*....|...
gi 490580359 1648 GTDSFTVVVSDGK 1660
Cdd:pfam17963 77 GTDSFTYTVSDGS 89
|
|
| myxo_dep_M36 |
NF038112 |
myxosortase-dependent M36 family metallopeptidase; Members of this bacterial protein family ... |
1466-1679 |
2.26e-16 |
|
myxosortase-dependent M36 family metallopeptidase; Members of this bacterial protein family have an M36 family metallopeptidase domain, like fungalysin (see PF02128), and a C-terminal MYXO-CTERM domain (see TIGR03901), suggesting processing and surface-anchoring by the still-unknown putative transpeptidase, myxosortase. Members of this family include MXAN_3564 (mepA), part of the effector cargo of outer membrane vesicles that the species produces in large numbers during predation on other microbes.
Pssm-ID: 468355 [Multi-domain] Cd Length: 1597 Bit Score: 85.86 E-value: 2.26e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1466 VTFADGTLLNRDAI---VKGlVNRGPVAAADTLAAVDEDAAsflisfATLLANDKDADLD-------QLAVTGVSLVAGG 1535
Cdd:NF038112 1352 LTVSDGTASATDTVtvtVRN-VNRAPVANAGADQTVDERST------VTLSGSATDPDGDaltyawtQTAGPTVTLTGAD 1424
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1536 TAVMEETGIRFTTAADFngtaSFSYRITDGRGGSSEATASFTVKPVNDAPVA---ASIAVKTDEDVVLKGKvvASDIDGD 1612
Cdd:NF038112 1425 TATASFTAPEVAADTEL----TFQLTVSADGQASADVTVTVTVRNVNRAPVAhagESITVDEGSTVTLDAS--ATDPDGD 1498
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 490580359 1613 TLTFAIKADAGAAkgeVKIDAATGEWVY--APNANVNGTDSFTVVVSDGKRGSAESVVSVTINPVNDAP 1679
Cdd:NF038112 1499 TLTYAWTQVAGPS---VTLTGADSAKLTftAPEVSADTTLTFSLTVTDGSGSSGPVVVTVTVKNVNRAP 1564
|
|
| COG2931 |
COG2931 |
Ca2+-binding protein, RTX toxin-related [Secondary metabolites biosynthesis, transport and ... |
1669-1919 |
2.52e-16 |
|
Ca2+-binding protein, RTX toxin-related [Secondary metabolites biosynthesis, transport and catabolism];
Pssm-ID: 442175 [Multi-domain] Cd Length: 252 Bit Score: 80.72 E-value: 2.52e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1669 SVTINPVNDAPVAVDDRITVSEKDNASFDLVANDTDVEGDRLTLISVAVAAVTGLALTSEQAAAAFSVVDGKLVVDPSSA 1748
Cdd:COG2931 2 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGDGGGGGGGGGGGGGGGGLDGGGGGGGGDGGGG 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1749 FAALEDDQQAVVTLTYSVRDANGGEAHGTTTVTVDGYTEYTIVSGTDGNDVLVAGDGKDMLEGGDGNDTLLAGAGNDMVD 1828
Cdd:COG2931 82 GGGDDTDGGGDGGDGGGGGTGDDTGDGGGGNDTLTGGDGNDTLTGGAGDDTLYGGAGNDTLTGGAGNDTLYGGAGNDTLY 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1829 AGAGNDRVVAGDGNDIVEGGAGNDMLMGGAGNDVLHGGAGNDQLNGGSGDDTLIGGAGNDVLTGGSGADTFVFAAGSGRD 1908
Cdd:COG2931 162 GGAGNDTLDGGAGNDTLTGGAGNDTLTGGAGNDTLDGGGGDDTLGGGGGDDGLDGGDGDDGLGGGGGDDTLGGGGGGDGG 241
|
250
....*....|.
gi 490580359 1909 VVTDFQAGADG 1919
Cdd:COG2931 242 GGGGGDDGLGG 252
|
|
| tand_rpt_95 |
NF012211 |
tandem-95 repeat; This 95-amino acid repeat occurs in tandem in proteins that may be several ... |
1498-1592 |
2.67e-16 |
|
tandem-95 repeat; This 95-amino acid repeat occurs in tandem in proteins that may be several thousand amino acids long.
Pssm-ID: 333740 [Multi-domain] Cd Length: 98 Bit Score: 76.13 E-value: 2.67e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1498 VDEDAaSFLISFATLLANDKDADLDQLAVTGVSLV--AGGTAVMEETG-IRFTTAADFNGTASFSYRITDGRGGSSEATA 1574
Cdd:NF012211 2 TDEDG-SITITQEQLLANASDVDGDDLTVSNVSYSgpTNGTVTDNGDGtYTYTPNENFNGDDSFTYTVSDGTGATATATV 80
|
90
....*....|....*...
gi 490580359 1575 SFTVKPVNDAPVAASIAV 1592
Cdd:NF012211 81 FVTVNPVNDAPVAGNDAF 98
|
|
| COG2931 |
COG2931 |
Ca2+-binding protein, RTX toxin-related [Secondary metabolites biosynthesis, transport and ... |
1730-1973 |
2.85e-16 |
|
Ca2+-binding protein, RTX toxin-related [Secondary metabolites biosynthesis, transport and catabolism];
Pssm-ID: 442175 [Multi-domain] Cd Length: 252 Bit Score: 80.72 E-value: 2.85e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1730 AAAAFSVVDGKLVVDPSSAFAALEDDQQAVVTLTYSVRDANGGEAHGTTTVTVDGYTEYTIVSGTDGNDVLVAGDGKDML 1809
Cdd:COG2931 9 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGDGGGGGGGGGGGGGGGGLDGGGGGGGGDGGGGGGGDDTD 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1810 EGGDGNDTLLAGAGNDMVDAGAGNDRVVAGDGNDIVEGGAGNDMLMGGAGNDVLHGGAGNDQLNGGSGDDTLIGGAGNDV 1889
Cdd:COG2931 89 GGGDGGDGGGGGTGDDTGDGGGGNDTLTGGDGNDTLTGGAGDDTLYGGAGNDTLTGGAGNDTLYGGAGNDTLYGGAGNDT 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1890 LTGGSGADTFVFAAGSGRDVVTDFQAGADGKDVVELSKDVFADYQAFIASGVFTDGDHGAEIAFKDGSTITFDGVKTEQF 1969
Cdd:COG2931 169 LDGGAGNDTLTGGAGNDTLTGGAGNDTLDGGGGDDTLGGGGGDDGLDGGDGDDGLGGGGGDDTLGGGGGGDGGGGGGGDD 248
|
....
gi 490580359 1970 VIDD 1973
Cdd:COG2931 249 GLGG 252
|
|
| COG2931 |
COG2931 |
Ca2+-binding protein, RTX toxin-related [Secondary metabolites biosynthesis, transport and ... |
1261-1449 |
4.31e-16 |
|
Ca2+-binding protein, RTX toxin-related [Secondary metabolites biosynthesis, transport and catabolism];
Pssm-ID: 442175 [Multi-domain] Cd Length: 252 Bit Score: 80.34 E-value: 4.31e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1261 GDRELDAGTFGLYSWGNKGLAFDNLTVVNLKSGLEAGTTINGTEARDTLVGTDADETIFGHGGNDRLIGNAGNDRLAGGD 1340
Cdd:COG2931 58 GGGGGGGGGLDGGGGGGGGDGGGGGGGDDTDGGGDGGDGGGGGTGDDTGDGGGGNDTLTGGDGNDTLTGGAGDDTLYGGA 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1341 GNDVLMGGAGRDALSGGNGDDVLFGNEGNDIVSGGLGDDVIEGGTGNDLLLGGDGSDTYVYGRGDGSDDIVETAGATGDK 1420
Cdd:COG2931 138 GNDTLTGGAGNDTLYGGAGNDTLYGGAGNDTLDGGAGNDTLTGGAGNDTLTGGAGNDTLDGGGGDDTLGGGGGDDGLDGG 217
|
170 180
....*....|....*....|....*....
gi 490580359 1421 DVLVLHDIARNEAVLHKFGDNVEIEFGNG 1449
Cdd:COG2931 218 DGDDGLGGGGGDDTLGGGGGGDGGGGGGG 246
|
|
| COG2931 |
COG2931 |
Ca2+-binding protein, RTX toxin-related [Secondary metabolites biosynthesis, transport and ... |
1241-1419 |
2.97e-15 |
|
Ca2+-binding protein, RTX toxin-related [Secondary metabolites biosynthesis, transport and catabolism];
Pssm-ID: 442175 [Multi-domain] Cd Length: 252 Bit Score: 77.64 E-value: 2.97e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1241 VIGDKITAFLNEEALFAYPIGDRELDAGTFGLYSWGNKGLAFDNLTVVNLKSGLEAGTTINGTEARDTLVGTDADETIFG 1320
Cdd:COG2931 47 GGGDGGGGGGGGGGGGGGGGLDGGGGGGGGDGGGGGGGDDTDGGGDGGDGGGGGTGDDTGDGGGGNDTLTGGDGNDTLTG 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1321 HGGNDRLIGNAGNDRLAGGDGNDVLMGGAGRDALSGGNGDDVLFGNEGNDIVSGGLGDDVIEGGTGNDLLLGGDGSDTYV 1400
Cdd:COG2931 127 GAGDDTLYGGAGNDTLTGGAGNDTLYGGAGNDTLYGGAGNDTLDGGAGNDTLTGGAGNDTLTGGAGNDTLDGGGGDDTLG 206
|
170
....*....|....*....
gi 490580359 1401 YGRGDGSDDIVETAGATGD 1419
Cdd:COG2931 207 GGGGDDGLDGGDGDDGLGG 225
|
|
| COG2931 |
COG2931 |
Ca2+-binding protein, RTX toxin-related [Secondary metabolites biosynthesis, transport and ... |
1260-1449 |
3.20e-14 |
|
Ca2+-binding protein, RTX toxin-related [Secondary metabolites biosynthesis, transport and catabolism];
Pssm-ID: 442175 [Multi-domain] Cd Length: 252 Bit Score: 74.56 E-value: 3.20e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1260 IGDRELDAGTFGLYSWGNKGLAFDNLTVVNLKSGLEAGTTINGTEARDTLVGTDADETIFGHGGNDRLIGNAGNDRLAGG 1339
Cdd:COG2931 48 GGDGGGGGGGGGGGGGGGGLDGGGGGGGGDGGGGGGGDDTDGGGDGGDGGGGGTGDDTGDGGGGNDTLTGGDGNDTLTGG 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1340 DGNDVLMGGAGRDALSGGNGDDVLFGNEGNDIVSGGLGDDVIEGGTGNDLLLGGDGSDTYVYGRGDGSDDIVETAGATGD 1419
Cdd:COG2931 128 AGDDTLYGGAGNDTLTGGAGNDTLYGGAGNDTLYGGAGNDTLDGGAGNDTLTGGAGNDTLTGGAGNDTLDGGGGDDTLGG 207
|
170 180 190
....*....|....*....|....*....|
gi 490580359 1420 KDVLVLHDIARNEAVLHKFGDNVEIEFGNG 1449
Cdd:COG2931 208 GGGDDGLDGGDGDDGLGGGGGDDTLGGGGG 237
|
|
| COG2931 |
COG2931 |
Ca2+-binding protein, RTX toxin-related [Secondary metabolites biosynthesis, transport and ... |
1667-1906 |
3.58e-14 |
|
Ca2+-binding protein, RTX toxin-related [Secondary metabolites biosynthesis, transport and catabolism];
Pssm-ID: 442175 [Multi-domain] Cd Length: 252 Bit Score: 74.56 E-value: 3.58e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1667 VVSVTINPVNDAPVAVDDRITVSEKDNASFDLVANDTDVEGDRLTLISVAVAAVTGLALTSEQAAAAFSVVDGKLVVDPS 1746
Cdd:COG2931 9 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGDGGGGGGGGGGGGGGGGLDGGGGGGGGDGGGGGGGDDTD 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1747 SAFAALEDDQQAVVTLTYSVRDANGGEAHGTTTVTVDGYTEYTIVSGTDGNDVLVAGDGKDMLEGGDGNDTLLAGAGNDM 1826
Cdd:COG2931 89 GGGDGGDGGGGGTGDDTGDGGGGNDTLTGGDGNDTLTGGAGDDTLYGGAGNDTLTGGAGNDTLYGGAGNDTLYGGAGNDT 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1827 VDAGAGNDRVVAGDGNDIVEGGAGNDMLMGGAGNDVLHGGAGNDQLNGGSGDDTLIGGAGNDVLTGGSGADTFVFAAGSG 1906
Cdd:COG2931 169 LDGGAGNDTLTGGAGNDTLTGGAGNDTLDGGGGDDTLGGGGGDDGLDGGDGDDGLGGGGGDDTLGGGGGGDGGGGGGGDD 248
|
|
| Peptidase_M10_C |
pfam08548 |
Peptidase M10 serralysin C terminal; Serralysins are peptidases related to mammalian matrix ... |
1856-1927 |
1.04e-13 |
|
Peptidase M10 serralysin C terminal; Serralysins are peptidases related to mammalian matrix metallopeptidases (MMPs). The peptidase unit is found at the N terminal while this domain at the C terminal forms a corkscrew and is thought to be important for secretion of the protein through the bacterial cell wall. This domain contains the calcium ion binding domain pfam00353.
Pssm-ID: 430067 [Multi-domain] Cd Length: 222 Bit Score: 72.40 E-value: 1.04e-13
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 490580359 1856 GGAGNDVLHGGAGNDQLNGGSGDDTLIGGAGNDVLTGGSGADTFVFAAGS-----GRDVVTDFQAGADGKDVVELSK 1927
Cdd:pfam08548 86 GGSGNDVLIGNDADNILKGGAGNDILYGGGGADQLWGGAGNDIFVYASAKdsltaAPDTIRDFVSGIDKIDLSALNN 162
|
|
| COG2931 |
COG2931 |
Ca2+-binding protein, RTX toxin-related [Secondary metabolites biosynthesis, transport and ... |
1266-1409 |
3.08e-12 |
|
Ca2+-binding protein, RTX toxin-related [Secondary metabolites biosynthesis, transport and catabolism];
Pssm-ID: 442175 [Multi-domain] Cd Length: 252 Bit Score: 68.78 E-value: 3.08e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1266 DAGTFGLYSWGNKGLAFDNLTVVNLKSGLEAGTTINGTEARDTLVGTDADETIFGHGGNDRLIGNAGNDRLAGGDGNDVL 1345
Cdd:COG2931 45 GGGGGDGGGGGGGGGGGGGGGGLDGGGGGGGGDGGGGGGGDDTDGGGDGGDGGGGGTGDDTGDGGGGNDTLTGGDGNDTL 124
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 490580359 1346 MGGAGRDALSGGNGDDVLFGNEGNDIVSGGLGDDVIEGGTGNDLLLGGDGSDTYVYGRGDGSDD 1409
Cdd:COG2931 125 TGGAGDDTLYGGAGNDTLTGGAGNDTLYGGAGNDTLYGGAGNDTLDGGAGNDTLTGGAGNDTLT 188
|
|
| Cadherin_5 |
pfam17892 |
Cadherin-like domain; |
1581-1673 |
1.05e-11 |
|
Cadherin-like domain;
Pssm-ID: 436123 [Multi-domain] Cd Length: 98 Bit Score: 62.98 E-value: 1.05e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1581 VNDAPVAASIAV--KTDEDV--------VLKGkvvASDIDGDTLTFAiKADAGAAKGEVkIDAATGEWVYAPNANVNGTD 1650
Cdd:pfam17892 1 VNDAPVATGDVTlaTGTEDTpltitaaqLLAN---ATDVDGDTLSVT-NLTADAGHGTV-VDNGDGTYTFTPAANYNGPV 75
|
90 100
....*....|....*....|...
gi 490580359 1651 SFTVVVSDGKRGSAESVVSVTIN 1673
Cdd:pfam17892 76 SFTYTVSDGHGGTTTATASLTVT 98
|
|
| Big_9 |
pfam17963 |
Bacterial Ig domain; This entry represents a wide variety of bacterial Ig domains. |
1668-1771 |
1.48e-11 |
|
Bacterial Ig domain; This entry represents a wide variety of bacterial Ig domains.
Pssm-ID: 465590 [Multi-domain] Cd Length: 90 Bit Score: 62.36 E-value: 1.48e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1668 VSVTINPVNDAPVAVDDRITVSEKdnasfDLVANDTDVEGDRLTLISVAVAAVTGLALTSEQAAAafsvvDGKLVVDPSS 1747
Cdd:pfam17963 4 VTVTVTPVNDAPVAVDDSVTVTED-----TVLANDSDPDGDPLTITSLTVTIVTAPANGTVTVNA-----DGTLTYTPNA 73
|
90 100
....*....|....*....|....
gi 490580359 1748 AFAaleddqqAVVTLTYSVRDANG 1771
Cdd:pfam17963 74 GFS-------GTDSFTYTVSDGSG 90
|
|
| Cadherin_4 |
pfam17803 |
Bacterial cadherin-like domain; This entry contains numerous bacterial cadherin-like domains ... |
1668-1722 |
3.41e-11 |
|
Bacterial cadherin-like domain; This entry contains numerous bacterial cadherin-like domains found in extracelullar proteins.
Pssm-ID: 465514 [Multi-domain] Cd Length: 71 Bit Score: 60.66 E-value: 3.41e-11
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*..
gi 490580359 1668 VSVTINPVNDAPVAVDDRITVSEKDNASF--DLVANDTDVEGDRLTLISVAVAAVTG 1722
Cdd:pfam17803 3 VTITVTGVNDAPVAVDDTATVDEDTPVTItgNVLANDTDVDGDTLTVTSVTGAPAYG 59
|
|
| COG2931 |
COG2931 |
Ca2+-binding protein, RTX toxin-related [Secondary metabolites biosynthesis, transport and ... |
1292-1419 |
5.62e-11 |
|
Ca2+-binding protein, RTX toxin-related [Secondary metabolites biosynthesis, transport and catabolism];
Pssm-ID: 442175 [Multi-domain] Cd Length: 252 Bit Score: 64.93 E-value: 5.62e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1292 SGLEAGTTINGTEARDTLVGTDADETIFGHGGNDRLIGNAGNDRLAGGDGNDVLMGGAGRDALSGGNGDDVLFGNEGNDI 1371
Cdd:COG2931 125 TGGAGDDTLYGGAGNDTLTGGAGNDTLYGGAGNDTLYGGAGNDTLDGGAGNDTLTGGAGNDTLTGGAGNDTLDGGGGDDT 204
|
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 490580359 1372 VSGGLGDDVIEGGTGNDLLLGGDGSDTYVYGRGDGSDDIVETAGATGD 1419
Cdd:COG2931 205 LGGGGGDDGLDGGDGDDGLGGGGGDDTLGGGGGGDGGGGGGGDDGLGG 252
|
|
| Big_9 |
pfam17963 |
Bacterial Ig domain; This entry represents a wide variety of bacterial Ig domains. |
1484-1567 |
8.62e-11 |
|
Bacterial Ig domain; This entry represents a wide variety of bacterial Ig domains.
Pssm-ID: 465590 [Multi-domain] Cd Length: 90 Bit Score: 60.05 E-value: 8.62e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1484 VNRGPVAAADTlAAVDEDaasflisfaTLLANDKDADLDQLAVTGVSLV-----AGGTAVMEETG-IRFTTAADFNGTAS 1557
Cdd:pfam17963 11 VNDAPVAVDDS-VTVTED---------TVLANDSDPDGDPLTITSLTVTivtapANGTVTVNADGtLTYTPNAGFSGTDS 80
|
90
....*....|
gi 490580359 1558 FSYRITDGRG 1567
Cdd:pfam17963 81 FTYTVSDGSG 90
|
|
| myxo_dep_M36 |
NF038112 |
myxosortase-dependent M36 family metallopeptidase; Members of this bacterial protein family ... |
1582-1795 |
1.91e-10 |
|
myxosortase-dependent M36 family metallopeptidase; Members of this bacterial protein family have an M36 family metallopeptidase domain, like fungalysin (see PF02128), and a C-terminal MYXO-CTERM domain (see TIGR03901), suggesting processing and surface-anchoring by the still-unknown putative transpeptidase, myxosortase. Members of this family include MXAN_3564 (mepA), part of the effector cargo of outer membrane vesicles that the species produces in large numbers during predation on other microbes.
Pssm-ID: 468355 [Multi-domain] Cd Length: 1597 Bit Score: 66.60 E-value: 1.91e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1582 NDAPVA---ASIAVKTDEDVVLKGKVvASDIDGDTLTFAIKADAGAAKGEVKIDAATGEWVyAPNANVNGTDSFTVVVSD 1658
Cdd:NF038112 1185 NRRPVAnagPDQTVLERTTVTLNGSG-SFDPDGDPLTYAWTQVSGPAVTLTGADTATPSFT-APEVTADTVLTFQLVVSD 1262
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1659 GKRGSAESVVSVTINPVNDAPVA-------VDDRITVSekdnasfdLVANDTDVEGDRLTLISVAVAAVTgLALTSEQAA 1731
Cdd:NF038112 1263 GTKTSAPDTVTVLVRNVNRAPVAvagapatVDERSTVT--------LDGSGTDADGDALTYAWTQTSGPA-VTLTGATTA 1333
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 490580359 1732 -AAFSVVDGKLvvDPSSAFAALEDDQQAVV--TLTYSVRDANGGE-AHGTTTVTVDGYTEYTIV-SGTD 1795
Cdd:NF038112 1334 tATFTAPEVTA--DTQLTFTLTVSDGTASAtdTVTVTVRNVNRAPvANAGADQTVDERSTVTLSgSATD 1400
|
|
| Peptidase_M10_C |
pfam08548 |
Peptidase M10 serralysin C terminal; Serralysins are peptidases related to mammalian matrix ... |
1301-1407 |
1.41e-09 |
|
Peptidase M10 serralysin C terminal; Serralysins are peptidases related to mammalian matrix metallopeptidases (MMPs). The peptidase unit is found at the N terminal while this domain at the C terminal forms a corkscrew and is thought to be important for secretion of the protein through the bacterial cell wall. This domain contains the calcium ion binding domain pfam00353.
Pssm-ID: 430067 [Multi-domain] Cd Length: 222 Bit Score: 60.08 E-value: 1.41e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1301 NGTEARDTLVGTDADE----TIFGHGGND-----------RLIGNAGNDRLAGG-DGNDVLMGGAGRDALSGGNGDDVLF 1364
Cdd:pfam08548 15 NSNTGRDFYTATDASSklifSVWDAGGNDtfdfsgysqnqRINLNEGSFSDVGGlKGNVSIAHGVTIENAIGGSGNDVLI 94
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 490580359 1365 GNEGNDIVSGGLGDDVIEGGTGNDLLLGGDGSDTYVYGRGDGS 1407
Cdd:pfam08548 95 GNDADNILKGGAGNDILYGGGGADQLWGGAGNDIFVYASAKDS 137
|
|
| Cadherin_4 |
pfam17803 |
Bacterial cadherin-like domain; This entry contains numerous bacterial cadherin-like domains ... |
1572-1640 |
1.72e-09 |
|
Bacterial cadherin-like domain; This entry contains numerous bacterial cadherin-like domains found in extracelullar proteins.
Pssm-ID: 465514 [Multi-domain] Cd Length: 71 Bit Score: 55.65 E-value: 1.72e-09
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 490580359 1572 ATASFTVKPVNDAPVAASIAVKTDED--VVLKGKVVA--SDIDGDTLTFAIkADAGAAKGEVKIDaATGEWVY 1640
Cdd:pfam17803 1 ATVTITVTGVNDAPVAVDDTATVDEDtpVTITGNVLAndTDVDGDTLTVTS-VTGAPAYGTLTLN-ADGSFTY 71
|
|
| CpdA |
COG1409 |
3',5'-cyclic AMP phosphodiesterase CpdA [Signal transduction mechanisms]; |
344-574 |
3.88e-09 |
|
3',5'-cyclic AMP phosphodiesterase CpdA [Signal transduction mechanisms];
Pssm-ID: 441019 [Multi-domain] Cd Length: 234 Bit Score: 59.32 E-value: 3.88e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 344 YTIAVFPDTQdYTSNDGIKHLfgDMTQWLVDNRQSHNIVFMSHVGDITQNNQSSEWDIAESALRKLdgKLPYALLPGNHD 423
Cdd:COG1409 1 FRFAHISDLH-LGAPDGSDTA--EVLAAALADINAPRPDFVVVTGDLTDDGEPEEYAAAREILARL--GVPVYVVPGNHD 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 424 qgssgnaanhSSDQLDSRFSAAkqaatnagtFGGAYDQEqaaarnTYSTFTAP-------DGTKWLSISLEFGPRDdvIR 496
Cdd:COG1409 76 ----------IRAAMAEAYREY---------FGDLPPGG------LYYSFDYGgvrfiglDSNVPGRSSGELGPEQ--LA 128
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 490580359 497 WAGDVIEKFPDHRVMLATHsltsyagrqdnlaLPLYDEGAGydygmrTDQRGANDGEYVARvLLSRYpNIVMTFSGHI 574
Cdd:COG1409 129 WLEEELAAAPAKPVIVFLH-------------HPPYSTGSG------SDRIGLRNAEELLA-LLARY-GVDLVLSGHV 185
|
|
| COG2931 |
COG2931 |
Ca2+-binding protein, RTX toxin-related [Secondary metabolites biosynthesis, transport and ... |
1242-1405 |
2.21e-08 |
|
Ca2+-binding protein, RTX toxin-related [Secondary metabolites biosynthesis, transport and catabolism];
Pssm-ID: 442175 [Multi-domain] Cd Length: 252 Bit Score: 57.22 E-value: 2.21e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1242 IGDKITAFLNEEALFAYPIGDRELDAGTFGLYSWGNKGLAFDNLTVVNLKSGLEAGTTINGTEARDTLVGTDADETIFGH 1321
Cdd:COG2931 3 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGDGGGGGGGGGGGGGGGGLDGGGGGGGGDGGGGG 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1322 GGNDRLIGNAGNDRLAGGDGNDVLMGGAGRDALSGGNGDDVLFGNEGNDIVSGGLGDDVIEGGTGNDLLLGGDGSDTYVY 1401
Cdd:COG2931 83 GGDDTDGGGDGGDGGGGGTGDDTGDGGGGNDTLTGGDGNDTLTGGAGDDTLYGGAGNDTLTGGAGNDTLYGGAGNDTLYG 162
|
....
gi 490580359 1402 GRGD 1405
Cdd:COG2931 163 GAGN 166
|
|
| HemolysinCabind |
pfam00353 |
RTX calcium-binding nonapeptide repeat (4 copies); |
1855-1890 |
2.89e-08 |
|
RTX calcium-binding nonapeptide repeat (4 copies);
Pssm-ID: 459777 [Multi-domain] Cd Length: 36 Bit Score: 51.28 E-value: 2.89e-08
10 20 30
....*....|....*....|....*....|....*.
gi 490580359 1855 MGGAGNDVLHGGAGNDQLNGGSGDDTLIGGAGNDVL 1890
Cdd:pfam00353 1 YGGDGNDTLVGGAGNDTIYGGAGNDTLDGGAGNDTL 36
|
|
| HemolysinCabind |
pfam00353 |
RTX calcium-binding nonapeptide repeat (4 copies); |
1847-1881 |
3.52e-08 |
|
RTX calcium-binding nonapeptide repeat (4 copies);
Pssm-ID: 459777 [Multi-domain] Cd Length: 36 Bit Score: 50.90 E-value: 3.52e-08
10 20 30
....*....|....*....|....*....|....*
gi 490580359 1847 GGAGNDMLMGGAGNDVLHGGAGNDQLNGGSGDDTL 1881
Cdd:pfam00353 2 GGDGNDTLVGGAGNDTIYGGAGNDTLDGGAGNDTL 36
|
|
| HemolysinCabind |
pfam00353 |
RTX calcium-binding nonapeptide repeat (4 copies); |
1864-1899 |
1.69e-07 |
|
RTX calcium-binding nonapeptide repeat (4 copies);
Pssm-ID: 459777 [Multi-domain] Cd Length: 36 Bit Score: 48.97 E-value: 1.69e-07
10 20 30
....*....|....*....|....*....|....*.
gi 490580359 1864 HGGAGNDQLNGGSGDDTLIGGAGNDVLTGGSGADTF 1899
Cdd:pfam00353 1 YGGDGNDTLVGGAGNDTIYGGAGNDTLDGGAGNDTL 36
|
|
| Cadherin_5 |
pfam17892 |
Cadherin-like domain; |
1675-1783 |
2.95e-07 |
|
Cadherin-like domain;
Pssm-ID: 436123 [Multi-domain] Cd Length: 98 Bit Score: 50.27 E-value: 2.95e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1675 VNDAPVAVDDRITVSEKDNASF-----DLVANDTDVEGDRLTLISVAVAAVTGlALTSEQaaaafsvvDGKLVVDPssaf 1749
Cdd:pfam17892 1 VNDAPVATGDVTLATGTEDTPLtitaaQLLANATDVDGDTLSVTNLTADAGHG-TVVDNG--------DGTYTFTP---- 67
|
90 100 110
....*....|....*....|....*....|....
gi 490580359 1750 aalEDDQQAVVTLTYSVRDANGGEAHGTTTVTVD 1783
Cdd:pfam17892 68 ---AANYNGPVSFTYTVSDGHGGTTTATASLTVT 98
|
|
| HemolysinCabind |
pfam00353 |
RTX calcium-binding nonapeptide repeat (4 copies); |
1837-1872 |
9.01e-07 |
|
RTX calcium-binding nonapeptide repeat (4 copies);
Pssm-ID: 459777 [Multi-domain] Cd Length: 36 Bit Score: 47.05 E-value: 9.01e-07
10 20 30
....*....|....*....|....*....|....*.
gi 490580359 1837 VAGDGNDIVEGGAGNDMLMGGAGNDVLHGGAGNDQL 1872
Cdd:pfam00353 1 YGGDGNDTLVGGAGNDTIYGGAGNDTLDGGAGNDTL 36
|
|
| FhaB |
COG3210 |
Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, ... |
1296-1966 |
1.17e-06 |
|
Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 442443 [Multi-domain] Cd Length: 1698 Bit Score: 54.00 E-value: 1.17e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1296 AGTTINGTEARDTLVGTDADETIFGHGGNDRLIGNAGNDRLAGGDGNDVLMGGAGRDALSGGNGDDVLFGNEGNDIVSGG 1375
Cdd:COG3210 801 DGTITAAGTTAINVTGSGGTITINTATTGLTGTGDTTSGAGGSNTTDTTTGTTSDGASGGGTAGANSGSLAATAASITVG 880
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1376 LGDDVIEGGTGNDLLLGGDGSDTYVYGRGDGSDDIVETAGATGDKDVLVLHDIARNEAVLHKFGDNVEIEFGNGEKISLR 1455
Cdd:COG3210 881 SGGVATSTGTANAGTLTNLGTTTNAASGNGAVLATVTATGTGGGGLTGGNAAAGGTGAGNGTTALSGTQGNAGLSAASAS 960
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1456 NQLAGGGLELVTFADGTLLNRDAIVKGLVNRGPVAAADTLAAVDEDAASFLISFATLLANDKDADLDQLAVTGVSLVAGG 1535
Cdd:COG3210 961 DGAGDTGASSAAGSSAVGTSANSAGSTGGVIAATGILVAGNSGTTASTTGGSGAIVAGGNGVTGTTGTASATGTGTAATA 1040
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1536 TavmeeTGIRFTTAADFNGTASFSYRITDGRGGSSEATASFTVKPVNDAPVAASIAVKTDEDVVLKGKVVASDIDGDTLT 1615
Cdd:COG3210 1041 G-----GQNGVGVNASGISGGNAAALTASGTAGTTGGTAASNGGGGTAQASGAGTTHTLGGITNGGATGTSGGTTTSTGG 1115
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1616 FAIKADAGAAKGEVKIDAATGEWVYAPNANVNGTDSFTVVVSDGKRGSAESVVSVTINPVNDAPVAVDDRITVSEKDNAS 1695
Cdd:COG3210 1116 VTASKVGGTTTVGATGTSTASTEAAGAGTLTGLVAVSAVAGGASSASAGDTTAVAAATTTTTGSAINGGADSAATEGTAG 1195
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1696 FDLVANDTDVEGDRLTLISVAVAAVTGLALTSEQAAAAFSVVDGKLVVDPSSAFAALEDDQQAVVTLTYSVRDANGGEAH 1775
Cdd:COG3210 1196 TDLKGGDSTGGSTTTIGTTNVTTTTTLTASDTGNTTATGGSSAGQTGSFVAAGSASGTGDATTGATAGAVSNGATSTVAG 1275
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1776 GTTTVTVDGYTEYTIVSGTDGNDVLVAGDGKDMLEGGDGNDTLLAGAGNDMVDAGAGNDRVVAGDGNDIVEGGAGNDMLM 1855
Cdd:COG3210 1276 NAGATATGSTVDIGSTSATSAGGSLDTTGNTAGANGATVGTGIGGTTATGTAVAAVNSGGVNAGGGTINTTAANTGLNGG 1355
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1856 GGAGNDVLHGGAGNDQLNGGSGDDTLIGGAGNDVLTGGSGADTFVFAAGSGRDVVTDFQAGADGKDVVELSKDVFADYQA 1935
Cdd:COG3210 1356 NGATDSAAGAGSGGAAGSLAATAGAGTVLTGAGNNTGAEGTNAGRDGGVTTSGTGVGNNGGVSGTTVAGTTGSSATTGTG 1435
|
650 660 670
....*....|....*....|....*....|.
gi 490580359 1936 FIASGVFTDGDHGAEIAFKDGSTITFDGVKT 1966
Cdd:COG3210 1436 GTGNTTGTSVAGAGGGNADASAINTGNASSL 1466
|
|
| HemolysinCabind |
pfam00353 |
RTX calcium-binding nonapeptide repeat (4 copies); |
1356-1390 |
1.47e-06 |
|
RTX calcium-binding nonapeptide repeat (4 copies);
Pssm-ID: 459777 [Multi-domain] Cd Length: 36 Bit Score: 46.28 E-value: 1.47e-06
10 20 30
....*....|....*....|....*....|....*
gi 490580359 1356 GGNGDDVLFGNEGNDIVSGGLGDDVIEGGTGNDLL 1390
Cdd:pfam00353 2 GGDGNDTLVGGAGNDTIYGGAGNDTLDGGAGNDTL 36
|
|
| HemolysinCabind |
pfam00353 |
RTX calcium-binding nonapeptide repeat (4 copies); |
1828-1863 |
2.18e-06 |
|
RTX calcium-binding nonapeptide repeat (4 copies);
Pssm-ID: 459777 [Multi-domain] Cd Length: 36 Bit Score: 45.89 E-value: 2.18e-06
10 20 30
....*....|....*....|....*....|....*.
gi 490580359 1828 DAGAGNDRVVAGDGNDIVEGGAGNDMLMGGAGNDVL 1863
Cdd:pfam00353 1 YGGDGNDTLVGGAGNDTIYGGAGNDTLDGGAGNDTL 36
|
|
| HemolysinCabind |
pfam00353 |
RTX calcium-binding nonapeptide repeat (4 copies); |
1338-1372 |
2.73e-06 |
|
RTX calcium-binding nonapeptide repeat (4 copies);
Pssm-ID: 459777 [Multi-domain] Cd Length: 36 Bit Score: 45.51 E-value: 2.73e-06
10 20 30
....*....|....*....|....*....|....*
gi 490580359 1338 GGDGNDVLMGGAGRDALSGGNGDDVLFGNEGNDIV 1372
Cdd:pfam00353 2 GGDGNDTLVGGAGNDTIYGGAGNDTLDGGAGNDTL 36
|
|
| HemolysinCabind |
pfam00353 |
RTX calcium-binding nonapeptide repeat (4 copies); |
1328-1363 |
2.78e-06 |
|
RTX calcium-binding nonapeptide repeat (4 copies);
Pssm-ID: 459777 [Multi-domain] Cd Length: 36 Bit Score: 45.51 E-value: 2.78e-06
10 20 30
....*....|....*....|....*....|....*.
gi 490580359 1328 IGNAGNDRLAGGDGNDVLMGGAGRDALSGGNGDDVL 1363
Cdd:pfam00353 1 YGGDGNDTLVGGAGNDTIYGGAGNDTLDGGAGNDTL 36
|
|
| HemolysinCabind |
pfam00353 |
RTX calcium-binding nonapeptide repeat (4 copies); |
1346-1381 |
5.86e-06 |
|
RTX calcium-binding nonapeptide repeat (4 copies);
Pssm-ID: 459777 [Multi-domain] Cd Length: 36 Bit Score: 44.74 E-value: 5.86e-06
10 20 30
....*....|....*....|....*....|....*.
gi 490580359 1346 MGGAGRDALSGGNGDDVLFGNEGNDIVSGGLGDDVI 1381
Cdd:pfam00353 1 YGGDGNDTLVGGAGNDTIYGGAGNDTLDGGAGNDTL 36
|
|
| HemolysinCabind |
pfam00353 |
RTX calcium-binding nonapeptide repeat (4 copies); |
1319-1354 |
6.72e-06 |
|
RTX calcium-binding nonapeptide repeat (4 copies);
Pssm-ID: 459777 [Multi-domain] Cd Length: 36 Bit Score: 44.35 E-value: 6.72e-06
10 20 30
....*....|....*....|....*....|....*.
gi 490580359 1319 FGHGGNDRLIGNAGNDRLAGGDGNDVLMGGAGRDAL 1354
Cdd:pfam00353 1 YGGDGNDTLVGGAGNDTIYGGAGNDTLDGGAGNDTL 36
|
|
| HemolysinCabind |
pfam00353 |
RTX calcium-binding nonapeptide repeat (4 copies); |
1811-1845 |
1.09e-05 |
|
RTX calcium-binding nonapeptide repeat (4 copies);
Pssm-ID: 459777 [Multi-domain] Cd Length: 36 Bit Score: 43.97 E-value: 1.09e-05
10 20 30
....*....|....*....|....*....|....*
gi 490580359 1811 GGDGNDTLLAGAGNDMVDAGAGNDRVVAGDGNDIV 1845
Cdd:pfam00353 2 GGDGNDTLVGGAGNDTIYGGAGNDTLDGGAGNDTL 36
|
|
| HemolysinCabind |
pfam00353 |
RTX calcium-binding nonapeptide repeat (4 copies); |
1364-1398 |
1.31e-05 |
|
RTX calcium-binding nonapeptide repeat (4 copies);
Pssm-ID: 459777 [Multi-domain] Cd Length: 36 Bit Score: 43.58 E-value: 1.31e-05
10 20 30
....*....|....*....|....*....|....*
gi 490580359 1364 FGNEGNDIVSGGLGDDVIEGGTGNDLLLGGDGSDT 1398
Cdd:pfam00353 1 YGGDGNDTLVGGAGNDTIYGGAGNDTLDGGAGNDT 35
|
|
| Peptidase_M10_C |
pfam08548 |
Peptidase M10 serralysin C terminal; Serralysins are peptidases related to mammalian matrix ... |
1296-1355 |
2.06e-05 |
|
Peptidase M10 serralysin C terminal; Serralysins are peptidases related to mammalian matrix metallopeptidases (MMPs). The peptidase unit is found at the N terminal while this domain at the C terminal forms a corkscrew and is thought to be important for secretion of the protein through the bacterial cell wall. This domain contains the calcium ion binding domain pfam00353.
Pssm-ID: 430067 [Multi-domain] Cd Length: 222 Bit Score: 47.75 E-value: 2.06e-05
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 490580359 1296 AGTTIN---GTEARDTLVGTDADETIFGHGGNDRLIGNAGNDRLAGGDGNDVLMGGAGRDALS 1355
Cdd:pfam08548 77 HGVTIEnaiGGSGNDVLIGNDADNILKGGAGNDILYGGGGADQLWGGAGNDIFVYASAKDSLT 139
|
|
| HemolysinCabind |
pfam00353 |
RTX calcium-binding nonapeptide repeat (4 copies); |
1801-1836 |
3.43e-05 |
|
RTX calcium-binding nonapeptide repeat (4 copies);
Pssm-ID: 459777 [Multi-domain] Cd Length: 36 Bit Score: 42.42 E-value: 3.43e-05
10 20 30
....*....|....*....|....*....|....*.
gi 490580359 1801 VAGDGKDMLEGGDGNDTLLAGAGNDMVDAGAGNDRV 1836
Cdd:pfam00353 1 YGGDGNDTLVGGAGNDTIYGGAGNDTLDGGAGNDTL 36
|
|
| HemolysinCabind |
pfam00353 |
RTX calcium-binding nonapeptide repeat (4 copies); |
1793-1827 |
3.60e-05 |
|
RTX calcium-binding nonapeptide repeat (4 copies);
Pssm-ID: 459777 [Multi-domain] Cd Length: 36 Bit Score: 42.42 E-value: 3.60e-05
10 20 30
....*....|....*....|....*....|....*
gi 490580359 1793 GTDGNDVLVAGDGKDMLEGGDGNDTLLAGAGNDMV 1827
Cdd:pfam00353 2 GGDGNDTLVGGAGNDTIYGGAGNDTLDGGAGNDTL 36
|
|
| HemolysinCabind |
pfam00353 |
RTX calcium-binding nonapeptide repeat (4 copies); |
1310-1345 |
3.67e-05 |
|
RTX calcium-binding nonapeptide repeat (4 copies);
Pssm-ID: 459777 [Multi-domain] Cd Length: 36 Bit Score: 42.42 E-value: 3.67e-05
10 20 30
....*....|....*....|....*....|....*.
gi 490580359 1310 VGTDADETIFGHGGNDRLIGNAGNDRLAGGDGNDVL 1345
Cdd:pfam00353 1 YGGDGNDTLVGGAGNDTIYGGAGNDTLDGGAGNDTL 36
|
|
| HemolysinCabind |
pfam00353 |
RTX calcium-binding nonapeptide repeat (4 copies); |
1821-1854 |
5.12e-05 |
|
RTX calcium-binding nonapeptide repeat (4 copies);
Pssm-ID: 459777 [Multi-domain] Cd Length: 36 Bit Score: 42.04 E-value: 5.12e-05
10 20 30
....*....|....*....|....*....|....
gi 490580359 1821 GAGNDMVDAGAGNDRVVAGDGNDIVEGGAGNDML 1854
Cdd:pfam00353 3 GDGNDTLVGGAGNDTIYGGAGNDTLDGGAGNDTL 36
|
|
| Cadherin_4 |
pfam17803 |
Bacterial cadherin-like domain; This entry contains numerous bacterial cadherin-like domains ... |
1484-1543 |
1.07e-04 |
|
Bacterial cadherin-like domain; This entry contains numerous bacterial cadherin-like domains found in extracelullar proteins.
Pssm-ID: 465514 [Multi-domain] Cd Length: 71 Bit Score: 42.17 E-value: 1.07e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 490580359 1484 VNRGPVAAADTlAAVDEDAAsfLISFATLLANDKDADLDQLAVTGVSLVA-GGTAVMEETG 1543
Cdd:pfam17803 10 VNDAPVAVDDT-ATVDEDTP--VTITGNVLANDTDVDGDTLTVTSVTGAPaYGTLTLNADG 67
|
|
| MPP_1 |
cd07400 |
Uncharacterized subfamily, metallophosphatase domain; Uncharacterized subfamily of the MPP ... |
388-423 |
1.10e-04 |
|
Uncharacterized subfamily, metallophosphatase domain; Uncharacterized subfamily of the MPP superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Pssm-ID: 277345 [Multi-domain] Cd Length: 138 Bit Score: 44.21 E-value: 1.10e-04
10 20 30
....*....|....*....|....*....|....*.
gi 490580359 388 GDITQNNQSSEWDIAESALRKLDgKLPYALLPGNHD 423
Cdd:cd07400 38 GDLTQRARPAEFEEAREFLDALE-PEPVVVVPGNHD 72
|
|
| MPP_PAPs |
cd00839 |
purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain; ... |
364-428 |
1.29e-04 |
|
purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain; Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Pssm-ID: 277318 [Multi-domain] Cd Length: 296 Bit Score: 46.14 E-value: 1.29e-04
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 490580359 364 LFGDMTQWLVDNRQSH--------NIVFMSHVGDI----TQNNQSsEWDIAESALRKLDGKLPYALLPGNHDQGSSG 428
Cdd:cd00839 9 VFGDMGQNTNNSTNTLdhlekelgNYDAIIHVGDIayadGYNNGS-RWDTFMRQIEPLASYVPYMVAPGNHEADYNG 84
|
|
| HemolysinCabind |
pfam00353 |
RTX calcium-binding nonapeptide repeat (4 copies); |
1874-1910 |
2.07e-04 |
|
RTX calcium-binding nonapeptide repeat (4 copies);
Pssm-ID: 459777 [Multi-domain] Cd Length: 36 Bit Score: 40.11 E-value: 2.07e-04
10 20 30
....*....|....*....|....*....|....*..
gi 490580359 1874 GGSGDDTLIGGAGNDVLTGGSGADTFVfaAGSGRDVV 1910
Cdd:pfam00353 2 GGDGNDTLVGGAGNDTIYGGAGNDTLD--GGAGNDTL 36
|
|
| 3keto-disac_hyd |
pfam06439 |
3-keto-disaccharide hydrolase; This family has structural similarity to an endo-1,3-1,4-beta ... |
1157-1287 |
5.04e-04 |
|
3-keto-disaccharide hydrolase; This family has structural similarity to an endo-1,3-1,4-beta glucanase belonging to glycoside hydrolase family 16. A member containing this domain, BT2157 from B. thetaiotaomicron, hydrolyses 3-ketotrehalose during trehalose degradation that proceeds through a 3-keto-glycoside intermediate. Other members containing this domain are involved in disaccharide catabolism with 3-ketoglycoside intermediates.
Pssm-ID: 399445 Cd Length: 182 Bit Score: 43.13 E-value: 5.04e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1157 WTDYAIETTFQTPDKDGLGFLFRYKDSKN---YYKLELD-ADGILDRTPSNGAGSIFNlvrmrngieEILAQVPGKYEPG 1232
Cdd:pfam06439 50 FGDFELHLEFKITPGGNSGVFFRSQPEEGqdfVKGYEVQiLDSGGDLGLNRGTGSLYG---------EIAPSANATFPPG 120
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 490580359 1233 QDTKLRVEVIGDKITAFLN-------EEALFAYPIGDRELDAGTFGLYSWGNKgLAFDNLTV 1287
Cdd:pfam06439 121 EWNTYEIIVKGNRITVWLNgvlvvdfTDPDPETGGGGEPLKSGPIGLQDHGGE-VRFRNIRI 181
|
|
| VCBS_repeat |
TIGR01965 |
VCBS repeat; This domain of about 100 residues is found multiple (up to 35) copies in long ... |
1602-1693 |
8.05e-04 |
|
VCBS repeat; This domain of about 100 residues is found multiple (up to 35) copies in long proteins from several species of Vibrio, Colwellia, Bradyrhizobium, and Shewanella (hence the name VCBS) and in smaller copy numbers in proteins from several other bacteria. The large protein size and repeat copy numbers, species distribution, and suggested activities of several member proteins suggests a role for this domain in adhesion.
Pssm-ID: 273899 [Multi-domain] Cd Length: 99 Bit Score: 40.40 E-value: 8.05e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1602 GKVVASDID-GDTLTFAIKADAGAAkGEVKIDAaTGEWVYAPN----------ANVNGTDSFTVVVSDGkrgsAESVVSV 1670
Cdd:TIGR01965 2 GQLTISDADaGQAHFIAQTDAAGQY-GTFSIDA-DGQWTYQADnsqtavqalkAGETLTDTFTVTSADG----TSQTVTI 75
|
90 100
....*....|....*....|....
gi 490580359 1671 TINPVNDAPV-AVDDRITVSEKDN 1693
Cdd:TIGR01965 76 TITGANDAAViGGADTGSVTEDST 99
|
|
| HemolysinCabind |
pfam00353 |
RTX calcium-binding nonapeptide repeat (4 copies); |
1374-1405 |
1.23e-03 |
|
RTX calcium-binding nonapeptide repeat (4 copies);
Pssm-ID: 459777 [Multi-domain] Cd Length: 36 Bit Score: 38.19 E-value: 1.23e-03
10 20 30
....*....|....*....|....*....|..
gi 490580359 1374 GGLGDDVIEGGTGNDLLLGGDGSDTYVYGRGD 1405
Cdd:pfam00353 2 GGDGNDTLVGGAGNDTIYGGAGNDTLDGGAGN 33
|
|
| HemolysinCabind |
pfam00353 |
RTX calcium-binding nonapeptide repeat (4 copies); |
1302-1336 |
3.06e-03 |
|
RTX calcium-binding nonapeptide repeat (4 copies);
Pssm-ID: 459777 [Multi-domain] Cd Length: 36 Bit Score: 37.03 E-value: 3.06e-03
10 20 30
....*....|....*....|....*....|....*
gi 490580359 1302 GTEARDTLVGTDADETIFGHGGNDRLIGNAGNDRL 1336
Cdd:pfam00353 2 GGDGNDTLVGGAGNDTIYGGAGNDTLDGGAGNDTL 36
|
|
| tand_rpt_95 |
NF012211 |
tandem-95 repeat; This 95-amino acid repeat occurs in tandem in proteins that may be several ... |
1683-1782 |
3.87e-03 |
|
tandem-95 repeat; This 95-amino acid repeat occurs in tandem in proteins that may be several thousand amino acids long.
Pssm-ID: 333740 [Multi-domain] Cd Length: 98 Bit Score: 38.76 E-value: 3.87e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1683 DDRITVSEKDnasfdLVANDTDVEGDRLTLISVavaavtglaLTSEQAAAAFSVV-DGKLVVDPSSAFAaleddqqAVVT 1761
Cdd:NF012211 5 DGSITITQEQ-----LLANASDVDGDDLTVSNV---------SYSGPTNGTVTDNgDGTYTYTPNENFN-------GDDS 63
|
90 100
....*....|....*....|.
gi 490580359 1762 LTYSVRDANGGEAHGTTTVTV 1782
Cdd:NF012211 64 FTYTVSDGTGATATATVFVTV 84
|
|
| COG4625 |
COG4625 |
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function ... |
1459-1911 |
4.77e-03 |
|
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function unknown];
Pssm-ID: 443664 [Multi-domain] Cd Length: 900 Bit Score: 42.07 E-value: 4.77e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1459 AGGGLELVTFADGTLLNRDAIVKGLVNRGPVAAADTLAAVDEDAASFLISFATLLANDKDADLDQLAVTGVSLVAGGTAV 1538
Cdd:COG4625 67 GGGGGGGAGGGGGGGGGGGGGGGTGGVGGGGGGGGGGGGGGGGGGGGGGGGSAGGGGGGAGGAGGGGGGGAGGGGGGGGG 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1539 MEETGIRFTTAADFNGTASFSYRITDGRGGSSEATASFTVKPVNDAPVAASIAVKTDEDVVLKGKVVASDIDGDTLTFAI 1618
Cdd:COG4625 147 GGAGGGGGGGAGGAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGNGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGGGG 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1619 KADAGAAKGEVKIDAATGEWVYAPNANVNGTDSFTVVVSDGKRGSAESVVSVTINPVNDAPVAVDDRITVSEKDNASFDL 1698
Cdd:COG4625 227 GGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGNGGGGGAGGGGGGGGGGSGGGGGGGGGGGSGGGGGGGGGGGGGGGGGGG 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1699 VANDTDVEGDRLTLISVAVAAVTGLALTSEQAAAAFSVVDGKLVVDPSSAFAALEDDQQAVVTLTYSVRDANGGEAHGTT 1778
Cdd:COG4625 307 GGGGGGGGGGGGGGGGGGGGGGGGGGGAGGGGGSGGAGAGGGGAGGGGAGGGGGGGTGGGGGGGGGGGGGSGGGGAGGGG 386
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1779 TVTVDGYTEYTIVSGTDGNDVLVAGDGKDMLEGGDGNDTLLAGAGNDMVDAGAGNDRVVAGDGNDIVEGGAGNDMLMGGA 1858
Cdd:COG4625 387 GSGGGGGGGAGGGGGGGGAGGTGGGGAGGGGGAAGGGGGGTGAGGGGGGGGTGAGGGGATGGGGGGGGGAGGSGGGAGAG 466
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 490580359 1859 GNDVLHGGAGNDQLNGGSGDDTLIGGAGNDVLTGGSGADTFVFAAGSGRDVVT 1911
Cdd:COG4625 467 GGSGSGAGTLTLTGNNTYTGTTTVNGGGNYTQSAGSTLAVEVDAANSDRLVVT 519
|
|
| FhaB |
COG3210 |
Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, ... |
1347-1973 |
7.48e-03 |
|
Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 442443 [Multi-domain] Cd Length: 1698 Bit Score: 41.68 E-value: 7.48e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1347 GGAGRDALSGGNGDDVLFGNEGNDIVSGGLGDDVIEGGTGNDLLLGGDGSdtyvyGRGDGSDDIVETAGATGDKDVLVLH 1426
Cdd:COG3210 779 GNTSAGATLDNAGAEISIDITADGTITAAGTTAINVTGSGGTITINTATT-----GLTGTGDTTSGAGGSNTTDTTTGTT 853
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1427 DIARNEAVLHKFGDNVEIEFGNGEKISLRNQLAGGGLELVTFADGTLLNRDAIVKGLVNRGPVAAADTLAAVDEDAASFL 1506
Cdd:COG3210 854 SDGASGGGTAGANSGSLAATAASITVGSGGVATSTGTANAGTLTNLGTTTNAASGNGAVLATVTATGTGGGGLTGGNAAA 933
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1507 ISFATLLANDKDADLDQLAVTGVSLVAGGTAVMEETGIRFTTAADFNGTASFSYRITDGRGGSSEATASFTVKPVNDAPV 1586
Cdd:COG3210 934 GGTGAGNGTTALSGTQGNAGLSAASASDGAGDTGASSAAGSSAVGTSANSAGSTGGVIAATGILVAGNSGTTASTTGGSG 1013
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1587 AASIAVKTDEDVVLKGKVVASDIDGDTLTFAIKADAGAAKGEVKIDAATGEWVYAPNANVNGTDSFTVVVSDGKRGSAES 1666
Cdd:COG3210 1014 AIVAGGNGVTGTTGTASATGTGTAATAGGQNGVGVNASGISGGNAAALTASGTAGTTGGTAASNGGGGTAQASGAGTTHT 1093
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1667 VVSVTINPVNDAPVAVDDRITVSEKDNASFDLVANDTDVEGDRLTLISVAVAAVTGLALTSEQAAAAFSVVDGKLVVDPS 1746
Cdd:COG3210 1094 LGGITNGGATGTSGGTTTSTGGVTASKVGGTTTVGATGTSTASTEAAGAGTLTGLVAVSAVAGGASSASAGDTTAVAAAT 1173
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1747 SAFAALEDDQQAVVTLTYSVRDANGGEAHGTTTVTVDGYTEYTIVSGTDGNDVLVAGDGKDMLEGGDGNDTLLAGAGNDM 1826
Cdd:COG3210 1174 TTTTGSAINGGADSAATEGTAGTDLKGGDSTGGSTTTIGTTNVTTTTTLTASDTGNTTATGGSSAGQTGSFVAAGSASGT 1253
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1827 VDAGAGNDRVVAGDGNDIVEGGAGNDMLMGGAGNDVLHGGAGNDQLNGGSGDDTLIGGAGNDVLTGGSGADTFVFAAGSG 1906
Cdd:COG3210 1254 GDATTGATAGAVSNGATSTVAGNAGATATGSTVDIGSTSATSAGGSLDTTGNTAGANGATVGTGIGGTTATGTAVAAVNS 1333
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 490580359 1907 RDVVTDFQAGADGKDVVELSKDVFADYQAFIASGVFTDGDHGAEIAFKDGSTITFDGVKTEQFVIDD 1973
Cdd:COG3210 1334 GGVNAGGGTINTTAANTGLNGGNGATDSAAGAGSGGAAGSLAATAGAGTVLTGAGNNTGAEGTNAGR 1400
|
|
| COG2931 |
COG2931 |
Ca2+-binding protein, RTX toxin-related [Secondary metabolites biosynthesis, transport and ... |
1267-1405 |
7.66e-03 |
|
Ca2+-binding protein, RTX toxin-related [Secondary metabolites biosynthesis, transport and catabolism];
Pssm-ID: 442175 [Multi-domain] Cd Length: 252 Bit Score: 40.27 E-value: 7.66e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490580359 1267 AGTFGLYSWGNKGLAFDNLTVVNLKSGLEAGTTINGTEARDTLVGTDADETIFGHGGNDRLIGNAGNDRLAGGDGNDVLM 1346
Cdd:COG2931 1 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGDGGGGGGGGGGGGGGGGLDGGGGGGGGDGGG 80
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*....
gi 490580359 1347 GGAGRDALSGGNGDDVLFGNEGNDIVSGGLGDDVIEGGTGNDLLLGGDGSDTYVYGRGD 1405
Cdd:COG2931 81 GGGGDDTDGGGDGGDGGGGGTGDDTGDGGGGNDTLTGGDGNDTLTGGAGDDTLYGGAGN 139
|
|
| |
